ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl44g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY888045.1| Triticum aestivum delta 1-pyrroline-5-carboxylate... 238 9e-60
2dbj|AB193551.1| Triticum aestivum WP5CS mRNA for delta1-pyrrolin... 230 2e-57
3dbj|AK102633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 6e-27
4dbj|AK101985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 6e-27
5dbj|D49714.1| Oryza sativa mRNA for deltal-pyrroline-5-carboxyla... 129 6e-27
6gb|AY574031.1| Oryza sativa (japonica cultivar-group) delta-1-py... 123 4e-25
7gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome... 88 2e-14
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
10dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
11ref|NM_190603.1| Oryza sativa (japonica cultivar-group), predic... 58 2e-05
12dbj|AK101230.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
13dbj|AK069425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
14gb|AY492005.1| Glycine max delta-pyrroline-5-carboxylate synthet... 48 0.018
15emb|CR937050.2| Rattus norvegicus chromosome 5 BAC CH230-339J16,... 46 0.072
16emb|AL031664.1|HS531H16 Human DNA sequence from clone RP4-531H16... 42 1.1
17gb|AC159820.2| Mus musculus BAC clone RP23-158K20 from chromosom... 42 1.1
18emb|BX465867.24| Zebrafish DNA sequence from clone DKEYP-24D6 in... 42 1.1
19gb|AF121864.2| Streptomyces chattanoogensis xylanase-arabinofura... 42 1.1
20gb|AC025508.7|AC025508 Homo sapiens, clone RP11-659A24, complete... 42 1.1
21gb|AC010083.5|AC010083 Homo sapiens BAC clone RP11-125L14 from 2... 42 1.1
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
23gb|AC011194.15|AC011194 Mus musculus chromosome 11, clone RP23-1... 42 1.1
24gb|AC009238.4| Homo sapiens BAC clone RP11-468G5 from 2, complet... 42 1.1
25dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
26dbj|AK120604.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
27dbj|AK102614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
28gb|AC156031.2| Mus musculus BAC clone RP24-531B21 from 9, comple... 42 1.1
29emb|AJ006441.1|IPO6441 Idesia polycarpa 18S, 5.8S and 28S rRNA g... 42 1.1
30emb|AL606824.13| Mouse DNA sequence from clone RP23-9G13 on chro... 42 1.1
31gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 4.4
32ref|NM_184125.2| Oryza sativa (japonica cultivar-group), mRNA 40 4.4
33gb|AC121879.3| Mus musculus chromosome 19 clone RP24-132B24, com... 40 4.4
34gb|DQ217771.1| Salix matsudana isolate HLJ 18S ribosomal RNA gen... 40 4.4
35gb|AC161492.4| Mus musculus chromosome 18, clone RP24-154C3, com... 40 4.4
36gb|AC161872.7| Mus musculus BAC clone RP24-88E7 from chromosome ... 40 4.4
37gb|DQ443125.1| Bombyx mori aspartate aminotransferase mRNA, comp... 40 4.4
38gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 4.4
39gb|AC122813.3| Mus musculus BAC clone RP23-230L15 from 14, compl... 40 4.4
40gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, com... 40 4.4
41emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 4.4
42emb|CR855273.7| Zebrafish DNA sequence from clone DKEYP-34E1 in ... 40 4.4
43emb|AL646046.8| Mouse DNA sequence from clone RP23-101M12 on chr... 40 4.4
44gb|AC010271.8| Homo sapiens chromosome 19 clone CTC-492K19, comp... 40 4.4
45gb|AC118344.2| Homo sapiens chromosome 19 clone CTC-425O23, comp... 40 4.4
46ref|NM_170475.1| Drosophila melanogaster CG15530-RB, transcript ... 40 4.4
47ref|NM_143520.1| Drosophila melanogaster CG15530-RA, transcript ... 40 4.4
48gb|AC025370.12| Homo sapiens chromosome 8, clone RP11-318M2, com... 40 4.4
49gb|AY075264.1| Drosophila melanogaster AT23209 full length cDNA 40 4.4
50gb|AE008683.1|AE008683 Mus musculus T-cell receptor alpha/delta ... 40 4.4
51gb|AC009733.5|AC009733 Drosophila melanogaster, chromosome 3R, r... 40 4.4
52gb|AC158591.2| Pan troglodytes BAC clone CH251-526G18 from chrom... 40 4.4
53dbj|AB096873.1| Salix reinii genes for 18S rRNA, ITS1, 5.8S rRNA... 40 4.4
54dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
55dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
56gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal pro... 40 4.4
57dbj|AK070385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
58gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 11... 40 4.4
59gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 40 4.4
60gb|AC117728.10| Mus musculus chromosome 6, clone RP24-126C21, co... 40 4.4
61dbj|AP005855.2| Homo sapiens genomic DNA, chromosome 8q22, clone... 40 4.4
62gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols c... 40 4.4
63gb|AC005403.1|AC005403 Mus musculus clone UWGC:ma53a068 from 14D... 40 4.4
64emb|AJ006436.1|CBR6436 Chosenia bracteosa 18S, 5.8S and 28S rRNA... 40 4.4
65emb|AJ006435.1|SVI6435 Salix viminalis 18S, 5.8S and 28S rRNA ge... 40 4.4
66emb|AJ006434.1|STR6434 Salix triandra 18S, 5.8S and 28S rRNA gen... 40 4.4
67emb|AJ006433.1|SSC6433 Salix schwerinii 18S, 5.8S and 28S rRNA g... 40 4.4
68emb|AJ006432.1|SSE6432 Salix serpyllifolia 18S, 5.8S and 28S rRN... 40 4.4
69emb|AJ006431.1|SRE6431 Salix retusa 18S, 5.8S and 28S rRNA genes... 40 4.4
70emb|AJ006430.1|SPU6430 Salix purpurea 18S, 5.8S and 28S rRNA gen... 40 4.4
71emb|AJ006429.1|SPE6429 Salix pentandra 18S, 5.8S and 28S rRNA ge... 40 4.4
72emb|AJ006428.1|SHE6428 Salix herbacea 18S, 5.8S and 28S rRNA gen... 40 4.4
73emb|AJ006427.1|SFR6427 Salix fragilis 18S, 5.8S and 28S rRNA gen... 40 4.4
74emb|AJ006426.1|SEX6426 Salix exigua 18S, 5.8S and 28S rRNA genes... 40 4.4
75emb|AJ006425.1|SDA6425 Salix dasyclados 18S, 5.8S and 28S rRNA g... 40 4.4
76emb|AJ006424.1|SAM6424 Salix amygdaloides 18S, 5.8S and 28S rRNA... 40 4.4 
>gb|AY888045.1| Triticum aestivum delta 1-pyrroline-5-carboxylate synthetase mRNA,
           complete cds
          Length = 2260

 Score =  238 bits (120), Expect = 9e-60
 Identities = 138/144 (95%)
 Strand = Plus / Plus

                                                                       
Query: 189 gcccgcggccatggccagcgccgaccccaaccggagcttcatcaaggacgtgaagcgcat 248
           |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 99  gcccgcggccatggccggcgccgaccccaaccggagcttcatgaaggacgtgaagcgcat 158

                                                                       
Query: 249 cataatcaaggtgggtactgcagttatcaccagaaatgatggaagattggctttgggcag 308
           ||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 159 catcatcaaggtgggcactgcagttatcaccagaaatgatggaagactggctttgggcag 218

                                   
Query: 309 gattggatccctgtgcgagcaggt 332
           ||||||| ||||||||||||||||
Sbjct: 219 gattggagccctgtgcgagcaggt 242



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gagaggcggcgcgccgagcc 187
           ||||||||||||||||||||
Sbjct: 65  gagaggcggcgcgccgagcc 84
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>dbj|AB193551.1| Triticum aestivum WP5CS mRNA for delta1-pyrroline-5-carboxylate
           synthetase, complete cds
          Length = 2405

 Score =  230 bits (116), Expect = 2e-57
 Identities = 137/144 (95%)
 Strand = Plus / Plus

                                                                       
Query: 189 gcccgcggccatggccagcgccgaccccaaccggagcttcatcaaggacgtgaagcgcat 248
           |||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 73  gcccgcggccatggccggcgccgaccccaaccggagctccatgaaggacgtgaagcgcat 132

                                                                       
Query: 249 cataatcaaggtgggtactgcagttatcaccagaaatgatggaagattggctttgggcag 308
           ||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 133 catcatcaaggtgggcactgcagttatcaccagaaatgatggaagactggctttgggcag 192

                                   
Query: 309 gattggatccctgtgcgagcaggt 332
           ||||||| ||||||||||||||||
Sbjct: 193 gattggagccctgtgcgagcaggt 216
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>dbj|AK102633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099M14, full
           insert sequence
          Length = 2767

 Score =  129 bits (65), Expect = 6e-27
 Identities = 119/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 196 gccatggccagcgccgaccccaaccggagcttcatcaaggacgtgaagcgcatcataatc 255
           |||||||| |||| ||||||   |||||||||| | | ||||||||||||| |||| |||
Sbjct: 116 gccatggcgagcgtcgacccgtcccggagcttcgtgagggacgtgaagcgcgtcatcatc 175

                                                                       
Query: 256 aaggtgggtactgcagttatcaccagaaatgatggaagattggctttgggcaggattgga 315
           |||||||| ||||||||| || ||||| | |||||||||||||||||||||||| |||||
Sbjct: 176 aaggtgggcactgcagttgtctccagacaagatggaagattggctttgggcagggttgga 235

                            
Query: 316 tccctgtgcgagcaggt 332
            | ||||||||||||||
Sbjct: 236 gctctgtgcgagcaggt 252
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>dbj|AK101985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033078N24, full
           insert sequence
          Length = 1821

 Score =  129 bits (65), Expect = 6e-27
 Identities = 119/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 196 gccatggccagcgccgaccccaaccggagcttcatcaaggacgtgaagcgcatcataatc 255
           |||||||| |||| ||||||   |||||||||| | | ||||||||||||| |||| |||
Sbjct: 116 gccatggcgagcgtcgacccgtcccggagcttcgtgagggacgtgaagcgcgtcatcatc 175

                                                                       
Query: 256 aaggtgggtactgcagttatcaccagaaatgatggaagattggctttgggcaggattgga 315
           |||||||| ||||||||| || ||||| | |||||||||||||||||||||||| |||||
Sbjct: 176 aaggtgggcactgcagttgtctccagacaagatggaagattggctttgggcagggttgga 235

                            
Query: 316 tccctgtgcgagcaggt 332
            | ||||||||||||||
Sbjct: 236 gctctgtgcgagcaggt 252
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>dbj|D49714.1| Oryza sativa mRNA for deltal-pyrroline-5-carboxylate synthetase,
           complete cds
          Length = 2549

 Score =  129 bits (65), Expect = 6e-27
 Identities = 119/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 196 gccatggccagcgccgaccccaaccggagcttcatcaaggacgtgaagcgcatcataatc 255
           |||||||| |||| ||||||   |||||||||| | | ||||||||||||| |||| |||
Sbjct: 96  gccatggcgagcgtcgacccgtcccggagcttcgtgagggacgtgaagcgcgtcatcatc 155

                                                                       
Query: 256 aaggtgggtactgcagttatcaccagaaatgatggaagattggctttgggcaggattgga 315
           |||||||| ||||||||| || ||||| | |||||||||||||||||||||||| |||||
Sbjct: 156 aaggtgggcactgcagttgtctccagacaagatggaagattggctttgggcagggttgga 215

                            
Query: 316 tccctgtgcgagcaggt 332
            | ||||||||||||||
Sbjct: 216 gctctgtgcgagcaggt 232
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>gb|AY574031.1| Oryza sativa (japonica cultivar-group)
           delta-1-pyrroline-5-carboxylate synthetase (P5CS) mRNA,
           complete cds
          Length = 2151

 Score =  123 bits (62), Expect = 4e-25
 Identities = 101/114 (88%)
 Strand = Plus / Plus

                                                                       
Query: 219 ccggagcttcatcaaggacgtgaagcgcatcataatcaaggtgggtactgcagttatcac 278
           |||||||||| | | ||||||||||||| |||| ||||||||||| ||||||||| || |
Sbjct: 21  ccggagcttcgtgagggacgtgaagcgcgtcatcatcaaggtgggcactgcagttgtctc 80

                                                                 
Query: 279 cagaaatgatggaagattggctttgggcaggattggatccctgtgcgagcaggt 332
           |||| | |||||||||||||||||||||||| ||||| | ||||||||||||||
Sbjct: 81  cagacaagatggaagattggctttgggcagggttggagctctgtgcgagcaggt 134
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>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06,
             complete sequence
          Length = 145323

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                         
Query: 257   aggtgggtactgcagttatcaccagaaatgatggaagattggctttgggcaggattggat 316
             ||||||| ||||||||| || ||||| | |||||||||||||||||||||||| ||||| 
Sbjct: 77971 aggtgggcactgcagttgtctccagacaagatggaagattggctttgggcagggttggag 77912

                             
Query: 317   ccctgtgcgagcaggt 332
             | ||||||||||||||
Sbjct: 77911 ctctgtgcgagcaggt 77896



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                         
Query: 196   gccatggccagcgccgaccccaaccggagcttcatcaaggacgtgaagcgcatcataatc 255
             |||||||| |||| ||||||   |||||||||| | | ||||||||||||| |||| |||
Sbjct: 78825 gccatggcgagcgtcgacccgtcccggagcttcgtgagggacgtgaagcgcgtcatcatc 78766

                   
Query: 256   aaggtg 261
             ||||||
Sbjct: 78765 aaggtg 78760
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                            
Query: 257      aggtgggtactgcagttatcaccagaaatgatggaagattggctttgggcaggattggat 316
                ||||||| ||||||||| || ||||| | |||||||||||||||||||||||| ||||| 
Sbjct: 22234706 aggtgggcactgcagttgtctccagacaagatggaagattggctttgggcagggttggag 22234647

                                
Query: 317      ccctgtgcgagcaggt 332
                | ||||||||||||||
Sbjct: 22234646 ctctgtgcgagcaggt 22234631



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                            
Query: 196      gccatggccagcgccgaccccaaccggagcttcatcaaggacgtgaagcgcatcataatc 255
                |||||||| |||| ||||||   |||||||||| | | ||||||||||||| |||| |||
Sbjct: 22235560 gccatggcgagcgtcgacccgtcccggagcttcgtgagggacgtgaagcgcgtcatcatc 22235501

                      
Query: 256      aaggtg 261
                ||||||
Sbjct: 22235500 aaggtg 22235495
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 224      gcttcatcaaggacgtgaagcgcatcataatcaaggtg 261
                ||||| |||||||||||||||||||||| |||||||||
Sbjct: 36424508 gcttcgtcaaggacgtgaagcgcatcatcatcaaggtg 36424545



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 87      tccctctcctctctctctga 106
               ||||||||||||||||||||
Sbjct: 1073793 tccctctcctctctctctga 1073812
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>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0005H10
          Length = 142885

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 224   gcttcatcaaggacgtgaagcgcatcataatcaaggtg 261
             ||||| |||||||||||||||||||||| |||||||||
Sbjct: 76347 gcttcgtcaaggacgtgaagcgcatcatcatcaaggtg 76384
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>ref|NM_190603.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2208

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 224 gcttcatcaaggacgtgaagcgcatcataatcaaggt 260
           ||||| |||||||||||||||||||||| ||||||||
Sbjct: 83  gcttcgtcaaggacgtgaagcgcatcatcatcaaggt 119
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>dbj|AK101230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031H21, full
           insert sequence
          Length = 2739

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 224 gcttcatcaaggacgtgaagcgcatcataatcaaggt 260
           ||||| |||||||||||||||||||||| ||||||||
Sbjct: 273 gcttcgtcaaggacgtgaagcgcatcatcatcaaggt 309
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>dbj|AK069425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019K03, full
           insert sequence
          Length = 3386

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 224 gcttcatcaaggacgtgaagcgcatcataatcaaggt 260
           ||||| |||||||||||||||||||||| ||||||||
Sbjct: 217 gcttcgtcaaggacgtgaagcgcatcatcatcaaggt 253
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>gb|AY492005.1| Glycine max delta-pyrroline-5-carboxylate synthetase (P5CS) mRNA,
           complete cds
          Length = 2148

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 230 tcaaggacgtgaagcgcatcataatcaaggtgggtactgc 269
           ||||||| || |||||||||||||||||||| || |||||
Sbjct: 32  tcaaggatgttaagcgcatcataatcaaggttgggactgc 71
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>emb|CR937050.2| Rattus norvegicus chromosome 5 BAC CH230-339J16, complete sequence
          Length = 163260

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 82     ctctatccctctcctctctctct 104
              |||||||||||||||||||||||
Sbjct: 126585 ctctatccctctcctctctctct 126563
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>emb|AL031664.1|HS531H16 Human DNA sequence from clone RP4-531H16 on chromosome 20p11.22-12
             Contains the 3' end of the PCSK2 gene for proprotein
             convertase subtilisin/kexin type 2, the BFSP1 gene for
             beaded filament structural protein 1 (filensin), the
             TCTE1P gene for t-complex-associated-testis-expressed 1
             pseudogene, the  RPS27AP2 gene for ribosomal protein S27a
             pseudogene 2 and a CpG island, complete sequence
          Length = 155116

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 82    ctctatccctctcctctctctctgacctc 110
             |||| ||||||||||||||||||| ||||
Sbjct: 35411 ctctctccctctcctctctctctgtcctc 35439
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>gb|AC159820.2| Mus musculus BAC clone RP23-158K20 from chromosome 9, complete sequence
          Length = 215017

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 80     ggctctatccctctcctctctctct 104
              ||||||||| |||||||||||||||
Sbjct: 206262 ggctctatctctctcctctctctct 206286
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>emb|BX465867.24| Zebrafish DNA sequence from clone DKEYP-24D6 in linkage group 11,
             complete sequence
          Length = 170425

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 98    tctctctgacctccccacaca 118
             |||||||||||||||||||||
Sbjct: 11314 tctctctgacctccccacaca 11294
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>gb|AF121864.2| Streptomyces chattanoogensis xylanase-arabinofuranosidase
            bifunctional enzyme (xyl23) gene, complete cds
          Length = 4777

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 179  cgccgagcctgcccgcggcca 199
            |||||||||||||||||||||
Sbjct: 1747 cgccgagcctgcccgcggcca 1727
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>gb|AC025508.7|AC025508 Homo sapiens, clone RP11-659A24, complete sequence
          Length = 193598

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 86    atccctctcctctctctctgacctc 110
             ||||||||||||||||||| |||||
Sbjct: 50345 atccctctcctctctctctcacctc 50369
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>gb|AC010083.5|AC010083 Homo sapiens BAC clone RP11-125L14 from 2, complete sequence
          Length = 200936

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 82     ctctatccctctcctctctctctgacctc 110
              |||| ||||||||||||||||||| ||||
Sbjct: 112288 ctctctccctctcctctctctctgtcctc 112260
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 191      ccgcggccatggccagcgccg 211
                |||||||||||||||||||||
Sbjct: 11330464 ccgcggccatggccagcgccg 11330444
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>gb|AC011194.15|AC011194 Mus musculus chromosome 11, clone RP23-196F5, complete sequence
          Length = 181320

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 98     tctctctgacctccccacaca 118
              |||||||||||||||||||||
Sbjct: 154543 tctctctgacctccccacaca 154523
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>gb|AC009238.4| Homo sapiens BAC clone RP11-468G5 from 2, complete sequence
          Length = 202361

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 96     tctctctctgacctccccaca 116
              |||||||||||||||||||||
Sbjct: 142205 tctctctctgacctccccaca 142225
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>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1386G10
          Length = 121827

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 191   ccgcggccatggccagcgccg 211
             |||||||||||||||||||||
Sbjct: 18173 ccgcggccatggccagcgccg 18153
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>dbj|AK120604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150B18, full
            insert sequence
          Length = 1871

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 191  ccgcggccatggccagcgccg 211
            |||||||||||||||||||||
Sbjct: 1165 ccgcggccatggccagcgccg 1185
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>dbj|AK102614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099D18, full
            insert sequence
          Length = 1868

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 191  ccgcggccatggccagcgccg 211
            |||||||||||||||||||||
Sbjct: 1165 ccgcggccatggccagcgccg 1185
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>gb|AC156031.2| Mus musculus BAC clone RP24-531B21 from 9, complete sequence
          Length = 169736

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 80     ggctctatccctctcctctctctct 104
              ||||||||| |||||||||||||||
Sbjct: 157530 ggctctatctctctcctctctctct 157506
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>emb|AJ006441.1|IPO6441 Idesia polycarpa 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 5   cggggttcgttggcgagccgc 25
           |||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccgc 137
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>emb|AL606824.13| Mouse DNA sequence from clone RP23-9G13 on chromosome 11, complete
             sequence
          Length = 247743

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 98    tctctctgacctccccacaca 118
             |||||||||||||||||||||
Sbjct: 53800 tctctctgacctccccacaca 53780
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    catggccagcgccgacccca 217
              ||||||||||||||||||||
Sbjct: 145137 catggccagcgccgacccca 145118
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>ref|NM_184125.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2089

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  tccctctcctctctctctga 106
           ||||||||||||||||||||
Sbjct: 39  tccctctcctctctctctga 20
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>gb|AC121879.3| Mus musculus chromosome 19 clone RP24-132B24, complete sequence
          Length = 134662

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 80    ggctctatccctctcctctctctc 103
             |||||| |||||||||||||||||
Sbjct: 87403 ggctctctccctctcctctctctc 87426
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>gb|DQ217771.1| Salix matsudana isolate HLJ 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 709

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 189 cggggttcgttggcgagccg 170
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>gb|AC161492.4| Mus musculus chromosome 18, clone RP24-154C3, complete sequence
          Length = 171766

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    ctctatccctctcctctctctctg 105
             ||||||||||||||||||| ||||
Sbjct: 73419 ctctatccctctcctctctttctg 73396
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>gb|AC161872.7| Mus musculus BAC clone RP24-88E7 from chromosome 14, complete sequence
          Length = 226399

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    cagttatcaccagaaatgat 288
              ||||||||||||||||||||
Sbjct: 170166 cagttatcaccagaaatgat 170147
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>gb|DQ443125.1| Bombyx mori aspartate aminotransferase mRNA, complete cds
          Length = 1636

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 gtgcggcgacgaggcgacgg 144
           ||||||||||||||||||||
Sbjct: 980 gtgcggcgacgaggcgacgg 999
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 177     cgcgccgagcctgcccgcgg 196
               ||||||||||||||||||||
Sbjct: 1641927 cgcgccgagcctgcccgcgg 1641908
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>gb|AC122813.3| Mus musculus BAC clone RP23-230L15 from 14, complete sequence
          Length = 221468

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   cagttatcaccagaaatgat 288
             ||||||||||||||||||||
Sbjct: 59438 cagttatcaccagaaatgat 59419
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>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence
          Length = 218079

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 80    ggctctatccctctcctctctctc 103
             |||||| |||||||||||||||||
Sbjct: 10658 ggctctctccctctcctctctctc 10681
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 174     cggcgcgccgagcctgcccg 193
               ||||||||||||||||||||
Sbjct: 1172334 cggcgcgccgagcctgcccg 1172315
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>emb|CR855273.7| Zebrafish DNA sequence from clone DKEYP-34E1 in linkage group 24,
              complete sequence
          Length = 161081

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    ggtactgcagttatcaccag 281
              ||||||||||||||||||||
Sbjct: 129214 ggtactgcagttatcaccag 129195
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>emb|AL646046.8| Mouse DNA sequence from clone RP23-101M12 on chromosome 11, complete
              sequence
          Length = 214665

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ctctatccctctcctctctc 101
              ||||||||||||||||||||
Sbjct: 114828 ctctatccctctcctctctc 114809
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>gb|AC010271.8| Homo sapiens chromosome 19 clone CTC-492K19, complete sequence
          Length = 160643

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 88    ccctctcctctctctctgacctcc 111
             |||||||||||||| |||||||||
Sbjct: 47067 ccctctcctctctcactgacctcc 47044
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>gb|AC118344.2| Homo sapiens chromosome 19 clone CTC-425O23, complete sequence
          Length = 178335

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    ccctctcctctctctctgacctcc 111
             |||||||||||||| |||||||||
Sbjct: 16764 ccctctcctctctcactgacctcc 16787
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>ref|NM_170475.1| Drosophila melanogaster CG15530-RB, transcript variant B (CG15530),
            mRNA
          Length = 2071

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 297  ggctttgggcaggattggat 316
            ||||||||||||||||||||
Sbjct: 1250 ggctttgggcaggattggat 1231
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>ref|NM_143520.1| Drosophila melanogaster CG15530-RA, transcript variant A (CG15530),
            mRNA
          Length = 2056

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 297  ggctttgggcaggattggat 316
            ||||||||||||||||||||
Sbjct: 1250 ggctttgggcaggattggat 1231
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>gb|AC025370.12| Homo sapiens chromosome 8, clone RP11-318M2, complete sequence
          Length = 193589

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tctatccctctcctctctct 102
              ||||||||||||||||||||
Sbjct: 161277 tctatccctctcctctctct 161296
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>gb|AY075264.1| Drosophila melanogaster AT23209 full length cDNA
          Length = 2071

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 297  ggctttgggcaggattggat 316
            ||||||||||||||||||||
Sbjct: 1250 ggctttgggcaggattggat 1231
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>gb|AE008683.1|AE008683 Mus musculus T-cell receptor alpha/delta locus  section 1 of 4 of the
              complete region
          Length = 404892

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    cagttatcaccagaaatgat 288
              ||||||||||||||||||||
Sbjct: 398297 cagttatcaccagaaatgat 398316
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>gb|AC009733.5|AC009733 Drosophila melanogaster, chromosome 3R, region 99E-99E, BAC clone
              BACR05L15, complete sequence
          Length = 181056

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    ggctttgggcaggattggat 316
              ||||||||||||||||||||
Sbjct: 133300 ggctttgggcaggattggat 133281
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>gb|AC158591.2| Pan troglodytes BAC clone CH251-526G18 from chromosome unknown,
             complete sequence
          Length = 179276

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   tatcaccagaaatgatggaa 292
             ||||||||||||||||||||
Sbjct: 35275 tatcaccagaaatgatggaa 35294
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>dbj|AB096873.1| Salix reinii genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, and 26S
           rRNA
          Length = 684

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 166 cggggttcgttggcgagccg 147
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>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0494A10
          Length = 145576

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     tccctctcctctctctctga 106
              ||||||||||||||||||||
Sbjct: 111461 tccctctcctctctctctga 111480
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>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698A04
          Length = 141079

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    tccctctcctctctctctga 106
             ||||||||||||||||||||
Sbjct: 43107 tccctctcctctctctctga 43126
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>gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal protein (ATP6C) gene,
              complete cds; BAALC (BAALC) gene, complete cds,
              alternatively spliced; and frizzled-like protein 6 (FZD6)
              gene, complete cds
          Length = 347253

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     tctatccctctcctctctct 102
              ||||||||||||||||||||
Sbjct: 185971 tctatccctctcctctctct 185952
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>dbj|AK070385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054L18, full
           insert sequence
          Length = 2091

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  tccctctcctctctctctga 106
           ||||||||||||||||||||
Sbjct: 40  tccctctcctctctctctga 21
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>gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 110 of 118 of the complete
              sequence
          Length = 228443

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    ggctttgggcaggattggat 316
              ||||||||||||||||||||
Sbjct: 202841 ggctttgggcaggattggat 202822
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>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 191    ccgcggccatggccagcgccgacc 214
              |||||||||||||| |||||||||
Sbjct: 248152 ccgcggccatggccggcgccgacc 248175
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>gb|AC117728.10| Mus musculus chromosome 6, clone RP24-126C21, complete sequence
          Length = 180605

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    ctctatccctctcctctctctctg 105
             |||| |||||||||||||||||||
Sbjct: 58185 ctctctccctctcctctctctctg 58208
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>dbj|AP005855.2| Homo sapiens genomic DNA, chromosome 8q22, clone: KB1560G11, complete
             sequence
          Length = 152531

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tctatccctctcctctctct 102
             ||||||||||||||||||||
Sbjct: 35608 tctatccctctcctctctct 35589
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>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome
          Length = 1138011

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    aggtgggtactgcagttatc 276
              ||||||||||||||||||||
Sbjct: 868791 aggtgggtactgcagttatc 868772
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>gb|AC005403.1|AC005403 Mus musculus clone UWGC:ma53a068 from 14D1-D2 (T-Cell Receptor Alpha
             Locus), complete sequence
          Length = 40638

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   cagttatcaccagaaatgat 288
             ||||||||||||||||||||
Sbjct: 21715 cagttatcaccagaaatgat 21734
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>emb|AJ006436.1|CBR6436 Chosenia bracteosa 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006435.1|SVI6435 Salix viminalis 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006434.1|STR6434 Salix triandra 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 158 cggggttcgttggcgagccg 139
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>emb|AJ006433.1|SSC6433 Salix schwerinii 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006432.1|SSE6432 Salix serpyllifolia 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006431.1|SRE6431 Salix retusa 18S, 5.8S and 28S rRNA genes and internal transcribed
           spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006430.1|SPU6430 Salix purpurea 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006429.1|SPE6429 Salix pentandra 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006428.1|SHE6428 Salix herbacea 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006427.1|SFR6427 Salix fragilis 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 655

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006426.1|SEX6426 Salix exigua 18S, 5.8S and 28S rRNA genes and internal transcribed
           spacers (ITS1 and ITS2)
          Length = 655

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006425.1|SDA6425 Salix dasyclados 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138
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>emb|AJ006424.1|SAM6424 Salix amygdaloides 18S, 5.8S and 28S rRNA genes and internal
           transcribed spacers (ITS1 and ITS2)
          Length = 656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   cggggttcgttggcgagccg 24
           ||||||||||||||||||||
Sbjct: 157 cggggttcgttggcgagccg 138


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,778,309
Number of Sequences: 3902068
Number of extensions: 2778309
Number of successful extensions: 77059
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76638
Number of HSP's gapped (non-prelim): 421
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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