ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl44f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CCD22_HUMAN (O60826) Coiled-coil domain-containing protein 22 28 4.5

>CCD22_HUMAN (O60826) Coiled-coil domain-containing protein 22|
          Length = 627

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 103 PQEMR*PMLQHRVVQGMILSSPFHSTTSLVAVITRR 210
           P  +R P LQH  +QG  L  PFH++  +V  ++ R
Sbjct: 144 PPHLRTPKLQH--LQGSALQKPFHASRLVVPELSSR 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,952,360
Number of Sequences: 219361
Number of extensions: 629740
Number of successful extensions: 858
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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