Clone Name | bastl44f03 |
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Clone Library Name | barley_pub |
>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex| component Sec8) Length = 1053 Score = 171 bits (433), Expect = 7e-43 Identities = 82/108 (75%), Positives = 95/108 (87%) Frame = +2 Query: 98 GIFDGLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLI 277 GIF+GLP+P DK+YL+E L+RIDE WAAARFDSLPHVVHILTSKDR+ +I LKEQSD++ Sbjct: 2 GIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDVV 61 Query: 278 EDVVDEVVHAYHHGFNKAIQNYSHILRLFSESAESITGLKGEMAEAKK 421 E+VVDEVVHAYH GFNKAIQNYS ILRLFSES E I LK ++AEAK+ Sbjct: 62 EEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQ 109
>SEC8_NEUCR (Q9HE88) Probable exocyst complex component sec8| Length = 1111 Score = 34.3 bits (77), Expect = 0.13 Identities = 16/66 (24%), Positives = 32/66 (48%) Frame = +2 Query: 221 TSKDRDGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKAIQNYSHILRLFSESAESITGLKG 400 +S R E + ++ +++ + +VH +H GFN +I + I S + + LK Sbjct: 115 SSVGRAHEYRNFQQTHQFLQESLKNIVHDHHQGFNSSIGTFHKIQGSIQSSQKKVRALKE 174 Query: 401 EMAEAK 418 +A +K Sbjct: 175 SLAASK 180
>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 33.5 bits (75), Expect = 0.21 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +1 Query: 19 YSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 183 YS S + AP P P PA+ RPP +P RA AD RR G+G Sbjct: 891 YSCCSAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947
>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 33.5 bits (75), Expect = 0.21 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +1 Query: 19 YSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 183 YS S + AP P P PA+ RPP +P RA AD RR G+G Sbjct: 891 YSCCSAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 32.0 bits (71), Expect = 0.62 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +1 Query: 25 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141 P +P AP P S L VG PP+ +R PP A ++LP Sbjct: 1997 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2035
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 32.0 bits (71), Expect = 0.62 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +1 Query: 25 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141 P +P AP P S L VG PP+ +R PP A ++LP Sbjct: 2000 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2038
>MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48)| Length = 489 Score = 31.2 bits (69), Expect = 1.1 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 12/90 (13%) Frame = +2 Query: 44 RLSPGPASPSVTMNRHRRGIFDGLP-------IPPD---KSYLKEGLSRIDEGWAAARFD 193 ++SP P PS++M R I+ LP + P KS +S++ + F Sbjct: 83 KVSPRPTPPSLSMRRSEASIYT-LPTSLKNRTVSPSVYTKSSTVSSISKLSSSSPLSSFS 141 Query: 194 SLPHV--VHILTSKDRDGEIQFLKEQSDLI 277 PH+ VH L+ K +D +++ ++ +S I Sbjct: 142 EKPHLNRVHSLSVKTKDLKLKGIRGRSQTI 171
>CD2_RAT (P08921) T-cell surface antigen CD2 precursor (T-cell surface| antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (OX-34 antigen) Length = 344 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/56 (30%), Positives = 23/56 (41%) Frame = +1 Query: 4 SYPLSYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVADRRG 171 S P S +PV+ P PG L P P H R ++ P G V ++G Sbjct: 264 SAPASQNPVASQAPPPPGHHLQTPGHRPLPPSHRNREHQPKKRPPPSGTQVHQQKG 319
>Y4TJ_RHISN (P55664) Putative threonine dehydratase (EC 4.3.1.19) (Threonine| deaminase) Length = 332 Score = 30.8 bits (68), Expect = 1.4 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 11/89 (12%) Frame = -3 Query: 237 SRSLEVRMCTTCGSESNRAAAHPSSIRDSPSFR*DLSGGIGRPSKMPRRWRF-------- 82 +R + V M +++ A HP +++ S L GGIG M W F Sbjct: 201 ARIIGVTMDRGAAMKASIEAGHPVQVKEYRSLADSLGGGIG----MANAWTFQMCRALLD 256 Query: 81 ---IVTDGEAGPGERREIWRDWAIREGVG 4 +V +GE G R + I EG G Sbjct: 257 DVVLVNEGEIAAGIRHAYEHERQILEGAG 285
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2158 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +1 Query: 25 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141 P +P AP P S L VG PP +R PP A ++LP Sbjct: 1998 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2036
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +1 Query: 25 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141 P +P AP P S L VG PP +R PP A ++LP Sbjct: 2001 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2039
>FA84A_BOVIN (Q3ZCA1) Protein FAM84A| Length = 297 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +2 Query: 110 GLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 283 G P + YLK L+ D ARF SL ++ D G ++ L+E +DL++D Sbjct: 240 GTQPPQQQYYLKVHLA--DNKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 295
>VGLC_BHV1C (P14378) Glycoprotein GIII precursor| Length = 521 Score = 30.0 bits (66), Expect = 2.4 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 10/64 (15%) Frame = +1 Query: 22 SPVSPDLAP---LPGSRLAVGNDEP-------PPAWHLRRPPNSARQILPEGRAVADRRG 171 +P SPD P PG+ VG EP PP + PP P G A R G Sbjct: 57 TPNSPDATPEDSTPGATTPVGTPEPPSVSEHDPPVTNSTPPPAPPEDGRPGGAGNASRDG 116 Query: 172 MGSG 183 SG Sbjct: 117 RPSG 120
>GCSH_PEA (P16048) Glycine cleavage system H protein, mitochondrial precursor| Length = 165 Score = 29.3 bits (64), Expect = 4.0 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Frame = +2 Query: 14 SRIAQSLQISRLSPGPASPSVTMNRHRRGIFDGLPIPPDKSYLKEGLSRIDEGWAAARFD 193 S A +L++S S SP+ +++R + DGL P ++K S G D Sbjct: 8 SSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIGITDHAQD 67 Query: 194 SLPHVVHI--------LTSKDRDGEIQFLKEQSDLIEDVVDEVV 301 L VV + +T G ++ +K SD+ + EV+ Sbjct: 68 HLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVI 111
>REB1_KLULA (Q05950) DNA-binding protein REB1 (QBP)| Length = 595 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +2 Query: 131 KSYLKEGLSRIDEGWAAARFDSLPHVVHIL----TSKDRDGEIQFLKEQSDLIEDVVD 292 ++Y+K G +R W+ + L +V+H + ++ DGE +K+ S IED D Sbjct: 379 RNYVKCGPNRAANKWSVEEEEKLKNVIHQMLDNASTAYEDGEDDEMKDSSTKIEDSGD 436
>YAYB_SCHPO (Q10218) Hypothetical protein C4H3.11c in chromosome I| Length = 783 Score = 28.9 bits (63), Expect = 5.3 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Frame = +2 Query: 143 KEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGE-IQFLKEQSDLIEDVVDEVVHAYHHG 319 K G S +D+G AA+R+D+ + K+R E ++ L+EQ + I+ V V+ Sbjct: 349 KLGESNVDDGMAASRYDT------VKREKERLSEHLKSLQEQYEHIQSVYKNVL------ 396 Query: 320 FNKAIQNYSHILRLFSESAES 382 + S+I+RL ++ +E+ Sbjct: 397 ----LDRESYIMRLGNKISEN 413
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 28.5 bits (62), Expect = 6.9 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Frame = +1 Query: 13 LSYSPVSP--DLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVADRRGMGSGX 186 LS +P SP ++P PG RL++ P P P+S P G + RR Sbjct: 93 LSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSK----PGGAPSSSRR------ 142 Query: 187 XXXXXXXXXHPHLQGPRWRDPVPQG 261 P L P W P P+G Sbjct: 143 ----------PLLSSPSWGGPEPEG 157
>CD123_YEAST (Q05791) Cell division cycle protein 123| Length = 360 Score = 28.5 bits (62), Expect = 6.9 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +2 Query: 212 HILTSKDRD-GEIQFLKEQSDLIEDVVDEVVH 304 HI+ + RD +L E SD +D++DE+VH Sbjct: 206 HIVGATQRDLNYYDYLDELSDTFKDLIDEIVH 237
>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 28.5 bits (62), Expect = 6.9 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Frame = +1 Query: 13 LSYSPVSP--DLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVADRRGMGSGX 186 LS +P SP ++P PG RL++ P P P+S P G + RR Sbjct: 93 LSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSK----PGGAPSSSRR------ 142 Query: 187 XXXXXXXXXHPHLQGPRWRDPVPQG 261 P L P W P P+G Sbjct: 143 ----------PLLSSPSWGGPEPEG 157
>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 28.5 bits (62), Expect = 6.9 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Frame = +1 Query: 13 LSYSPVSP--DLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVADRRGMGSGX 186 LS +P SP ++P PG RL++ P P P+S P G + RR Sbjct: 93 LSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSK----PGGAPSSSRR------ 142 Query: 187 XXXXXXXXXHPHLQGPRWRDPVPQG 261 P L P W P P+G Sbjct: 143 ----------PLLSSPSWGGPEPEG 157
>DNAK1_SYNPX (Q7U6R7) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat| shock 70 kDa protein 1) (HSP70-1) Length = 662 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -2 Query: 169 LVDPRQPFLQV-RFVWRNWEAVEDATPVAVHRYRRRGGTRGEAR 41 ++ PR F + RFV R+WE +ED++ +AV Y R RG+ R Sbjct: 59 VLSPRNTFSNLKRFVGRDWEELEDSS-LAV-PYTVRANDRGQVR 100
>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Activated in prostate cancer protein) Length = 2839 Score = 28.5 bits (62), Expect = 6.9 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = -1 Query: 170 PRRSATALPSGKICLAELGGRRRCHAGGG-----SSLPTARRDPGRGAR 39 PRRS P+G + E GG R C G G + P++ D G A+ Sbjct: 2518 PRRSPGP-PAGGVSCPEKGGNRACPGGSGPKTSAAETPSSASDTGEAAQ 2565
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 28.5 bits (62), Expect = 6.9 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%) Frame = +1 Query: 4 SYPLSYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRP---PNSARQILPEGR----AVAD 162 S P S P+ + P P R A G+ P P+ + P P +A+ P+ + AVA+ Sbjct: 631 SAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQAKSLQPAVAE 690 Query: 163 RRG 171 ++G Sbjct: 691 KQG 693
>BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated protein| Length = 653 Score = 28.1 bits (61), Expect = 9.0 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = +1 Query: 7 YPLSYSPV--SPDLAPL-PGSRLAVGNDEPPPAWHLRRPPNSARQILPEGR 150 +P + SP P PL PG + A+ PP W+LR P SAR + GR Sbjct: 422 FPRTVSPFPGEPFRFPLSPGPQPAL---MPPNLWNLRAKPGSARLVAGAGR 469
>FA84A_HUMAN (Q96KN4) Protein FAM84A (Protein NSE1)| Length = 292 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/58 (31%), Positives = 28/58 (48%) Frame = +2 Query: 110 GLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKEQSDLIED 283 G P + YLK L + ARF SL ++ D G ++ L+E +DL++D Sbjct: 235 GTQPPQQQYYLKVHLG--ENKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 290
>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)| Length = 1220 Score = 28.1 bits (61), Expect = 9.0 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = -3 Query: 210 TTCGSESNRAAAHPSSIRDSPSFR*DLSGGIGRPSKMPRRWRFIVTDGEAGPG 52 TT S N A S +P + G +GRP + P+ W + + GPG Sbjct: 813 TTTSSYDN--AIFNSQFNKAPGSDDEEGGNLGRPIENPKTWVISIEVEDTGPG 863
>KIF3C_MOUSE (O35066) Kinesin-like protein KIF3C| Length = 796 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Frame = -1 Query: 140 GKICLAELGGRRRCH------AGGGSSLPTARRDPGRGARSGETGLYER 12 GK+ L +L G R + AGG ++ PTA G G+ SG ER Sbjct: 240 GKLNLVDLAGSERQNKAGPNAAGGPATQPTAGGGSGSGSASGSASSGER 288 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.138 0.452 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,743,230 Number of Sequences: 219361 Number of extensions: 1293147 Number of successful extensions: 3816 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3680 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3813 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)