>PDC6I_XENLA (Q9W6C5) Programmed cell death 6-interacting protein (Signal|
           transduction protein Xp95)
          Length = 867

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
 Frame = +1

Query: 112 LAIHEKKAAAVDLYRPLRQYIASAYSERDAAT----ADDDLCAVRDLRAAAVESPCLPDS 279
           +++  KK + VDL +PL +YI + Y   +  T    A D+L     LR +AV  P     
Sbjct: 5   ISVPLKKTSEVDLVKPLSKYIHNTYPSGEDQTEYCRAVDEL---NKLRKSAVGRPLDKHE 61

Query: 280 SSLEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAFKTNK------KVSLPS 441
           +SLE               VEP+FP +  +     L+FTW DAF          K++LPS
Sbjct: 62  TSLE----TVMRYYDQLCSVEPKFPFTESQL---CLTFTWKDAFDKGSIFGGSVKLALPS 114

Query: 442 V 444
           +
Sbjct: 115 L 115

>PDC6I_HUMAN (Q8WUM4) Programmed cell death 6-interacting protein|
           (PDCD6-interacting protein) (ALG-2-interacting protein
           1) (Hp95)
          Length = 868

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
 Frame = +1

Query: 112 LAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCA--VRDLRAAAVESPCLPDSSS 285
           +++  KK + VDL +PL ++I   Y       A     A  +  LR AAV  P      +
Sbjct: 5   ISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAAVGRPLDKHEGA 64

Query: 286 LEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 411
           LE               +EP+FP S ++     L+FTW DAF
Sbjct: 65  LE----TLLRYYDQICSIEPKFPFSENQI---CLTFTWKDAF 99

>PDC6I_MOUSE (Q9WU78) Programmed cell death 6-interacting protein|
           (ALG-2-interacting protein X) (ALG-2-interacting protein
           1) (E2F1-inducible protein) (Eig2)
          Length = 869

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
 Frame = +1

Query: 127 KKAAAVDLYRPLRQYIASAYSERDAATADDDLCA--VRDLRAAAVESPCLPDSSSLEQXX 300
           KK + VDL +PL ++I   Y       A     A  +  LR +A+  P      +LE   
Sbjct: 10  KKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRSALGRPLDKHEGALE--- 66

Query: 301 XXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 411
                       +EP+FP S ++     L+FTW DAF
Sbjct: 67  -TLLRYYDQICSIEPKFPFSENQI---CLTFTWKDAF 99

>BRO1_ASPFU (Q4X0Z5) Vacuolar protein-sorting protein bro1 (BRO|
           domain-containing protein 1)
          Length = 976

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
 Frame = +1

Query: 94  MAANVMLAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCAV-----RDLRAAAVE 258
           M  + ML+   K+   +D  RPL+ YI  +Y E       +  CA      +D+R A  +
Sbjct: 1   MVQSPMLSCPLKQTNEIDWIRPLKDYIRQSYGEDPERYNQE--CATLNRLRQDMRGAGKD 58

Query: 259 SPCLPDSSSLEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAFKTNKKVS 432
           S    D                    ++ RFP+  D  H+  +SFTW+DAF T+K  S
Sbjct: 59  SATGRD---------LLYRYYGQLELLDLRFPV--DENHI-KISFTWYDAF-THKPTS 103

>BRO1_GIBZE (Q4IBS9) Vacuolar protein-sorting protein BRO1 (BRO|
           domain-containing protein 1)
          Length = 995

 Score = 35.8 bits (81), Expect = 0.050
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
 Frame = +1

Query: 94  MAANVMLAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCAV-----RDLRAAAVE 258
           MA + M+++  K    +D   PL++YI   Y +     A++  CA      +D+R A  +
Sbjct: 1   MAQSPMISVPLKATNEIDWVEPLKRYIRDTYGDDPERYAEE--CATLNRLRQDVRGAGKD 58

Query: 259 SPCLPDSSSLEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 411
           S    D                    ++ RFP+  D  H+  +SFTW DAF
Sbjct: 59  STSGRD---------MLYRYYGQLELLDLRFPV--DEQHI-KISFTWFDAF 97

>BRO1_EMENI (Q6XPR4) Vacuolar protein-sorting protein bro1 (BRO|
           domain-containing protein 1)
          Length = 1000

 Score = 35.0 bits (79), Expect = 0.086
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
 Frame = +1

Query: 94  MAANVMLAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCAV-----RDLRAAAVE 258
           M  + M++   K+   +D  +PL+ YI  +Y E     + +  CA      +D+R A  +
Sbjct: 1   MVQSPMISCPLKQTNEIDWIQPLKDYIRQSYGEDPERYSQE--CATLNRLRQDMRGAGKD 58

Query: 259 SPCLPDSSSLEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAFKTNKKVS 432
           S    D                    ++ RFP+  D  H+  +SFTW+DAF T+K  S
Sbjct: 59  SATGRD---------LLYRYYGQLELLDLRFPV--DENHI-KISFTWYDAF-THKPTS 103

>SAS4_CAEBR (Q60JJ0) Spindle assembly abnormal protein 4|
          Length = 761

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +1

Query: 1   PPKISSPRSNYPQPPTSIPSSAALPSGHRAPMAAN--VMLAIHEKKAAAVDLYRPLRQYI 174
           PP +  PR++ PQ  +S+ SS +L +    P+A N   M+  +E +     L  P RQ +
Sbjct: 198 PPPLVPPRNHSPQTLSSLASSGSLDTPQARPLAGNRLNMMVQNEAQTGISLLNNPRRQPM 257

Query: 175 ASAY 186
             A+
Sbjct: 258 LPAH 261

>3BP1_MOUSE (P55194) SH3 domain-binding protein 1 (3BP-1)|
          Length = 601

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 26/89 (29%), Positives = 43/89 (48%)
 Frame = +1

Query: 7   KISSPRSNYPQPPTSIPSSAALPSGHRAPMAANVMLAIHEKKAAAVDLYRPLRQYIASAY 186
           K+SS + +   PP ++P+ A  P    AP  A   +A+ E+  A  DL +P    ++   
Sbjct: 410 KVSSQQVSEELPPVTVPAPATTP----APTLAPASMAVRERTEA--DLPKPTSPKVSRNP 463

Query: 187 SERDAATADDDLCAVRDLRAAAVESPCLP 273
           +E  AA+A+D     R  +  A   P +P
Sbjct: 464 TE-TAASAED---MTRKTKRPAPARPTMP 488

>BRO1_NEUCR (Q7SAN9) Vacuolar protein-sorting protein bro-1 (BRO|
           domain-containing protein 1)
          Length = 1012

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
 Frame = +1

Query: 109 MLAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCAV-----RDLRAAAVESPCLP 273
           M+++  K  + +D   PL+ YI + Y +     A++  CA      +D+R A  +S    
Sbjct: 6   MISVPLKATSEIDWVAPLKNYIRNTYGDDPERYAEE--CATLNRLRQDMRGAGKDSTSGR 63

Query: 274 DSSSLEQXXXXXXXXXXXXXXVEPRFPISPDRAHVHSLSFTWHDAF 411
           D                    ++ RFP+  D  ++  +SFTW DAF
Sbjct: 64  D---------LLYRYYGQLELLDLRFPV--DEKNI-KISFTWFDAF 97

>MUKF_VIBCH (Q9KRC6) Chromosome partition protein mukF|
          Length = 445

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 20/66 (30%)
 Frame = +1

Query: 109 MLAIHEKKAAAVDLYRPLRQYIAS--------------------AYSERDAATADDDLCA 228
           ML +H+++ AA+DL   LR Y+AS                     YSE D      D  A
Sbjct: 370 MLKVHKEQGAAIDLALVLRDYLASHPRTHHFDLARMVVDQAVRLGYSESDYRAIQPDWTA 429

Query: 229 VRDLRA 246
           + D  A
Sbjct: 430 INDFGA 435

>SCRA_LIMPO (Q25390) Alpha-scruin|
          Length = 918

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 31  YPQPPTSIPSSAALPSGHRAPMAANVMLA--IHEKKAAAVDLYRPLRQYI 174
           Y + PTS PSS A P     P +        IHE+  AA  + R  R+YI
Sbjct: 396 YYEVPTSTPSSKAKPQPGSKPTSVKYKKQPDIHERNEAAKKVQRRWRRYI 445

>ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 562

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 1   PPKISSPRSNYPQPPTSIPSSAALPSGHRAP 93
           PP  S+P    P PP+++P     P  +RAP
Sbjct: 521 PPAPSAPTPPIPSPPSTLPPPPQAPPPNRAP 551

>ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 564

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 1   PPKISSPRSNYPQPPTSIPSSAALPSGHRAP 93
           PP  S+P    P PP+++P     P  +RAP
Sbjct: 523 PPPPSAPTPPIPSPPSTLPPPPQAPPPNRAP 553

>SNX19_HUMAN (Q92543) Sorting nexin-19|
          Length = 992

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +1

Query: 1   PPKISSPRSNYPQPPTSIPSSAA---LPSGHRAPMAANVMLAIHEKKAAA 141
           P   S+P    P  PTS+P  A    LP G  +P+AA V L+  E + +A
Sbjct: 276 PCPASAPEQ--PSVPTSLPLIAEVEQLPEGRASPVAAPVFLSYSEPEGSA 323

>Y1998_MYCTU (Q10859) Hypothetical protein Rv1998c/MT2054|
          Length = 258

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = +1

Query: 52  IPSSAALPSGHRAPMAANVMLAIHEKKAAAVDLYRPLRQYIASAYSERDAATAD 213
           + SS   P GHRA   AN+ LA     AA   L   +   I   YS+   A AD
Sbjct: 42  VSSSGGHPDGHRATRGANIALA-----AALAPLQCYVSVDIEDGYSDEPDAIAD 90

>BNC2_HUMAN (Q6ZN30) Zinc finger protein basonuclin-2|
          Length = 1099

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
 Frame = +1

Query: 40  PPTSIPSSAALPSG---------HRAPMAANVMLAIHEKKAAAVDLYRPLRQYIASAYSE 192
           PPTS+P+S  +P+             P+   VM+A HE  A      +P +  +     +
Sbjct: 585 PPTSLPTSPIIPTSGTIEQHPPPPSEPVVPAVMMATHEPSADLAPKKKPRKSSMPVKIEK 644

Query: 193 RDAATADD 216
               TAD+
Sbjct: 645 EIIDTADE 652

>PALA_EMENI (P79020) pH-response regulator protein palA/RIM20|
          Length = 847

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +1

Query: 94  MAANVMLAIHEKKAAAVDLYRPLRQYIASAYSERDAATADDDLCAVRDLRAAAV 255
           MA+N+ L I  +++  V L   L QYI++ Y +R    A DDL  +  LR  A+
Sbjct: 1   MASNI-LQIPFRRSHTVSLSTALTQYISTKYDQRPDMFA-DDLLIIDRLRNEAI 52

>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
 Frame = +1

Query: 1   PPKISSPRSNYPQPPT--------SIPSSAALPSGHRAP 93
           PP   +PRS  P PPT        S+P+    PSG  +P
Sbjct: 153 PPARPAPRSTPPSPPTHRVHHFYPSLPTPLLRPSGRPSP 191

>Y4XL_RHISN (P55704) Hypothetical protein y4xL|
          Length = 338

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
 Frame = +1

Query: 13  SSPRSNYPQPPTSIPSSAAL----PSG--HRAPMAANVMLAIHEKKAAAVDLYRPLRQYI 174
           +SP +  PQP +  P++A+      SG  +  P AA+ +L   E  +  +D   P  QY+
Sbjct: 6   TSPLNASPQPDSPPPANASAFAHQLSGFQYSPPHAADSLLPQVEADSPYLDTRHPYSQYL 65

Query: 175 ASAY 186
            SAY
Sbjct: 66  DSAY 69

>SIM2_HUMAN (Q14190) Single-minded homolog 2|
          Length = 667

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 4   PKISSPRSNYPQPPTSIPSSAALPSGHRAPMAA 102
           P  SSP  N P+PP +    + +PS + AP AA
Sbjct: 499 PSSSSPAKNPPEPPANTARHSLVPS-YEAPAAA 530

>POZP3_HUMAN (Q6PJE2) POM121 and ZP3 fusion protein (POM-ZP3)|
          Length = 329

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
 Frame = +1

Query: 1   PPKISSPRSNYPQPPT--------SIPSSAALPSGHRAP 93
           PP   +PRS  P PPT        S+P+    PSG  +P
Sbjct: 30  PPARPAPRSTPPSPPTHRVHHFYPSLPTPLLRPSGRPSP 68

>APSA_EMENI (Q00083) Anucleate primary sterigmata protein A|
          Length = 1676

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 23/91 (25%), Positives = 34/91 (37%)
 Frame = +1

Query: 4   PKISSPRSNYPQPPTSIPSSAALPSGHRAPMAANVMLAIHEKKAAAVDLYRPLRQYIASA 183
           P   +PR N+ +  T   S      GH   M  N+   IH +K   ++L R L++     
Sbjct: 387 PNKFTPRHNHLETETLRSSL-----GHAHRMIQNLRSTIHREKTEKIELKRMLQEARDEV 441

Query: 184 YSERDAATADDDLCAVRDLRAAAVESPCLPD 276
              R  + A +     R    A    P  PD
Sbjct: 442 EQRRRDSVAANGPTNKRQKTKAETRKPARPD 472


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.127    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,158,936
Number of Sequences: 219361
Number of extensions: 423470
Number of successful extensions: 2446
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2431
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)