ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl44f02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197157.1| Oryza sativa (japonica cultivar-group) putative signal tranduction protein (OSJNBa0041P03.2), mRNA Length = 2871 Score = 293 bits (148), Expect = 2e-76 Identities = 303/354 (85%), Gaps = 3/354 (0%) Strand = Plus / Plus Query: 96 ggcggccaacgtcatgctggcgatccacgagaagaaggccgcggccgtcgacctctaccg 155 |||||| ||||| |||||||||||||||||||||| | || | || |||||||||||| Sbjct: 9 ggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccg 68 Query: 156 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 215 ||||||||||| |||||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 69 cccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 128 Query: 216 cgacctctgcgccgtgcgcgacctccgcgccgcggccgtcgagagcccctgcctcccgga 275 ||||||| ||| ||||||||||| ||||||| ||||||| || | |||||||| Sbjct: 129 cgacctcgccgcggtgcgcgacctgcgcgccga---cgtcgagcagccgtcgctcccgga 185 Query: 276 ctcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcgctcgccct 335 | | ||||||||||||| | || | ||||||||| |||||||| ||||| || |||| Sbjct: 186 cccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctgtccct 245 Query: 336 cgtcgagccccgcttccccatctcccccgaccgcgcccacgtccactccctctccttcac 395 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 246 cgtcgagccccgcttccccatctcctccgaccgcgcccacgtccactccctcgccttcac 305 Query: 396 ctggcacgacgccttcaagaccaacaagaaggtcagcctgccctccgtccacct 449 |||||||||||||||||||||| |||||||| |||| | ||||| ||||||| Sbjct: 306 ctggcacgacgccttcaagaccggcaagaaggccagcgtcgcctccatccacct 359
>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete sequence Length = 139614 Score = 293 bits (148), Expect = 2e-76 Identities = 303/354 (85%), Gaps = 3/354 (0%) Strand = Plus / Plus Query: 96 ggcggccaacgtcatgctggcgatccacgagaagaaggccgcggccgtcgacctctaccg 155 |||||| ||||| |||||||||||||||||||||| | || | || |||||||||||| Sbjct: 23276 ggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccg 23335 Query: 156 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 215 ||||||||||| |||||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 23336 cccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 23395 Query: 216 cgacctctgcgccgtgcgcgacctccgcgccgcggccgtcgagagcccctgcctcccgga 275 ||||||| ||| ||||||||||| ||||||| ||||||| || | |||||||| Sbjct: 23396 cgacctcgccgcggtgcgcgacctgcgcgccga---cgtcgagcagccgtcgctcccgga 23452 Query: 276 ctcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcgctcgccct 335 | | ||||||||||||| | || | ||||||||| |||||||| ||||| || |||| Sbjct: 23453 cccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctgtccct 23512 Query: 336 cgtcgagccccgcttccccatctcccccgaccgcgcccacgtccactccctctccttcac 395 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 23513 cgtcgagccccgcttccccatctcctccgaccgcgcccacgtccactccctcgccttcac 23572 Query: 396 ctggcacgacgccttcaagaccaacaagaaggtcagcctgccctccgtccacct 449 |||||||||||||||||||||| |||||||| |||| | ||||| ||||||| Sbjct: 23573 ctggcacgacgccttcaagaccggcaagaaggccagcgtcgcctccatccacct 23626
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 293 bits (148), Expect = 2e-76 Identities = 303/354 (85%), Gaps = 3/354 (0%) Strand = Plus / Minus Query: 96 ggcggccaacgtcatgctggcgatccacgagaagaaggccgcggccgtcgacctctaccg 155 |||||| ||||| |||||||||||||||||||||| | || | || |||||||||||| Sbjct: 18327494 ggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccg 18327435 Query: 156 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 215 ||||||||||| |||||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 18327434 cccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 18327375 Query: 216 cgacctctgcgccgtgcgcgacctccgcgccgcggccgtcgagagcccctgcctcccgga 275 ||||||| ||| ||||||||||| ||||||| ||||||| || | |||||||| Sbjct: 18327374 cgacctcgccgcggtgcgcgacctgcgcgccga---cgtcgagcagccgtcgctcccgga 18327318 Query: 276 ctcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcgctcgccct 335 | | ||||||||||||| | || | ||||||||| |||||||| ||||| || |||| Sbjct: 18327317 cccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctgtccct 18327258 Query: 336 cgtcgagccccgcttccccatctcccccgaccgcgcccacgtccactccctctccttcac 395 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 18327257 cgtcgagccccgcttccccatctcctccgaccgcgcccacgtccactccctcgccttcac 18327198 Query: 396 ctggcacgacgccttcaagaccaacaagaaggtcagcctgccctccgtccacct 449 |||||||||||||||||||||| |||||||| |||| | ||||| ||||||| Sbjct: 18327197 ctggcacgacgccttcaagaccggcaagaaggccagcgtcgcctccatccacct 18327144 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 193 cgcgacgcggccaccgccgacgacgacc 220 |||| ||| ||||||||||||||||||| Sbjct: 16721878 cgcggcgccgccaccgccgacgacgacc 16721851
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 293 bits (148), Expect = 2e-76 Identities = 303/354 (85%), Gaps = 3/354 (0%) Strand = Plus / Minus Query: 96 ggcggccaacgtcatgctggcgatccacgagaagaaggccgcggccgtcgacctctaccg 155 |||||| ||||| |||||||||||||||||||||| | || | || |||||||||||| Sbjct: 18337147 ggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccg 18337088 Query: 156 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 215 ||||||||||| |||||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 18337087 cccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 18337028 Query: 216 cgacctctgcgccgtgcgcgacctccgcgccgcggccgtcgagagcccctgcctcccgga 275 ||||||| ||| ||||||||||| ||||||| ||||||| || | |||||||| Sbjct: 18337027 cgacctcgccgcggtgcgcgacctgcgcgccga---cgtcgagcagccgtcgctcccgga 18336971 Query: 276 ctcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcgctcgccct 335 | | ||||||||||||| | || | ||||||||| |||||||| ||||| || |||| Sbjct: 18336970 cccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctgtccct 18336911 Query: 336 cgtcgagccccgcttccccatctcccccgaccgcgcccacgtccactccctctccttcac 395 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 18336910 cgtcgagccccgcttccccatctcctccgaccgcgcccacgtccactccctcgccttcac 18336851 Query: 396 ctggcacgacgccttcaagaccaacaagaaggtcagcctgccctccgtccacct 449 |||||||||||||||||||||| |||||||| |||| | ||||| ||||||| Sbjct: 18336850 ctggcacgacgccttcaagaccggcaagaaggccagcgtcgcctccatccacct 18336797 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 193 cgcgacgcggccaccgccgacgacgacc 220 |||| ||| ||||||||||||||||||| Sbjct: 16730918 cgcggcgccgccaccgccgacgacgacc 16730891
>dbj|AK103856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148O10, full insert sequence Length = 3011 Score = 285 bits (144), Expect = 6e-74 Identities = 302/354 (85%), Gaps = 3/354 (0%) Strand = Plus / Plus Query: 96 ggcggccaacgtcatgctggcgatccacgagaagaaggccgcggccgtcgacctctaccg 155 |||||| ||||| |||||||||||||||||||||| | || | || |||||||||||| Sbjct: 129 ggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgacctctaccg 188 Query: 156 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 215 ||||||||||| |||||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 189 cccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 248 Query: 216 cgacctctgcgccgtgcgcgacctccgcgccgcggccgtcgagagcccctgcctcccgga 275 ||||||| ||| ||||||||||| ||||||| ||||||| || | |||||||| Sbjct: 249 cgacctcgccgcggtgcgcgacctgcgcgccga---cgtcgagcagccgtcgctcccgga 305 Query: 276 ctcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcgctcgccct 335 | | ||||||||||||| | || | ||||||||| |||||||| ||||| || |||| Sbjct: 306 cccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctgtccct 365 Query: 336 cgtcgagccccgcttccccatctcccccgaccgcgcccacgtccactccctctccttcac 395 ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 366 cgtcgagccccgcttccccatctcctccgaccgcgccaacgtccactccctcgccttcac 425 Query: 396 ctggcacgacgccttcaagaccaacaagaaggtcagcctgccctccgtccacct 449 |||||||||||||||||||||| |||||||| |||| | ||||| ||||||| Sbjct: 426 ctggcacgacgccttcaagaccggcaagaaggccagcgtcgcctccatccacct 479
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 4e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 153 ccgcccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccga 212 |||||||||||||| ||||||||||||||||||||||||| || |||||| | ||||| Sbjct: 18973453 ccgcccgctccgcctccacatcgcctccgcctactcggagcgggaggcggccgcggccga 18973512 Query: 213 cgacgacctc 222 |||||||||| Sbjct: 18973513 cgacgacctc 18973522 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 384 cctctccttcacctggcacgacgccttca 412 |||| |||||||||||||||||||||||| Sbjct: 25613323 cctcgccttcacctggcacgacgccttca 25613295 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 303 cgcgctcctggcctacgcccgcgcgctcgccctcgtcgagcccc 346 ||||||| | |||||||||||||| ||| ||||| ||||||||| Sbjct: 18973532 cgcgctcatcgcctacgcccgcgccctctccctcatcgagcccc 18973575
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22 Length = 68256 Score = 83.8 bits (42), Expect = 4e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 153 ccgcccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccga 212 |||||||||||||| ||||||||||||||||||||||||| || |||||| | ||||| Sbjct: 28774 ccgcccgctccgcctccacatcgcctccgcctactcggagcgggaggcggccgcggccga 28833 Query: 213 cgacgacctc 222 |||||||||| Sbjct: 28834 cgacgacctc 28843 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 303 cgcgctcctggcctacgcccgcgcgctcgccctcgtcgagcccc 346 ||||||| | |||||||||||||| ||| ||||| ||||||||| Sbjct: 28853 cgcgctcatcgcctacgcccgcgccctctccctcatcgagcccc 28896
>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0018H09, complete sequence Length = 155329 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 303 cgcgctcctggcctacgcccgcgcgctcgccctcgtcgagccccgcttccccatc 357 ||||||||| |||||||||||||| ||| ||||||||||||| |||||||||||| Sbjct: 129691 cgcgctcctcgcctacgcccgcgccctctccctcgtcgagccgcgcttccccatc 129745 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 156 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 215 ||||||||||| ||||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 129615 cccgctccgcctccacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 129674 Query: 216 cgacctc 222 ||||||| Sbjct: 129675 cgacctc 129681
>gb|AC130731.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692E03, complete sequence Length = 74462 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 303 cgcgctcctggcctacgcccgcgcgctcgccctcgtcgagccccgcttccccatc 357 ||||||||| |||||||||||||| ||| ||||||||||||| |||||||||||| Sbjct: 684 cgcgctcctcgcctacgcccgcgccctctccctcgtcgagccgcgcttccccatc 738 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 156 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 215 ||||||||||| ||||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 608 cccgctccgcctccacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 667 Query: 216 cgacctc 222 ||||||| Sbjct: 668 cgacctc 674
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 303 cgcgctcctggcctacgcccgcgcgctcgccctcgtcgagccccgcttccccatc 357 ||||||||| |||||||||||||| ||| ||||||||||||| |||||||||||| Sbjct: 11227437 cgcgctcctcgcctacgcccgcgccctctccctcgtcgagccgcgcttccccatc 11227491 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 156 cccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacga 215 ||||||||||| ||||||||||||||||||||||||| || |||||| | |||||||| Sbjct: 11227361 cccgctccgcctccacatcgcctccgcctactcggagcgggaggcggccgcggccgacga 11227420 Query: 216 cgacctc 222 ||||||| Sbjct: 11227421 cgacctc 11227427 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cctccgcgccgcggccgtcg 256 |||||||||||||||||||| Sbjct: 27889594 cctccgcgccgcggccgtcg 27889613
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 268 ctcccggactcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcg 327 |||||| || ||||||||||||||| | | || | |||||||| ||||| ||| |||| Sbjct: 310644 ctcccgaacccctcctccctcgagcggaggcgggatgcgctcctcgcctatgcctgcgcc 310585 Query: 328 ctcgccctcgtcgagccccgcttccccatc 357 ||| |||||||||||||||| ||||||||| Sbjct: 310584 ctctccctcgtcgagccccgtttccccatc 310555 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 157 ccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacgac 216 |||||||||| |||||| |||||||||||||||||| || || ||| | ||||| ||| Sbjct: 310752 ccgctccgcctctacatcacctccgcctactcggagcaggaggcagccgcggccgatgac 310693 Query: 217 gacctc 222 |||||| Sbjct: 310692 gacctc 310687
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 268 ctcccggactcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcg 327 |||||| || ||||||||||||||| | | || | |||||||| ||||| ||| |||| Sbjct: 38172 ctcccgaacccctcctccctcgagcggaggcgggatgcgctcctcgcctatgcctgcgcc 38113 Query: 328 ctcgccctcgtcgagccccgcttccccatc 357 ||| |||||||||||||||| ||||||||| Sbjct: 38112 ctctccctcgtcgagccccgtttccccatc 38083 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 157 ccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacgac 216 |||||||||| |||||| |||||||||||||||||| || || ||| | ||||| ||| Sbjct: 38280 ccgctccgcctctacatcacctccgcctactcggagcaggaggcagccgcggccgatgac 38221 Query: 217 gacctc 222 |||||| Sbjct: 38220 gacctc 38215
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 268 ctcccggactcctcctccctcgagcagcgccgcgccgcgctcctggcctacgcccgcgcg 327 |||||| || ||||||||||||||| | | || | |||||||| ||||| ||| |||| Sbjct: 310642 ctcccgaacccctcctccctcgagcggaggcgggatgcgctcctcgcctatgcctgcgcc 310583 Query: 328 ctcgccctcgtcgagccccgcttccccatc 357 ||| |||||||||||||||| ||||||||| Sbjct: 310582 ctctccctcgtcgagccccgtttccccatc 310553 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 157 ccgctccgccagtacatcgcctccgcctactcggagcgcgacgcggccaccgccgacgac 216 |||||||||| |||||| |||||||||||||||||| || || ||| | ||||| ||| Sbjct: 310750 ccgctccgcctctacatcacctccgcctactcggagcaggaggcagccgcggccgatgac 310691 Query: 217 gacctc 222 |||||| Sbjct: 310690 gacctc 310685
>ref|XM_466958.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1376 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 384 cctctccttcacctggcacgacgccttca 412 |||| |||||||||||||||||||||||| Sbjct: 258 cctcgccttcacctggcacgacgccttca 286
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 297 ccgcgccgcgctcctggcctacgcccgcgcgctcgcc 333 |||||||||||||| |||| |||||||||||||||| Sbjct: 1386170 ccgcgccgcgctccaggcccgcgcccgcgcgctcgcc 1386134 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cgagcagcgccgcgccgcgctcct 311 |||| ||||||||||||||||||| Sbjct: 1510986 cgaggagcgccgcgccgcgctcct 1511009
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 384 cctctccttcacctggcacgacgccttca 412 |||| |||||||||||||||||||||||| Sbjct: 83370 cctcgccttcacctggcacgacgccttca 83342
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 384 cctctccttcacctggcacgacgccttca 412 |||| |||||||||||||||||||||||| Sbjct: 15999 cctcgccttcacctggcacgacgccttca 15971
>dbj|AK060633.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A12, full insert sequence Length = 1376 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 384 cctctccttcacctggcacgacgccttca 412 |||| |||||||||||||||||||||||| Sbjct: 258 cctcgccttcacctggcacgacgccttca 286
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 189 ggagcgcgacgcggccaccgccg 211 ||||||||||||||||||||||| Sbjct: 5696218 ggagcgcgacgcggccaccgccg 5696196 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 agcagcgccgcgccgcgctcc 310 ||||||||||||||||||||| Sbjct: 1643308 agcagcgccgcgccgcgctcc 1643288
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gagcgcgacgcggccaccgccg 211 |||||||||||||||||||||| Sbjct: 139928 gagcgcgacgcggccaccgccg 139949
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 gcccgcgcgctcgccctcgtcg 340 |||||||||||||||||||||| Sbjct: 823192 gcccgcgcgctcgccctcgtcg 823213
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 292 cagcgccgcgccgcgctcctgg 313 |||||||||||||||||||||| Sbjct: 1451800 cagcgccgcgccgcgctcctgg 1451779
>emb|BX933175.1| Gallus gallus finished cDNA, clone ChEST380k11 Length = 987 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 ctcgagcagcgccgcgccgcgc 307 |||||||||||||||||||||| Sbjct: 5 ctcgagcagcgccgcgccgcgc 26
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 gccaccgccgacgacgacctct 223 |||||||||||||||||||||| Sbjct: 2470955 gccaccgccgacgacgacctct 2470934 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ggccaccgccgacgacgacc 220 |||||||||||||||||||| Sbjct: 5188795 ggccaccgccgacgacgacc 5188776 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gcgccgcgccgcgctcctgg 313 |||||||||||||||||||| Sbjct: 2700454 gcgccgcgccgcgctcctgg 2700435
>emb|CR729955.2|CNS0GQ6H Tetraodon nigroviridis full-length cDNA Length = 1224 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 123 cgagaagaaggccgcggccgtcgac 147 |||||||||||||||||||| |||| Sbjct: 629 cgagaagaaggccgcggccgccgac 653
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 288 cgagcagcgccgcgccgcgctcctg 312 |||||||||||||| |||||||||| Sbjct: 21724 cgagcagcgccgcgacgcgctcctg 21748
>emb|AJ810091.1| Streptomyces fradiae p3 gene for serine protease 3 Length = 3919 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 agaaggccgcggccgtcgacc 148 ||||||||||||||||||||| Sbjct: 829 agaaggccgcggccgtcgacc 849
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 gcgcgacctccgcgccgcggccgtc 255 |||||| |||||||||||||||||| Sbjct: 21402 gcgcgagctccgcgccgcggccgtc 21426
>tpg|BK000869.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M266, complete sequence Length = 8882 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 cgacgcggccaccgccgacgacgac 219 |||||||||| |||||||||||||| Sbjct: 3179 cgacgcggccgccgccgacgacgac 3203
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 288 cgagcagcgccgcgccgcgctcctg 312 |||||| |||||||||||||||||| Sbjct: 976227 cgagcatcgccgcgccgcgctcctg 976251
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 cgacgcggccaccgccgacgacgac 219 |||||||||| |||||||||||||| Sbjct: 16982584 cgacgcggccgccgccgacgacgac 16982608
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 199 gcggccaccgccgacgacgacctctgcgccgtgcgcgacct 239 |||||| | ||||||||||||||| ||| ||||||||||| Sbjct: 38936715 gcggccgcggccgacgacgacctcgccgcggtgcgcgacct 38936675 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 268 ctcccggactcctcctccctcgagc 292 ||||||||| ||||||||||||||| Sbjct: 38936649 ctcccggacccctcctccctcgagc 38936625 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gagcagcgccgcgccgcgct 308 |||||||||||||||||||| Sbjct: 20626327 gagcagcgccgcgccgcgct 20626346
>gb|AY967407.1| Enterobacteria phage RB43, complete genome Length = 180500 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 cccaaaatttcttcacctcga 24 ||||||||||||||||||||| Sbjct: 62312 cccaaaatttcttcacctcga 62292
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 199 gcggccaccgccgacgacgacctctgcgccgtgcgcgacct 239 |||||| | ||||||||||||||| ||| ||||||||||| Sbjct: 10348 gcggccgcggccgacgacgacctcgccgcggtgcgcgacct 10308 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 268 ctcccggactcctcctccctcgagc 292 ||||||||| ||||||||||||||| Sbjct: 10282 ctcccggacccctcctccctcgagc 10258
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 199 gcggccaccgccgacgacgacctctgcgccgtgcgcgacct 239 |||||| | ||||||||||||||| ||| ||||||||||| Sbjct: 101501 gcggccgcggccgacgacgacctcgccgcggtgcgcgacct 101461 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 268 ctcccggactcctcctccctcgagc 292 ||||||||| ||||||||||||||| Sbjct: 101435 ctcccggacccctcctccctcgagc 101411
>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence Length = 106873 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 gcgcgacctccgcgccgcggccgtc 255 |||||| |||||||||||||||||| Sbjct: 12463 gcgcgagctccgcgccgcggccgtc 12487
>emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0066J23, complete sequence Length = 156934 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 cgacgcggccaccgccgacgacgac 219 |||||||||| |||||||||||||| Sbjct: 37840 cgacgcggccgccgccgacgacgac 37864
>gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, complete sequence Length = 40909 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cgacgcggccaccgccgacgacga 218 ||||||| |||||||||||||||| Sbjct: 8348 cgacgcgtccaccgccgacgacga 8371
>gb|DQ215235.1| Taeniopygia guttata clone 0058P0026C11 Nur77 downstream protein 2 variant 5-like mRNA, complete sequence Length = 653 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gcgccgcgccgcgctcctgg 313 |||||||||||||||||||| Sbjct: 38 gcgccgcgccgcgctcctgg 19
>ref|XM_465997.1| Oryza sativa (japonica cultivar-group), mRNA Length = 792 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 315 ctacgcccgcgcgctcgccctcgtcgagcccc 346 |||||||||||| ||| ||||| ||||||||| Sbjct: 792 ctacgcccgcgccctctccctcatcgagcccc 761
>ref|XM_450685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctccgcgccgcggccgtcg 256 |||||||||||||||||||| Sbjct: 664 cctccgcgccgcggccgtcg 645
>ref|NM_196928.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0006L06.25), mRNA Length = 270 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 193 cgcgacgcggccaccgccgacgacgacc 220 |||| ||| ||||||||||||||||||| Sbjct: 107 cgcggcgccgccaccgccgacgacgacc 80
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 321 ccgcgcgctcgccctcgtcgagccccgc 348 ||||||||||||| ||||||||| |||| Sbjct: 3176051 ccgcgcgctcgccatcgtcgagcgccgc 3176078
>ref|NM_193402.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2886 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gagcagcgccgcgccgcgct 308 |||||||||||||||||||| Sbjct: 1714 gagcagcgccgcgccgcgct 1733
>gb|AY007685.2| Homo sapiens telomerase catalytic subunit (TERT) and sodium channel-like protein genes, complete cds Length = 92564 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ccacgtccactccctctcct 391 |||||||||||||||||||| Sbjct: 58412 ccacgtccactccctctcct 58431
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccgcgccgcggccgtcgaga 259 |||||||||||||||||||| Sbjct: 1629262 ccgcgccgcggccgtcgaga 1629281
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 cgagcagcgccgcgccgcgc 307 |||||||||||||||||||| Sbjct: 340977 cgagcagcgccgcgccgcgc 340958
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tcgagcagcgccgcgccgcg 306 |||||||||||||||||||| Sbjct: 1769016 tcgagcagcgccgcgccgcg 1769035
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cctccgcgccgcggccgtcg 256 |||||||||||||||||||| Sbjct: 120011 cctccgcgccgcggccgtcg 120030
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 ctcgagcagcgccgcgccgcgctc 309 ||||||||||| |||||||||||| Sbjct: 851529 ctcgagcagcgacgcgccgcgctc 851552 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gaagaaggccgcggccgtcg 145 |||||||||||||||||||| Sbjct: 548396 gaagaaggccgcggccgtcg 548415
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 cgagcagcgccgcgccgcgc 307 |||||||||||||||||||| Sbjct: 1071537 cgagcagcgccgcgccgcgc 1071518
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 tgcgcgacctccgcgccgcg 249 |||||||||||||||||||| Sbjct: 4206894 tgcgcgacctccgcgccgcg 4206913
>emb|CR682939.2|CNS0FPWN Tetraodon nigroviridis full-length cDNA Length = 1015 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cactccctctccttcacctg 398 |||||||||||||||||||| Sbjct: 37 cactccctctccttcacctg 56
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 ctcgagcagcgccgcgccgcgctc 309 ||||||||||| |||||||||||| Sbjct: 2170213 ctcgagcagcgacgcgccgcgctc 2170236 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gaagaaggccgcggccgtcg 145 |||||||||||||||||||| Sbjct: 1867683 gaagaaggccgcggccgtcg 1867702
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 cgagcagcgccgcgccgcgc 307 |||||||||||||||||||| Sbjct: 952532 cgagcagcgccgcgccgcgc 952513
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 193 cgcgacgcggccaccgccgacgacgacc 220 |||| ||| ||||||||||||||||||| Sbjct: 66395 cgcggcgccgccaccgccgacgacgacc 66368
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cgcccgcgcgctcgccctcg 337 |||||||||||||||||||| Sbjct: 463154 cgcccgcgcgctcgccctcg 463135
>gb|AC010859.5| Homo sapiens chromosome , clone RP11-3D19, complete sequence Length = 171301 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 ccaacaagaaggtcagcctg 435 |||||||||||||||||||| Sbjct: 125341 ccaacaagaaggtcagcctg 125360
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cgagcagcgccgcgccgcgc 307 |||||||||||||||||||| Sbjct: 4959370 cgagcagcgccgcgccgcgc 4959389
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 ctcgagcagcgccgcgccgcgctc 309 ||||||||||| |||||||||||| Sbjct: 1743699 ctcgagcagcgacgcgccgcgctc 1743722 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 gaagaaggccgcggccgtcg 145 |||||||||||||||||||| Sbjct: 915616 gaagaaggccgcggccgtcg 915597
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctccgcgccgcggccgtcg 256 |||||||||||||||||||| Sbjct: 12231065 cctccgcgccgcggccgtcg 12231046
>gb|AC114291.2| Homo sapiens chromosome 5 clone CTD-3080P12, complete sequence Length = 202305 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ccacgtccactccctctcct 391 |||||||||||||||||||| Sbjct: 143235 ccacgtccactccctctcct 143216
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gagcagcgccgcgccgcgct 308 |||||||||||||||||||| Sbjct: 88303 gagcagcgccgcgccgcgct 88322
>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1156H12 Length = 159509 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gagcagcgccgcgccgcgct 308 |||||||||||||||||||| Sbjct: 150149 gagcagcgccgcgccgcgct 150168
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 cgccgcgctcctggcctacgcccg 323 |||| ||||||||||||||||||| Sbjct: 3540066 cgccacgctcctggcctacgcccg 3540043
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gcgcgctcgccctcgtcgag 342 |||||||||||||||||||| Sbjct: 868499 gcgcgctcgccctcgtcgag 868480
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctccgcgccgcggccgtcg 256 |||||||||||||||||||| Sbjct: 142524 cctccgcgccgcggccgtcg 142505
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cctccgcgccgcggccgtcg 256 |||||||||||||||||||| Sbjct: 14619 cctccgcgccgcggccgtcg 14600
>gb|AY954915.1| Metarhizium anisopliae var. acridum trehalose-6-phosphate synthase 1 (tps1) mRNA, complete cds Length = 1836 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 caagaccaacaagaaggtca 430 |||||||||||||||||||| Sbjct: 600 caagaccaacaagaaggtca 619
>dbj|AK108440.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-B10, full insert sequence Length = 877 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 193 cgcgacgcggccaccgccgacgacgacc 220 |||| ||| ||||||||||||||||||| Sbjct: 411 cgcggcgccgccaccgccgacgacgacc 384
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 agcagcgccgcgccgcgctc 309 |||||||||||||||||||| Sbjct: 3059558 agcagcgccgcgccgcgctc 3059577
>dbj|AP006278.1| Homo sapiens genomic DNA, chromosome 8q22.1, clone: KB1573B4, complete sequence Length = 157927 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 ccaacaagaaggtcagcctg 435 |||||||||||||||||||| Sbjct: 81598 ccaacaagaaggtcagcctg 81617
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 ctcgagcagcgccgcgccgcgctc 309 ||||||||||| |||||||||||| Sbjct: 904110 ctcgagcagcgacgcgccgcgctc 904087
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 gcggccaacgtcatgctggcgatc 120 ||||||||||||||||||| |||| Sbjct: 665921 gcggccaacgtcatgctggagatc 665898
>gb|DQ264729.1| Homo sapiens telomerase reverse transcriptase (TERT) gene, complete cds Length = 44990 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ccacgtccactccctctcct 391 |||||||||||||||||||| Sbjct: 37627 ccacgtccactccctctcct 37646 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,035,836 Number of Sequences: 3902068 Number of extensions: 3035836 Number of successful extensions: 82523 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75740 Number of HSP's gapped (non-prelim): 6768 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
