Clone Name | bastl44e11 |
---|---|
Clone Library Name | barley_pub |
>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA sequence Length = 2863 Score = 40.1 bits (20), Expect = 1.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 ccgcgatttcctccccggcgccccgccgattc 104 |||||||||||||| |||| ||||||||||| Sbjct: 1 ccgcgatttcctcctcggccgcccgccgattc 32
>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA, complete cds Length = 2887 Score = 40.1 bits (20), Expect = 1.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 ccgcgatttcctccccggcgccccgccgattc 104 |||||||||||||| |||| ||||||||||| Sbjct: 1 ccgcgatttcctcctcggccgcccgccgattc 32
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12, complete sequence Length = 155402 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ttcctccgcgatttcctcc 86 ||||||||||||||||||| Sbjct: 119475 ttcctccgcgatttcctcc 119457
>gb|AC157566.6| Mus musculus chromosome 15, clone RP23-415D19, complete sequence Length = 196738 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 aacccaaccctcccccaag 42 ||||||||||||||||||| Sbjct: 4665 aacccaaccctcccccaag 4683
>gb|AC146115.2| Pan troglodytes BAC clone RP43-38M17 from 7, complete sequence Length = 204127 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 cccaaccctcccccaagag 44 ||||||||||||||||||| Sbjct: 142349 cccaaccctcccccaagag 142331
>gb|AC124775.4| Mus musculus BAC clone RP23-60N3 from 7, complete sequence Length = 234834 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 aaccctcccccaagagaag 47 ||||||||||||||||||| Sbjct: 71536 aaccctcccccaagagaag 71554
>gb|AC122158.17| Mus musculus strain 129/Sv clone ct7-433o3 map 15, complete sequence Length = 135612 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 aacccaaccctcccccaag 42 ||||||||||||||||||| Sbjct: 73612 aacccaaccctcccccaag 73630
>gb|AC073130.3| Homo sapiens BAC clone RP11-667F14 from 7, complete sequence Length = 203403 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 cccaaccctcccccaagag 44 ||||||||||||||||||| Sbjct: 61178 cccaaccctcccccaagag 61196
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ttcctccgcgatttcctcc 86 ||||||||||||||||||| Sbjct: 20966115 ttcctccgcgatttcctcc 20966097
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ttcctccgcgatttcctcc 86 ||||||||||||||||||| Sbjct: 21728299 ttcctccgcgatttcctcc 21728281
>gb|AC156550.5| Mus musculus chromosome 15, clone RP23-353K7, complete sequence Length = 205302 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 aacccaaccctcccccaag 42 ||||||||||||||||||| Sbjct: 8822 aacccaaccctcccccaag 8804
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ttcctccgcgatttcctcc 86 ||||||||||||||||||| Sbjct: 58204 ttcctccgcgatttcctcc 58186 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 553,958 Number of Sequences: 3902068 Number of extensions: 553958 Number of successful extensions: 31945 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31907 Number of HSP's gapped (non-prelim): 38 length of query: 104 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 83 effective length of database: 17,151,101,840 effective search space: 1423541452720 effective search space used: 1423541452720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)