>dbj|AK069987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G16, full
           insert sequence
          Length = 4126

 Score =  161 bits (81), Expect = 2e-36
 Identities = 117/129 (90%)
 Strand = Plus / Plus

                                                                       
Query: 309 gatgtcggacgcctcgtcggatctcggcggcggcagggccgggcccgtggagcgcgacat 368
           |||||||||||| |||||||||||||||||||   || ||||| ||||||||||||||||
Sbjct: 394 gatgtcggacgcgtcgtcggatctcggcggcgcgcggcccggggccgtggagcgcgacat 453

                                                                       
Query: 369 cgagcaggccatcactgctctcaagaaaggagcatacctgttgaaatatggacgtagagg 428
           ||||||||||||||||||||||||||||||||||||| || |||| || || || |||||
Sbjct: 454 cgagcaggccatcactgctctcaagaaaggagcatacttgctgaagtacgggcgcagagg 513

                    
Query: 429 gaagccaaa 437
           |||||||||
Sbjct: 514 gaagccaaa 522

>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07,
             complete sequence
          Length = 156163

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 309   gatgtcggacgcctcgtcggatctcggcggcggcagggccgggcccgtggagcgcgacat 368
             |||||||||||| |||||||||||||||||||   || ||||| ||||||||||||||||
Sbjct: 90642 gatgtcggacgcgtcgtcggatctcggcggcgcgcggcccggggccgtggagcgcgacat 90583

                     
Query: 369   cgagcagg 376
             ||||||||
Sbjct: 90582 cgagcagg 90575



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 373   caggccatcactgctctcaagaaaggagcatacctgttgaaatatggacgtagagggaag 432
             ||||||||||||||||||||||||||||||||| || |||| || || || |||||||||
Sbjct: 89392 caggccatcactgctctcaagaaaggagcatacttgctgaagtacgggcgcagagggaag 89333

                  
Query: 433   ccaaa 437
             |||||
Sbjct: 89332 ccaaa 89328

>gb|AC104710.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1286_E05,
            complete sequence
          Length = 106212

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                        
Query: 309  gatgtcggacgcctcgtcggatctcggcggcggcagggccgggcccgtggagcgcgacat 368
            |||||||||||| |||||||||||||||||||   || ||||| ||||||||||||||||
Sbjct: 3391 gatgtcggacgcgtcgtcggatctcggcggcgcgcggcccggggccgtggagcgcgacat 3332

                    
Query: 369  cgagcagg 376
            ||||||||
Sbjct: 3331 cgagcagg 3324



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                        
Query: 373  caggccatcactgctctcaagaaaggagcatacctgttgaaatatggacgtagagggaag 432
            ||||||||||||||||||||||||||||||||| || |||| || || || |||||||||
Sbjct: 2141 caggccatcactgctctcaagaaaggagcatacttgctgaagtacgggcgcagagggaag 2082

                 
Query: 433  ccaaa 437
            |||||
Sbjct: 2081 ccaaa 2077

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                            
Query: 309      gatgtcggacgcctcgtcggatctcggcggcggcagggccgggcccgtggagcgcgacat 368
                |||||||||||| |||||||||||||||||||   || ||||| ||||||||||||||||
Sbjct: 18450805 gatgtcggacgcgtcgtcggatctcggcggcgcgcggcccggggccgtggagcgcgacat 18450746

                        
Query: 369      cgagcagg 376
                ||||||||
Sbjct: 18450745 cgagcagg 18450738



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                            
Query: 373      caggccatcactgctctcaagaaaggagcatacctgttgaaatatggacgtagagggaag 432
                ||||||||||||||||||||||||||||||||| || |||| || || || |||||||||
Sbjct: 18449555 caggccatcactgctctcaagaaaggagcatacttgctgaagtacgggcgcagagggaag 18449496

                     
Query: 433      ccaaa 437
                |||||
Sbjct: 18449495 ccaaa 18449491

>ref|NM_105639.1| Arabidopsis thaliana Ran GTPase binding / chromatin binding / zinc
           ion binding AT1G69710 mRNA, complete cds
          Length = 3087

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 407 tgttgaaatatggacgtagagggaagcc 434
           ||||||||||||||||||||||||||||
Sbjct: 80  tgttgaaatatggacgtagagggaagcc 107

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                            
Query: 310      atgtcggacgcctcgtcggatctcggcggcggcagggccgggccc---gtggagcgcgac 366
                ||||||||||| ||||||||||||| ||||||  |||| |  |||   ||||||||||||
Sbjct: 41924891 atgtcggacgcgtcgtcggatctcgccggcggtcgggcggccccccccgtggagcgcgac 41924832

                          
Query: 367      atcgagcagg 376
                ||||||||||
Sbjct: 41924831 atcgagcagg 41924822



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                      
Query: 372      gcaggccatcactgctctcaagaaaggagcatacctgttgaaatatggacgtag 425
                |||||| ||||| || || ||||||||||| ||| | ||||| |||||||||||
Sbjct: 41923597 gcaggctatcaccgcccttaagaaaggagcttacttattgaagtatggacgtag 41923544

>gb|AC013289.11|AC013289 Arabidopsis thaliana chromosome 1 BAC T6C23 genomic sequence, complete
             sequence
          Length = 87148

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 407   tgttgaaatatggacgtagagggaagcc 434
             ||||||||||||||||||||||||||||
Sbjct: 48096 tgttgaaatatggacgtagagggaagcc 48069

>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431G06
          Length = 140466

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                         
Query: 310   atgtcggacgcctcgtcggatctcggcggcggcagggccgggccc---gtggagcgcgac 366
             ||||||||||| ||||||||||||| ||||||  |||| |  |||   ||||||||||||
Sbjct: 26968 atgtcggacgcgtcgtcggatctcgccggcggtcgggcggccccccccgtggagcgcgac 26909

                       
Query: 367   atcgagcagg 376
             ||||||||||
Sbjct: 26908 atcgagcagg 26899



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 372   gcaggccatcactgctctcaagaaaggagcatacctgttgaaatatggacgtag 425
             |||||| ||||| || || ||||||||||| ||| | ||||| |||||||||||
Sbjct: 25674 gcaggctatcaccgcccttaagaaaggagcttacttattgaagtatggacgtag 25621

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 358     gagcgcgacatcgagcaggcca 379
               ||||||||||||||||||||||
Sbjct: 4056733 gagcgcgacatcgagcaggcca 4056712

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 275    ggcgcgatgaggagggccgtgggct 299
              |||||||||||| ||||||||||||
Sbjct: 883481 ggcgcgatgaggcgggccgtgggct 883505

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 275     ggcgcgatgaggagggccgtgggct 299
               |||||||||||| ||||||||||||
Sbjct: 1900142 ggcgcgatgaggcgggccgtgggct 1900166

>gb|AC125048.2| Mus musculus BAC clone RP23-364E18 from 5, complete sequence
          Length = 190505

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 379    atcactgctctcaagaaaggagcat 403
              |||||||||||| ||||||||||||
Sbjct: 138152 atcactgctctccagaaaggagcat 138128

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 358     gagcgcgacatcgagcaggcc 378
               |||||||||||||||||||||
Sbjct: 1243187 gagcgcgacatcgagcaggcc 1243207

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 275     ggcgcgatgaggagggccgtgggct 299
               |||||||||||| ||||||||||||
Sbjct: 2464763 ggcgcgatgaggcgggccgtgggct 2464739

>gb|AC122721.2| Homo sapiens chromosome 5 clone RP11-91I13, complete sequence
          Length = 137867

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   ccccaggctcccaaaccccct 134
             |||||||||||||||||||||
Sbjct: 25775 ccccaggctcccaaaccccct 25795

>gb|AC010430.5| Homo sapiens chromosome 5 clone CTD-2201D24, complete sequence
          Length = 57142

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 114  ccccaggctcccaaaccccct 134
            |||||||||||||||||||||
Sbjct: 5648 ccccaggctcccaaaccccct 5628

>gb|AC008504.7| Homo sapiens chromosome 5 clone CTC-444E21, complete sequence
          Length = 74253

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   ccccaggctcccaaaccccct 134
             |||||||||||||||||||||
Sbjct: 18031 ccccaggctcccaaaccccct 18011

>gb|AY026914.1| Pseudomonas putida strain P111 czrBA operon, partial sequence; ben
            operon and ant operon, complete sequence; and catRBCA
            operon, partial sequence; and unknown gene
          Length = 15769

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 301  acgccgatgatgtcggacgcctcgtcgga 329
            |||||| |||||| |||||||||||||||
Sbjct: 8793 acgccggtgatgtaggacgcctcgtcgga 8765

>gb|AE004678.1| Pseudomonas aeruginosa PAO1, section 239 of 529 of the complete
            genome
          Length = 11593

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 301  acgccgatgatgtcggacgcctcgtcgga 329
            |||||| |||||| |||||||||||||||
Sbjct: 7854 acgccggtgatgtaggacgcctcgtcgga 7882

>gb|AF525490.2| Streptomyces griseus fredericamycin biosynthetic gene cluster,
            complete sequence
          Length = 33064

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 175  cgccgccgggcgtgctccagc 195
            |||||||||||||||||||||
Sbjct: 8989 cgccgccgggcgtgctccagc 8969

>ref|NM_189767.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3261

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 374 aggccatcactgctctcaagaaaggagcatacctgttgaaatatggacgtag 425
           |||| ||||| || || ||||||||||| ||| | ||||| |||||||||||
Sbjct: 47  aggctatcaccgcccttaagaaaggagcttacttattgaagtatggacgtag 98

>emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20 on chromosome 1p34.4-36.13
            Contains the 5' UTR of the EIF4G3 gene for  eukaryotic
            translation initiation factor 4 gamma, 3, the 3' end of
            the ECE1 gene for endothelin converting enzyme 1, a novel
            gene and a CpG island, complete sequence
          Length = 109906

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  cctcctccccccaggctccc 125
            ||||||||||||||||||||
Sbjct: 4526 cctcctccccccaggctccc 4507

>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    gatctcggcggcggcagggc 347
              ||||||||||||||||||||
Sbjct: 209787 gatctcggcggcggcagggc 209806

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    gcgacatcgagcaggccatc 381
              ||||||||||||||||||||
Sbjct: 344430 gcgacatcgagcaggccatc 344449

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 278     gcgatgaggagggccgtggg 297
               ||||||||||||||||||||
Sbjct: 1527475 gcgatgaggagggccgtggg 1527494


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,499,166
Number of Sequences: 3902068
Number of extensions: 2499166
Number of successful extensions: 51582
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51026
Number of HSP's gapped (non-prelim): 556
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)