ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl44d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane... 62 4e-07
2gb|AY860110.1| Micromonospora rosaria strain SCC2095 plasmid pMR... 44 0.083
3emb|AL158052.10| Human DNA sequence from clone RP11-570J20 on ch... 44 0.083
4gb|AC006450.13|AC006450 Homo sapiens chromosome 9, clone RP11-85... 44 0.083
5gb|AC163391.4| Mus musculus chromosome 3, clone RP23-173N16, com... 42 0.33
6gb|AC102465.11| Mus musculus chromosome 3, clone RP24-333O23, co... 42 0.33
7gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, co... 42 0.33
8gb|AY022083.1| Oryza sativa microsatellite MRG4408 containing (T... 40 1.3
9gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome... 40 1.3
10gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare str... 40 1.3
11gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Canc... 40 1.3
12dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.3
13gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 1.3
14gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome... 40 1.3
15emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chr... 40 1.3
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 1.3
17gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome... 38 5.1
18gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, co... 38 5.1
19gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 38 5.1
20gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 38 5.1
21gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 38 5.1
22gb|AC129020.4| Mus musculus BAC clone RP23-234A5 from chromosome... 38 5.1
23gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, com... 38 5.1
24gb|AC015933.9| Homo sapiens chromosome 18, clone CTD-2023G8, com... 38 5.1
25emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 38 5.1
26emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 38 5.1
27emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 38 5.1
28emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; s... 38 5.1
29emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; s... 38 5.1
30gb|AC098865.2| Homo sapiens BAC clone RP11-374O3 from 4, complet... 38 5.1
31gb|AC092629.2| Homo sapiens BAC clone RP11-280J8 from 4, complet... 38 5.1
32gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence 38 5.1
33dbj|AK075611.1| Mus musculus adult male brain cDNA, RIKEN full-l... 38 5.1
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.1
35gb|AC154312.2| Mus musculus BAC clone RP23-354D20 from chromosom... 38 5.1
36dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 5.1
37gb|AC009298.3| Homo sapiens BAC clone RP11-17I6 from 2, complete... 38 5.1
38dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 5.1
39emb|AJ340490.1|HSA340490 Homo sapiens genomic sequence surroundi... 38 5.1
40gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, compl... 38 5.1
41gb|AC151833.3| Mus musculus BAC clone RP23-374P15 from 14, compl... 38 5.1
42gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 38 5.1
43gb|AC166329.3| Pan troglodytes BAC clone CH251-143I6 from chromo... 38 5.1
44dbj|AP003123.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 5.1 
>dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane proton-translocating
           inorganic pyrophosphatase, complete cds
          Length = 2649

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 77  cgtcggcctgccagcctgacagccatggcgatcct 111
           |||||||||||||||| ||||||||||||||||||
Sbjct: 1   cgtcggcctgccagccagacagccatggcgatcct 35
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>gb|AY860110.1| Micromonospora rosaria strain SCC2095 plasmid pMR2, complete sequence
          Length = 11188

 Score = 44.1 bits (22), Expect = 0.083
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 37   cccaccccgcccgccgccgtccggtc 62
            ||||||||| ||||||||||||||||
Sbjct: 2374 cccaccccggccgccgccgtccggtc 2349
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>emb|AL158052.10| Human DNA sequence from clone RP11-570J20 on chromosome 9q33.1-34.12
             Contains three novel genes, the 3' end of the LHX2 gene
             for LIM homeobox protein 2 and four CpG islands, complete
             sequence
          Length = 221887

 Score = 44.1 bits (22), Expect = 0.083
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 37    cccaccccgcccgccgccgtcc 58
             ||||||||||||||||||||||
Sbjct: 18119 cccaccccgcccgccgccgtcc 18098
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>gb|AC006450.13|AC006450 Homo sapiens chromosome 9, clone RP11-85O21, complete sequence
          Length = 177555

 Score = 44.1 bits (22), Expect = 0.083
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 37    cccaccccgcccgccgccgtcc 58
             ||||||||||||||||||||||
Sbjct: 33152 cccaccccgcccgccgccgtcc 33173
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>gb|AC163391.4| Mus musculus chromosome 3, clone RP23-173N16, complete sequence
          Length = 187855

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    gccagcctgacagccatggcg 106
             |||||||||||||||||||||
Sbjct: 10456 gccagcctgacagccatggcg 10436
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>gb|AC102465.11| Mus musculus chromosome 3, clone RP24-333O23, complete sequence
          Length = 138893

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    gccagcctgacagccatggcg 106
             |||||||||||||||||||||
Sbjct: 25309 gccagcctgacagccatggcg 25289
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>gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, complete sequence
          Length = 149484

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 86     gccagcctgacagccatggcg 106
              |||||||||||||||||||||
Sbjct: 110603 gccagcctgacagccatggcg 110583
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>gb|AY022083.1| Oryza sativa microsatellite MRG4408 containing (TC)X15, genomic
           sequence
          Length = 230

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  tcccaccccgcccgccgccg 55
           ||||||||||||||||||||
Sbjct: 227 tcccaccccgcccgccgccg 208
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>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBb0061I18, complete sequence
          Length = 143163

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tcccaccccgcccgccgccg 55
             ||||||||||||||||||||
Sbjct: 14658 tcccaccccgcccgccgccg 14677
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>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0068A07, from Chromosome 10, complete sequence
          Length = 154505

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    tcccaccccgcccgccgccg 55
             ||||||||||||||||||||
Sbjct: 10942 tcccaccccgcccgccgccg 10923
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>gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 215780

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     cccccctcatcccaccccgc 46
              ||||||||||||||||||||
Sbjct: 101292 cccccctcatcccaccccgc 101311
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 36       tcccaccccgcccgccgccg 55
                ||||||||||||||||||||
Sbjct: 12489517 tcccaccccgcccgccgccg 12489498
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 72      ggtttcgtcggcctgccagc 91
               ||||||||||||||||||||
Sbjct: 2831217 ggtttcgtcggcctgccagc 2831198
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>gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome 16, complete sequence
          Length = 178222

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    gcctgccagcctgacagccatggc 105
             ||||||||||||| ||||||||||
Sbjct: 45785 gcctgccagcctgccagccatggc 45762
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>emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chromosome 2, complete
             sequence
          Length = 178735

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    cccccctcatcccaccccgcccgc 50
             |||||| |||||||||||||||||
Sbjct: 81012 ccccccccatcccaccccgcccgc 80989
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 36       tcccaccccgcccgccgccg 55
                ||||||||||||||||||||
Sbjct: 12496857 tcccaccccgcccgccgccg 12496838
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>gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0115F21, complete sequence
          Length = 128493

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    atcccaccccgcccgccgc 53
             |||||||||||||||||||
Sbjct: 85397 atcccaccccgcccgccgc 85415
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>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence
          Length = 355714

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      agagagagcgagagacccgtccg 25
              |||||||| ||||||||||||||
Sbjct: 228429 agagagagagagagacccgtccg 228451
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 37      cccaccccgcccgccgccg 55
               |||||||||||||||||||
Sbjct: 2318393 cccaccccgcccgccgccg 2318411



 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     ccccgcccgccgccgtccg 59
              |||||||||||||||||||
Sbjct: 323518 ccccgcccgccgccgtccg 323500
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 37     cccaccccgcccgccgccgtccg 59
              |||||| ||||||||||||||||
Sbjct: 261668 cccaccacgcccgccgccgtccg 261646
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 37      cccaccccgcccgccgccg 55
               |||||||||||||||||||
Sbjct: 1185464 cccaccccgcccgccgccg 1185446



 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 41      ccccgcccgccgccgtccg 59
               |||||||||||||||||||
Sbjct: 1054539 ccccgcccgccgccgtccg 1054521
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>gb|AC129020.4| Mus musculus BAC clone RP23-234A5 from chromosome 16, complete sequence
          Length = 192668

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 82    gcctgccagcctgacagccatgg 104
             ||||||||||||| |||||||||
Sbjct: 49891 gcctgccagcctgccagccatgg 49913
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>gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, complete sequence
          Length = 197295

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 22     tccgtcccccctcatcccacccc 44
              ||||||||||||| |||||||||
Sbjct: 165577 tccgtcccccctcctcccacccc 165599
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>gb|AC015933.9| Homo sapiens chromosome 18, clone CTD-2023G8, complete sequence
          Length = 249021

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     tcccccctcatcccacccc 44
              |||||||||||||||||||
Sbjct: 120715 tcccccctcatcccacccc 120697
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 37      cccaccccgcccgccgccg 55
               |||||||||||||||||||
Sbjct: 1066948 cccaccccgcccgccgccg 1066930



 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     ccccgcccgccgccgtccg 59
              |||||||||||||||||||
Sbjct: 935539 ccccgcccgccgccgtccg 935521
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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     ccccgcccgccgccgtccg 59
              |||||||||||||||||||
Sbjct: 211783 ccccgcccgccgccgtccg 211765
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>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 40     accccgcccgccgccgtcc 58
              |||||||||||||||||||
Sbjct: 171232 accccgcccgccgccgtcc 171250
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>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2
          Length = 178073

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 41     ccccgcccgccgccgtccg 59
              |||||||||||||||||||
Sbjct: 164098 ccccgcccgccgccgtccg 164116
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>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    ccccgcccgccgccgtccg 59
             |||||||||||||||||||
Sbjct: 13976 ccccgcccgccgccgtccg 13958
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>gb|AC098865.2| Homo sapiens BAC clone RP11-374O3 from 4, complete sequence
          Length = 54348

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    tcccccctcatcccacccc 44
             |||||||||||||||||||
Sbjct: 52877 tcccccctcatcccacccc 52859
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>gb|AC092629.2| Homo sapiens BAC clone RP11-280J8 from 4, complete sequence
          Length = 148673

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 26  tcccccctcatcccacccc 44
           |||||||||||||||||||
Sbjct: 529 tcccccctcatcccacccc 511
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>gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence
          Length = 209211

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 22    tccgtcccccctcatcccacccc 44
             |||||||||||||| ||||||||
Sbjct: 10596 tccgtcccccctcaccccacccc 10618
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>dbj|AK075611.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched
            library, clone:0710008A09 product:SWI/SNF related, matrix
            associated, actin dependent regulator of chromatin,
            subfamily d, member 1, full insert sequence
          Length = 2476

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 25   gtcccccctcatcccaccccgcc 47
            ||||||||||| |||||||||||
Sbjct: 1120 gtcccccctcaccccaccccgcc 1142
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 35      atcccaccccgcccgccgc 53
               |||||||||||||||||||
Sbjct: 6522735 atcccaccccgcccgccgc 6522753
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>gb|AC154312.2| Mus musculus BAC clone RP23-354D20 from chromosome 16, complete
             sequence
          Length = 197884

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    tcccccctcatcccacccc 44
             |||||||||||||||||||
Sbjct: 63385 tcccccctcatcccacccc 63367
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 40      accccgcccgccgccgtcc 58
               |||||||||||||||||||
Sbjct: 4053628 accccgcccgccgccgtcc 4053610
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>gb|AC009298.3| Homo sapiens BAC clone RP11-17I6 from 2, complete sequence
          Length = 165242

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 36     tcccaccccgcccgccgcc 54
              |||||||||||||||||||
Sbjct: 103618 tcccaccccgcccgccgcc 103600
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 37      cccaccccgcccgccgccg 55
               |||||||||||||||||||
Sbjct: 5806820 cccaccccgcccgccgccg 5806802



 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 44      cgcccgccgccgtccggtccgtc 66
               ||||||| |||||||||||||||
Sbjct: 2100551 cgcccgctgccgtccggtccgtc 2100529
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>emb|AJ340490.1|HSA340490 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-WH19R
          Length = 702

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 41  ccccgcccgccgccgtccg 59
           |||||||||||||||||||
Sbjct: 326 ccccgcccgccgccgtccg 344
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>gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, complete sequence
          Length = 208338

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     cagagagagcgagagaccc 20
             |||||||||||||||||||
Sbjct: 85616 cagagagagcgagagaccc 85634
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>gb|AC151833.3| Mus musculus BAC clone RP23-374P15 from 14, complete sequence
          Length = 197918

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      cagagagagcgagagaccc 20
              |||||||||||||||||||
Sbjct: 163909 cagagagagcgagagaccc 163927
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 47      ccgccgccgtccggtccgt 65
               |||||||||||||||||||
Sbjct: 1713058 ccgccgccgtccggtccgt 1713040
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>gb|AC166329.3| Pan troglodytes BAC clone CH251-143I6 from chromosome unknown, complete
             sequence
          Length = 173896

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    tcccccctcatcccacccc 44
             |||||||||||||||||||
Sbjct: 46723 tcccccctcatcccacccc 46705
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>dbj|AP003123.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-402K1, complete
             sequence
          Length = 187735

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    tcccccctcatcccacccc 44
             |||||||||||||||||||
Sbjct: 86202 tcccccctcatcccacccc 86220


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 722,859
Number of Sequences: 3902068
Number of extensions: 722859
Number of successful extensions: 72481
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71228
Number of HSP's gapped (non-prelim): 1253
length of query: 112
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 91
effective length of database: 17,151,101,840
effective search space: 1560750267440
effective search space used: 1560750267440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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