Clone Name | bastl44d05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) ... | 31 | 0.99 | 2 | B3A2_MOUSE (P13808) Anion exchange protein 2 (Non-erythroid band... | 29 | 2.9 | 3 | PRTP_HCMVA (P16724) Probable processing and transport protein UL... | 28 | 6.4 |
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>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 30.8 bits (68), Expect = 0.99 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%) Frame = -1 Query: 184 ALQPWQPSPSTSQRG---VPLLLRARRKPSRGAKSPS 83 A+ PW+PSPS ++ VP+L + KPS SPS Sbjct: 75 AIAPWEPSPSPTETAWTVVPVLKSSALKPSTVQFSPS 111
>B3A2_MOUSE (P13808) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 29.3 bits (64), Expect = 2.9 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = -1 Query: 175 PWQPSPSTSQRGVPLLLR----ARRKPSRGAKSPSRQ 77 P QPSP+T+ V L+ A RKP R + SP Q Sbjct: 140 PQQPSPATTPSAVQFFLQEDEGAERKPERTSPSPPTQ 176
>PRTP_HCMVA (P16724) Probable processing and transport protein UL56 (HFLF0| protein) Length = 850 Score = 28.1 bits (61), Expect = 6.4 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Frame = -1 Query: 178 QPWQPS--PSTSQRGVPLLLRARRKPSRGAKS 89 +PW PS PS+S GV +RA RK R A S Sbjct: 799 RPWLPSPYPSSSTAGVSRRVRATRKRPRRASS 830 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,095,727 Number of Sequences: 219361 Number of extensions: 334946 Number of successful extensions: 1169 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1168 length of database: 80,573,946 effective HSP length: 52 effective length of database: 69,167,174 effective search space used: 1660012176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)