ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl44d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 86 6e-14
2dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic D... 86 6e-14
3dbj|AK072600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 6e-14
4ref|NM_191124.1| Oryza sativa (japonica cultivar-group), predic... 80 3e-12
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.012
6dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.012
7gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.19
8gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.19
9emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.19
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
11dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 44 0.19
12dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
13dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
14gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.19
15ref|XM_466044.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.75
16ref|NM_191416.1| Oryza sativa (japonica cultivar-group), predic... 42 0.75
17gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 42 0.75
18ref|XM_951809.1| Neurospora crassa OR74A hypothetical protein (N... 42 0.75
19ref|XM_328134.1| Neurospora crassa OR74A hypothetical protein (N... 42 0.75
20gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 0.75
21gb|AY166599.1| Oryza sativa (indica cultivar-group) ATP-dependen... 42 0.75
22gb|U93712.2| Cricetulus griseus putative CD98 protein mRNA, comp... 42 0.75
23gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 1... 42 0.75
24emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 42 0.75
25emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 42 0.75
26emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 42 0.75
27emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 42 0.75
28emb|AL513408.1|NC61D6 Neurospora crassa DNA linkage group II Cos... 42 0.75
29emb|AL355927.1|NCB1D1 Neurospora crassa DNA linkage group II BAC... 42 0.75
30gb|AE005744.1| Caulobacter crescentus CB15 section 70 of 359 of ... 42 0.75
31dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 0.75
32dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
34dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
35dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
36dbj|AK059179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.75
37gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.75
38dbj|AB001869.1| Anolis carolinensis Brain-2 gene, complete cds 42 0.75
39ref|NM_188528.1| Oryza sativa (japonica cultivar-group), Ozsa819... 40 3.0
40ref|XM_464222.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.0
41ref|XM_506726.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.0
42ref|XM_472974.1| Oryza sativa (japonica cultivar-group), predic... 40 3.0
43gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
44gb|AY023175.1| Oryza sativa microsatellite MRG5500 containing (G... 40 3.0
45ref|XM_370463.1| Magnaporthe grisea 70-15 chromosome II hypothet... 40 3.0
46ref|XM_420095.1| PREDICTED: Gallus gallus procollagen-proline, 2... 40 3.0
47ref|XM_584581.2| PREDICTED: Bos taurus similar to PR-domain zinc... 40 3.0
48gb|AY596617.1| Saccharum officinarum clone SCCCLR1024G10, comple... 40 3.0
49gb|AF407707.1| Uncultured bacterium clone G55 16S ribosomal RNA ... 40 3.0
50ref|NM_001426.2| Homo sapiens engrailed homolog 1 (EN1), mRNA 40 3.0
51gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
52gb|DQ184947.1| Darevskia portschinskii internal transcribed spac... 40 3.0
53gb|DQ184945.1| Darevskia valentini internal transcribed spacer 2... 40 3.0
54gb|DQ184943.1| Gallotia galloti internal transcribed spacer 2, p... 40 3.0
55emb|AL365502.57| Human DNA sequence from clone RP11-48C7 on chro... 40 3.0
56emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 40 3.0
57emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 3.0
58emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 3.0
59emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4,... 40 3.0
60emb|AL353786.16| Human DNA sequence from clone RP5-1175B15 on ch... 40 3.0
61emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, ... 40 3.0
62gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 3.0
63emb|CR610831.1| full-length cDNA clone CS0DA008YK23 of Neuroblas... 40 3.0
64gb|AY646810.1| Lacerta strigata internal transcribed spacer 2, p... 40 3.0
65gb|AY646809.1| Lacerta armeniaca internal transcribed spacer 2, ... 40 3.0
66dbj|AB201308.1| uncultured crenarchaeote 45-H-12 genomic DNA, Fo... 40 3.0
67gb|CP000249.1| Frankia sp. CcI3, complete genome 40 3.0
68dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
69gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete s... 40 3.0
70gb|AY190527.1| Pseudorabies virus strain Ea UL50 protein (UL50) ... 40 3.0
71dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
72dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 3.0
73gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.0
74gb|AC012665.8| Homo sapiens BAC clone RP11-19E11 from 2, complet... 40 3.0
75gb|J04603.1|HUMTPI1A Homo sapiens triosephosphate isomerase (TPI... 40 3.0
76dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
77dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
78gb|L12698.1|HUMEN1A01 Homo sapiens engrailed protein (EN1) gene,... 40 3.0
79dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
80dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
81dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
82dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
83gb|AE005089.1| Halobacterium sp. NRC-1 section 120 of 170 of the... 40 3.0
84dbj|AB108850.1| Chlamydomonas reinhardtii mmp3 mRNA for matrix m... 40 3.0
85dbj|AK101712.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
86dbj|AK101610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
87dbj|AK069562.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
88emb|AL162171.4|CNS01RHP Human chromosome 14 DNA sequence BAC R-5... 40 3.0
89gb|AC006443.1|AC006443 Homo sapiens chromosome 9, clone hRPK.49... 40 3.0
90gb|BC088848.1| Rattus norvegicus similar to hypothetical protein... 40 3.0
91gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 3.0
92ref|NM_001014075.1| Rattus norvegicus similar to hypothetical pr... 40 3.0
93emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4,... 40 3.0
94gb|M10036.1|HUMTPI Human triosephosphate isomerase mRNA, complet... 40 3.0
95emb|X69723.1|HSTPI1G H.sapiens TPI1 gene for triosephosphate iso... 40 3.0
96gb|M57946.1|CHPTPI P.troglodytes triose-phosphate isomerase (TPI... 40 3.0
97emb|AL591762.13| Mouse DNA sequence from clone RP23-465I6 on chr... 40 3.0 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                            
Query: 160      gagatggctgccatggttggagcgcgcagggccctcctcgccgcccgctactcccctcgc 219
                |||||||| |||||||||||||| |||||||||||||| || ||||| ||||| ||||||
Sbjct: 30772801 gagatggccgccatggttggagcacgcagggccctcctagctgcccgttactcgcctcgc 30772860

                           
Query: 220      ggcgagctcgc 230
                |||| ||||||
Sbjct: 30772861 ggcgcgctcgc 30772871



 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 26       gcgccgccgccccggccgccg 46
                |||||||||||||||||||||
Sbjct: 32516680 gcgccgccgccccggccgccg 32516660



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 24       ccgcgccgccgccccggccgccgc 47
                |||||||||||| |||||||||||
Sbjct: 41750603 ccgcgccgccgcgccggccgccgc 41750626



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 24      ccgcgccgccgccccggccgccgc 47
               ||||||||||||| ||||||||||
Sbjct: 6786628 ccgcgccgccgccgcggccgccgc 6786605
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>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0021A09
          Length = 127973

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                         
Query: 160   gagatggctgccatggttggagcgcgcagggccctcctcgccgcccgctactcccctcgc 219
             |||||||| |||||||||||||| |||||||||||||| || ||||| ||||| ||||||
Sbjct: 62076 gagatggccgccatggttggagcacgcagggccctcctagctgcccgttactcgcctcgc 62135

                        
Query: 220   ggcgagctcgc 230
             |||| ||||||
Sbjct: 62136 ggcgcgctcgc 62146
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>dbj|AK072600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130A18, full
           insert sequence
          Length = 2854

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 160 gagatggctgccatggttggagcgcgcagggccctcctcgccgcccgctactcccctcgc 219
           |||||||| |||||||||||||| |||||||||||||| || ||||| ||||| ||||||
Sbjct: 152 gagatggccgccatggttggagcacgcagggccctcctagctgcccgttactcgcctcgc 211

                      
Query: 220 ggcgagctcgc 230
           |||| ||||||
Sbjct: 212 ggcgcgctcgc 222
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>ref|NM_191124.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2391

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 163 atggctgccatggttggagcgcgcagggccctcctcgccgcccgctactcccctcgcggc 222
           ||||| |||||||||||||| |||||||||||||| || ||||| ||||| |||||||||
Sbjct: 1   atggccgccatggttggagcacgcagggccctcctagctgcccgttactcgcctcgcggc 60

                   
Query: 223 gagctcgc 230
           | ||||||
Sbjct: 61  gcgctcgc 68
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 24       ccgcgccgccgccccggccgccgc 47
                ||||||||||||||||||||||||
Sbjct: 16098132 ccgcgccgccgccccggccgccgc 16098109
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>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0038F09
          Length = 166568

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 24    ccgcgccgccgccccggccgccgc 47
             ||||||||||||||||||||||||
Sbjct: 68465 ccgcgccgccgccccggccgccgc 68442
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 24      ccgcgccgccgccccggccgcc 45
               ||||||||||||||||||||||
Sbjct: 3354542 ccgcgccgccgccccggccgcc 3354563
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 24     ccgcgccgccgccccggccgcc 45
              ||||||||||||||||||||||
Sbjct: 393582 ccgcgccgccgccccggccgcc 393603
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 24     ccgcgccgccgccccggccgcc 45
              ||||||||||||||||||||||
Sbjct: 203306 ccgcgccgccgccccggccgcc 203327
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 24       ccgcgccgccgccccggccgcc 45
                ||||||||||||||||||||||
Sbjct: 22329491 ccgcgccgccgccccggccgcc 22329512



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 24       ccgcgccgccgccccggccgccgc 47
                |||||||||||| |||||||||||
Sbjct: 12294355 ccgcgccgccgcaccggccgccgc 12294378
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 24      ccgcgccgccgccccggccgccgcaccacc 53
               ||||||||||||| | ||||||||||||||
Sbjct: 1622168 ccgcgccgccgccgccgccgccgcaccacc 1622197
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>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 24    ccgcgccgccgccccggccgcc 45
             ||||||||||||||||||||||
Sbjct: 26474 ccgcgccgccgccccggccgcc 26495
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>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0048G02
          Length = 155542

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 24     ccgcgccgccgccccggccgcc 45
              ||||||||||||||||||||||
Sbjct: 145867 ccgcgccgccgccccggccgcc 145888
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 24     ccgcgccgccgccccggccgcc 45
              ||||||||||||||||||||||
Sbjct: 187792 ccgcgccgccgccccggccgcc 187813



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     gccgccgccccggccgccgc 47
              ||||||||||||||||||||
Sbjct: 790815 gccgccgccccggccgccgc 790796
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>ref|XM_466044.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2817

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 27 cgccgccgccccggccgccgc 47
          |||||||||||||||||||||
Sbjct: 72 cgccgccgccccggccgccgc 52
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>ref|NM_191416.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 486

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 26 gcgccgccgccccggccgccg 46
          |||||||||||||||||||||
Sbjct: 61 gcgccgccgccccggccgccg 41
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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 114    cgccgcgcacggagcagcaggggca 138
              |||||||||||||||||||| ||||
Sbjct: 265403 cgccgcgcacggagcagcagcggca 265379
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>ref|XM_951809.1| Neurospora crassa OR74A hypothetical protein (NCU01696.1) partial
            mRNA
          Length = 2454

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 27   cgccgccgccccggccgccgc 47
            |||||||||||||||||||||
Sbjct: 1581 cgccgccgccccggccgccgc 1601
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>ref|XM_328134.1| Neurospora crassa OR74A hypothetical protein (NCU01696.1) partial
            mRNA
          Length = 2454

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 27   cgccgccgccccggccgccgc 47
            |||||||||||||||||||||
Sbjct: 1581 cgccgccgccccggccgccgc 1601
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 27      cgccgccgccccggccgccgc 47
               |||||||||||||||||||||
Sbjct: 1237927 cgccgccgccccggccgccgc 1237907
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>gb|AY166599.1| Oryza sativa (indica cultivar-group) ATP-dependent Clp protease
           ATP-binding subunit precursor (CLPD1) mRNA, complete
           cds; nuclear gene for chloroplast product
          Length = 3142

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 27  cgccgccgccccggccgccgc 47
           |||||||||||||||||||||
Sbjct: 177 cgccgccgccccggccgccgc 157
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>gb|U93712.2| Cricetulus griseus putative CD98 protein mRNA, complete cds
          Length = 1858

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 28  gccgccgccccggccgccgca 48
           |||||||||||||||||||||
Sbjct: 184 gccgccgccccggccgccgca 164
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>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09,
             complete sequence
          Length = 135363

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    gcgccgccgccccggccgccg 46
             |||||||||||||||||||||
Sbjct: 44811 gcgccgccgccccggccgccg 44831
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     cgccgccgccccggccgccgc 47
              |||||||||||||||||||||
Sbjct: 165777 cgccgccgccccggccgccgc 165757
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     cgccgccgccccggccgccgc 47
              |||||||||||||||||||||
Sbjct: 313157 cgccgccgccccggccgccgc 313137
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    cgccgccccggccgccgcacc 50
             |||||||||||||||||||||
Sbjct: 80580 cgccgccccggccgccgcacc 80560
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     gcgccgccgccccggccgccg 46
              |||||||||||||||||||||
Sbjct: 228195 gcgccgccgccccggccgccg 228175
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>emb|AL513408.1|NC61D6 Neurospora crassa DNA linkage group II Cosmid clone 61D6
          Length = 38848

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    cgccgccgccccggccgccgc 47
             |||||||||||||||||||||
Sbjct: 33709 cgccgccgccccggccgccgc 33729
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>emb|AL355927.1|NCB1D1 Neurospora crassa DNA linkage group II BAC clone B1D1
          Length = 76072

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    cgccgccgccccggccgccgc 47
             |||||||||||||||||||||
Sbjct: 74224 cgccgccgccccggccgccgc 74204
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>gb|AE005744.1| Caulobacter crescentus CB15 section 70 of 359 of the complete genome
          Length = 11532

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 27   cgccgccgccccggccgccgc 47
            |||||||||||||||||||||
Sbjct: 7711 cgccgccgccccggccgccgc 7731
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 26      gcgccgccgccccggccgccg 46
               |||||||||||||||||||||
Sbjct: 4369352 gcgccgccgccccggccgccg 4369372



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 28      gccgccgccccggccgccgc 47
               ||||||||||||||||||||
Sbjct: 4372342 gccgccgccccggccgccgc 4372361



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 24      ccgcgccgccgccccggccgccgc 47
               |||||||||||||| |||||||||
Sbjct: 1324589 ccgcgccgccgccctggccgccgc 1324612
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 26      gcgccgccgccccggccgccg 46
               |||||||||||||||||||||
Sbjct: 5988728 gcgccgccgccccggccgccg 5988748



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 27       cgccgccgccccggccgccg 46
                ||||||||||||||||||||
Sbjct: 26049980 cgccgccgccccggccgccg 26049961
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 27       cgccgccgccccggccgccgc 47
                |||||||||||||||||||||
Sbjct: 19271085 cgccgccgccccggccgccgc 19271065



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 27      cgccgccgccccggccgccgcaccaccg 54
               |||||||||| | |||||||||||||||
Sbjct: 3500015 cgccgccgccgccgccgccgcaccaccg 3500042
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>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0665A11
          Length = 166421

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     gcgccgccgccccggccgccg 46
              |||||||||||||||||||||
Sbjct: 104201 gcgccgccgccccggccgccg 104181
to top
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0458B05
          Length = 144917

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    cgccgccgccccggccgccgc 47
             |||||||||||||||||||||
Sbjct: 38883 cgccgccgccccggccgccgc 38863
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>dbj|AK059179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-F11, full
           insert sequence
          Length = 1046

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 26  gcgccgccgccccggccgccg 46
           |||||||||||||||||||||
Sbjct: 251 gcgccgccgccccggccgccg 231
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 26      gcgccgccgccccggccgccg 46
               |||||||||||||||||||||
Sbjct: 6055205 gcgccgccgccccggccgccg 6055225



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 27       cgccgccgccccggccgccg 46
                ||||||||||||||||||||
Sbjct: 26368676 cgccgccgccccggccgccg 26368657
to top
>dbj|AB001869.1| Anolis carolinensis Brain-2 gene, complete cds
          Length = 2954

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 29   ccgccgccccggccgccgcaccacc 53
            |||||||||| ||||||||||||||
Sbjct: 1566 ccgccgcccccgccgccgcaccacc 1590
to top
>ref|NM_188528.1| Oryza sativa (japonica cultivar-group), Ozsa8197 predicted mRNA
          Length = 2442

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 24  ccgcgccgccgccccggccgccgc 47
           ||||||||||||| ||||||||||
Sbjct: 493 ccgcgccgccgccgcggccgccgc 470
to top
>ref|XM_464222.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                      
Query: 27 cgccgccgccccggccgccgcaccaccg 54
          |||||||||| | |||||||||||||||
Sbjct: 97 cgccgccgccgccgccgccgcaccaccg 70
to top
>ref|XM_506726.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1661_C12.27
           mRNA
          Length = 1937

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 27  cgccgccgccccggccgccgcaccaccg 54
           |||||||||| | |||||||||||||||
Sbjct: 134 cgccgccgccgccgccgccgcaccaccg 107
to top
>ref|XM_472974.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 309

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 28 gccgccgccccggccgccgc 47
          ||||||||||||||||||||
Sbjct: 92 gccgccgccccggccgccgc 73
to top
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
             complete sequence
          Length = 158749

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    ccgcgccgccgccccggccgccgc 47
             |||||||||||| |||||||||||
Sbjct: 99476 ccgcgccgccgcaccggccgccgc 99453
to top
>gb|AY023175.1| Oryza sativa microsatellite MRG5500 containing (GCG)X8, closest to
           marker G1064, genomic sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 27  cgccgccgccccggccgccgcaccaccg 54
           |||||||||| | |||||||||||||||
Sbjct: 121 cgccgccgccgccgccgccgcaccaccg 94
to top
>ref|XM_370463.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
            (MG06960.4) partial mRNA
          Length = 2031

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   gccgccgccccggccgccgc 47
            ||||||||||||||||||||
Sbjct: 1042 gccgccgccccggccgccgc 1061
to top
>ref|XM_420095.1| PREDICTED: Gallus gallus procollagen-proline, 2-oxoglutarate
           4-dioxygenase (proline 4-hydroxylase), beta polypeptide
           (protein disulfide isomerase; thyroid hormone binding
           protein p55) (P4HB), mRNA
          Length = 3503

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 175 gccgccgccccggccgccgc 156
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>ref|XM_584581.2| PREDICTED: Bos taurus similar to PR-domain zinc finger protein 8
            (LOC507890), mRNA
          Length = 2186

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 24   ccgcgccgccgccccggccgccgc 47
            |||||||||||||| |||||||||
Sbjct: 1458 ccgcgccgccgcccgggccgccgc 1435
to top
>gb|AY596617.1| Saccharum officinarum clone SCCCLR1024G10, complete sequence
          Length = 2031

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 24  ccgcgccgccgccccggccg 43
           ||||||||||||||||||||
Sbjct: 409 ccgcgccgccgccccggccg 428
to top
>gb|AF407707.1| Uncultured bacterium clone G55 16S ribosomal RNA gene, partial
           sequence
          Length = 1564

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  ggggctcttcgccccccgcg 105
           ||||||||||||||||||||
Sbjct: 484 ggggctcttcgccccccgcg 465
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>ref|NM_001426.2| Homo sapiens engrailed homolog 1 (EN1), mRNA
          Length = 2943

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 24   ccgcgccgccgccccggccgccgc 47
            |||| |||||||||||||||||||
Sbjct: 1009 ccgccccgccgccccggccgccgc 986
to top
>gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0024E08, complete sequence
          Length = 131946

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    cgccgccgccccggccgccg 46
             ||||||||||||||||||||
Sbjct: 73547 cgccgccgccccggccgccg 73528
to top
>gb|DQ184947.1| Darevskia portschinskii internal transcribed spacer 2, partial
           sequence
          Length = 696

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 423 gccgccgccccggccgccgc 404
to top
>gb|DQ184945.1| Darevskia valentini internal transcribed spacer 2, partial sequence
          Length = 680

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 417 gccgccgccccggccgccgc 398
to top
>gb|DQ184943.1| Gallotia galloti internal transcribed spacer 2, partial sequence
          Length = 550

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 325 gccgccgccccggccgccgc 306
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>emb|AL365502.57| Human DNA sequence from clone RP11-48C7 on chromosome 9q34.2-34.3
              Contains the gene for nasal embryonic luteinizing
              hormone-releasing hormone factor (DKFZP586J1624), a novel
              gene (FLJ31318), the MRPL41 gene for mitochondrial
              ribosomal protein L41 (RPML27, MRP-L270), a novel gene
              (LOC9271), the gene for melanin-concentrating hormone
              receptor 1 interacting zinc-finger protein (ZMYND17)
              (MIZIP), a novel gene (MGC40555), a novel protein and
              eleven CpG islands, complete sequence
          Length = 174995

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 24     ccgcgccgccgccccggccgccgc 47
              ||||||| ||||||||||||||||
Sbjct: 144813 ccgcgcccccgccccggccgccgc 144836
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>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     ccgcgccgccgccccggccgccgc 47
              ||||||||||||||| ||||||||
Sbjct: 142969 ccgcgccgccgcccccgccgccgc 142946
to top
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    ccgcgccgccgccccggccgccgc 47
             ||||||||||||||| ||||||||
Sbjct: 55635 ccgcgccgccgcccccgccgccgc 55612
to top
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 23     accgcgccgccgccccggccgccg 46
              ||||||||||||||| ||||||||
Sbjct: 188725 accgcgccgccgcccgggccgccg 188702
to top
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete
              sequence
          Length = 141128

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     gccgccgccccggccgccgc 47
              ||||||||||||||||||||
Sbjct: 136402 gccgccgccccggccgccgc 136421
to top
>emb|AL353786.16| Human DNA sequence from clone RP5-1175B15 on chromosome X Contains the
              gene for a protein similar to rat fertility related protein
              WMP1, the 3' end of the PTPN21 gene for protein tyrosine
              phosphatase non-receptor type 21 and CpG islands, complete
              sequence
          Length = 139565

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     gcttggcggctggggctctt 94
              ||||||||||||||||||||
Sbjct: 134582 gcttggcggctggggctctt 134563
to top
>emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, complete sequence
          Length = 115459

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    gccgccgccccggccgccgc 47
             ||||||||||||||||||||
Sbjct: 38606 gccgccgccccggccgccgc 38625
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gccgccccggccgccgcacc 50
              ||||||||||||||||||||
Sbjct: 590136 gccgccccggccgccgcacc 590117
to top
>emb|CR610831.1| full-length cDNA clone CS0DA008YK23 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1629

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 293 gccgccgccccggccgccgc 274
to top
>gb|AY646810.1| Lacerta strigata internal transcribed spacer 2, partial sequence
          Length = 683

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 416 gccgccgccccggccgccgc 397
to top
>gb|AY646809.1| Lacerta armeniaca internal transcribed spacer 2, partial sequence
          Length = 717

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 416 gccgccgccccggccgccgc 397
to top
>dbj|AB201308.1| uncultured crenarchaeote 45-H-12 genomic DNA, Fosmid clone No.45-H-12
          Length = 49265

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   tgagaggttgagggagatgg 166
             ||||||||||||||||||||
Sbjct: 34893 tgagaggttgagggagatgg 34874
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 28      gccgccgccccggccgccgc 47
               ||||||||||||||||||||
Sbjct: 1373666 gccgccgccccggccgccgc 1373685
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 28       gccgccgccccggccgccgc 47
                ||||||||||||||||||||
Sbjct: 24419991 gccgccgccccggccgccgc 24420010
to top
>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence
          Length = 222930

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    gccgccgccccggccgccgc 47
             ||||||||||||||||||||
Sbjct: 79421 gccgccgccccggccgccgc 79402
to top
>gb|AY190527.1| Pseudorabies virus strain Ea UL50 protein (UL50) gene, partial cds;
            and O-glycosylated structural protein gN (UL49.5), UL49
            tegument protein (UL49), and UL48 tegument protein (UL48)
            genes, complete cds
          Length = 2906

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   gccgccgccccggccgccgc 47
            ||||||||||||||||||||
Sbjct: 1180 gccgccgccccggccgccgc 1199
to top
>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0466H10
          Length = 176530

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 24     ccgcgccgccgccccggccgccgc 47
              |||||||||||| |||||||||||
Sbjct: 166205 ccgcgccgccgcgccggccgccgc 166228
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 33      cgccccggccgccgcaccac 52
               ||||||||||||||||||||
Sbjct: 2368275 cgccccggccgccgcaccac 2368294
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 24      ccgcgccgccgccccggccgccgc 47
               |||||||||| |||||||||||||
Sbjct: 2170285 ccgcgccgcccccccggccgccgc 2170308



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 24     ccgcgccgccgccccggccgccgc 47
              |||||||||||||| |||||||||
Sbjct: 750475 ccgcgccgccgcccgggccgccgc 750498



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 24     ccgcgccgccgccccggccgccgc 47
              ||||||| ||||||||||||||||
Sbjct: 517081 ccgcgcctccgccccggccgccgc 517104
to top
>gb|AC012665.8| Homo sapiens BAC clone RP11-19E11 from 2, complete sequence
          Length = 126039

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    ccgcgccgccgccccggccgccgc 47
             |||| |||||||||||||||||||
Sbjct: 38976 ccgccccgccgccccggccgccgc 38999
to top
>gb|J04603.1|HUMTPI1A Homo sapiens triosephosphate isomerase (TPI) gene, TPI-8B allele,
           partial cds
          Length = 645

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 479 gccgccgccccggccgccgc 460
to top
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0443E05
          Length = 176935

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     ccgcgccgccgccccggccgccgc 47
              ||||||||||||| ||||||||||
Sbjct: 138780 ccgcgccgccgccgcggccgccgc 138757
to top
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0417G05
          Length = 147803

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    ccgcgccgccgccccggccgccgc 47
             ||||||||||||| ||||||||||
Sbjct: 68689 ccgcgccgccgccgcggccgccgc 68666
to top
>gb|L12698.1|HUMEN1A01 Homo sapiens engrailed protein (EN1) gene, exon 1
          Length = 1877

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 24   ccgcgccgccgccccggccgccgc 47
            |||| |||||||||||||||||||
Sbjct: 1009 ccgccccgccgccccggccgccgc 986
to top
>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0063H21
          Length = 188058

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 24     ccgcgccgccgccccggccgccgc 47
              |||||||||||| |||||||||||
Sbjct: 167847 ccgcgccgccgcaccggccgccgc 167870
to top
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0045D08
          Length = 160541

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    ccgcgccgccgccccggccgccgc 47
             |||||||||||| |||||||||||
Sbjct: 53004 ccgcgccgccgcaccggccgccgc 53027
to top
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0023I17
          Length = 141852

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 27    cgccgccgccccggccgccgcaccaccg 54
             |||||||||| | |||||||||||||||
Sbjct: 44810 cgccgccgccgccgccgccgcaccaccg 44837
to top
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1661_C12
          Length = 122214

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 27     cgccgccgccccggccgccgcaccaccg 54
              |||||||||| | |||||||||||||||
Sbjct: 112838 cgccgccgccgccgccgccgcaccaccg 112865
to top
>gb|AE005089.1| Halobacterium sp. NRC-1 section 120 of 170 of the complete genome
          Length = 11224

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  cagcaggggcacgccgcgct 147
            ||||||||||||||||||||
Sbjct: 5786 cagcaggggcacgccgcgct 5805
to top
>dbj|AB108850.1| Chlamydomonas reinhardtii mmp3 mRNA for matrix metalloprotease,
            complete cds
          Length = 3410

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 24   ccgcgccgccgccccggccgccgc 47
            |||||||||||||||| |||||||
Sbjct: 1046 ccgcgccgccgccccgcccgccgc 1069
to top
>dbj|AK101712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060M08, full
           insert sequence
          Length = 2638

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 24  ccgcgccgccgccccggccgccgc 47
           ||||||||||||| ||||||||||
Sbjct: 536 ccgcgccgccgccgcggccgccgc 513
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>dbj|AK101610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052D01,
          full insert sequence
          Length = 1890

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                      
Query: 27 cgccgccgccccggccgccgcaccaccg 54
          |||||||||| | |||||||||||||||
Sbjct: 97 cgccgccgccgccgccgccgcaccaccg 70
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>dbj|AK069562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019O21, full
           insert sequence
          Length = 1937

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 27  cgccgccgccccggccgccgcaccaccg 54
           |||||||||| | |||||||||||||||
Sbjct: 134 cgccgccgccgccgccgccgcaccaccg 107
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>emb|AL162171.4|CNS01RHP Human chromosome 14 DNA sequence BAC R-507K2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197550

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gcttggcggctggggctctt 94
              ||||||||||||||||||||
Sbjct: 146513 gcttggcggctggggctctt 146532
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>gb|AC006443.1|AC006443 Homo sapiens chromosome 9, clone  hRPK.494_N_15, complete sequence
          Length = 210636

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     ccgcgccgccgccccggccg 43
              ||||||||||||||||||||
Sbjct: 183106 ccgcgccgccgccccggccg 183125
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>gb|BC088848.1| Rattus norvegicus similar to hypothetical protein FLJ21820, mRNA
           (cDNA clone MGC:105595 IMAGE:7314294), complete cds
          Length = 2738

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 ggagatggctgccatggttg 178
           ||||||||||||||||||||
Sbjct: 979 ggagatggctgccatggttg 998
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 25      cgcgccgccgccccggccgc 44
               ||||||||||||||||||||
Sbjct: 4742204 cgcgccgccgccccggccgc 4742185
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>ref|NM_001014075.1| Rattus norvegicus similar to hypothetical protein FLJ21820
           (RGD1311648), mRNA
          Length = 2738

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 ggagatggctgccatggttg 178
           ||||||||||||||||||||
Sbjct: 979 ggagatggctgccatggttg 998
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>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20,
             complete sequence
          Length = 116983

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    gccgccgccccggccgccgc 47
             ||||||||||||||||||||
Sbjct: 13313 gccgccgccccggccgccgc 13332
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>gb|M10036.1|HUMTPI Human triosephosphate isomerase mRNA, complete cds
          Length = 1835

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 218 gccgccgccccggccgccgc 199
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>emb|X69723.1|HSTPI1G H.sapiens TPI1 gene for triosephosphate isomerase
          Length = 5005

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 479 gccgccgccccggccgccgc 460
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>gb|M57946.1|CHPTPI P.troglodytes triose-phosphate isomerase (TPI) gene, complete cds
          Length = 4957

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  gccgccgccccggccgccgc 47
           ||||||||||||||||||||
Sbjct: 479 gccgccgccccggccgccgc 460
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>emb|AL591762.13| Mouse DNA sequence from clone RP23-465I6 on chromosome 2, complete
             sequence
          Length = 137773

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ccgcgccgccgccccggccg 43
             ||||||||||||||||||||
Sbjct: 40694 ccgcgccgccgccccggccg 40675


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,770,003
Number of Sequences: 3902068
Number of extensions: 1770003
Number of successful extensions: 50973
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48558
Number of HSP's gapped (non-prelim): 2415
length of query: 232
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 210
effective length of database: 17,147,199,772
effective search space: 3600911952120
effective search space used: 3600911952120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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