ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl44d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SH2P1_XENLA (Q4QR29) SH2 domain-binding protein 1 29 3.0

>SH2P1_XENLA (Q4QR29) SH2 domain-binding protein 1|
          Length = 1157

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 137  VTP*EAARARGGSVRVEMGKGMEEEDLEGGRKQRRKTENAP 15
            + P +  R +GGS   E G+G +E   EGG K+++K    P
Sbjct: 929  LAPRKKKRKKGGSSSGEQGEGGDEG--EGGEKKKKKRRKRP 967


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,139,045
Number of Sequences: 219361
Number of extensions: 182154
Number of successful extensions: 521
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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