Clone Name | bastl44c03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HS101_ORYSA (Q6F2Y7) Heat shock protein 101 | 38 | 0.008 | 2 | HS101_ARATH (P42730) Heat shock protein 101 | 32 | 0.42 | 3 | FUS_SV5 (P04849) Fusion glycoprotein F0 precursor [Contains: Fus... | 29 | 3.6 | 4 | TRPA1_CAEEL (Q18297) Transient receptor potential cation channel... | 28 | 4.7 | 5 | E2F2_HUMAN (Q14209) Transcription factor E2F2 (E2F-2) | 28 | 6.1 |
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>HS101_ORYSA (Q6F2Y7) Heat shock protein 101| Length = 912 Score = 37.7 bits (86), Expect = 0.008 Identities = 19/53 (35%), Positives = 21/53 (39%) Frame = +1 Query: 115 MNPDKFTHKTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRSGILRQAIAHA 273 MNPD FTHKTN D+ GILRQAI+ A Sbjct: 1 MNPDNFTHKTNEALVAAHEIASEAGHAQLTPLHLVAALAADKGGILRQAISQA 53
>HS101_ARATH (P42730) Heat shock protein 101| Length = 911 Score = 32.0 bits (71), Expect = 0.42 Identities = 17/53 (32%), Positives = 20/53 (37%) Frame = +1 Query: 115 MNPDKFTHKTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRSGILRQAIAHA 273 MNP+KFTHKTN D +GI QAI+ A Sbjct: 1 MNPEKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSA 53
>FUS_SV5 (P04849) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 529 Score = 28.9 bits (63), Expect = 3.6 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -1 Query: 128 LSGFMVSASASYGLTATKLAMVIGRDLWVRRFALVSFSRRK 6 +SG +++ +SY T TKL IG +L R L+ RR+ Sbjct: 61 ISGCNITSISSYNATVTKLLQPIGENLETIRNQLIPTRRRR 101
>TRPA1_CAEEL (Q18297) Transient receptor potential cation channel subfamily A| member 1 homolog Length = 1193 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -2 Query: 97 ATD*LRQNWQW*LGGICGF 41 AT +RQNWQW L +C F Sbjct: 907 ATSGVRQNWQWILAALCIF 925
>E2F2_HUMAN (Q14209) Transcription factor E2F2 (E2F-2)| Length = 437 Score = 28.1 bits (61), Expect = 6.1 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 Query: 26 PRRIFEPTNPSQSPLPVLSQLIRSSQKRKP 115 P + EP +PS+ PLP S L S +P Sbjct: 304 PEEVQEPDSPSEEPLPSTSTLCPSPDSAQP 333 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,491,233 Number of Sequences: 219361 Number of extensions: 428734 Number of successful extensions: 1455 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1454 length of database: 80,573,946 effective HSP length: 67 effective length of database: 65,876,759 effective search space used: 1581042216 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)