ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl44c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
2dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
3gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
4ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA 115 1e-22
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
6dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
7dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
8dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
9dbj|AK059244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
10ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) tr... 78 3e-11
11ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91)... 78 3e-11
12gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, co... 78 3e-11
13gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19... 78 3e-11
14gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, co... 78 3e-11
15gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18... 78 3e-11
16ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 tran... 74 5e-10
17ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 tran... 74 5e-10
18gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence 74 5e-10
19gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein ... 74 5e-10
20emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein 70 7e-09
21ref|XM_806602.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.7
22gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 42 1.7
23gb|AC127340.4| Mus musculus BAC clone RP23-188M2 from chromosome... 40 6.7
24gb|AC130545.4| Mus musculus chromosome 18 clone RP24-297E18, com... 40 6.7
25emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; s... 40 6.7
26emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; s... 40 6.7
27gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.7
28gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 6.7
29gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.7
30emb|AJ557002.1|DIN557002 Davidia involucrata partial rpb2 gene f... 40 6.7
31emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on ch... 40 6.7
32dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.7
33dbj|AP001429.2| Homo sapiens genomic DNA, chromosome 21q22.2, cl... 40 6.7
34dbj|AP000150.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 40 6.7
35dbj|AP000009.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 40 6.7
36dbj|D83253.1| Homo sapiens genomic DNA, chromosome 21q22.2, p1 c... 40 6.7

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  135 bits (68), Expect = 2e-28
 Identities = 174/208 (83%), Gaps = 1/208 (0%)
 Strand = Plus / Plus

                                                                           
Query: 259     gatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggca 318
               |||||||||||| ||||| ||  | ||||| |||||| |||| || |  ||||| |||||
Sbjct: 4820085 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 4820144

                                                                           
Query: 319     acgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctg 378
                || |||||||||||||| ||||| ||||| || || ||||||||||| ||| |||||||
Sbjct: 4820145 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 4820204

                                                                           
Query: 379     ctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaaccc 438
               ||| |||||||||||||||||||||||||| || || || ||   |||||||||||||||
Sbjct: 4820205 cttcggcgacaagcagcgcttcatcggcaccgcgggggccgcgtcctccaccatgaaccc 4820264

                                           
Query: 439     ca-caactccatctcacagatcaagcgc 465
                |  |||||| |||| ||||||||||||
Sbjct: 4820265 taggaactccgtctcccagatcaagcgc 4820292



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>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full
           insert sequence
          Length = 3137

 Score =  135 bits (68), Expect = 2e-28
 Identities = 174/208 (83%), Gaps = 1/208 (0%)
 Strand = Plus / Plus

                                                                       
Query: 259 gatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggca 318
           |||||||||||| ||||| ||  | ||||| |||||| |||| || |  ||||| |||||
Sbjct: 183 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 242

                                                                       
Query: 319 acgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctg 378
            || |||||||||||||| ||||| ||||| || || ||||||||||| ||| |||||||
Sbjct: 243 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 302

                                                                       
Query: 379 ctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaaccc 438
           ||| |||||||||||||||||||||||||| || || || ||   |||||||||||||||
Sbjct: 303 cttcggcgacaagcagcgcttcatcggcaccgcgggggccgcgtcctccaccatgaaccc 362

                                       
Query: 439 ca-caactccatctcacagatcaagcgc 465
            |  |||||| |||| ||||||||||||
Sbjct: 363 taggaactccgtctcccagatcaagcgc 390



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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score =  135 bits (68), Expect = 2e-28
 Identities = 174/208 (83%), Gaps = 1/208 (0%)
 Strand = Plus / Plus

                                                                         
Query: 259   gatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggca 318
             |||||||||||| ||||| ||  | ||||| |||||| |||| || |  ||||| |||||
Sbjct: 92493 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 92552

                                                                         
Query: 319   acgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctg 378
              || |||||||||||||| ||||| ||||| || || ||||||||||| ||| |||||||
Sbjct: 92553 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 92612

                                                                         
Query: 379   ctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaaccc 438
             ||| |||||||||||||||||||||||||| || || || ||   |||||||||||||||
Sbjct: 92613 cttcggcgacaagcagcgcttcatcggcaccgcgggggccgcgtcctccaccatgaaccc 92672

                                         
Query: 439   ca-caactccatctcacagatcaagcgc 465
              |  |||||| |||| ||||||||||||
Sbjct: 92673 taggaactccgtctcccagatcaagcgc 92700



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>ref|NM_189556.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3139

 Score =  115 bits (58), Expect = 1e-22
 Identities = 151/182 (82%)
 Strand = Plus / Plus

                                                                       
Query: 257 aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 316
           |||||||||||||| || |||||| |||| || ||||||||||||||||  || || |||
Sbjct: 212 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 271

                                                                       
Query: 317 caacgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtc 376
           || || ||||| || ||||| ||||| ||||| || || |||||||| || || || |||
Sbjct: 272 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 331

                                                                       
Query: 377 tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 436
           ||||| |||||||||||||| |||||||| || || ||||||||   |||||| ||||||
Sbjct: 332 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 391

             
Query: 437 cc 438
           ||
Sbjct: 392 cc 393



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  115 bits (58), Expect = 1e-22
 Identities = 151/182 (82%)
 Strand = Plus / Plus

                                                                           
Query: 257     aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 316
               |||||||||||||| || |||||| |||| || ||||||||||||||||  || || |||
Sbjct: 4253481 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 4253540

                                                                           
Query: 317     caacgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtc 376
               || || ||||| || ||||| ||||| ||||| || || |||||||| || || || |||
Sbjct: 4253541 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 4253600

                                                                           
Query: 377     tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 436
               ||||| |||||||||||||| |||||||| || || ||||||||   |||||| ||||||
Sbjct: 4253601 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 4253660

                 
Query: 437     cc 438
               ||
Sbjct: 4253661 cc 4253662



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>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score =  115 bits (58), Expect = 1e-22
 Identities = 151/182 (82%)
 Strand = Plus / Plus

                                                                         
Query: 257   aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 316
             |||||||||||||| || |||||| |||| || ||||||||||||||||  || || |||
Sbjct: 91448 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 91507

                                                                         
Query: 317   caacgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtc 376
             || || ||||| || ||||| ||||| ||||| || || |||||||| || || || |||
Sbjct: 91508 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 91567

                                                                         
Query: 377   tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 436
             ||||| |||||||||||||| |||||||| || || ||||||||   |||||| ||||||
Sbjct: 91568 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 91627

               
Query: 437   cc 438
             ||
Sbjct: 91628 cc 91629



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>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0666G04
          Length = 141983

 Score =  115 bits (58), Expect = 1e-22
 Identities = 151/182 (82%)
 Strand = Plus / Plus

                                                                         
Query: 257   aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 316
             |||||||||||||| || |||||| |||| || ||||||||||||||||  || || |||
Sbjct: 33251 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 33310

                                                                         
Query: 317   caacgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtc 376
             || || ||||| || ||||| ||||| ||||| || || |||||||| || || || |||
Sbjct: 33311 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 33370

                                                                         
Query: 377   tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 436
             ||||| |||||||||||||| |||||||| || || ||||||||   |||||| ||||||
Sbjct: 33371 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 33430

               
Query: 437   cc 438
             ||
Sbjct: 33431 cc 33432



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>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full
           insert sequence
          Length = 3139

 Score =  115 bits (58), Expect = 1e-22
 Identities = 151/182 (82%)
 Strand = Plus / Plus

                                                                       
Query: 257 aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 316
           |||||||||||||| || |||||| |||| || ||||||||||||||||  || || |||
Sbjct: 212 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 271

                                                                       
Query: 317 caacgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtc 376
           || || ||||| || ||||| ||||| ||||| || || |||||||| || || || |||
Sbjct: 272 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 331

                                                                       
Query: 377 tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 436
           ||||| |||||||||||||| |||||||| || || ||||||||   |||||| ||||||
Sbjct: 332 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 391

             
Query: 437 cc 438
           ||
Sbjct: 392 cc 393



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>dbj|AK059244.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G02, full
           insert sequence
          Length = 1164

 Score =  115 bits (58), Expect = 1e-22
 Identities = 151/182 (82%)
 Strand = Plus / Plus

                                                                       
Query: 257 aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 316
           |||||||||||||| || |||||| |||| || ||||||||||||||||  || || |||
Sbjct: 158 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 217

                                                                       
Query: 317 caacgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtc 376
           || || ||||| || ||||| ||||| ||||| || || |||||||| || || || |||
Sbjct: 218 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 277

                                                                       
Query: 377 tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 436
           ||||| |||||||||||||| |||||||| || || ||||||||   |||||| ||||||
Sbjct: 278 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 337

             
Query: 437 cc 438
           ||
Sbjct: 338 cc 339



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>ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant
           AT1G79930.1 mRNA, complete cds
          Length = 2949

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 326 atcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgctttggc 385
           |||||||| || || ||||| || ||||| || ||||| ||||| || |||||||| || 
Sbjct: 217 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 276

                                              
Query: 386 gacaagcagcgcttcatcggcactgcaggcgctgc 420
           |||||||||||||||||||||||||| || |||||
Sbjct: 277 gacaagcagcgcttcatcggcactgctggagctgc 311



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>ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant
           AT1G79930.2 mRNA, complete cds
          Length = 3012

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 326 atcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgctttggc 385
           |||||||| || || ||||| || ||||| || ||||| ||||| || |||||||| || 
Sbjct: 261 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 320

                                              
Query: 386 gacaagcagcgcttcatcggcactgcaggcgctgc 420
           |||||||||||||||||||||||||| || |||||
Sbjct: 321 gacaagcagcgcttcatcggcactgctggagctgc 355



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>gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, complete cds
          Length = 2798

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 326 atcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgctttggc 385
           |||||||| || || ||||| || ||||| || ||||| ||||| || |||||||| || 
Sbjct: 217 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 276

                                              
Query: 386 gacaagcagcgcttcatcggcactgcaggcgctgc 420
           |||||||||||||||||||||||||| || |||||
Sbjct: 277 gacaagcagcgcttcatcggcactgctggagctgc 311



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>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete
             sequence
          Length = 111301

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 326   atcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgctttggc 385
             |||||||| || || ||||| || ||||| || ||||| ||||| || |||||||| || 
Sbjct: 37179 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 37238

                                                
Query: 386   gacaagcagcgcttcatcggcactgcaggcgctgc 420
             |||||||||||||||||||||||||| || |||||
Sbjct: 37239 gacaagcagcgcttcatcggcactgctggagctgc 37273



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 167/209 (79%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                         
Query: 260   atgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggcaa 319
             ||||| || ||||| |||||||| || |||||||  ||| |||| |  || ||| |||||
Sbjct: 41956 atgagtgtagttggttttgattttggaaacgagaattgccttgttgctgttgcaaggcaa 42015

                                                                         
Query: 320   cgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgc 379
              | || |||||||| || || ||||| || || || || ||||| || || ||||| |||
Sbjct: 42016 agaggtatcgacgtcgtgcttaatgatgagtcaaatcgcgagactccggctatcgtttgc 42075

                                                                         
Query: 380   tttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaacccc 439
             ||||| |||||||||||||||||||| ||||| || |||||     |||  |||||||||
Sbjct: 42076 tttggtgacaagcagcgcttcatcggtactgctggagctgcttctaccatgatgaacccc 42135

                                          
Query: 440   -acaactccatctcacagatcaagcgctt 467
              | |||||||||||||| |||||||||||
Sbjct: 42136 aaaaactccatctcacaaatcaagcgctt 42164



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>gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, complete cds
          Length = 2496

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 326 atcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgctttggc 385
           |||||||| || || ||||| || ||||| || ||||| ||||| || |||||||| || 
Sbjct: 67  atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 126

                                              
Query: 386 gacaagcagcgcttcatcggcactgcaggcgctgc 420
           |||||||||||||||||||||||||| || |||||
Sbjct: 127 gacaagcagcgcttcatcggcactgctggagctgc 161



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>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence,
            complete sequence
          Length = 116905

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                        
Query: 326  atcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgctttggc 385
            |||||||| || || ||||| || ||||| || ||||| ||||| || |||||||| || 
Sbjct: 3765 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 3706

                                               
Query: 386  gacaagcagcgcttcatcggcactgcaggcgctgc 420
            |||||||||||||||||||||||||| || |||||
Sbjct: 3705 gacaagcagcgcttcatcggcactgctggagctgc 3671



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>ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 transcript variant
           AT1G79920.1 mRNA, complete cds
          Length = 2941

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 167/209 (79%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 260 atgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggcaa 319
           ||||| || ||||| |||||||| || |||||||  ||| |||| |  || ||| |||||
Sbjct: 144 atgagtgtagttggttttgattttggaaacgagaattgccttgttgctgttgcaaggcaa 203

                                                                       
Query: 320 cgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgc 379
            | || |||||||| || || ||||| || || || || ||||| || || ||||| |||
Sbjct: 204 agaggtatcgacgtcgtgcttaatgatgagtcaaatcgcgagactccggctatcgtttgc 263

                                                                       
Query: 380 tttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaacccc 439
           ||||| |||||||||||||||||||| ||||| || |||||     |||  |||||||||
Sbjct: 264 tttggtgacaagcagcgcttcatcggtactgctggagctgcttctaccatgatgaacccc 323

                                        
Query: 440 -acaactccatctcacagatcaagcgctt 467
            | |||||||||||||| |||||||||||
Sbjct: 324 aaaaactccatctcacaaatcaagcgctt 352



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>ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 transcript variant
           AT1G79920.2 mRNA, complete cds
          Length = 2941

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 167/209 (79%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 260 atgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggcaa 319
           ||||| || ||||| |||||||| || |||||||  ||| |||| |  || ||| |||||
Sbjct: 144 atgagtgtagttggttttgattttggaaacgagaattgccttgttgctgttgcaaggcaa 203

                                                                       
Query: 320 cgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgc 379
            | || |||||||| || || ||||| || || || || ||||| || || ||||| |||
Sbjct: 204 agaggtatcgacgtcgtgcttaatgatgagtcaaatcgcgagactccggctatcgtttgc 263

                                                                       
Query: 380 tttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaacccc 439
           ||||| |||||||||||||||||||| ||||| || |||||     |||  |||||||||
Sbjct: 264 tttggtgacaagcagcgcttcatcggtactgctggagctgcttctaccatgatgaacccc 323

                                        
Query: 440 -acaactccatctcacagatcaagcgctt 467
            | |||||||||||||| |||||||||||
Sbjct: 324 aaaaactccatctcacaaatcaagcgctt 352



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>gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence
          Length = 2952

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 167/209 (79%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 260 atgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggcaa 319
           ||||| || ||||| |||||||| || |||||||  ||| |||| |  || ||| |||||
Sbjct: 137 atgagtgtagttggttttgattttggaaacgagaattgccttgttgctgttgcaaggcaa 196

                                                                       
Query: 320 cgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgc 379
            | || |||||||| || || ||||| || || || || ||||| || || ||||| |||
Sbjct: 197 agaggtatcgacgtcgtgcttaatgatgagtcaaatcgcgagactccggctatcgtttgc 256

                                                                       
Query: 380 tttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaacccc 439
           ||||| |||||||||||||||||||| ||||| || |||||     |||  |||||||||
Sbjct: 257 tttggtgacaagcagcgcttcatcggtactgctggagctgcttctaccatgatgaacccc 316

                                        
Query: 440 -acaactccatctcacagatcaagcgctt 467
            | |||||||||||||| |||||||||||
Sbjct: 317 aaaaactccatctcacaaatcaagcgctt 345



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>gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein (At1g79920;
           F19K16.12) mRNA, complete cds
          Length = 2850

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 167/209 (79%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 260 atgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggcaa 319
           ||||| || ||||| |||||||| || |||||||  ||| |||| |  || ||| |||||
Sbjct: 144 atgagtgtagttggttttgattttggaaacgagaattgccttgttgctgttgcaaggcaa 203

                                                                       
Query: 320 cgtggcatcgacgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgc 379
            | || |||||||| || || ||||| || || || || ||||| || || ||||| |||
Sbjct: 204 agaggtatcgacgtcgtgcttaatgatgagtcaaatcgcgagactccggctatcgtttgc 263

                                                                       
Query: 380 tttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaacccc 439
           ||||| |||||||||||||||||||| ||||| || |||||     |||  |||||||||
Sbjct: 264 tttggtgacaagcagcgcttcatcggtactgctggagctgcttctaccatgatgaacccc 323

                                        
Query: 440 -acaactccatctcacagatcaagcgctt 467
            | |||||||||||||| |||||||||||
Sbjct: 324 aaaaactccatctcacaaatcaagcgctt 352



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>emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein
          Length = 2923

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 122/151 (80%)
 Strand = Plus / Plus

                                                                       
Query: 270 ttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggcaacgtggcatcg 329
           ||||||||||||| || |||||||  ||| |||| |  || ||| ||||| | || ||||
Sbjct: 164 ttgggtttgatttcggaaacgagaattgccttgttgccgttgcaaggcaaagaggtatcg 223

                                                                       
Query: 330 acgtggttctcaatgaggaatccaaacgggagacccctgccatcgtctgctttggcgaca 389
           |||| || || ||||| || ||||| || ||||| ||||| || |||||||| || ||||
Sbjct: 224 acgtcgtgcttaatgatgagtccaatcgtgagacgcctgctattgtctgcttcggtgaca 283

                                          
Query: 390 agcagcgcttcatcggcactgcaggcgctgc 420
           |  ||||||||||||||||||| || |||||
Sbjct: 284 acgagcgcttcatcggcactgctggagctgc 314



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>ref|XM_806602.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508613.20) partial mRNA
          Length = 2214

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 21   caaaggaagaagaagacccgc 41
            |||||||||||||||||||||
Sbjct: 1582 caaaggaagaagaagacccgc 1562



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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 426    ccaccatgaaccccacaactc 446
              |||||||||||||||||||||
Sbjct: 358091 ccaccatgaaccccacaactc 358111



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>gb|AC127340.4| Mus musculus BAC clone RP23-188M2 from chromosome 18, complete sequence
          Length = 210649

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     gaacattcaggagccctctcaaag 25
             ||||||||||||||| ||||||||
Sbjct: 57781 gaacattcaggagccttctcaaag 57804



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>gb|AC130545.4| Mus musculus chromosome 18 clone RP24-297E18, complete sequence
          Length = 156144

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     gaacattcaggagccctctcaaag 25
             ||||||||||||||| ||||||||
Sbjct: 11033 gaacattcaggagccttctcaaag 11056



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>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2
          Length = 178073

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     gcggccacaccggcaccacc 59
              ||||||||||||||||||||
Sbjct: 122069 gcggccacaccggcaccacc 122088



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>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    gcggccacaccggcaccacc 59
             ||||||||||||||||||||
Sbjct: 56005 gcggccacaccggcaccacc 55986



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>gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 328 of
             460 of the complete genome
          Length = 13708

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    ccgcggccacaccggcaccaccac 61
             ||||||| ||||||||||||||||
Sbjct: 11849 ccgcggcaacaccggcaccaccac 11872



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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 455    agatcaagcgcttgctgggc 474
              ||||||||||||||||||||
Sbjct: 440572 agatcaagcgcttgctgggc 440553



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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 38      ccgcggccacaccggcaccaccac 61
               ||||||| ||||||||||||||||
Sbjct: 1325183 ccgcggcaacaccggcaccaccac 1325160



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>emb|AJ557002.1|DIN557002 Davidia involucrata partial rpb2 gene for RNA polymerase II second
           largest subunit, exons 11-22
          Length = 2613

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 cgtggcatcgacgtggttct 339
           ||||||||||||||||||||
Sbjct: 578 cgtggcatcgacgtggttct 597



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>emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on chromosome 2, complete
              sequence
          Length = 219412

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    gctgccaactccaccatgaa 435
              ||||||||||||||||||||
Sbjct: 206310 gctgccaactccaccatgaa 206291



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>dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, section 72/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ccctctcaaaggaagaagaa 34
             ||||||||||||||||||||
Sbjct: 10622 ccctctcaaaggaagaagaa 10603



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>dbj|AP001429.2| Homo sapiens genomic DNA, chromosome 21q22.2, clone:T1212, LB7T-ERG
             region, complete sequences
          Length = 85691

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ccctctcaaaggaagaagaa 34
             ||||||||||||||||||||
Sbjct: 62077 ccctctcaaaggaagaagaa 62058



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>dbj|AP000150.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 2/16, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ccctctcaaaggaagaagaa 34
             ||||||||||||||||||||
Sbjct: 80039 ccctctcaaaggaagaagaa 80020



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>dbj|AP000009.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 2/13
          Length = 152345

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ccctctcaaaggaagaagaa 34
             ||||||||||||||||||||
Sbjct: 80039 ccctctcaaaggaagaagaa 80020



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>dbj|D83253.1| Homo sapiens genomic DNA, chromosome 21q22.2, p1 clone: T1212 and
             T1601, complete sequence
          Length = 110174

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ccctctcaaaggaagaagaa 34
             ||||||||||||||||||||
Sbjct: 62073 ccctctcaaaggaagaagaa 62054


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,495,055
Number of Sequences: 3902068
Number of extensions: 4495055
Number of successful extensions: 67890
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67596
Number of HSP's gapped (non-prelim): 287
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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