Clone Name | bastl44b11 |
---|---|
Clone Library Name | barley_pub |
>SP7_MOUSE (Q8VI67) Transcription factor Sp7 (Zinc finger protein osterix)| (C22) Length = 428 Score = 28.9 bits (63), Expect = 3.6 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -2 Query: 76 GSGGFWSRGAGSGAGLTACDC 14 GSGG+ AGSGAG + CDC Sbjct: 253 GSGGY----AGSGAGRSTCDC 269
>SOX7_MOUSE (P40646) Transcription factor SOX-7 (mSOX7)| Length = 380 Score = 27.7 bits (60), Expect = 8.1 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -1 Query: 233 PHSLPHLPAPSFTSPYT 183 PH LPHLP P ++ +T Sbjct: 223 PHHLPHLPGPPYSPEFT 239
>KRA51_HUMAN (Q6L8H4) Keratin-associated protein 5-1 (Keratin-associated protein| 5.1) (Ultrahigh sulfur keratin-associated protein 5.1) Length = 278 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -2 Query: 88 GDSRGSGGFWSRGAGSGAGLTACDCS 11 G S+G G G GSG G+ C CS Sbjct: 191 GGSKGGCGSGCGGCGSGCGVPVCCCS 216
>SP7_HUMAN (Q8TDD2) Transcription factor Sp7 (Zinc finger protein osterix)| Length = 431 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -2 Query: 76 GSGGFWSRGAGSGAGLTACDC 14 GSGG+ GSGAG ++CDC Sbjct: 256 GSGGY----GGSGAGRSSCDC 272
>RALY_MOUSE (Q64012) RNA-binding protein Raly (hnRNP associated with lethal| yellow protein) (Maternally expressed hnRNP C-related protein) Length = 312 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -2 Query: 88 GDSRGSGGFWSRGAGSGAGLTACDCSPR 5 G S G GG + G GSG G +C S R Sbjct: 233 GGSSGGGGSSNVGGGSGGGSGSCSSSSR 260
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 27.7 bits (60), Expect = 8.1 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -2 Query: 88 GDSRGSGGFWSRGAGSGAG 32 GD RG GG+ S G G G G Sbjct: 114 GDRRGGGGYGSGGGGRGGG 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,965,289 Number of Sequences: 219361 Number of extensions: 297526 Number of successful extensions: 3223 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1559 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3188 length of database: 80,573,946 effective HSP length: 60 effective length of database: 67,412,286 effective search space used: 1617894864 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)