Clone Name | bastl44b09 |
---|---|
Clone Library Name | barley_pub |
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 33.1 bits (74), Expect = 0.19 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = +1 Query: 208 MLPRKREIVAGEVED 252 MLPRKREIVAGEVED Sbjct: 1 MLPRKREIVAGEVED 15
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 33.1 bits (74), Expect = 0.19 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = +1 Query: 208 MLPRKREIVAGEVED 252 MLPRKREIVAGEVED Sbjct: 1 MLPRKREIVAGEVED 15
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 28.1 bits (61), Expect = 6.2 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -2 Query: 74 VASGKEAGEGRSV*GFWDGTGGPD 3 V +GK G+G++V GF DGT D Sbjct: 1361 VVNGKGKGKGKAVAGFQDGTASDD 1384
>SURE_HALSA (Q9HQB2) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 258 Score = 27.7 bits (60), Expect = 8.2 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +1 Query: 49 SPASFPDATGESKVSRRSHALDLT 120 +P DATGE V+R SHA D+T Sbjct: 172 APHPDADATGEMVVTRPSHAYDMT 195
>PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 27.7 bits (60), Expect = 8.2 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 9/40 (22%) Frame = +1 Query: 10 PPVPSQKP*TDRPSPASFPDAT---------GESKVSRRS 102 PP PSQ P R +PA+ P T G + SRRS Sbjct: 280 PPRPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRRS 319
>PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 27.7 bits (60), Expect = 8.2 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 9/40 (22%) Frame = +1 Query: 10 PPVPSQKP*TDRPSPASFPDAT---------GESKVSRRS 102 PP PSQ P R +PA+ P T G + SRRS Sbjct: 280 PPRPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRRS 319
>RS5_RHOS4 (Q3J5Q5) 30S ribosomal protein S5| Length = 187 Score = 27.7 bits (60), Expect = 8.2 Identities = 17/57 (29%), Positives = 24/57 (42%) Frame = -1 Query: 201 RDAAEEPEDGRRRSEEQAVVDGRRELPRQIQRVRPPRNLGFACRVGEGSRRGTVRLG 31 R+ + D R R E D + R + V+ + GFA V G +RG V G Sbjct: 4 RENRRDRRDDRSREETPEFADRLVAINRVSKTVKGGKRFGFAALVVVGDQRGRVGFG 60 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,903,970 Number of Sequences: 219361 Number of extensions: 459627 Number of successful extensions: 1932 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1825 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1931 length of database: 80,573,946 effective HSP length: 59 effective length of database: 67,631,647 effective search space used: 1623159528 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)