ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl44b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb044... 48 0.005
2gb|AC157487.1| Genomic sequence for Zea mays clone ZMMBBb0614J24... 48 0.005
3emb|AL626767.15| Mouse DNA sequence from clone RP23-421C7 on chr... 44 0.084
4gb|AC018665.9| Homo sapiens chromosome 17, clone RP11-449J21, co... 42 0.33
5gb|AC040980.14| Homo sapiens chromosome 17, clone RP11-685I11, c... 42 0.33
6gb|U72848.1|HSAPEVPL6 Homo sapiens envoplakin (EVPL) gene, exons... 42 0.33
7gb|AC119235.13| Mus musculus chromosome 1, clone RP24-212E3, com... 40 1.3
8gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome... 40 1.3
9emb|BX640401.2| Chicken DNA sequence from clone WAG-106I4, compl... 40 1.3
10gb|AC136986.6| Mus musculus chromosome 12, clone RP23-187H12, co... 40 1.3
11gb|AC063949.21| Homo sapiens 12 BAC RP11-693J15 (Roswell Park Ca... 40 1.3
12dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 40 1.3
13dbj|AP003503.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 1.3
14emb|CT010449.10| Mouse DNA sequence from clone RP23-347O24 on ch... 40 1.3
15emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on ch... 40 1.3
16ref|NM_193290.1| Oryza sativa (japonica cultivar-group), predic... 38 5.2
17gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, comp... 38 5.2
18gb|AF268473.1| Mus musculus microfibril-associated glycoprotein ... 38 5.2
19gb|AC135512.6| Oryza sativa (japonica cultivar-group) chromosome... 38 5.2
20gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome... 38 5.2
21ref|XM_423931.1| PREDICTED: Gallus gallus similar to aldose 1-ep... 38 5.2
22gb|AC147563.4| Mus musculus BAC clone RP23-231H21 from chromosom... 38 5.2
23gb|AC147017.4| Pan troglodytes BAC clone RP43-77F5 from 7, compl... 38 5.2
24gb|AC122810.4| Mus musculus BAC clone RP23-276H4 from chromosome... 38 5.2
25gb|AC098739.3| Mus musculus BAC clone RP23-122G2 from 6, complet... 38 5.2
26emb|Z93096.1|HS390B3 Human DNA sequence from clone CTA-390B3 on ... 38 5.2
27gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 38 5.2
28emb|AL109824.24|HSJ1181N3 Human DNA sequence from clone RP5-1181... 38 5.2
29gb|AC023165.20| Homo sapiens 3 BAC RP11-202D20 (Roswell Park Can... 38 5.2
30emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chro... 38 5.2
31emb|X03365.1|BTBPTIG Bovine pancreatic trypsin inhibitor (BPTI) ... 38 5.2
32emb|AJ853839.1| Hordeum vulgare partial mRNA for putative WRKY3 ... 38 5.2
33gb|AC158997.2| Mus musculus BAC clone RP24-176F12 from chromosom... 38 5.2
34emb|CR749364.1| Homo sapiens mRNA; cDNA DKFZp686I10125 (from clo... 38 5.2
35gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 38 5.2
36dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 38 5.2
37gb|AC024580.6| Homo sapiens chromosome 19 clone CTD-2621I17, com... 38 5.2
38emb|CR524180.1| Gallus gallus finished cDNA, clone ChEST772l18 38 5.2
39emb|BX942826.8| Mouse DNA sequence from clone RP23-34P2 on chrom... 38 5.2
40gb|AC024951.31| Homo sapiens chromosome 8 clone RP11-104C10, com... 38 5.2
41emb|BX932084.2| Gallus gallus finished cDNA, clone ChEST158m7 38 5.2
42dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.2
43dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.2
44gb|AC133183.3| Mus musculus BAC clone RP24-185O19 from chromosom... 38 5.2
45dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic D... 38 5.2
46emb|BX935155.1| Gallus gallus finished cDNA, clone ChEST862a17 38 5.2
47dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.2
48emb|BX932733.1| Gallus gallus finished cDNA, clone ChEST493i20 38 5.2
49gb|AC104417.14| Homo sapiens chromosome 8, clone RP11-953B20, co... 38 5.2
50gb|AC121863.3| Mus musculus chromosome UNK clone RP24-110O17, co... 38 5.2
51emb|BX842238.2| Mouse DNA sequence from clone RP24-159M2 on chro... 38 5.2
52gb|AC153505.6| Mus musculus 10 BAC RP23-336I13 (Roswell Park Can... 38 5.2
53dbj|AK066957.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.2
54gb|AC108832.10| Mus musculus chromosome 7, clone RP23-242J3, com... 38 5.2
55dbj|AP000827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 5.2
56gb|AC153696.3| Mus musculus 6 BAC RP24-562H2 (Roswell Park Cance... 38 5.2
57dbj|AP000648.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 38 5.2
58gb|AC166781.7| Mus musculus chromosome 8, clone RP24-158M8, comp... 38 5.2
59dbj|AK114180.1| Ciona intestinalis cDNA, clone:cicl043o11, full ... 38 5.2
60gb|AC109203.9| Mus musculus chromosome 18, clone RP23-2B18, comp... 38 5.2
61emb|AL832211.1|HSM803518 Homo sapiens mRNA; cDNA DKFZp686N112 (f... 38 5.2
62gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 5.2
63gb|AC140672.5| Mus musculus BAC clone RP24-208P4 from chromosome... 38 5.2
64emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on ch... 38 5.2
65emb|AL645625.15| Mouse DNA sequence from clone RP23-183L1 on chr... 38 5.2 
>gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete
             sequence
          Length = 132549

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 43    cccccgcttcccctctccctctgc 66
             ||||||||||||||||||||||||
Sbjct: 32562 cccccgcttcccctctccctctgc 32585
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>gb|AC157487.1| Genomic sequence for Zea mays clone ZMMBBb0614J24, from chromosome 8,
              complete sequence
          Length = 136932

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 43     cccccgcttcccctctccctctgc 66
              ||||||||||||||||||||||||
Sbjct: 120883 cccccgcttcccctctccctctgc 120906
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>emb|AL626767.15| Mouse DNA sequence from clone RP23-421C7 on chromosome 4, complete
             sequence
          Length = 199694

 Score = 44.1 bits (22), Expect = 0.084
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 88    ggaggatggaggaggggagcag 109
             ||||||||||||||||||||||
Sbjct: 41095 ggaggatggaggaggggagcag 41116
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>gb|AC018665.9| Homo sapiens chromosome 17, clone RP11-449J21, complete sequence
          Length = 184393

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 49     cttcccctctccctctgcctt 69
              |||||||||||||||||||||
Sbjct: 175762 cttcccctctccctctgcctt 175782
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>gb|AC040980.14| Homo sapiens chromosome 17, clone RP11-685I11, complete sequence
          Length = 139484

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 49    cttcccctctccctctgcctt 69
             |||||||||||||||||||||
Sbjct: 61821 cttcccctctccctctgcctt 61841
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>gb|U72848.1|HSAPEVPL6 Homo sapiens envoplakin (EVPL) gene, exons 19 through 21
          Length = 1068

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  cttcccctctccctctgcctt 69
           |||||||||||||||||||||
Sbjct: 783 cttcccctctccctctgcctt 803
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>gb|AC119235.13| Mus musculus chromosome 1, clone RP24-212E3, complete sequence
          Length = 181695

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    cttcccctctccctctgcct 68
             ||||||||||||||||||||
Sbjct: 99353 cttcccctctccctctgcct 99372
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>gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome 3, complete sequence
          Length = 186277

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     ggaggatggaggaggggagc 107
              ||||||||||||||||||||
Sbjct: 139382 ggaggatggaggaggggagc 139401
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>emb|BX640401.2| Chicken DNA sequence from clone WAG-106I4, complete sequence
          Length = 104753

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    aggatggaggaggggagcag 109
             ||||||||||||||||||||
Sbjct: 61319 aggatggaggaggggagcag 61338
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>gb|AC136986.6| Mus musculus chromosome 12, clone RP23-187H12, complete sequence
          Length = 206332

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     cttcccctctccctctgcct 68
              ||||||||||||||||||||
Sbjct: 153940 cttcccctctccctctgcct 153921
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>gb|AC063949.21| Homo sapiens 12 BAC RP11-693J15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172984

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    ttcccctctccctctgcctt 69
             ||||||||||||||||||||
Sbjct: 66206 ttcccctctccctctgcctt 66225
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>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 76      ggggtcgaattcggaggatg 95
               ||||||||||||||||||||
Sbjct: 1600886 ggggtcgaattcggaggatg 1600905
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>dbj|AP003503.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-86D13, complete
             sequence
          Length = 175454

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    ttcccctctccctctgcctt 69
             ||||||||||||||||||||
Sbjct: 53126 ttcccctctccctctgcctt 53145
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>emb|CT010449.10| Mouse DNA sequence from clone RP23-347O24 on chromosome 12, complete
              sequence
          Length = 203697

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     cttcccctctccctctgcct 68
              ||||||||||||||||||||
Sbjct: 191092 cttcccctctccctctgcct 191111
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>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete
             sequence
          Length = 227816

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 37    cctcaccccccgcttcccctctccctct 64
             ||||||||||| || |||||||||||||
Sbjct: 39302 cctcacccccctctccccctctccctct 39275
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>ref|NM_193290.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3273

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 96   gaggaggggagcagcgagg 114
            |||||||||||||||||||
Sbjct: 3079 gaggaggggagcagcgagg 3097
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>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence
          Length = 257924

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     ccctctccctctgccttgc 71
              |||||||||||||||||||
Sbjct: 187081 ccctctccctctgccttgc 187099
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>gb|AF268473.1| Mus musculus microfibril-associated glycoprotein 1 (Magp1) gene,
            complete cds; and unknown gene
          Length = 10715

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   gaggatggaggaggggagc 107
            |||||||||||||||||||
Sbjct: 8504 gaggatggaggaggggagc 8486
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>gb|AC135512.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0057M06,
              complete sequence
          Length = 147673

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 96     gaggaggggagcagcgagg 114
              |||||||||||||||||||
Sbjct: 132064 gaggaggggagcagcgagg 132046
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>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0027P09, complete sequence
          Length = 171861

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 96    gaggaggggagcagcgagg 114
             |||||||||||||||||||
Sbjct: 36475 gaggaggggagcagcgagg 36457
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>ref|XM_423931.1| PREDICTED: Gallus gallus similar to aldose 1-epimerase (LOC426268),
           mRNA
          Length = 1328

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 88  ggaggatggaggaggggag 106
           |||||||||||||||||||
Sbjct: 108 ggaggatggaggaggggag 126
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>gb|AC147563.4| Mus musculus BAC clone RP23-231H21 from chromosome 10, complete
             sequence
          Length = 236428

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 49    cttcccctctccctctgcc 67
             |||||||||||||||||||
Sbjct: 70618 cttcccctctccctctgcc 70600
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>gb|AC147017.4| Pan troglodytes BAC clone RP43-77F5 from 7, complete sequence
          Length = 178288

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 45     cccgcttcccctctccctc 63
              |||||||||||||||||||
Sbjct: 160384 cccgcttcccctctccctc 160366
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>gb|AC122810.4| Mus musculus BAC clone RP23-276H4 from chromosome 10, complete sequence
          Length = 177681

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 49    cttcccctctccctctgcc 67
             |||||||||||||||||||
Sbjct: 56449 cttcccctctccctctgcc 56431
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>gb|AC098739.3| Mus musculus BAC clone RP23-122G2 from 6, complete sequence
          Length = 221146

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 88    ggaggatggaggaggggag 106
             |||||||||||||||||||
Sbjct: 52722 ggaggatggaggaggggag 52740
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>emb|Z93096.1|HS390B3 Human DNA sequence from clone CTA-390B3 on chromosome 22q12-13,
             complete sequence
          Length = 92510

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 43    cccccgcttcccctctccc 61
             |||||||||||||||||||
Sbjct: 76275 cccccgcttcccctctccc 76257
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 9      tccgacggcgagcagcccg 27
              |||||||||||||||||||
Sbjct: 718557 tccgacggcgagcagcccg 718539
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>emb|AL109824.24|HSJ1181N3 Human DNA sequence from clone RP5-1181N3 on chromosome 20 Contains
            the C20orf110 gene for chromosome 20 open reading frame
            110, the NCOA6 gene for the thyroid hormone receptor
            binding protein (KIAA0181), the 5' end of a novel gene
            and CpG islands, complete sequence
          Length = 92196

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 96   gaggaggggagcagcgagg 114
            |||||||||||||||||||
Sbjct: 7407 gaggaggggagcagcgagg 7389
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>gb|AC023165.20| Homo sapiens 3 BAC RP11-202D20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 92971

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 49    cttcccctctccctctgcc 67
             |||||||||||||||||||
Sbjct: 30248 cttcccctctccctctgcc 30230
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>emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chromosome 11 Contains the 3'
              end of a novel gene, complete sequence
          Length = 203827

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     ttcccctctccctctgcct 68
              |||||||||||||||||||
Sbjct: 155668 ttcccctctccctctgcct 155650
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>emb|X03365.1|BTBPTIG Bovine pancreatic trypsin inhibitor (BPTI) gene
          Length = 3998

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 49   cttcccctctccctctgcc 67
            |||||||||||||||||||
Sbjct: 2733 cttcccctctccctctgcc 2715
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>emb|AJ853839.1| Hordeum vulgare partial mRNA for putative WRKY3 protein
          Length = 415

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 12  gacggcgagcagcccgcga 30
           |||||||||||||||||||
Sbjct: 344 gacggcgagcagcccgcga 362
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>gb|AC158997.2| Mus musculus BAC clone RP24-176F12 from chromosome 9, complete sequence
          Length = 187558

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 52    cccctctccctctgccttg 70
             |||||||||||||||||||
Sbjct: 66097 cccctctccctctgccttg 66115
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>emb|CR749364.1| Homo sapiens mRNA; cDNA DKFZp686I10125 (from clone DKFZp686I10125)
          Length = 7420

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 49   cttcccctctccctctgcc 67
            |||||||||||||||||||
Sbjct: 1668 cttcccctctccctctgcc 1650
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>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    tcggggtcgaattcggagg 92
             |||||||||||||||||||
Sbjct: 40495 tcggggtcgaattcggagg 40513
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>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 93     atggaggaggggagcagcg 111
              |||||||||||||||||||
Sbjct: 773430 atggaggaggggagcagcg 773448
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>gb|AC024580.6| Homo sapiens chromosome 19 clone CTD-2621I17, complete sequence
          Length = 193609

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 45     cccgcttcccctctccctctgcc 67
              |||||||||||||||||| ||||
Sbjct: 167538 cccgcttcccctctccctttgcc 167516
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>emb|CR524180.1| Gallus gallus finished cDNA, clone ChEST772l18
          Length = 1214

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 88  ggaggatggaggaggggag 106
           |||||||||||||||||||
Sbjct: 14  ggaggatggaggaggggag 32
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>emb|BX942826.8| Mouse DNA sequence from clone RP23-34P2 on chromosome X, complete
             sequence
          Length = 40849

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 88    ggaggatggaggaggggag 106
             |||||||||||||||||||
Sbjct: 22577 ggaggatggaggaggggag 22595
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>gb|AC024951.31| Homo sapiens chromosome 8 clone RP11-104C10, complete sequence
          Length = 170023

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 43    cccccgcttcccctctccctctgcctt 69
             ||||| |||||||||||||||| ||||
Sbjct: 93503 ccccctcttcccctctccctcttcctt 93477
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>emb|BX932084.2| Gallus gallus finished cDNA, clone ChEST158m7
          Length = 988

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 88  ggaggatggaggaggggag 106
           |||||||||||||||||||
Sbjct: 88  ggaggatggaggaggggag 106
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 96       gaggaggggagcagcgagg 114
                |||||||||||||||||||
Sbjct: 15626794 gaggaggggagcagcgagg 15626776
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 96       gaggaggggagcagcgagg 114
                |||||||||||||||||||
Sbjct: 19903348 gaggaggggagcagcgagg 19903330
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>gb|AC133183.3| Mus musculus BAC clone RP24-185O19 from chromosome 12, complete sequence
          Length = 182948

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     ccctctccctctgccttgc 71
              |||||||||||||||||||
Sbjct: 145881 ccctctccctctgccttgc 145899
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>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBa0062A24
          Length = 148362

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 96   gaggaggggagcagcgagg 114
            |||||||||||||||||||
Sbjct: 6257 gaggaggggagcagcgagg 6239
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>emb|BX935155.1| Gallus gallus finished cDNA, clone ChEST862a17
          Length = 852

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 88  ggaggatggaggaggggag 106
           |||||||||||||||||||
Sbjct: 128 ggaggatggaggaggggag 146
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>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0047D12
          Length = 145981

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 96     gaggaggggagcagcgagg 114
              |||||||||||||||||||
Sbjct: 126306 gaggaggggagcagcgagg 126288
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>emb|BX932733.1| Gallus gallus finished cDNA, clone ChEST493i20
          Length = 662

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 88  ggaggatggaggaggggag 106
           |||||||||||||||||||
Sbjct: 118 ggaggatggaggaggggag 136
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>gb|AC104417.14| Homo sapiens chromosome 8, clone RP11-953B20, complete sequence
          Length = 186063

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 43     cccccgcttcccctctccctctgcctt 69
              ||||| |||||||||||||||| ||||
Sbjct: 146897 ccccctcttcccctctccctcttcctt 146871
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>gb|AC121863.3| Mus musculus chromosome UNK clone RP24-110O17, complete sequence
          Length = 142711

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 88    ggaggatggaggaggggag 106
             |||||||||||||||||||
Sbjct: 97820 ggaggatggaggaggggag 97802
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>emb|BX842238.2| Mouse DNA sequence from clone RP24-159M2 on chromosome 2, complete
             sequence
          Length = 86221

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    ttcccctctccctctgcct 68
             |||||||||||||||||||
Sbjct: 28326 ttcccctctccctctgcct 28308
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>gb|AC153505.6| Mus musculus 10 BAC RP23-336I13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190636

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    tcccctctccctctgcctt 69
             |||||||||||||||||||
Sbjct: 83113 tcccctctccctctgcctt 83095
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>dbj|AK066957.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094B07, full
           insert sequence
          Length = 756

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  gaggaggggagcagcgagg 114
           |||||||||||||||||||
Sbjct: 158 gaggaggggagcagcgagg 176
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>gb|AC108832.10| Mus musculus chromosome 7, clone RP23-242J3, complete sequence
          Length = 185083

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 49     cttcccctctccctctgcc 67
              |||||||||||||||||||
Sbjct: 114948 cttcccctctccctctgcc 114930
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>dbj|AP000827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-716D19, complete
             sequence
          Length = 168579

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    tcccctctccctctgcctt 69
             |||||||||||||||||||
Sbjct: 73694 tcccctctccctctgcctt 73712
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>gb|AC153696.3| Mus musculus 6 BAC RP24-562H2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 179614

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 88     ggaggatggaggaggggag 106
              |||||||||||||||||||
Sbjct: 169514 ggaggatggaggaggggag 169532
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>dbj|AP000648.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-76D16, complete
             sequence
          Length = 149744

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    tcccctctccctctgcctt 69
             |||||||||||||||||||
Sbjct: 11232 tcccctctccctctgcctt 11250
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>gb|AC166781.7| Mus musculus chromosome 8, clone RP24-158M8, complete sequence
          Length = 163096

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 49    cttcccctctccctctgcc 67
             |||||||||||||||||||
Sbjct: 47403 cttcccctctccctctgcc 47421
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>dbj|AK114180.1| Ciona intestinalis cDNA, clone:cicl043o11, full insert sequence
          Length = 1954

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 87  cggaggatggaggagggga 105
           |||||||||||||||||||
Sbjct: 727 cggaggatggaggagggga 745
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>gb|AC109203.9| Mus musculus chromosome 18, clone RP23-2B18, complete sequence
          Length = 216783

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 52     cccctctccctctgccttg 70
              |||||||||||||||||||
Sbjct: 101816 cccctctccctctgccttg 101834
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>emb|AL832211.1|HSM803518 Homo sapiens mRNA; cDNA DKFZp686N112 (from clone DKFZp686N112)
          Length = 6386

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 49  cttcccctctccctctgcc 67
           |||||||||||||||||||
Sbjct: 430 cttcccctctccctctgcc 412
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 96       gaggaggggagcagcgagg 114
                |||||||||||||||||||
Sbjct: 15714171 gaggaggggagcagcgagg 15714153
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>gb|AC140672.5| Mus musculus BAC clone RP24-208P4 from chromosome 8, complete sequence
          Length = 212819

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 49     cttcccctctccctctgcc 67
              |||||||||||||||||||
Sbjct: 103496 cttcccctctccctctgcc 103478
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>emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on chromosome 4, complete
              sequence
          Length = 182829

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 88     ggaggatggaggaggggagcagc 110
              ||||||||| |||||||||||||
Sbjct: 162781 ggaggatgggggaggggagcagc 162803
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>emb|AL645625.15| Mouse DNA sequence from clone RP23-183L1 on chromosome 4, complete
             sequence
          Length = 226754

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    gaggatggaggaggggagc 107
             |||||||||||||||||||
Sbjct: 98191 gaggatggaggaggggagc 98173


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,056,202
Number of Sequences: 3902068
Number of extensions: 1056202
Number of successful extensions: 94377
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94083
Number of HSP's gapped (non-prelim): 294
length of query: 114
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 93
effective length of database: 17,151,101,840
effective search space: 1595052471120
effective search space used: 1595052471120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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