>ref|NM_187173.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2688

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 188 cctctgccgtcgccgccgtcgaggtcggagactacgtggctgctatcgcctccgccg 244
           |||| ||||||||||||||||| | ||| ||||||| ||| ||  ||||||||||||
Sbjct: 143 cctccgccgtcgccgccgtcgacgccggcgactacgcggccgccctcgcctccgccg 199

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                         
Query: 188      cctctgccgtcgccgccgtcgaggtcggagactacgtggctgctatcgcctccgccg 244
                |||| ||||||||||||||||| | ||| ||||||| ||| ||  ||||||||||||
Sbjct: 15733636 cctccgccgtcgccgccgtcgacgccggcgactacgcggccgccctcgcctccgccg 15733580

>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0075N02
          Length = 186945

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                       
Query: 188    cctctgccgtcgccgccgtcgaggtcggagactacgtggctgctatcgcctccgccg 244
              |||| ||||||||||||||||| | ||| ||||||| ||| ||  ||||||||||||
Sbjct: 131493 cctccgccgtcgccgccgtcgacgccggcgactacgcggccgccctcgcctccgccg 131437

>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 193    gccgtcgccgccgtcgaggtcg 214
              ||||||||||||||||||||||
Sbjct: 262709 gccgtcgccgccgtcgaggtcg 262730

>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08,
              complete sequence
          Length = 132017

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 193    gccgtcgccgccgtcgaggtc 213
              |||||||||||||||||||||
Sbjct: 128750 gccgtcgccgccgtcgaggtc 128770

>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0084P24, complete sequence
          Length = 148784

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 193   gccgtcgccgccgtcgaggtc 213
             |||||||||||||||||||||
Sbjct: 78362 gccgtcgccgccgtcgaggtc 78382

>gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0068E24, complete sequence
          Length = 141492

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 188    cctctgccgtcgccgccgtcg 208
              |||||||||||||||||||||
Sbjct: 134080 cctctgccgtcgccgccgtcg 134060

>gb|AE011783.1| Xanthomonas axonopodis pv. citri str. 306,  section 161 of 469 of the
             complete genome
          Length = 12465

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 318   cactgccgctgccgaggcgtt 338
             |||||||||||||||||||||
Sbjct: 11267 cactgccgctgccgaggcgtt 11247

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 188      cctctgccgtcgccgccgtcg 208
                |||||||||||||||||||||
Sbjct: 22981573 cctctgccgtcgccgccgtcg 22981553

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 193      gccgtcgccgccgtcgaggtc 213
                |||||||||||||||||||||
Sbjct: 20240090 gccgtcgccgccgtcgaggtc 20240110

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 270     cttcgccgaggttgcccaggg 290
               |||||||||||||||||||||
Sbjct: 1091823 cttcgccgaggttgcccaggg 1091843

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 188      cctctgccgtcgccgccgtcg 208
                |||||||||||||||||||||
Sbjct: 23291483 cctctgccgtcgccgccgtcg 23291463

>ref|XM_472176.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 ctgccgtcgccgccgtcgag 210
           ||||||||||||||||||||
Sbjct: 31  ctgccgtcgccgccgtcgag 50

>ref|XM_762134.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_113_4136_3006)
           partial mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 ttacgccgacctcactgccg 325
           ||||||||||||||||||||
Sbjct: 976 ttacgccgacctcactgccg 957

>gb|AY330485.1| Saccharopolyspora erythraea amino acid permease gene, partial cds;
            transport protein, helix-turn-helix regulator (pkeRI),
            P450 monooxygenase (pkePI), P450 monooxygenase (pkePII),
            P450 monooxygenase (pkePIII), type I PKS (pkeAI), type I
            PKS (pkeAII), and type I PKS (pkeAIII) genes, complete
            cds; pkeAIV gene, complete sequence; type I PKS,
            monooxygenases, transporter, ketoacyl-ACP synthase
            (typeII), acyl carrier protien, amino transferase, and
            DNA-binding protein genes, complete cds; and unknown
            genes
          Length = 68451

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   ggccacggccatggcggcga 61
            ||||||||||||||||||||
Sbjct: 2218 ggccacggccatggcggcga 2199

>gb|AY044272.1| Pseudomonas sp. B13 3-oxoadipate:succinyl-CoA transferase subunit A
            (catI), 3-oxoadipate:succinyl-CoA transferase subunit B
            (catJ), 3-oxoadipyl-CoA thiolase (catF), and 3-oxoadipate
            enol-lactone hydrolase (catD) genes, complete cds; and
            unknown gene
          Length = 5888

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 41   cggccacggccatggcggcgaccaccgc 68
            |||||||||| | |||||||||||||||
Sbjct: 2146 cggccacggcgaaggcggcgaccaccgc 2173

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    cgtcgccgccgtcgaggtcg 214
              ||||||||||||||||||||
Sbjct: 133813 cgtcgccgccgtcgaggtcg 133794

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 191      ctgccgtcgccgccgtcgag 210
                ||||||||||||||||||||
Sbjct: 18214189 ctgccgtcgccgccgtcgag 18214170

>gb|AE005120.1| Halobacterium sp. NRC-1 section 151 of 170 of the complete genome
          Length = 10179

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 195  cgtcgccgccgtcgaggtcg 214
            ||||||||||||||||||||
Sbjct: 7401 cgtcgccgccgtcgaggtcg 7420

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     cgtcgccgccgtcgaggtcg 214
               ||||||||||||||||||||
Sbjct: 2658652 cgtcgccgccgtcgaggtcg 2658633

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 34      tcgccaccggccacggccat 53
               ||||||||||||||||||||
Sbjct: 3074022 tcgccaccggccacggccat 3074003

>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17,
             complete sequence
          Length = 147111

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   ctgccgtcgccgccgtcgag 210
             ||||||||||||||||||||
Sbjct: 49863 ctgccgtcgccgccgtcgag 49844


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,021,922
Number of Sequences: 3902068
Number of extensions: 2021922
Number of successful extensions: 134403
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133725
Number of HSP's gapped (non-prelim): 678
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)