Clone Information

BLAST Search Result

Clone Name	bastl44a11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6	35	0.034
2	PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)	34	0.076
3	ABP1_SACEX (P38479) Actin-binding protein	33	0.17
4	HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated...	33	0.22
5	CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)	33	0.22
6	HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated c...	32	0.37
7	LY10_HUMAN (Q13342) Nuclear body protein SP140 (Nuclear autoanti...	32	0.37
8	HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated...	32	0.49
9	ARI5B_MOUSE (Q8BM75) AT-rich interactive domain-containing prote...	31	0.84
10	DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polype...	31	0.84
11	CSKI2_HUMAN (Q8WXE0) Caskin-2	30	1.1
12	EXTN_DAUCA (P06599) Extensin precursor	30	1.4
13	MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia p...	30	1.4
14	CSPG5_MOUSE (Q71M36) Chondroitin sulfate proteoglycan 5 precurso...	30	1.9
15	DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polype...	29	2.4
16	DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypept...	29	2.4
17	SPAST_HUMAN (Q9UBP0) Spastin	29	2.4
18	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	29	3.2
19	WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7...	29	3.2
20	PRP45_ASHGO (Q759B6) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-pr...	29	3.2
21	NUT1_MAGGR (Q01168) Nitrogen regulatory protein NUT1	29	3.2
22	VGF_HUMAN (O15240) Neurosecretory protein VGF precursor	29	3.2
23	BCL2_BOVIN (O02718) Apoptosis regulator Bcl-2	29	3.2
24	SP5_MOUSE (Q9JHX2) Transcription factor Sp5	29	3.2
25	PHAR2_HUMAN (O75167) Phosphatase and actin regulator 2	29	3.2
26	SRA1_HUMAN (Q9HD15) Steroid receptor RNA activator 1 (Steroid re...	28	4.1
27	Y095_TREPA (O83133) Hypothetical protein TP0095	28	4.1
28	ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline...	28	4.1
29	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	28	4.1
30	CILP2_HUMAN (Q8IUL8) Cartilage intermediate layer protein 2 prec...	28	5.4
31	VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6...	28	5.4
32	PAT1_YEAST (P25644) Topoisomerase II-associated protein PAT1	28	5.4
33	COX2_BACPF (Q04441) Cytochrome c oxidase subunit 2 precursor (EC...	28	5.4
34	VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6...	28	5.4
35	HXB2_HUMAN (P14652) Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8)	28	5.4
36	EXON_HHV2 (P06489) Alkaline exonuclease (EC 3.1.11.-)	28	5.4
37	CEBPB_BOVIN (O02755) CCAAT/enhancer-binding protein beta (C/EBP ...	28	5.4
38	CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2....	28	5.4
39	HP27_TAMSI (Q06577) Hibernation-associated plasma protein HP-27 ...	28	7.1
40	RYR1_PIG (P16960) Ryanodine receptor 1 (Skeletal muscle-type rya...	28	7.1
41	DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)	28	7.1
42	ZCHC8_XENLA (Q6DD45) Zinc finger CCHC domain-containing protein 8	28	7.1
43	ODO2_PIG (Q9N0F1) Dihydrolipoyllysine-residue succinyltransferas...	28	7.1
44	ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing prote...	28	7.1
45	SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) ...	28	7.1
46	SRPK2_MOUSE (O54781) Serine/threonine-protein kinase SRPK2 (EC 2...	28	7.1
47	NRFA_PENUR (Q92269) Nitrogen regulatory protein nrfA	28	7.1
48	SYC_SYNPX (Q7U8C0) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst...	28	7.1
49	TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)	28	7.1
50	OPSD_TODPA (P31356) Rhodopsin	28	7.1
51	CAPU_DROME (Q24120) Protein cappuccino	28	7.1
52	MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosi...	27	9.2
53	CNTRB_HUMAN (Q8N137) Centrobin (LYST-interacting protein 8)	27	9.2
54	DYNA_XENLA (Q6PCJ1) Dynactin-1	27	9.2
55	FRAH_ANASP (P46017) Protein fraH	27	9.2
56	WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protei...	27	9.2
57	MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)	27	9.2
58	EXPA_DROME (Q07436) Protein expanded	27	9.2
59	DDEF2_HUMAN (O43150) Development and differentiation-enhancing f...	27	9.2
60	FA40A_HUMAN (Q5VSL9) Protein FAM40A	27	9.2
61	SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich...	27	9.2
62	SP5_HUMAN (Q6BEB4) Transcription factor Sp5	27	9.2
63	PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicas...	27	9.2
64	PDE3B_RAT (Q63085) cGMP-inhibited 3',5'-cyclic phosphodiesterase...	27	9.2
65	TS101_RAT (Q6IRE4) Tumor susceptibility gene 101 protein	27	9.2

>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6|
          Length = 704

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 24/64 (37%), Positives = 29/64 (45%)
 Frame = +2

Query: 53  PPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPEPGFP 232
           PP V A   E  G P    GE +G  G E       AE+  R   A+ E   G P+ G P
Sbjct: 17  PPEVPAPLAERPGEPGAAGGEAEGPEGSE------GAEEAPRGAAAVKEAGGGGPDRG-P 69

Query: 233 DAEA 244
           +AEA
Sbjct: 70  EAEA 73

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>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)|
          Length = 939

 Score = 34.3 bits (77), Expect = 0.076
 Identities = 23/70 (32%), Positives = 27/70 (38%)
 Frame = +2

Query: 35  CFSSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGE 214
           C  +  PP + A PP    APS   GE    A     C   SA     A+  +   A G 
Sbjct: 416 CVFADAPPALPALPPLPPRAPSSRPGEGAPAAAAAAGCSASSASSPGPALECVLYKAEGA 475

Query: 215 PEPGFPDAEA 244
           P P  P A A
Sbjct: 476 PPPQGPFAAA 485

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>ABP1_SACEX (P38479) Actin-binding protein|
          Length = 617

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +2

Query: 50  LPPPVMAAPPETTGAPSPPEGEDKG--NAGVEVCCFEQSAEDFSRAVRAISELAAGEPEP 223
           +PPPVM A       P PP   +      G E    E+  E+ + A    S  AA EPEP
Sbjct: 459 IPPPVMPARESAPQQPLPPRNTEPEPVEEGEEEEEEEEEEEEEAPAPSLPSRNAAPEPEP 518

Query: 224 GFPDAEAE 247
             P  E E
Sbjct: 519 EQPQEEEE 526

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>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4 (Hyperpolarization-activated
           cation channel 4) (HAC-4)
          Length = 1175

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 25/63 (39%), Positives = 30/63 (47%)
 Frame = +2

Query: 56  PPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPEPGFPD 235
           PP +AA PE  GAP+PP         V   C EQ   D   AV+     AAG+     P+
Sbjct: 152 PPGLAAEPERPGAPAPPAASP---PQVPSSCGEQRPAD--AAVKVEGGAAAGDQI--LPE 204

Query: 236 AEA 244
           AEA
Sbjct: 205 AEA 207

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>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +2

Query: 53   PPPVMAAPPETTGAP-SPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPEPGF 229
            PP   AA      AP +PPEG   G++  +    E+++   + A++A+ E    E   G 
Sbjct: 1342 PPRAAAAAAAAAAAPPAPPEGASPGDSARQK--LEETSACLAAALQAVEEKIRQEDAQGP 1399

Query: 230  PDAEAERLASSI 265
             D+ AE+   SI
Sbjct: 1400 RDSAAEKSTGSI 1411

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>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2
          Length = 863

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
 Frame = +2

Query: 11  GSKP*NTPCFSSLLPPPVMA--------APPETTGAPSPPEGEDKGNAGVEVCCFEQSAE 166
           G  P  TP      PPP  A        APP     PS PE  D+      +C  + S  
Sbjct: 11  GDSPGTTPAPGPPPPPPPPAPLQLQPPPAPPPNPTTPSHPESADEPGPRSRLCSRDSSCT 70

Query: 167 DFSRAVRAISELAAGEPE 220
             +    A  E   GEP+
Sbjct: 71  PGAAKGGANGECGRGEPQ 88

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>LY10_HUMAN (Q13342) Nuclear body protein SP140 (Nuclear autoantigen Sp-140)|
           (Speckled 140 kDa) (LYSp100 protein)
           (Lymphoid-restricted homolog of Sp100)
          Length = 882

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 24/82 (29%), Positives = 35/82 (42%)
 Frame = +2

Query: 26  NTPCFSSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELA 205
           +T  F    P       PE   +  P EGE+  +   E+C  E+  E  S   R  S  +
Sbjct: 357 STETFDLKTPQVTNEGEPEKELSLLPGEGEEGSDDCSEMCDGEERQEASSSLARRGSVSS 416

Query: 206 AGEPEPGFPDAEAERLASSITF 271
             E  P   + E+E LASS+ +
Sbjct: 417 ELENHPMNEEGESEELASSLLY 438

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>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2) (Hyperpolarization-activated
           cation channel 1) (HAC-1)
          Length = 863

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
 Frame = +2

Query: 11  GSKP*NTPCFSSLLPPPVMA--------APPETTGAPSPPEGEDKGNAGVEVCCFEQSAE 166
           G  P  TP      PPP  A        APP     PS PE  D+      +C  + +  
Sbjct: 11  GDSPGTTPAPGPPPPPPPPAPPQPQPPPAPPPNPTTPSHPESADEPGPRARLCSRDSACT 70

Query: 167 DFSRAVRAISELAAGEPE 220
             +    A  E   GEP+
Sbjct: 71  PGAAKGGANGECGRGEPQ 88

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>ARI5B_MOUSE (Q8BM75) AT-rich interactive domain-containing protein 5B (ARID|
           domain-containing protein 5B) (MRF1-like) (Modulator
           recognition factor protein 2) (MRF-2) (Developmentally
           and sexually retarded with transient immune
           abnormalities protein)
          Length = 1188

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
 Frame = +2

Query: 47  LLPPPVMAAPPETTGAPSP---------PEGEDKGNAGVEVCCFEQSAEDFSRAVRAISE 199
           LLP P +  PPE   AP+P         P  +       + CCF +S E   +     S 
Sbjct: 541 LLPSPPL--PPEKDSAPTPGAGKQPLASPSTQMDSKQEAKPCCFTESPEKDLQGAPFSSF 598

Query: 200 LAAGEPEPGFPDAEAERLASSITFL 274
            A   P     +AE E+L ++  ++
Sbjct: 599 SATKPPLTSQNEAEEEQLPATANYI 623

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>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued) (p135)
          Length = 1278

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 2   SSRGSKP*NTPCFSSLLPPPVMAAPPETTGAPSPPEGED 118
           SS  S P  TP  + ++P PV+ +P      PSP + E+
Sbjct: 180 SSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEE 218

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>CSKI2_HUMAN (Q8WXE0) Caskin-2|
          Length = 1202

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/72 (23%), Positives = 31/72 (43%)
 Frame = +2

Query: 53   PPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPEPGFP 232
            P PV    PE+TG   P + + +          EQ++   + A+RA  +    + + G P
Sbjct: 1125 PRPVPPPRPESTGTVGPGQAQQR---------LEQTSSSLAAALRAAEKSIGTKEQEGTP 1175

Query: 233  DAEAERLASSIT 268
             A  + +   I+
Sbjct: 1176 SASTKHILDDIS 1187

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>EXTN_DAUCA (P06599) Extensin precursor|
          Length = 306

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 14  SKP*NTPCFSSLLPPPVMAAPPETTGAPSPPE 109
           S P  TP +    PPP M +PP    +P PP+
Sbjct: 261 SPPPPTPVYKYKSPPPPMHSPPPPVYSPPPPK 292

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>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
           (Trithorax homolog 2)
          Length = 2715

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 17/97 (17%)
 Frame = +2

Query: 53  PPPVMAAPPETTGAPSPPEGEDKGNAGVEV----CCFEQSAEDFSRAVRAISELAAGEPE 220
           PPP   +PP     P PP  E++  +   V    C  ++     + + RA  E A   PE
Sbjct: 431 PPPPPVSPPPLPSPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPSQRAEREAARAGPE 490

Query: 221 ------------PGFPDAEAERLA-SSITFLREWRHF 292
                        G P  ++  +A  S TFL+  R F
Sbjct: 491 GTSPPTPTPSTATGGPPEDSPTVAPKSTTFLKNIRQF 527

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>CSPG5_MOUSE (Q71M36) Chondroitin sulfate proteoglycan 5 precursor (Neuroglycan|
           C) (Acidic leucine-rich EGF-like domain-containing brain
           protein)
          Length = 566

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
 Frame = +2

Query: 41  SSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPE 220
           SS +PP +  A  ET+G PSP    DK + G E+       ++    VR    L    PE
Sbjct: 142 SSTMPPAIPEAT-ETSGPPSPAV-HDKPSVGPEL------PKEIPLEVRL--NLGGSTPE 191

Query: 221 PGFP--DAEAERLASSITFLREWRHFNYEPKGVSFTHGTGSTSSRDN 355
           P FP       + AS I  +  +   + E +G       GS  + +N
Sbjct: 192 PTFPLQGTLETQPASDIIDIDYFEGLDSEGRGADMGSFPGSPGTSEN 238

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>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1281

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 2   SSRGSKP*NTPCFSSLLPPPVMAAPPETTGAPSPPEGED 118
           SS  S P  TP  + ++P P + +P      PSP + E+
Sbjct: 180 SSEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEE 218

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>DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1280

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 2   SSRGSKP*NTPCFSSLLPPPVMAAPPETTGAPSPPEGED 118
           SS  S P  TP  + ++P P + +P      PSP + E+
Sbjct: 180 SSEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEE 218

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>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 25/92 (27%)
 Frame = +2

Query: 53  PPPVMAAPPETTGAPSPPEGEDKGN------------AGVEVCCFEQS------AEDFSR 178
           PPP +A  P   G   PPE   K N            A + +  F          + FSR
Sbjct: 25  PPPCLAPAPPAAGPAPPPESPHKRNLYYFSYPLFVGFALLRLVAFHLGLLFVWLCQRFSR 84

Query: 179 AVRAISELAAGEPEPG-------FPDAEAERL 253
           A+ A    +   P P         P  EAER+
Sbjct: 85  ALMAAKRSSGAAPAPASASAPAPVPGGEAERV 116

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +2

Query: 53   PPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPEPG 226
            P P   APP     P PP G D   +G+E      S++     + + S L++   E G
Sbjct: 1657 PAPAAPAPPAPQPGPDPPPGTD---SGIEEVDSRSSSDHPLETISSASTLSSLSAEGG 1711

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>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein|
            kinase with no lysine 4) (Protein kinase,
            lysine-deficient 4)
          Length = 1243

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +2

Query: 41   SSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPE 220
            S   PPP    P E   AP   EG+ +     +V   ++ AE     ++  S   +G P+
Sbjct: 986  SEASPPPARPLPGEARLAPISEEGKPQLVGRFQVTSSKEPAEPL--PLQPTSPTLSGSPK 1043

Query: 221  PGFPDAEAE 247
            P  P   +E
Sbjct: 1044 PSTPQLTSE 1052

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>PRP45_ASHGO (Q759B6) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-processing|
           protein 45)
          Length = 443

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 26  NTPCFSSLLPPPVMAAPPETTGAPSPPEGE-DKGNAGV 136
           N+  FS+LLPPP   + P    A   PE + D+  AG+
Sbjct: 2   NSAPFSTLLPPPKKESSPTVASAHQSPENQGDEPVAGI 39

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>NUT1_MAGGR (Q01168) Nitrogen regulatory protein NUT1|
          Length = 956

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
 Frame = +2

Query: 65  MAAPPETTGAPS-------PPEGEDKGNAGVEVCCFEQSAEDF--SRAVRAISELAAGEP 217
           +++PP  T APS           + K +AG      E S +DF  S    A S LA+  P
Sbjct: 127 ISSPPLKTNAPSGIAQQLRQTPTQKKSSAG------EMSLDDFIDSSHGSATSGLASSSP 180

Query: 218 EPGFPDAEAERLASS 262
           E G PD+ +    SS
Sbjct: 181 EAGKPDSTSTNAISS 195

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>VGF_HUMAN (O15240) Neurosecretory protein VGF precursor|
          Length = 616

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
 Frame = +2

Query: 68  AAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDF-SRAVRAISEL--AAGEPEPGFP-- 232
           A+PP  +G+   PE              E++AE   +  VR+ +    AAGEPEP  P  
Sbjct: 94  ASPPAPSGSQQGPE--------------EEAAEALLTETVRSQTHSLPAAGEPEPAAPPR 139

Query: 233 ----------DAEAERLASSITFLREWRHFNYEPKGVSFTHGTGSTSSRDNTHEIT 370
                        +E L +  + L+E R F+  P        T +  +   TH +T
Sbjct: 140 PQTPENGPEASDPSEELEALASLLQELRDFS--PSSAKRQQETAAAETETRTHTLT 193

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>BCL2_BOVIN (O02718) Apoptosis regulator Bcl-2|
          Length = 229

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/58 (34%), Positives = 24/58 (41%)
 Frame = +2

Query: 14  SKP*NTPCFSSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVR 187
           S+P  TP  S   PPP  AA      +P PP         V      Q+ +DFSR  R
Sbjct: 51  SQPGRTPAPSRTSPPPPPAAAAGPAPSPVPP---------VVHLTLRQAGDDFSRRYR 99

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>SP5_MOUSE (Q9JHX2) Transcription factor Sp5|
          Length = 398

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
 Frame = +2

Query: 32  PCFSSLLPPPVMAAPPET----TGAPSPPE---------GEDKGNAGVEVCCFEQSAEDF 172
           P +S+LLPPP    PP T    + AP+P +         G   G++GV            
Sbjct: 157 PGYSNLLPPPPPPPPPPTCRQLSPAPAPDDLPWWSIPQSGAGPGSSGV------------ 204

Query: 173 SRAVRAISELAAGEPE-PGFPDAEAERLASSITFLR 277
                ++S   AG P  P FP + A   A++    R
Sbjct: 205 --PGTSLSSACAGPPHAPRFPASAAAAAAAAAALQR 238

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>PHAR2_HUMAN (O75167) Phosphatase and actin regulator 2|
          Length = 634

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 11  GSKP*NTPCFSSLLPPPVMAAPPETTGAPSPPEGE 115
           G++  NT  F S++PPP +A  P     P P E +
Sbjct: 311 GAEEQNTGKFKSMVPPPPVAPAPSPLAPPLPLEDQ 345

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>SRA1_HUMAN (Q9HD15) Steroid receptor RNA activator 1 (Steroid receptor RNA|
           activator protein) (SRAP)
          Length = 236

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
 Frame = +2

Query: 53  PPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCF----EQSAEDFSRAVRAISELAAGEPE 220
           PPP+   PP +    SPP G     +GVE   F    E   ED  R +    E   G   
Sbjct: 72  PPPMGPPPPSSKAPRSPPVGSGPA-SGVEPTSFPVESEAVMEDVLRPLEQALEDCRGHTR 130

Query: 221 PGFPDAEAERLA 256
               D  + RLA
Sbjct: 131 KQVCDDISRRLA 142

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>Y095_TREPA (O83133) Hypothetical protein TP0095|
          Length = 648

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
 Frame = +2

Query: 158 SAEDFSRAVRAISELAAGEPEPG--FPDAEA--ERLASSITFLREWRHFNYEPKGVSFTH 325
           S  D++RA+R + ELAA     G   PD  A  ER A       EW       +G S +H
Sbjct: 16  SVRDYARAIRILEELAASGKAEGCHHPDGGAVYERGAQ-----EEWN------EGSSESH 64

Query: 326 GTGSTSSRDNTHEITL 373
             G   ++D   EI L
Sbjct: 65  AHGGDGTQDAYPEIYL 80

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>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +2

Query: 32  PCFSSLLPPPVMAAPP---ETTGAPSPP 106
           P ++S LPPP    PP    +TG P PP
Sbjct: 555 PAYASALPPPPGPPPPPPLPSTGPPPPP 582

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 10/53 (18%)
 Frame = +2

Query: 5   SRGSKP*NTPCFSSLLPPPVMAAPPETTG----------APSPPEGEDKGNAG 133
           SRG  P  +P  S   PPP   APP + G           PSP  G    + G
Sbjct: 102 SRGFNPPPSPVISPSHPPPSYGAPPPSHGPGHLPSHGQRPPSPSHGHAPPSGG 154

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>CILP2_HUMAN (Q8IUL8) Cartilage intermediate layer protein 2 precursor (CILP-2)|
            [Contains: Cartilage intermediate layer protein 2 C1;
            Cartilage intermediate layer protein 2 C2]
          Length = 1156

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 18/96 (18%)
 Frame = +2

Query: 53   PPPVMAAPPETTG--APSPPEGEDKGNAGV---------EVC---CFEQSAEDFSRAVRA 190
            PPPV A  P      AP  P G + G   V         E+    CF+ S++ FSR ++A
Sbjct: 1035 PPPVPAEDPAAFSMLAPLDPLGHNYGVYTVTDQSPRLAKEIAIGRCFDGSSDGFSREMKA 1094

Query: 191  ISELA----AGEPEPGFPDAEAERLASSITFLREWR 286
             +  A      EP  G P      L S  T L + R
Sbjct: 1095 DAGTAVTFQCREPPAGRPSLFQRLLESPATALGDIR 1130

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>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)|
           (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130)
           (Glycoprotein B)
          Length = 932

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +2

Query: 32  PCFSSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISEL--A 205
           P  +   PPP  AA P    +PSPP G D  +A         ++ D S  VRA   L  A
Sbjct: 69  PATTPPAPPPEEAASPAPPASPSPP-GPDGDDA---------ASPDNSTDVRAALRLAQA 118

Query: 206 AGE 214
           AGE
Sbjct: 119 AGE 121

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>PAT1_YEAST (P25644) Topoisomerase II-associated protein PAT1|
          Length = 796

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 44  SLLPPPVMAAPPETTGAPSP 103
           S  PPP MA  P++T AP+P
Sbjct: 111 STAPPPAMAPSPQSTMAPAP 130

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>COX2_BACPF (Q04441) Cytochrome c oxidase subunit 2 precursor (EC 1.9.3.1)|
           (Cytochrome c oxidase polypeptide II) (Cytochrome aa3
           subunit 2) (Oxidase aa(3) subunit 2)
          Length = 342

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = +2

Query: 86  TGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPEPGFPDAEAERLASSI 265
           TG  + P   + G   V     E + E+    +R    L  G   P +PD   E + + I
Sbjct: 273 TGTAAGPAFTNFGEREVIAGYLENNDENLEAWIRDPQSLKQGNVMPAYPDMSEEDMEALI 332

Query: 266 TFLR 277
            +LR
Sbjct: 333 AYLR 336

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>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)|
           (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130)
          Length = 928

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +2

Query: 32  PCFSSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISEL--A 205
           P  +   PPP  AA P    +PSPP G D  +A         ++ D S  VRA   L  A
Sbjct: 69  PATTPPAPPPEEAASPAPPASPSPP-GPDGDDA---------ASPDNSTDVRAALRLAQA 118

Query: 206 AGE 214
           AGE
Sbjct: 119 AGE 121

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>HXB2_HUMAN (P14652) Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8)|
          Length = 356

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 23/64 (35%), Positives = 28/64 (43%)
 Frame = +2

Query: 53  PPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPEPGFP 232
           PPP+ AAPP    AP  P  ++K +A        QSA   S A  A+     G P  G  
Sbjct: 83  PPPLPAAPP----APEFPWMKEKKSAKKP----SQSATSPSPAASAVPASGVGSPADGLG 134

Query: 233 DAEA 244
             EA
Sbjct: 135 LPEA 138

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>EXON_HHV2 (P06489) Alkaline exonuclease (EC 3.1.11.-)|
          Length = 620

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
 Frame = +2

Query: 71  APPETT--GAP------SPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPEPG 226
           APP  T  GAP      SPP G+  G A           E    A  A+SE ++G P P 
Sbjct: 42  APPRPTSPGAPGSHWPQSPPRGQPDGGA---------PGEKARPASPALSEASSGPPTPD 92

Query: 227 FP 232
            P
Sbjct: 93  IP 94

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>CEBPB_BOVIN (O02755) CCAAT/enhancer-binding protein beta (C/EBP beta)|
          Length = 348

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 30/109 (27%), Positives = 39/109 (35%), Gaps = 1/109 (0%)
 Frame = +2

Query: 35  CFSSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGE 214
           CF+ L PPP           P PP  E K   G E         D  R           +
Sbjct: 156 CFAPLHPPP----------PPPPPPAELKAEPGFE-------PADCKR-----------K 187

Query: 215 PEPGFPDAEAERLASSITF-LREWRHFNYEPKGVSFTHGTGSTSSRDNT 358
            E G P   A  +A+   + LR +  +   P G S +  T S+SS   T
Sbjct: 188 EEAGAPGGGAAGMAAGFPYALRAYLGYQAVPSGSSGSLSTSSSSSPPGT 236

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>CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal|
           transduction protein CBL-B) (SH3-binding protein CBL-B)
          Length = 982

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 27/120 (22%), Positives = 41/120 (34%), Gaps = 24/120 (20%)
 Frame = +2

Query: 2   SSRGSKP*NTPCFSSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVC----------CF 151
           +S    P ++PC       P+ A PP     P PPE           C          C 
Sbjct: 534 ASPTGSPKSSPCMVRKQDKPLPAPPPPLREPPPPPERPPPIPPDSRTCRHLHHTENVPCR 593

Query: 152 EQSAEDFSRAVRAISELAA---------GEPEPGFPDAEA-----ERLASSITFLREWRH 289
           +QS +  +   R IS  +          G P+ G P +        R+++   F+R   H
Sbjct: 594 DQSTQHDAWCTRDISGASQPSICRVAHDGSPKLGVPSSSVLNGRHSRMSTEAGFIRHKHH 653

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>HP27_TAMSI (Q06577) Hibernation-associated plasma protein HP-27 precursor|
           (Hibernator-specific blood complex, 27 kDa subunit)
          Length = 215

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
 Frame = +2

Query: 56  PPVMAAPPETTGAPSPPEGE-------DKGNAGVEVCCFEQSAEDFSRAVRAISELAAGE 214
           PP M  PP T G P PP            G  G+ V C  +    F  AV+A +EL    
Sbjct: 47  PPGMRGPPGTPGKPGPPGWNGFPGLPGPPGPPGMTVNCHSKGTSAF--AVKA-NELPPAP 103

Query: 215 PEP 223
            +P
Sbjct: 104 SQP 106

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>RYR1_PIG (P16960) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5035

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 50   LPPPVMAAPPETTGAPSPPEGEDKGNAGVE 139
            +P P    P +T   P PP+ E+ G+ G+E
Sbjct: 4508 VPKPPPEPPKKTAPPPPPPKKEEGGSGGLE 4537

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>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)|
          Length = 302

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +2

Query: 32  PCFSSLLPPPVMAAPPETTGAPS-PPEGEDKGNAG 133
           PC   + PPP    P    GAP  P +  DKG AG
Sbjct: 139 PC-EEITPPPCKPCPQGPPGAPGLPGDQGDKGEAG 172

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>ZCHC8_XENLA (Q6DD45) Zinc finger CCHC domain-containing protein 8|
          Length = 743

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
 Frame = +2

Query: 8   RGSKP*NTPCFSSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQ-SAEDFSRAV 184
           RG+ P   P F    PPP    PP   G P P    D      +V   +  + E+     
Sbjct: 472 RGTPPSTPPNFIPP-PPPTPTPPPLPKGTPPPTPNRDSPKVPPQVLDEDTWTLEELEEKQ 530

Query: 185 RAI-SELAAGEPEPGFPDAEAERLASSIT 268
           R + ++L  GE      DA      SS+T
Sbjct: 531 RLLWAQLDNGESTNSDCDAHTPITVSSVT 559

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>ODO2_PIG (Q9N0F1) Dihydrolipoyllysine-residue succinyltransferase component|
           of 2-oxoglutarate dehydrogenase complex, mitochondrial
           precursor (EC 2.3.1.61) (Dihydrolipoamide
           succinyltransferase component of 2-oxoglutarate
           dehydrogenase complex) (E2) (E2K)
          Length = 455

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 32  PCFSSLLPPPVMAAPPETTGAPSPPE 109
           P  S++ PPP  + P +    PSPP+
Sbjct: 169 PAVSAVPPPPAASIPTQMPPVPSPPQ 194

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>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4 (KAISO-like|
            zinc finger protein 1) (KAISO-L1)
          Length = 1013

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2

Query: 53   PPPVMAAPPETTGAPSPPEGEDKGNAGVE 139
            PP     PP T   P PP+GE +  AGVE
Sbjct: 978  PPAPPTPPPPTLPPPIPPKGEGE-RAGVE 1005

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>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian
           branch point-binding protein mBBP) (BBP)
          Length = 639

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 44  SLLPPPVMAAPPETTGAPSPPEGEDKGNAGV 136
           +++P P    PP   GAP PP     G+AG+
Sbjct: 565 TMVPLPPGVQPPLPPGAPPPPPPPPPGSAGM 595

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>SRPK2_MOUSE (O54781) Serine/threonine-protein kinase SRPK2 (EC 2.7.11.1)|
           (Serine/arginine-rich protein-specific kinase 2)
           (SR-protein-specific kinase 2) (SFRS protein kinase 2)
          Length = 681

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 47  LLPPPVMAAPPETTGAPSPPEGEDK 121
           L+PPP    PP     P+PPE E++
Sbjct: 22  LVPPPPPPPPPPPLPDPAPPEPEEE 46

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>NRFA_PENUR (Q92269) Nitrogen regulatory protein nrfA|
          Length = 865

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 59  PVMAAPPETTGAPSPPEGEDKGNAGVEV 142
           P+ AAPP++     PP G  +G AGV+V
Sbjct: 771 PIAAAPPKS----GPPAGVAQGRAGVQV 794

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>SYC_SYNPX (Q7U8C0) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 493

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 167 DFSRAVRAISELAAGEPEPGFPDAEAERLASSITFLRE 280
           D ++ +RA++       EPG P+A+   LA     LRE
Sbjct: 388 DLAKPLRALANRLERGDEPGLPEADIRNLAPRWQLLRE 425

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>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)|
          Length = 3164

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 50  LPPPVMA-APPETTGAPSPPEGEDKG 124
           +P PV+A APP+  G P    GED G
Sbjct: 478 VPEPVLASAPPDPAGPPVAEAGEDDG 503

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>OPSD_TODPA (P31356) Rhodopsin|
          Length = 447

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 53  PPPVMAAPPETTGAPSPPEGED 118
           PPP   APP+     +PP+G D
Sbjct: 420 PPPPQGAPPQGAPPAAPPQGVD 441

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>CAPU_DROME (Q24120) Protein cappuccino|
          Length = 1059

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 53  PPPVMAAPPETTGAPSPPEGEDKGN 127
           PPP+ A+P +TT +P+P     +GN
Sbjct: 552 PPPMSASPSKTTISPAPLPDPAEGN 576

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>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3530

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 38  FSSLLPPPVMAAPPETTGAPSPP 106
           +S+LL PPV   PP +   P+PP
Sbjct: 657 WSALLSPPVPPRPPSSGPPPAPP 679

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>CNTRB_HUMAN (Q8N137) Centrobin (LYST-interacting protein 8)|
          Length = 903

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 41  SSLLPPPVMAAPPETTGAPSPPEGE 115
           S+ LPPP   APP    +P P E E
Sbjct: 569 STTLPPPNPPAPPAGPSSPGPQEPE 593

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>DYNA_XENLA (Q6PCJ1) Dynactin-1|
          Length = 1232

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +2

Query: 2   SSRGSKP*NTPCFSSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAE 166
           SS  S P  TP  + ++P P  A        P P   +++ N   +V   E+  E
Sbjct: 136 SSEPSTPAQTPLAAPIIPSPSSAITSPVAPLPGPGPSKEEENLRAQVKDLEEKLE 190

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>FRAH_ANASP (P46017) Protein fraH|
          Length = 289

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 7/27 (25%)
 Frame = +2

Query: 50  LPPPVMAAPP-------ETTGAPSPPE 109
           LPP  +AAPP       E T AP PPE
Sbjct: 107 LPPTAVAAPPDATPVVVEVTPAPPPPE 133

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>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +2

Query: 29  TPCFSSLLPPPVMAAPPETTGAPSPP 106
           TP   S  PPP    PP    AP PP
Sbjct: 303 TPSLLSNRPPPPAREPPSRGAAPPPP 328

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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 32   PCFSSLLPPPVMAAPPETTGAPSPP 106
            P  ++  PPP     P TT  PSPP
Sbjct: 1644 PPTTTTTPPPTTTPSPPTTTTPSPP 1668



 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 32   PCFSSLLPPPVMAAPPETTGAPSPP 106
            P  ++  PPP     P TT  PSPP
Sbjct: 1565 PPTTTTTPPPTTTPSPPTTTTPSPP 1589

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>EXPA_DROME (Q07436) Protein expanded|
          Length = 1427

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/66 (25%), Positives = 24/66 (36%)
 Frame = +2

Query: 17   KP*NTPCFSSLLPPPVMAAPPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAIS 196
            KP + PC   + P P+ A PP       PP           +     SA     A  ++S
Sbjct: 817  KPDSPPCSPPVPPAPIPAPPPAIRRRDPPPYSISSKPRPTSLISVSSSAHPAPSAAGSMS 876

Query: 197  ELAAGE 214
             L + E
Sbjct: 877  SLKSEE 882

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>DDEF2_HUMAN (O43150) Development and differentiation-enhancing factor 2 (Pyk2|
           C-terminus-associated protein) (PAP)
           (Paxillin-associated protein with ARFGAP activity 3)
           (PAG3)
          Length = 1006

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +2

Query: 5   SRGSKP*NTPCFSSLLPPPVMAAPPETTGAPSPPEGEDK 121
           S+ SKP   P  S + PPP+   PP       P  G DK
Sbjct: 861 SQPSKP-APPGISQIRPPPLPPQPPSRLPQKKPAPGADK 898

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>FA40A_HUMAN (Q5VSL9) Protein FAM40A|
          Length = 837

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +2

Query: 74  PPETTGAPSPPEGEDKGNAGVEVCCFEQSAEDFSRAVRAISELAAGEPEPGFPDAEAERL 253
           PP    A  PP G  +  AG+        A +F+R  R  SE  +  P+  F  A+ ++ 
Sbjct: 22  PPPPPAAAQPPPGAPRAAAGL---LPGGKAREFNRNQRKDSEGYSESPDLEFEYADTDKW 78

Query: 254 ASSITFL 274
           A+ ++ L
Sbjct: 79  AAELSEL 85

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>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = +2

Query: 20  P*NTPCFSSLLPPPVMAAP---PETTGAPSPP 106
           P + P  SS  PPP ++AP   P TTGAP  P
Sbjct: 111 PGSAPGVSSA-PPPAVSAPPANPPTTGAPPGP 141

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>SP5_HUMAN (Q6BEB4) Transcription factor Sp5|
          Length = 398

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 32  PCFSSLLPPPVMAAPPETTGAPSPPEGED 118
           P +S+LLPPP    PP T    SP    D
Sbjct: 157 PGYSNLLPPPPPPPPPPTCRQLSPNPAPD 185

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>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC|
           3.6.1.-)
          Length = 803

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = +2

Query: 53  PPPVMAAPP---ETTGAPSPPEGEDK--GNAGVEVCCFEQSAEDFSRAVRAISELAAGEP 217
           PP V+A PP   +   AP PPE + K  G    +      S E+  R  R  ++ AA  P
Sbjct: 42  PPEVVAPPPPPEDLPPAPPPPEPKKKKVGWGAKKPAATPLSVEELVRKKRE-ADAAAARP 100

Query: 218 EPGFPDAEAERLA 256
           +     AE ER+A
Sbjct: 101 K-FLSRAERERIA 112

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>PDE3B_RAT (Q63085) cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B)
           (CGI-PDE B) (CGIPDE1)
          Length = 1108

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +2

Query: 26  NTPCFSSLLPPPVMAAPPETTGAPSPPEGEDKG 124
           +TP   S  PPP    PP T  A SPPE    G
Sbjct: 9   DTPAMRSPPPPP----PPATATAASPPESLRNG 37

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>TS101_RAT (Q6IRE4) Tumor susceptibility gene 101 protein|
          Length = 391

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 32  PCFSSLLPPPVMAAPPETTGAPSPPEG 112
           P  S+  PP   A PP T+  PS P G
Sbjct: 145 PTVSASYPPYTAAGPPNTSYLPSMPSG 171


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,666,357
Number of Sequences: 219361
Number of extensions: 609912
Number of successful extensions: 4772
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 3521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4651
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result