ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl44a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
2ref|NM_190679.1| Oryza sativa (japonica cultivar-group), predic... 111 2e-21
3ref|XM_477935.1| Oryza sativa (japonica cultivar-group), mRNA 90 6e-15
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
5dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
7dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
8gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.32
9gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.32
10dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.32
11dbj|AB060598.1| TT virus gene for ORF2, partial cds, clone:SAa-07u 44 0.32
12dbj|AB060597.1| TT virus gene for ORF1, ORF2, ORF3, ORF4, comple... 44 0.32
13gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 42 1.3
14emb|BX927157.1| Corynebacterium glutamicum ATCC 13032, IS finger... 42 1.3
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
16dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 42 1.3
17dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
18dbj|AK109116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
19emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 1.3
20ref|XM_481155.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.0
21ref|XM_465099.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.0
22ref|XM_612552.2| PREDICTED: Bos taurus similar to DEAH (Asp-Glu-... 40 5.0
23gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 5.0
24gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 5.0
25emb|CR683322.2|CNS0FQ7A Tetraodon nigroviridis full-length cDNA 40 5.0
26gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.0
27dbj|AB232122.1| Cercopithecine herpesvirus 16 UL27 gene for glyc... 40 5.0
28dbj|AB232121.1| Cercopithecine herpesvirus 16 UL27 gene for glyc... 40 5.0
29dbj|AB232120.1| Cercopithecine herpesvirus 16 UL27 gene for glyc... 40 5.0
30gb|AC078850.5| Homo sapiens BAC clone RP11-184M15 from 4, comple... 40 5.0
31gb|AC092048.2| Homo sapiens chromosome 3 clone RP11-241P3, compl... 40 5.0
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
33dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
34ref|XM_393227.2| PREDICTED: Apis mellifera similar to GA17495-PA... 40 5.0
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
37gb|AC006060.1| Homo sapiens 3 PAC RPCI4-736H12 (Roswell Park Can... 40 5.0
38dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
39dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
40dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.0
41dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
42dbj|AK119946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
43dbj|AK066972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
44gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 5.0
45gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) ... 40 5.0
46emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4,... 40 5.0
47dbj|AB239443.1| Carassius auratus hsp27 mRNA for heat shock prot... 40 5.0
48gb|U14662.1|BHU14662 Baboon herpesvirus HVP2 gB glycoprotein (UL... 40 5.0 
>dbj|AK120108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O16, full
           insert sequence
          Length = 5030

 Score =  113 bits (57), Expect = 4e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                       
Query: 164 gaggacttctccagagcggtacgcgccatctcggagctcgccgccggcgagcccgagccc 223
           |||| ||||||||||||||| | |||||||||||||||| | ||||| ||||||||||| 
Sbjct: 51  gaggtcttctccagagcggtgcacgccatctcggagctcacagccggggagcccgagccg 110

                                                                       
Query: 224 ggcttccccgacgccgaggcggaacggctcgcctcctcgataacgttcctcagagaatgg 283
             |||||| |||||||| |  || ||||||||||| || ||||| |||||||||||||||
Sbjct: 111 aacttccctgacgccgaagtagagcggctcgcctcttcaataactttcctcagagaatgg 170

                
Query: 284 aggca 288
           |||||
Sbjct: 171 aggca 175
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>ref|NM_190679.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3399

 Score =  111 bits (56), Expect = 2e-21
 Identities = 122/144 (84%)
 Strand = Plus / Plus

                                                                       
Query: 164 gaggacttctccagagcggtacgcgccatctcggagctcgccgccggcgagcccgagccc 223
           |||| ||||||||||||||| | |||||||||||||||| |  |||| |||| |||||| 
Sbjct: 97  gaggtcttctccagagcggtgcacgccatctcggagctcacaaccggggagcacgagccg 156

                                                                       
Query: 224 ggcttccccgacgccgaggcggaacggctcgcctcctcgataacgttcctcagagaatgg 283
             |||||| |||||||| |  || |||||||||||||| ||||| |||||||||||||||
Sbjct: 157 aacttccctgacgccgaagtcgagcggctcgcctcctcaataactttcctcagagaatgg 216

                                   
Query: 284 aggcattttaattatgagccaaaa 307
           ||||| ||   |||||||||||||
Sbjct: 217 aggcacttctcttatgagccaaaa 240



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 65 atggccgcgccgccggagacgacgggcgcgccg 97
          ||||| |||||||||||| ||||||| ||||||
Sbjct: 1  atggcggcgccgccggaggcgacgggggcgccg 33
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>ref|XM_477935.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3447

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 96/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 164 gaggacttctccagagcggtacgcgccatctcggagctcgccgccggcgagcccgagccc 223
           |||| ||||||||||||||| | |||||||||||||||| | ||||| ||||||||||| 
Sbjct: 97  gaggtcttctccagagcggtgcacgccatctcggagctcacagccggggagcccgagccg 156

                                                                
Query: 224 ggcttccccgacgccgaggcggaacggctcgcctcctcgataacgttcctcag 276
             |||||| |||||||| |  || ||||||||||| || ||||| ||||||||
Sbjct: 157 aacttccctgacgccgaagtagagcggctcgcctcttcaataactttcctcag 209
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 96/113 (84%)
 Strand = Plus / Minus

                                                                            
Query: 164      gaggacttctccagagcggtacgcgccatctcggagctcgccgccggcgagcccgagccc 223
                |||| ||||||||||||||| | |||||||||||||||| | ||||| ||||||||||| 
Sbjct: 15691970 gaggtcttctccagagcggtgcacgccatctcggagctcacagccggggagcccgagccg 15691911

                                                                     
Query: 224      ggcttccccgacgccgaggcggaacggctcgcctcctcgataacgttcctcag 276
                  |||||| |||||||| |  || ||||||||||| || ||||| ||||||||
Sbjct: 15691910 aacttccctgacgccgaagtagagcggctcgcctcttcaataactttcctcag 15691858



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                            
Query: 162      cagaggacttctccagagcggtacgcgccatctcggagctcgccgccggcgagcccgagc 221
                |||||| ||||||||||||||| | |||||||||||||||| | ||||| ||||||||||
Sbjct: 15694321 cagaggtcttctccagagcggtgcacgccatctcggagctcacagccggggagcccgagc 15694380

                 
Query: 222      c 222
                |
Sbjct: 15694381 c 15694381



 Score = 46.1 bits (23), Expect = 0.081
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 57       cgccggtgatggccgcgccgccggagacgacgggcgcgc 95
                ||||||||||||| |||| ||||||| ||||||| ||||
Sbjct: 15692074 cgccggtgatggcggcgctgccggaggcgacgggggcgc 15692036



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 57       cgccggtgatggccgcgccgccggagacgacgggcgcgccg 97
                ||||||||||||| | |||||||||| ||||| | ||||||
Sbjct: 15694233 cgccggtgatggcggtgccgccggaggcgacgagggcgccg 15694273
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>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0075N02
          Length = 186945

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 96/113 (84%)
 Strand = Plus / Minus

                                                                         
Query: 164   gaggacttctccagagcggtacgcgccatctcggagctcgccgccggcgagcccgagccc 223
             |||| ||||||||||||||| | |||||||||||||||| | ||||| ||||||||||| 
Sbjct: 89827 gaggtcttctccagagcggtgcacgccatctcggagctcacagccggggagcccgagccg 89768

                                                                  
Query: 224   ggcttccccgacgccgaggcggaacggctcgcctcctcgataacgttcctcag 276
               |||||| |||||||| |  || ||||||||||| || ||||| ||||||||
Sbjct: 89767 aacttccctgacgccgaagtagagcggctcgcctcttcaataactttcctcag 89715



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                         
Query: 162   cagaggacttctccagagcggtacgcgccatctcggagctcgccgccggcgagcccgagc 221
             |||||| ||||||||||||||| | |||||||||||||||| | ||||| ||||||||||
Sbjct: 92178 cagaggtcttctccagagcggtgcacgccatctcggagctcacagccggggagcccgagc 92237

              
Query: 222   c 222
             |
Sbjct: 92238 c 92238



 Score = 46.1 bits (23), Expect = 0.081
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 57    cgccggtgatggccgcgccgccggagacgacgggcgcgc 95
             ||||||||||||| |||| ||||||| ||||||| ||||
Sbjct: 89931 cgccggtgatggcggcgctgccggaggcgacgggggcgc 89893



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 57    cgccggtgatggccgcgccgccggagacgacgggcgcgccg 97
             ||||||||||||| | |||||||||| ||||| | ||||||
Sbjct: 92090 cgccggtgatggcggtgccgccggaggcgacgagggcgccg 92130
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 95/113 (84%)
 Strand = Plus / Minus

                                                                            
Query: 164      gaggacttctccagagcggtacgcgccatctcggagctcgccgccggcgagcccgagccc 223
                |||| ||||||||||||||| | |||||||||||||||| |  |||| |||| |||||| 
Sbjct: 37082056 gaggtcttctccagagcggtgcacgccatctcggagctcacaaccggggagcacgagccg 37081997

                                                                     
Query: 224      ggcttccccgacgccgaggcggaacggctcgcctcctcgataacgttcctcag 276
                  |||||| |||||||| |  || |||||||||||||| ||||| ||||||||
Sbjct: 37081996 aacttccctgacgccgaagtcgagcggctcgcctcctcaataactttcctcag 37081944



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 57       cgccggtgatggccgcgccgccggagacgacgggcgcgccg 97
                |||||| |||||| |||||||||||| ||||||| ||||||
Sbjct: 37082160 cgccggcgatggcggcgccgccggaggcgacgggggcgccg 37082120
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>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0683F02
          Length = 153388

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 95/113 (84%)
 Strand = Plus / Minus

                                                                         
Query: 164   gaggacttctccagagcggtacgcgccatctcggagctcgccgccggcgagcccgagccc 223
             |||| ||||||||||||||| | |||||||||||||||| |  |||| |||| |||||| 
Sbjct: 83197 gaggtcttctccagagcggtgcacgccatctcggagctcacaaccggggagcacgagccg 83138

                                                                  
Query: 224   ggcttccccgacgccgaggcggaacggctcgcctcctcgataacgttcctcag 276
               |||||| |||||||| |  || |||||||||||||| ||||| ||||||||
Sbjct: 83137 aacttccctgacgccgaagtcgagcggctcgcctcctcaataactttcctcag 83085



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 57    cgccggtgatggccgcgccgccggagacgacgggcgcgccg 97
             |||||| |||||| |||||||||||| ||||||| ||||||
Sbjct: 83301 cgccggcgatggcggcgccgccggaggcgacgggggcgccg 83261
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 55      cccgccggtgatggccgcgccg 76
               ||||||||||||||||||||||
Sbjct: 4337254 cccgccggtgatggccgcgccg 4337275



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 56      ccgccggtgatggccgcgccgccg 79
               ||||||| ||||||||||||||||
Sbjct: 1688518 ccgccggagatggccgcgccgccg 1688495
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 89      ggcgcgccgtccccgccggaag 110
               ||||||||||||||||||||||
Sbjct: 2730128 ggcgcgccgtccccgccggaag 2730149
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 69      ccgcgccgccggagacgacgggcgcgccgtccccgccg 106
               ||||||||||||||||||||| | || ||||| |||||
Sbjct: 2675272 ccgcgccgccggagacgacggccccggcgtccgcgccg 2675309
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>dbj|AB060598.1| TT virus gene for ORF2, partial cds, clone:SAa-07u
          Length = 600

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 56  ccgccggtgatggccgcgccgccggagacg 85
           |||||| || ||||||||||||||||||||
Sbjct: 537 ccgccgctggtggccgcgccgccggagacg 566
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>dbj|AB060597.1| TT virus gene for ORF1, ORF2, ORF3, ORF4, complete cds,
           clone:SAa-01
          Length = 3246

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 56  ccgccggtgatggccgcgccgccggagacg 85
           |||||| || ||||||||||||||||||||
Sbjct: 537 ccgccgctggtggccgcgccgccggagacg 566
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 227    ttccccgacgccgaggcggaa 247
              |||||||||||||||||||||
Sbjct: 468189 ttccccgacgccgaggcggaa 468169
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>emb|BX927157.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
             complete genome; segment 10/10
          Length = 140057

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 143   tgctgcttcgagcaatctgcagagg 167
             |||||||||||||||||||| ||||
Sbjct: 88105 tgctgcttcgagcaatctgctgagg 88129
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 202     cgccgccggcgagcccgagcc 222
               |||||||||||||||||||||
Sbjct: 4297865 cgccgccggcgagcccgagcc 4297845
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 143     tgctgcttcgagcaatctgcagagg 167
               |||||||||||||||||||| ||||
Sbjct: 3257449 tgctgcttcgagcaatctgctgagg 3257473
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>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0554A06
          Length = 165311

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 202    cgccgccggcgagcccgagcc 222
              |||||||||||||||||||||
Sbjct: 143086 cgccgccggcgagcccgagcc 143066
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>dbj|AK109116.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C07, full
           insert sequence
          Length = 1183

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 202 cgccgccggcgagcccgagcc 222
           |||||||||||||||||||||
Sbjct: 341 cgccgccggcgagcccgagcc 321
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 206    gccggcgagcccgagcccggc 226
              |||||||||||||||||||||
Sbjct: 625196 gccggcgagcccgagcccggc 625176
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>ref|XM_481155.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 819

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 56  ccgccggtgatggccgcgccgccg 79
           |||||||||| |||||||||||||
Sbjct: 314 ccgccggtgacggccgcgccgccg 337
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>ref|XM_465099.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1822

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 130 gggcgtcgaggtctgctgcttcga 153
           ||||| ||||||||||||||||||
Sbjct: 367 gggcgccgaggtctgctgcttcga 390
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>ref|XM_612552.2| PREDICTED: Bos taurus similar to DEAH (Asp-Glu-Ala-His) box
           polypeptide 40 (LOC533222), partial mRNA
          Length = 1853

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 gagcccggcttccccgacgccgag 241
           ||||||| ||||||||||||||||
Sbjct: 276 gagcccgccttccccgacgccgag 253
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 56      ccgccggtgatggccgcgccgccg 79
               ||||||||||||||||||| ||||
Sbjct: 3325191 ccgccggtgatggccgcgcggccg 3325168
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 135     tcgaggtctgctgcttcgag 154
               ||||||||||||||||||||
Sbjct: 2715828 tcgaggtctgctgcttcgag 2715809
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>emb|CR683322.2|CNS0FQ7A Tetraodon nigroviridis full-length cDNA
          Length = 690

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 ttatgagccaaaaggtgtaa 314
           ||||||||||||||||||||
Sbjct: 461 ttatgagccaaaaggtgtaa 480
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 201     tcgccgccggcgagcccgagcccg 224
               |||||||||||||||| |||||||
Sbjct: 6235136 tcgccgccggcgagccggagcccg 6235159
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>dbj|AB232122.1| Cercopithecine herpesvirus 16 UL27 gene for glycoprotein B, complete
            cds, isolate:OU2-5
          Length = 2685

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   cgggcgcgccgtccccgccg 106
            ||||||||||||||||||||
Sbjct: 2467 cgggcgcgccgtccccgccg 2448
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>dbj|AB232121.1| Cercopithecine herpesvirus 16 UL27 gene for glycoprotein B, complete
            cds, isolate:OU1-76
          Length = 2676

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   cgggcgcgccgtccccgccg 106
            ||||||||||||||||||||
Sbjct: 2458 cgggcgcgccgtccccgccg 2439
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>dbj|AB232120.1| Cercopithecine herpesvirus 16 UL27 gene for glycoprotein B, complete
            cds, isolate:A951
          Length = 2685

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   cgggcgcgccgtccccgccg 106
            ||||||||||||||||||||
Sbjct: 2467 cgggcgcgccgtccccgccg 2448
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>gb|AC078850.5| Homo sapiens BAC clone RP11-184M15 from 4, complete sequence
          Length = 180194

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    cattttaattatgagccaaa 306
              ||||||||||||||||||||
Sbjct: 118271 cattttaattatgagccaaa 118290
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>gb|AC092048.2| Homo sapiens chromosome 3 clone RP11-241P3, complete sequence
          Length = 155663

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   cagaggacttctccagagcggtac 185
             ||||||||||||||||||| ||||
Sbjct: 53392 cagaggacttctccagagctgtac 53415
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 198      agctcgccgccggcgagcccgagcccgg 225
                ||||||| | ||||||||||||||||||
Sbjct: 29770376 agctcgcggacggcgagcccgagcccgg 29770403
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 201      tcgccgccggcgagcccgag 220
                ||||||||||||||||||||
Sbjct: 13222641 tcgccgccggcgagcccgag 13222622
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>ref|XM_393227.2| PREDICTED: Apis mellifera similar to GA17495-PA (LOC409729), mRNA
          Length = 7938

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 199  gctcgccgccggcgagcccgagcccggc 226
            |||| ||| |||||||||||||||||||
Sbjct: 2066 gctccccggcggcgagcccgagcccggc 2093
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 56       ccgccggtgatggccgcgccgccg 79
                |||||||||| |||||||||||||
Sbjct: 10263975 ccgccggtgacggccgcgccgccg 10263952
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 130      gggcgtcgaggtctgctgcttcga 153
                ||||| ||||||||||||||||||
Sbjct: 11486586 gggcgccgaggtctgctgcttcga 11486563
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>gb|AC006060.1| Homo sapiens 3 PAC RPCI4-736H12 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 135039

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   cagaggacttctccagagcggtac 185
             ||||||||||||||||||| ||||
Sbjct: 12640 cagaggacttctccagagctgtac 12663
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>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1540_G08
          Length = 126263

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    ccgccggtgatggccgcgccgccg 79
             |||||||||| |||||||||||||
Sbjct: 69998 ccgccggtgacggccgcgccgccg 69975
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>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0030M21
          Length = 155970

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   gggcgtcgaggtctgctgcttcga 153
             ||||| ||||||||||||||||||
Sbjct: 69078 gggcgccgaggtctgctgcttcga 69055
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 199     gctcgccgccggcgagcccg 218
               ||||||||||||||||||||
Sbjct: 7577187 gctcgccgccggcgagcccg 7577206



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 57    cgccggtgatggccgcgccgccgg 80
             ||||||||| ||||||||||||||
Sbjct: 88180 cgccggtgaaggccgcgccgccgg 88157
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>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0055N01
          Length = 154783

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   tcgccgccggcgagcccgag 220
             ||||||||||||||||||||
Sbjct: 44075 tcgccgccggcgagcccgag 44056
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>dbj|AK119946.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-B12, full
           insert sequence
          Length = 1163

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 56  ccgccggtgatggccgcgccgccg 79
           |||||||||| |||||||||||||
Sbjct: 422 ccgccggtgacggccgcgccgccg 445
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>dbj|AK066972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089I06, full
           insert sequence
          Length = 1821

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 130 gggcgtcgaggtctgctgcttcga 153
           ||||| ||||||||||||||||||
Sbjct: 366 gggcgccgaggtctgctgcttcga 389
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    cgggcgcgccgtccccgccg 106
             ||||||||||||||||||||
Sbjct: 53664 cgggcgcgccgtccccgccg 53683
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>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds;
             and unknown gene
          Length = 18555

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   ctcggagctcgccgccggcg 212
             ||||||||||||||||||||
Sbjct: 13705 ctcggagctcgccgccggcg 13686
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>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06,
             complete sequence
          Length = 178552

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 198   agctcgccgccggcgagcccgagcccgg 225
             ||||||| | ||||||||||||||||||
Sbjct: 51302 agctcgcggacggcgagcccgagcccgg 51329
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>dbj|AB239443.1| Carassius auratus hsp27 mRNA for heat shock protein 27, complete
           cds
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 tcctcagagaatggaggcat 289
           ||||||||||||||||||||
Sbjct: 166 tcctcagagaatggaggcat 147
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>gb|U14662.1|BHU14662 Baboon herpesvirus HVP2 gB glycoprotein (UL27) gene, complete cds
          Length = 2817

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   cgggcgcgccgtccccgccg 106
            ||||||||||||||||||||
Sbjct: 2590 cgggcgcgccgtccccgccg 2571


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,746,310
Number of Sequences: 3902068
Number of extensions: 2746310
Number of successful extensions: 59464
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58033
Number of HSP's gapped (non-prelim): 1431
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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