ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl44a09 |
|---|---|
| Clone Library Name | barley_pub |
>ENPL_HORVU (P36183) Endoplasmin homolog precursor (GRP94 homolog)| Length = 809 Score = 154 bits (389), Expect = 5e-38 Identities = 79/89 (88%), Positives = 79/89 (88%) Frame = +3 Query: 51 MRKWALSCAXXXXXXXXXXPDPAKKLQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEV 230 MRKWALSCA PDPAKKLQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEV Sbjct: 1 MRKWALSCALLLVLLLTTLPDPAKKLQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEV 60 Query: 231 VQRESESISRKTLRNSAEKFEFQAEVSRL 317 VQRESESISRKTLRNSAEKFEFQAEVSRL Sbjct: 61 VQRESESISRKTLRNSAEKFEFQAEVSRL 89
>ENPL_ARATH (Q9STX5) Endoplasmin homolog precursor (GRP94 homolog) (Protein| SHEPHERD) (HSP90-like protein 7) Length = 823 Score = 97.8 bits (242), Expect = 6e-21 Identities = 55/89 (61%), Positives = 63/89 (70%) Frame = +3 Query: 51 MRKWALSCAXXXXXXXXXXPDPAKKLQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEV 230 MRK L PD +KL NAEESSD+V D PKVEEK+G GLSTDS+V Sbjct: 1 MRKRTLVSVLFLFSLLFLLPDQGRKLHANAEESSDDVTDPPKVEEKIGG-HGGLSTDSDV 59 Query: 231 VQRESESISRKTLRNSAEKFEFQAEVSRL 317 V RESES+S+KTLR++AEKFEFQAEVSRL Sbjct: 60 VHRESESMSKKTLRSNAEKFEFQAEVSRL 88
>ENPL_CATRO (P35016) Endoplasmin homolog precursor (GRP94 homolog)| Length = 817 Score = 91.7 bits (226), Expect = 4e-19 Identities = 47/89 (52%), Positives = 59/89 (66%) Frame = +3 Query: 51 MRKWALSCAXXXXXXXXXXPDPAKKLQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEV 230 MRKW + +K+ NAE SD D PKVE+K+GAVP+GLSTDS+V Sbjct: 1 MRKWTVPSVLFLLCPSLSSSCQGRKIHANAEADSDAPVDPPKVEDKIGAVPNGLSTDSDV 60 Query: 231 VQRESESISRKTLRNSAEKFEFQAEVSRL 317 +RE+ES+S + LR+ AEKFEFQAEVSRL Sbjct: 61 AKREAESMSMRNLRSDAEKFEFQAEVSRL 89
>ENPL_CHICK (P08110) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (Heat shock 108 kDa protein) (HSP108) (HSP 108) (Transferrin-binding protein) Length = 795 Score = 48.9 bits (115), Expect = 3e-06 Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 8/72 (11%) Frame = +3 Query: 126 LQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISR--------KTLRNSA 281 L + A +++EV VEE LG G TD EVVQRE E+I K +R + Sbjct: 13 LLLAASVTAEEVDVDATVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIKEIREKS 72 Query: 282 EKFEFQAEVSRL 317 EKF FQAEV+R+ Sbjct: 73 EKFAFQAEVNRM 84
>ENPL_HUMAN (P14625) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) (gp96 homolog) (Tumor rejection antigen 1) Length = 803 Score = 48.5 bits (114), Expect = 4e-06 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 8/72 (11%) Frame = +3 Query: 126 LQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISR--------KTLRNSA 281 L + + DEV VEE LG G TD EVVQRE E+I + LR + Sbjct: 14 LTFGSVRADDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKS 73 Query: 282 EKFEFQAEVSRL 317 EKF FQAEV+R+ Sbjct: 74 EKFAFQAEVNRM 85
>ENPL_PONPY (Q5R6F7) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) Length = 804 Score = 48.5 bits (114), Expect = 4e-06 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 8/72 (11%) Frame = +3 Query: 126 LQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISR--------KTLRNSA 281 L + + DEV VEE LG G TD EVVQRE E+I + LR + Sbjct: 14 LTFGSVRADDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKS 73 Query: 282 EKFEFQAEVSRL 317 EKF FQAEV+R+ Sbjct: 74 EKFAFQAEVNRM 85
>ENPL_PIG (Q29092) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) (gp96 homolog) (98 kDa protein kinase) (PPK 98) (ppk98) Length = 804 Score = 48.5 bits (114), Expect = 4e-06 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 8/72 (11%) Frame = +3 Query: 126 LQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISR--------KTLRNSA 281 L + + DEV VEE LG G TD EVVQRE E+I + LR + Sbjct: 14 LTFGSVRAEDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKS 73 Query: 282 EKFEFQAEVSRL 317 EKF FQAEV+R+ Sbjct: 74 EKFAFQAEVNRM 85
>ENPL_MACFA (Q4R520) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) Length = 804 Score = 48.5 bits (114), Expect = 4e-06 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 8/72 (11%) Frame = +3 Query: 126 LQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISR--------KTLRNSA 281 L + + DEV VEE LG G TD EVVQRE E+I + LR + Sbjct: 14 LTFGSVRADDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKS 73 Query: 282 EKFEFQAEVSRL 317 EKF FQAEV+R+ Sbjct: 74 EKFAFQAEVNRM 85
>ENPL_CANFA (P41148) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) Length = 804 Score = 48.5 bits (114), Expect = 4e-06 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 8/72 (11%) Frame = +3 Query: 126 LQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISR--------KTLRNSA 281 L + + DEV VEE LG G TD EVVQRE E+I + LR + Sbjct: 14 LTFGSVRADDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKS 73 Query: 282 EKFEFQAEVSRL 317 EKF FQAEV+R+ Sbjct: 74 EKFAFQAEVNRM 85
>ENPL_BOVIN (Q95M18) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) Length = 804 Score = 48.5 bits (114), Expect = 4e-06 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 8/72 (11%) Frame = +3 Query: 126 LQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISR--------KTLRNSA 281 L + + DEV VEE LG G TD EVVQRE E+I + LR + Sbjct: 14 LTFGSVRADDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKS 73 Query: 282 EKFEFQAEVSRL 317 EKF FQAEV+R+ Sbjct: 74 EKFAFQAEVNRM 85
>ENPL_MOUSE (P08113) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) (ERP99) (Polymorphic tumor rejection antigen 1) (Tumor rejection antigen gp96) Length = 802 Score = 48.1 bits (113), Expect = 5e-06 Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 8/65 (12%) Frame = +3 Query: 147 SSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISR--------KTLRNSAEKFEFQA 302 + DEV VEE LG G TD EVVQRE E+I + LR +EKF FQA Sbjct: 21 ADDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQA 80 Query: 303 EVSRL 317 EV+R+ Sbjct: 81 EVNRM 85
>SLK_MOUSE (O54988) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)| (STE20-like kinase) (STE20-related serine/threonine-protein kinase) (STE20-related kinase) (mSLK) (Serine/threonine-protein kinase 2) (STE20-related kinase SMAK) (Etk4) Length = 1233 Score = 34.3 bits (77), Expect = 0.081 Identities = 17/36 (47%), Positives = 24/36 (66%) Frame = -2 Query: 304 SAWNSNFSAEFLRVFLEIDSDSLWTTSESVDKPWGT 197 S W+SNF +FLR LE + D+ WTTS+ + P+ T Sbjct: 259 SKWSSNFK-DFLRKCLEKNVDARWTTSQLLQHPFVT 293
>SLK_HUMAN (Q9H2G2) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)| (STE20-like kinase) (STE20-related serine/threonine-protein kinase) (STE20-related kinase) (hSLK) (Serine/threonine-protein kinase 2) (CTCL tumor antigen se20-9) Length = 1235 Score = 33.1 bits (74), Expect = 0.18 Identities = 16/36 (44%), Positives = 24/36 (66%) Frame = -2 Query: 304 SAWNSNFSAEFLRVFLEIDSDSLWTTSESVDKPWGT 197 S W+SNF +FL+ LE + D+ WTTS+ + P+ T Sbjct: 259 SRWSSNFK-DFLKKCLEKNVDARWTTSQLLQHPFVT 293
>SLK_RAT (O08815) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)| (STE20-like kinase) (STE20-related serine/threonine-protein kinase) (STE20-related kinase) Length = 1206 Score = 33.1 bits (74), Expect = 0.18 Identities = 16/36 (44%), Positives = 24/36 (66%) Frame = -2 Query: 304 SAWNSNFSAEFLRVFLEIDSDSLWTTSESVDKPWGT 197 S W+SNF +FL+ LE + D+ WTTS+ + P+ T Sbjct: 259 SRWSSNFK-DFLKKCLEKNVDARWTTSQLLQHPFVT 293
>SLK_CAVPO (O55092) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)| (STE20-like kinase) (STE20-related serine/threonine-protein kinase) (STE20-related kinase) Length = 1231 Score = 33.1 bits (74), Expect = 0.18 Identities = 16/36 (44%), Positives = 24/36 (66%) Frame = -2 Query: 304 SAWNSNFSAEFLRVFLEIDSDSLWTTSESVDKPWGT 197 S W+SNF +FL+ LE + D+ WTTS+ + P+ T Sbjct: 259 SRWSSNFK-DFLKKCLEKNVDARWTTSQLLQHPFVT 293
>SEY1_YARLI (Q6C3B0) Protein SEY1| Length = 938 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +3 Query: 171 PKVEEKLGAVPHGLSTDSEVVQRESESISRKTLRNSAEK 287 P E VP GL ++ + V+RE + + RK + + AEK Sbjct: 87 PAPEPIAAPVPEGLKSEHKPVEREHKPVERKPVSSPAEK 125
>OPTN_MACMU (Q861Q8) Optineurin| Length = 571 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 204 HGLSTDSEVVQRESESISRKTLRNSAEKFE 293 H L T E+ ++ESE + R L+ +EK E Sbjct: 396 HALKTIEELTRKESEKVDRAVLKELSEKLE 425
>OPTN_MACFA (Q95KA2) Optineurin| Length = 571 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 204 HGLSTDSEVVQRESESISRKTLRNSAEKFE 293 H L T E+ ++ESE + R L+ +EK E Sbjct: 396 HALKTIEELTRKESEKVDRAVLKELSEKLE 425
>IF2C_ARATH (Q9SHI1) Translation initiation factor IF-2, chloroplast precursor| Length = 1016 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +3 Query: 117 AKKLQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESIS 257 AKK Q EE D++ D P V +G V HG +T + +++ + S Sbjct: 473 AKKRQTFDEEDLDKLEDRPPVITIMGHVDHGKTTLLDYIRKSKVAAS 519
>FTSY_BUCAI (P57137) Cell division protein ftsY homolog| Length = 378 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/59 (30%), Positives = 33/59 (55%) Frame = +3 Query: 120 KKLQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISRKTLRNSAEKFEF 296 K Q+ + DEV F ++EEK+ G++T + ++ + ++R+ L+NS EK F Sbjct: 97 KIYQIFLSKKIDEVL-FEELEEKMLLADIGINTTNRIISNLIKDVNREDLKNS-EKLYF 153
>TRMD_IDILO (Q5QUV0) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 252 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 146 EQRRGWRFSQGRGEAWGRAPWLVHRL 223 E+ R WR Q G+ W + P L+H L Sbjct: 206 EKIRRWRLQQSLGKTWLQRPELIHSL 231
>YHJ1_SCHPO (Q9C0V8) Probable transporter PB10D8.01| Length = 552 Score = 28.1 bits (61), Expect = 5.8 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = +3 Query: 108 PDPAKKLQVNAEESSDEVGDFPK--VEEKLGAVPHGLSTDSEVVQRESESISRKTLRNSA 281 P P+ Q+N E+SSD D PK V+++ G PH +++ +S S S + N+ Sbjct: 2 PQPSYADQINVEDSSDYEKD-PKEYVDKEKGYFPHVITSHIS----KSSSQSHPDVSNAV 56 Query: 282 --EKFEFQAEVSRL 317 E F F E L Sbjct: 57 LDETFSFMQEAKDL 70
>AROC_SYMTH (Q67N08) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 391 Score = 27.7 bits (60), Expect = 7.6 Identities = 19/42 (45%), Positives = 23/42 (54%) Frame = +2 Query: 182 GEAWGRAPWLVHRLRGCPEGVRVDLEEDPQELGREV*VPGRG 307 GE+ GRA LV + G P GV VDL ++L R GRG Sbjct: 7 GESHGRA--LVTIVEGLPAGVPVDLAAIDRDLARRQSGYGRG 46
>MURG_CHLCH (Q3ANV3) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 362 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = -1 Query: 251 RLGLPLDNLGVGGQAMGHGPKLLLYLGKIANLVAALLGIDLELL 120 RLG L + V G G PKLL+ +I A LGI ++LL Sbjct: 49 RLGYKLHLVSVRGLKRGFSPKLLIENLRILFDFARSLGITIQLL 92
>CKX4_ARATH (Q9FUJ2) Cytokinin dehydrogenase 4 precursor (EC 1.5.99.12)| (Cytokinin oxidase 4) (CKO 4) (AtCKX4) Length = 524 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 248 LGLPLDNLGVGGQAMGHGPKL 186 +G L N G+GGQ HGP++ Sbjct: 179 VGGTLSNAGIGGQTFRHGPQI 199
>SH3BG_HUMAN (P55822) SH3 domain-binding glutamic acid-rich protein (SH3BGR| protein) (21-glutamic acid-rich protein) (21-GARP) Length = 239 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +3 Query: 141 EESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISRKTLRNSAEKFEFQAE 305 +E S++VG+ P+ +EK + E E+E I+ + AE+ E AE Sbjct: 182 KEGSEDVGNLPEAQEK-------NEEEGETATEETEEIAMEGAEGEAEEEEETAE 229
>YMN1_YEAST (Q03102) Hypothetical 40.0 kDa protein in COX14-COS3 intergenic| region Length = 365 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = +3 Query: 120 KKLQVNAEESSDEVGDFPKVEEKLGA-VPHG 209 K+L V +D + DFPK +KLG+ V HG Sbjct: 290 KRLVVKGVLVTDNIDDFPKALDKLGSLVKHG 320
>MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemotaxis protein)| Length = 657 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/70 (24%), Positives = 35/70 (50%) Frame = +3 Query: 108 PDPAKKLQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISRKTLRNSAEK 287 P +KL+ ++ + +G + + + A GLST ++ + S+ +SR+T + +A Sbjct: 327 PGDYRKLK---DDFNAAMGSLQETMKVIAASTDGLSTGADEIAHASDDLSRRTEQQAASL 383 Query: 288 FEFQAEVSRL 317 E A + L Sbjct: 384 EETAAALDEL 393 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,072,146 Number of Sequences: 219361 Number of extensions: 655256 Number of successful extensions: 2574 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2522 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2564 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
