Clone Information

BLAST Search Result

Clone Name	bastl44a04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CWPX_ARATH (P47925) Putative cell wall protein precursor	45	4e-05
2	SAS_DROME (Q04164) Putative epidermal cell surface receptor prec...	33	0.16
3	ADP2_MYCGA (Q9REM8) Adhesin P1 precursor (Cytadhesin P1) (Attach...	33	0.21
4	PUTX_EMENI (P18696) Proline-specific permease (Proline transport...	32	0.47
5	ADP1_MYCGA (Q49379) Adhesin P1 precursor (Cytadhesin P1) (Attach...	30	1.0
6	AMYB_SOYBN (P10538) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-gluca...	29	2.3
7	JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylatio...	29	3.0
8	PHAAB_RHIME (Q52978) Probable K(+)/H(+) antiporter subunit A/B (...	29	3.0
9	COLI_MACNE (P01201) Corticotropin-lipotropin precursor (Pro-opio...	29	3.0
10	EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-...	29	3.0
11	PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing pr...	29	3.0
12	UXUA_BACFR (Q650A0) Mannonate dehydratase (EC 4.2.1.8) (D-mannon...	29	3.0
13	UXUA_BACFN (Q5LIV6) Mannonate dehydratase (EC 4.2.1.8) (D-mannon...	29	3.0
14	KI13A_MOUSE (Q9EQW7) Kinesin-like protein KIF13A	28	4.0
15	ACVS1_PENCH (P19787) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-...	28	4.0
16	YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon ...	28	5.2
17	LZTS2_MOUSE (Q91YU6) Leucine zipper putative tumor suppressor 2	28	5.2
18	KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like p...	28	5.2
19	Y3466_MYCTU (O06331) Hypothetical protein Rv3466/MT3572	28	6.8
20	Y1614_MYCBO (P0A5F2) Hypothetical protein Mb1614c	28	6.8
21	Y1588_MYCTU (P0A5F1) Hypothetical protein Rv1588c/MT1623	28	6.8
22	GSC_DROME (P54366) Homeobox protein goosecoid	28	6.8
23	OPLA_BOVIN (Q75WB5) 5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolina...	28	6.8
24	H3_ENCAL (P08903) Histone H3	28	6.8
25	H34_STYLE (P81198) Histone H3-4 (Fragment)	28	6.8
26	LZTS2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2 ...	28	6.8
27	BRO1_ASPFU (Q4X0Z5) Vacuolar protein-sorting protein bro1 (BRO d...	28	6.8
28	PALST_EUGGR (P84739) Photoactivated adenylate cyclase alpha-subu...	28	6.8
29	TIG_STRP8 (Q8NZF6) Trigger factor (TF)	27	8.8
30	TIG_STRP6 (Q5XA08) Trigger factor (TF)	27	8.8
31	TIG_STRP3 (Q879L7) Trigger factor (TF)	27	8.8
32	TIG_STRP1 (P0C0E1) Trigger factor (TF)	27	8.8
33	MSL5_YEAST (Q12186) Branchpoint-bridging protein MSL5 (MUD synth...	27	8.8
34	ILVD_GLUOX (Q5FN26) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)	27	8.8
35	VE2_HPV03 (P36778) Regulatory protein E2	27	8.8
36	Y6023_STRCO (O69853) Exopolysaccharide phosphotransferase SCO602...	27	8.8
37	CLPP_PINCO (P36387) ATP-dependent Clp protease proteolytic subun...	27	8.8
38	BINCA_HUMAN (Q96LW7) Bcl10-interacting CARD protein (BinCARD)	27	8.8
39	KI67_HUMAN (P46013) Antigen KI-67	27	8.8
40	CHVI_RHISN (P50351) Transcriptional regulatory protein chvI	27	8.8
41	KI13B_HUMAN (Q9NQT8) Kinesin-like protein KIF13B (Kinesin-like p...	27	8.8
42	RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4	27	8.8
43	YPR2_ECOLI (P10018) Hypothetical 14.7 kDa protein (ORF 2)	27	8.8

>CWPX_ARATH (P47925) Putative cell wall protein precursor|
          Length = 140

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 35/91 (38%), Positives = 42/91 (46%), Gaps = 19/91 (20%)
 Frame = +2

Query: 197 RHLPAEKPAEDVVKRPDTF----QEGTVLIPGIGRYELGTH-------YIPDIGG--LDH 337
           RH+P      DV K PD       + T+LIPG+GR+ L          Y P  G      
Sbjct: 29  RHVPKSPKTTDV-KHPDFLVTIEPKPTILIPGVGRFLLPPKCKKPFYPYNPVTGAPLTGG 87

Query: 338 SIPAAANGQF------IPGADDTWVPNPGFE 412
            IP+   GQ       +PG DDT VPNPGFE
Sbjct: 88  GIPSYNGGQGAGPHTQLPGGDDTLVPNPGFE 118

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>SAS_DROME (Q04164) Putative epidermal cell surface receptor precursor (Stranded|
            at second protein)
          Length = 1693

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 298  GHPLHPGHRRARPQHPGRRQRAVHPRGRRHLGAQPRL 408
            GHP+HPGH      HPG+ Q+  H     +LG Q R+
Sbjct: 1107 GHPVHPGHGGPPRIHPGQTQKDNH-----NLGPQVRI 1138



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 250  VPGGDGADPGDREVRTGHP-LHPGHRRARPQHPGRRQRAVH 369
            VPGG    P  ++ ++  P LHP  ++   QHPG     VH
Sbjct: 1149 VPGGPPPPPPHQQHQSLTPQLHPQQQQISQQHPGHYVPIVH 1189

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>ADP2_MYCGA (Q9REM8) Adhesin P1 precursor (Cytadhesin P1) (Attachment protein)|
           (Adherence protein A)
          Length = 1122

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +2

Query: 245 DTFQEGTVLIPGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDTWVPNPG 406
           D  + G  L P     ++G H++P +     S P  ANG    G+  TW  N G
Sbjct: 461 DATRNGLALAPASLGQDVGYHFVPRLAVGGVSSPRGANGNIFLGSAITWGTNGG 514

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>PUTX_EMENI (P18696) Proline-specific permease (Proline transport protein)|
          Length = 550

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 23/63 (36%), Positives = 34/63 (53%)
 Frame = -2

Query: 393 TQVSSAPGMNCPLAAAGMLWSSPPMSGM*WVPSSYLPIPGISTVPSWNVSGRFTTSSAGF 214
           TQ   AP +   +  A ++W    + G     ++YLPI G+S VP   + GRFT  S GF
Sbjct: 68  TQTGPAPLLMSYIVMASIVWFVMNVLGE---MTTYLPIRGVS-VPY--LIGRFTEPSIGF 121

Query: 213 SAG 205
           ++G
Sbjct: 122 ASG 124

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>ADP1_MYCGA (Q49379) Adhesin P1 precursor (Cytadhesin P1) (Attachment protein)|
          Length = 1122

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +2

Query: 245 DTFQEGTVLI-PGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDTWVPNPG 406
           D  + G  L  P +G+ ++G H++P +     S P  ANG    G+  TW  N G
Sbjct: 461 DATRNGLALAAPALGQ-DVGYHFVPRLAVGGVSSPRGANGNIFLGSAITWGTNGG 514

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>AMYB_SOYBN (P10538) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan|
           maltohydrolase)
          Length = 495

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -1

Query: 277 RDQHRPLLERVRSLHHVLRGFLCRQMARRRALPGEARRGHQRREDQ 140
           RD +RP+  R+ S HH +  F C +M R    P +A+ G Q    Q
Sbjct: 322 RDGYRPIA-RMLSRHHAILNFTCLEM-RDSEQPSDAKSGPQELVQQ 365

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>JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylation protein 2A|
           (EC 1.14.11.-) (Jumonji domain-containing protein 1A)
          Length = 1323

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 408 KPGLGTQVSSAPGMNCPLAAAGMLWSSPPMSGM*WVPSSYLPIPGISTVPSWNVS 244
           KP LGT V  +  +  P+A  G   S P  S     P+S  P+  ++ + S NV+
Sbjct: 779 KPTLGTMVQQSSPVLEPVAVCGEAASKPASSVKPTCPTSTSPLNWLADLTSGNVN 833

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>PHAAB_RHIME (Q52978) Probable K(+)/H(+) antiporter subunit A/B (pH adaptation|
           potassium efflux system protein A/B) (Pha system subunit
           A/B)
          Length = 999

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 248 TFQEGTVLIPGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDTWVP 397
           TF+    +  GI  +E GT  I  +GGL H +P  A    +  A    VP
Sbjct: 363 TFKASLFMAAGIIDHESGTRDIRRLGGLFHFMPITATLAMVASAAMAGVP 412

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>COLI_MACNE (P01201) Corticotropin-lipotropin precursor (Pro-opiomelanocortin)|
           (POMC) [Contains: NPP; Melanotropin gamma (Gamma-MSH);
           Potential peptide; Corticotropin (Adrenocorticotropic
           hormone) (ACTH); Melanotropin alpha (Alpha-MSH);
           Corticotropin-like
          Length = 264

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +1

Query: 253 PGGDGADPGDREVRTGHPLHPGHRRARPQHPGRRQRAVHPRGRRHLGAQ 399
           P GDGA PG RE +  + +    R  +P    RR   V+P G     A+
Sbjct: 120 PRGDGAGPGPREGKRSYSME-HFRWGKPVGKKRRPVKVYPNGAEDESAE 167

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>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)|
           (Ath-ExpAlpha-1.19)
          Length = 312

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
 Frame = +1

Query: 247 HVPGG-DGADPGDREVRTGHPLHPGHRRARPQHPGRRQRAVHP 372
           HVPGG  GA P        H  HP H  A P H        HP
Sbjct: 33  HVPGGRPGAHPS-HGAHPAHGAHPSH-GAHPSHGAHPSHGAHP 73

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>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1717

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 355 GGGRDAVVEPADVRDVVGAQFVPPDPRDQHRP 260
           G G  A  EPA+     G +  PP+PRD   P
Sbjct: 251 GPGAAAAREPAEPPPEAGPRLAPPEPRDSEVP 282

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>UXUA_BACFR (Q650A0) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)|
          Length = 396

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = -1

Query: 256 LERVRSLHHVLRGFLCRQMARRRALPGEARRGHQRREDQQGRRLAGHA 113
           LE    ++HV++ FL  Q  R+ ++P     GHQ  +D + +   G++
Sbjct: 326 LEGDVDMYHVMKAFLELQQRRKVSIPMRPDHGHQMVDDLKKKTNPGYS 373

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>UXUA_BACFN (Q5LIV6) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)|
          Length = 396

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = -1

Query: 256 LERVRSLHHVLRGFLCRQMARRRALPGEARRGHQRREDQQGRRLAGHA 113
           LE    ++HV++ FL  Q  R+ ++P     GHQ  +D + +   G++
Sbjct: 326 LEGDVDMYHVMKAFLELQQRRKVSIPMRPDHGHQMVDDLKKKTNPGYS 373

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>KI13A_MOUSE (Q9EQW7) Kinesin-like protein KIF13A|
          Length = 1749

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 341  IPAAANGQFIPGADDTWVPNPGFE 412
            +PA  +G  IPGA   WVP PG E
Sbjct: 1136 VPAPGSG--IPGAPADWVPPPGME 1157

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>ACVS1_PENCH (P19787) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase|
            (EC 6.3.2.26)
            (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine
            synthetase) (ACV synthetase) (ACVS)
          Length = 3746

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +2

Query: 320  IGGLDHSIPAAANGQFIPGADDT---WVPNP 403
            + GLD  +P+ ++ Q +P  DDT   WV NP
Sbjct: 3699 LNGLDSLLPSDSDVQLVPLTDDTHFSWVGNP 3729

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>YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon Tn4556|
          Length = 395

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 307 LHPGHRRARPQHPGRRQRAVH-PRGRRHLGAQPR 405
           L PG +  R QH  + QR VH PR   H G Q R
Sbjct: 162 LRPGQQLRRDQHLQQVQRVVHRPRREVHGGGQQR 195

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>LZTS2_MOUSE (Q91YU6) Leucine zipper putative tumor suppressor 2|
          Length = 671

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 220 GFLCRQMAR-RRALPGEARRGHQRREDQQGRRLAGHADR 107
           G L  Q+ R R+ L  E RRG ++R+  +G RLA  A++
Sbjct: 571 GSLRAQVERLRQELQREQRRGDEQRDSFEGERLAWQAEK 609

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>KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like protein RBKIN)|
          Length = 1805

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 341  IPAAANGQFIPGADDTWVPNPGFE 412
            +PA  +G  IPGA   W+P PG E
Sbjct: 1149 VPAPGSG--IPGAPADWIPPPGME 1170

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>Y3466_MYCTU (O06331) Hypothetical protein Rv3466/MT3572|
          Length = 222

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 19/60 (31%)
 Frame = +1

Query: 262 DGADPGDREVRTGHPLHPGHR-------------------RARPQHPGRRQRAVHPRGRR 384
           D AD G R   TG PL P                      RA  + P RR   VHP GRR
Sbjct: 95  DAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHVKVIRALFRPPARRGGCVHPPGRR 154

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>Y1614_MYCBO (P0A5F2) Hypothetical protein Mb1614c|
          Length = 222

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 19/60 (31%)
 Frame = +1

Query: 262 DGADPGDREVRTGHPLHPGHR-------------------RARPQHPGRRQRAVHPRGRR 384
           D AD G R   TG PL P                      RA  + P RR   VHP GRR
Sbjct: 95  DAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRR 154

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>Y1588_MYCTU (P0A5F1) Hypothetical protein Rv1588c/MT1623|
          Length = 222

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 19/60 (31%)
 Frame = +1

Query: 262 DGADPGDREVRTGHPLHPGHR-------------------RARPQHPGRRQRAVHPRGRR 384
           D AD G R   TG PL P                      RA  + P RR   VHP GRR
Sbjct: 95  DAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRR 154

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>GSC_DROME (P54366) Homeobox protein goosecoid|
          Length = 419

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +1

Query: 295 TGHPLHPGHRRARPQHPGRRQRAVHPRGRRHL 390
           +GH  HP H    P HP       H  G+ HL
Sbjct: 246 SGHGHHPHHPHGHPHHP---HLGAHHHGQHHL 274

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>OPLA_BOVIN (Q75WB5) 5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase)|
            (Pyroglutamase) (5-OPase)
          Length = 1288

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = +1

Query: 247  HVPGGDG-ADPGDREVRTGHPLHP 315
            H PGG G  DPGD     G PL P
Sbjct: 1246 HTPGGGGYGDPGDPAPLPGSPLQP 1269

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>H3_ENCAL (P08903) Histone H3|
          Length = 135

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 218 PAEDVVKRPDTFQEGTVLIPGIGRYELGTHYI 313
           PA   VK+P  F+ GTV +  I RY+  T  +
Sbjct: 30  PATGGVKKPHRFRPGTVALREIRRYQKSTELL 61

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>H34_STYLE (P81198) Histone H3-4 (Fragment)|
          Length = 112

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 218 PAEDVVKRPDTFQEGTVLIPGIGRYELGTHYI 313
           PA+  VK+P  F+ GTV +  I +Y+  T  +
Sbjct: 21  PADGGVKKPHRFRPGTVALREIRKYQKSTELL 52

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>LZTS2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2 (Protein|
           LAPSER1)
          Length = 669

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 220 GFLCRQMARRRA-LPGEARRGHQRREDQQGRRLAGHADR 107
           G L  Q+ R R  L  E RRG ++R+  +G RLA  A++
Sbjct: 569 GSLRAQVERLRVELQRERRRGEEQRDSFEGERLAWQAEK 607

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>BRO1_ASPFU (Q4X0Z5) Vacuolar protein-sorting protein bro1 (BRO|
           domain-containing protein 1)
          Length = 976

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = +2

Query: 275 PGIGRYELGTHYIPDIGGLDHSIP----AAANGQFI 370
           PGI   ++  H+ P + G  H IP     A  GQ++
Sbjct: 806 PGIASPQMSPHFAPGVAGQQHGIPLSHSPAPYGQYV 841

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>PALST_EUGGR (P84739) Photoactivated adenylate cyclase alpha-subunit-like protein|
            ST-
          Length = 1019

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +1

Query: 271  DPGDREVRTGHPLHPGHRRARPQHPGRRQRAVHP 372
            D G R       LHPG      QHP R  RA  P
Sbjct: 962  DEGHRPEAPHQSLHPGPGDPSEQHPHRPNRATEP 995

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>TIG_STRP8 (Q8NZF6) Trigger factor (TF)|
          Length = 427

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +2

Query: 221 AEDVVKRPDTFQEGTVLIPGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDTWV 394
           AE ++K  +  Q  TV+I  +G  + G  +  D G  D+      +GQFIPG +D  V
Sbjct: 151 AELIIKDGEAAQGDTVVIDFVGSVD-GVEF--DGGKGDNFSLELGSGQFIPGFEDQLV 205

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>TIG_STRP6 (Q5XA08) Trigger factor (TF)|
          Length = 427

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +2

Query: 221 AEDVVKRPDTFQEGTVLIPGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDTWV 394
           AE ++K  +  Q  TV+I  +G  + G  +  D G  D+      +GQFIPG +D  V
Sbjct: 151 AELIIKDGEAAQGDTVVIDFVGSVD-GVEF--DGGKGDNFSLELGSGQFIPGFEDQLV 205

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>TIG_STRP3 (Q879L7) Trigger factor (TF)|
          Length = 427

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +2

Query: 221 AEDVVKRPDTFQEGTVLIPGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDTWV 394
           AE ++K  +  Q  TV+I  +G  + G  +  D G  D+      +GQFIPG +D  V
Sbjct: 151 AELIIKDGEAAQGDTVVIDFVGSVD-GVEF--DGGKGDNFSLELGSGQFIPGFEDQLV 205

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>TIG_STRP1 (P0C0E1) Trigger factor (TF)|
          Length = 427

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +2

Query: 221 AEDVVKRPDTFQEGTVLIPGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDTWV 394
           AE ++K  +  Q  TV+I  +G  + G  +  D G  D+      +GQFIPG +D  V
Sbjct: 151 AELIIKDGEAAQGDTVVIDFVGSVD-GVEF--DGGKGDNFSLELGSGQFIPGFEDQLV 205

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>MSL5_YEAST (Q12186) Branchpoint-bridging protein MSL5 (MUD synthesis lethal 5|
           protein)
          Length = 476

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 375 PGMNCPLAAAGMLWSSPPMSGM*WVPSSYLPIPGISTVPSWN 250
           P +  P  +    +S PP  GM  V SS  P PG+S  P ++
Sbjct: 414 PPLQSPPESEQPKFSLPPPPGMTTVQSSIAPPPGLSGPPGFS 455

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>ILVD_GLUOX (Q5FN26) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 618

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 300 PSSYLPIPGISTVPSWNVSGRFTTSSAGFSAG 205
           P+SYL   G+  V +    GRF+  S+G S G
Sbjct: 494 PTSYLKSKGLGKVCALITDGRFSGGSSGLSIG 525

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>VE2_HPV03 (P36778) Regulatory protein E2|
          Length = 383

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 5   HNESNSQRSRQQEKLTHSASYHQSRSQRATQPLD 106
           + E   Q+ +QQ++  H+ +     ++RA QPLD
Sbjct: 245 YGEQQQQQQQQQQQQQHTQTPAPQTTERARQPLD 278

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>Y6023_STRCO (O69853) Exopolysaccharide phosphotransferase SCO6023 (EC 2.7.-.-)|
           (Stealth protein SCO6023)
          Length = 586

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 31/85 (36%), Positives = 38/85 (44%)
 Frame = -1

Query: 358 VGGGRDAVVEPADVRDVVGAQFVPPDPRDQHRPLLERVRSLHHVLRGFLCRQMARRRALP 179
           VG  R  V  PA +R  V A+ VP   R   + LL R+  L    R F  R    RR  P
Sbjct: 12  VGAYRSLV--PAGLRRRV-ARRVPAGLRTVLKHLLRRLHVLSLASRLF--RGFRARRRWP 66

Query: 178 GEARRGHQRREDQQGRRLAGHADRV 104
                 H  RE ++   LAGH DR+
Sbjct: 67  ------HLFREGERLAALAGHGDRI 85

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>CLPP_PINCO (P36387) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 205

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +2

Query: 221 AEDVVKRPDTFQE--GTVLIPGIGRYELGTHYIPDIGGLDHSIPAAANGQFI 370
           AED  K   +F    G  +IPG+G Y +    +PD+  +   + AA+ G FI
Sbjct: 56  AEDANKEIFSFINCPGGSVIPGVGLYRMMQAIVPDVNTICMGV-AASMGSFI 106

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>BINCA_HUMAN (Q96LW7) Bcl10-interacting CARD protein (BinCARD)|
          Length = 228

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 405 PGLGTQVSSAPGMNCPLAAAGMLWSSPPMSGM*WVPSSYLPIP 277
           PGL + ++SAP    P    G +W +  +  +  V S +LP+P
Sbjct: 139 PGLASPLASAPPQRPPSGPEGRVWQAQAVQMLVSV-SHFLPLP 180

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>KI67_HUMAN (P46013) Antigen KI-67|
          Length = 3256

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
 Frame = -1

Query: 370  DELPVGGGRD--AVVEPA----DVRDVVGAQFVPPDPRDQHRPL 257
            D+ PVG G+   A  +PA    D  DV+G++  P  P+++ +PL
Sbjct: 2872 DKEPVGEGKGTKAFKQPAKRNVDAEDVIGSRRQPRAPKEKAQPL 2915

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>CHVI_RHISN (P50351) Transcriptional regulatory protein chvI|
          Length = 238

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 316 GHRRARPQHPGRRQRAVHPRGR 381
           G RR+RP  PGR + A HP  R
Sbjct: 120 GPRRSRPGSPGRAKSARHPIAR 141

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>KI13B_HUMAN (Q9NQT8) Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)|
          Length = 1826

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 341  IPAAANGQFIPGADDTWVPNPGFE 412
            +P+A +G  IPGA   W P PG E
Sbjct: 1146 VPSAGSG--IPGAPAEWTPVPGME 1167

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>RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 18  TASDRDSKKSSLTQLATTSPDHSELPSHST 107
           TA D D K  ++ Q +  SP H E+P H T
Sbjct: 137 TAKD-DQKSKAMIQNSLESPPHEEVPKHLT 165

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>YPR2_ECOLI (P10018) Hypothetical 14.7 kDa protein (ORF 2)|
          Length = 131

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -1

Query: 253 ERVRSLHHVLRGFLCRQMARRRAL-----PGEARRGHQRREDQQGRR 128
           ++    +H +RG   RQ  RR        PG+ R  H   E+QQGR+
Sbjct: 34  QKTEDANHFIRGQHHRQAPRRPRSSDLLKPGQIRAQHLAVEEQQGRQ 80


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,057,923
Number of Sequences: 219361
Number of extensions: 915753
Number of successful extensions: 4080
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 3876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4076
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result