ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl44a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104113.1| Zea mays PCO107293 mRNA sequence 214 2e-52
2ref|XM_478743.1| Oryza sativa (japonica cultivar-group), mRNA 127 3e-26
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
4dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
5dbj|AK062834.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
6ref|NM_187719.1| Oryza sativa (japonica cultivar-group), predic... 46 0.089
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
8dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
9dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
10dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
11gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 44 0.35
12gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 44 0.35
13gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.35
14gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.4
15gb|AC135957.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
16emb|AL357912.10| Human DNA sequence from clone RP11-328N1 on chr... 42 1.4
17emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 1.4
18emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 42 1.4
19gb|AC095353.9| Homo sapiens Xp BAC RP11-615L18 (Roswell Park Can... 42 1.4
20dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
21gb|AC069154.5| Homo sapiens BAC clone RP11-689F8 from 2, complet... 42 1.4
22dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.4
23gb|AE004671.1| Pseudomonas aeruginosa PAO1, section 232 of 529 o... 42 1.4
24gb|AC119752.3| Homo sapiens BAC clone RP11-700D1 from 4, complet... 42 1.4
25dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
26gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
27gb|AC174053.1| Homo sapiens chromosome 4 clone WI2-3501I17, comp... 42 1.4
28ref|XM_478229.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
29gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 5.5
30gb|AF335591.1| Homo sapiens WNT4 (WNT4) gene, partial cds 40 5.5
31gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.5
32gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.5
33gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.5
34gb|AC114919.5| Mus musculus BAC clone RP23-102A8 from 18, comple... 40 5.5
35gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 5.5
36emb|AL445253.13| Human DNA sequence from clone RP4-660K3 on chro... 40 5.5
37gb|AY956334.1| Streptomyces aureofaciens strain CCM3239 auricin ... 40 5.5
38emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.5
39emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.5
40gb|AY033057.1|AY033055S3 Homo sapiens secreted glycoprotein Wnt4... 40 5.5
41gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 5.5
42gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 5.5
43gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 5.5
44gb|AE004884.1| Pseudomonas aeruginosa PAO1, section 445 of 529 o... 40 5.5
45gb|AE004485.1| Pseudomonas aeruginosa PAO1, section 46 of 529 of... 40 5.5
46gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.5
47dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
48gb|AE005062.1| Halobacterium sp. NRC-1 section 93 of 170 of the ... 40 5.5
49dbj|AK108797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
50gb|AF147449.2|AF147449 Pseudomonas aeruginosa strain PAO1 penici... 40 5.5
51gb|AY106805.1| Zea mays PCO131201 mRNA sequence 40 5.5
52tpe|BN000631.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 5.5
53gb|U03114.2|SAU03114 Streptomyces albus lipase precursor (lip) a... 40 5.5
54gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.5 
>gb|AY104113.1| Zea mays PCO107293 mRNA sequence
          Length = 877

 Score =  214 bits (108), Expect = 2e-52
 Identities = 162/180 (90%)
 Strand = Plus / Plus

                                                                       
Query: 233 gtgaagcgaccggacacgttccaggaggggacggtgctgatcccggggatcgggaggtac 292
           |||||||| ||||||||| | || |||||||||||||||||||||||||| ||| | |||
Sbjct: 233 gtgaagcggccggacacgctgcacgaggggacggtgctgatcccggggatggggcgctac 292

                                                                       
Query: 293 gaactgggcacccactacatcccggacatcggcgggctcgaccacagcatcccggccgcc 352
           ||  | |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 293 gagatcggcagccactacatcccggacatcggcgggctggaccacagcatccccgccgcc 352

                                                                       
Query: 353 gccaacgggcagttcatccccggggccgacgacacctgggtgcccaaccccggcttcgag 412
            || |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 353 acccacggccagttcctccccggcgccgacgacacctgggtgcccaaccccggcttcgag 412
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>ref|XM_478743.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 682

 Score =  127 bits (64), Expect = 3e-26
 Identities = 151/180 (83%)
 Strand = Plus / Plus

                                                                       
Query: 233 gtgaagcgaccggacacgttccaggaggggacggtgctgatcccggggatcgggaggtac 292
           |||||||  ||||| |||||||| |||||||||||| ||||||| ||| ||||| ||| |
Sbjct: 229 gtgaagcagccggagacgttccacgaggggacggtgttgatccctgggctcgggcggttc 288

                                                                       
Query: 293 gaactgggcacccactacatcccggacatcggcgggctcgaccacagcatcccggccgcc 352
           || || |||| |  |||| | |||||||||  |||  ||||||||||| ||||||| |||
Sbjct: 289 gagctcggcagcacctacgtgccggacatcaccggagtcgaccacagcgtcccggcagcc 348

                                                                       
Query: 353 gccaacgggcagttcatccccggggccgacgacacctgggtgcccaaccccggcttcgag 412
           |   ||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 349 gagcacgggcagttcctccccggcgccgacgacacatgggtccccaaccccggcttcgag 408
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 3e-26
 Identities = 151/180 (83%)
 Strand = Plus / Minus

                                                                            
Query: 233      gtgaagcgaccggacacgttccaggaggggacggtgctgatcccggggatcgggaggtac 292
                |||||||  ||||| |||||||| |||||||||||| ||||||| ||| ||||| ||| |
Sbjct: 22642888 gtgaagcagccggagacgttccacgaggggacggtgttgatccctgggctcgggcggttc 22642829

                                                                            
Query: 293      gaactgggcacccactacatcccggacatcggcgggctcgaccacagcatcccggccgcc 352
                || || |||| |  |||| | |||||||||  |||  ||||||||||| ||||||| |||
Sbjct: 22642828 gagctcggcagcacctacgtgccggacatcaccggagtcgaccacagcgtcccggcagcc 22642769

                                                                            
Query: 353      gccaacgggcagttcatccccggggccgacgacacctgggtgcccaaccccggcttcgag 412
                |   ||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 22642768 gagcacgggcagttcctccccggcgccgacgacacatgggtccccaaccccggcttcgag 22642709



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 144      tcctcgcggcgctggtggccgcgg 167
                ||||||||||||||||||| ||||
Sbjct: 18712212 tcctcgcggcgctggtggcggcgg 18712235
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>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1773_H01
          Length = 146543

 Score =  127 bits (64), Expect = 3e-26
 Identities = 151/180 (83%)
 Strand = Plus / Minus

                                                                         
Query: 233   gtgaagcgaccggacacgttccaggaggggacggtgctgatcccggggatcgggaggtac 292
             |||||||  ||||| |||||||| |||||||||||| ||||||| ||| ||||| ||| |
Sbjct: 60786 gtgaagcagccggagacgttccacgaggggacggtgttgatccctgggctcgggcggttc 60727

                                                                         
Query: 293   gaactgggcacccactacatcccggacatcggcgggctcgaccacagcatcccggccgcc 352
             || || |||| |  |||| | |||||||||  |||  ||||||||||| ||||||| |||
Sbjct: 60726 gagctcggcagcacctacgtgccggacatcaccggagtcgaccacagcgtcccggcagcc 60667

                                                                         
Query: 353   gccaacgggcagttcatccccggggccgacgacacctgggtgcccaaccccggcttcgag 412
             |   ||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 60666 gagcacgggcagttcctccccggcgccgacgacacatgggtccccaaccccggcttcgag 60607
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>dbj|AK062834.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-G10, full
           insert sequence
          Length = 682

 Score =  127 bits (64), Expect = 3e-26
 Identities = 151/180 (83%)
 Strand = Plus / Plus

                                                                       
Query: 233 gtgaagcgaccggacacgttccaggaggggacggtgctgatcccggggatcgggaggtac 292
           |||||||  ||||| |||||||| |||||||||||| ||||||| ||| ||||| ||| |
Sbjct: 229 gtgaagcagccggagacgttccacgaggggacggtgttgatccctgggctcgggcggttc 288

                                                                       
Query: 293 gaactgggcacccactacatcccggacatcggcgggctcgaccacagcatcccggccgcc 352
           || || |||| |  |||| | |||||||||  |||  ||||||||||| ||||||| |||
Sbjct: 289 gagctcggcagcacctacgtgccggacatcaccggagtcgaccacagcgtcccggcagcc 348

                                                                       
Query: 353 gccaacgggcagttcatccccggggccgacgacacctgggtgcccaaccccggcttcgag 412
           |   ||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 349 gagcacgggcagttcctccccggcgccgacgacacatgggtccccaaccccggcttcgag 408
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>ref|NM_187719.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 157 ggtggccgcggcgtgcctcgccg 179
           |||||||||||||||||||||||
Sbjct: 528 ggtggccgcggcgtgcctcgccg 550
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 157      ggtggccgcggcgtgcctcgccg 179
                |||||||||||||||||||||||
Sbjct: 10163005 ggtggccgcggcgtgcctcgccg 10163027
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>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0581F09
          Length = 154248

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 157    ggtggccgcggcgtgcctcgccg 179
              |||||||||||||||||||||||
Sbjct: 110474 ggtggccgcggcgtgcctcgccg 110496
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>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0498A12
          Length = 159749

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 157   ggtggccgcggcgtgcctcgccg 179
             |||||||||||||||||||||||
Sbjct: 28319 ggtggccgcggcgtgcctcgccg 28341
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>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0004B13
          Length = 142268

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 157   ggtggccgcggcgtgcctcgccg 179
             |||||||||||||||||||||||
Sbjct: 87604 ggtggccgcggcgtgcctcgccg 87626
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 317    gacatcggcgggctcgaccaca 338
              ||||||||||||||||||||||
Sbjct: 201218 gacatcggcgggctcgaccaca 201197
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 137     ctgctgatcctcgcggcgctggtggccgcg 166
               |||||||||||||| |||||||||| ||||
Sbjct: 1768881 ctgctgatcctcgccgcgctggtggtcgcg 1768852



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 137     ctgctgatcctcgcggcgctggtggccg 164
               ||||||||| ||||||||||||| ||||
Sbjct: 4650815 ctgctgatcttcgcggcgctggtcgccg 4650842
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 137     ctgctgatcctcgcggcgctggtggc 162
               |||||||||||||| |||||||||||
Sbjct: 1765798 ctgctgatcctcgccgcgctggtggc 1765773
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 140     ctgatcctcgcggcgctggtggccg 164
               |||||||||||||||||| ||||||
Sbjct: 1245765 ctgatcctcgcggcgctgctggccg 1245741
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>gb|AC135957.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0037P02 map E61794SA, complete sequence
          Length = 131645

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 171   gcctcgccgggcagggctcggcggcgcgc 199
             |||||||||||||||||  ||||||||||
Sbjct: 40887 gcctcgccgggcagggcggggcggcgcgc 40859
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>emb|AL357912.10| Human DNA sequence from clone RP11-328N1 on chromosome 1 Contains the
             3' end of a novel gene and the 5' end of the DNAH14 gene
             for dynein (axonemal) heavy polypeptide 14, complete
             sequence
          Length = 130057

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    agacagcaagaaaagctcact 52
             |||||||||||||||||||||
Sbjct: 32952 agacagcaagaaaagctcact 32932
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 101     ctcgacgcggtcggcatggcc 121
               |||||||||||||||||||||
Sbjct: 3398645 ctcgacgcggtcggcatggcc 3398665
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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 190    ggcggcgcgccatctgccggc 210
              |||||||||||||||||||||
Sbjct: 336267 ggcggcgcgccatctgccggc 336247
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>gb|AC095353.9| Homo sapiens Xp BAC RP11-615L18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 142000

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    agacagcaagaaaagctcact 52
             |||||||||||||||||||||
Sbjct: 95330 agacagcaagaaaagctcact 95350
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 171     gcctcgccgggcagggctcggcggcgcgc 199
               |||||||||||||||||  ||||||||||
Sbjct: 9487704 gcctcgccgggcagggcggggcggcgcgc 9487676
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>gb|AC069154.5| Homo sapiens BAC clone RP11-689F8 from 2, complete sequence
          Length = 167132

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     agacagcaagaaaagctcact 52
              |||||||||||||||||||||
Sbjct: 105434 agacagcaagaaaagctcact 105414
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 137     ctgctgatcctcgcggcgctg 157
               |||||||||||||||||||||
Sbjct: 8375167 ctgctgatcctcgcggcgctg 8375147



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 172     cctcgccgggcagggctcggcggc 195
               |||||||||||||||| |||||||
Sbjct: 8114768 cctcgccgggcagggcgcggcggc 8114745



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 150     cggcgctggtggccgcggcgtgcc 173
               ||||||||||||||||||| ||||
Sbjct: 4658786 cggcgctggtggccgcggcctgcc 4658763
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>gb|AE004671.1| Pseudomonas aeruginosa PAO1, section 232 of 529 of the complete
            genome
          Length = 10746

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 365  ttcatccccggggccgacgac 385
            |||||||||||||||||||||
Sbjct: 8423 ttcatccccggggccgacgac 8403
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>gb|AC119752.3| Homo sapiens BAC clone RP11-700D1 from 4, complete sequence
          Length = 55438

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 120   ccagcaagtcggcgtccctgc 140
             |||||||||||||||||||||
Sbjct: 43740 ccagcaagtcggcgtccctgc 43760



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 120  ccagcaagtcggcgtccctgc 140
            |||||||||||||||||||||
Sbjct: 3551 ccagcaagtcggcgtccctgc 3531
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 265     ggtgctgatcccggggatcgg 285
               |||||||||||||||||||||
Sbjct: 1921614 ggtgctgatcccggggatcgg 1921634



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     cggcgctggtggccgcggcg 169
               ||||||||||||||||||||
Sbjct: 5706213 cggcgctggtggccgcggcg 5706194



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 150     cggcgctggtggccgcggcg 169
               ||||||||||||||||||||
Sbjct: 3503308 cggcgctggtggccgcggcg 3503327



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 149    gcggcgctggtggccgcggcgtgc 172
              |||||||||||||||||| |||||
Sbjct: 657409 gcggcgctggtggccgcgccgtgc 657432
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 171     gcctcgccgggcagggctcggcggcgcgc 199
               |||||||||||||||||  ||||||||||
Sbjct: 9559401 gcctcgccgggcagggcggggcggcgcgc 9559373
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>gb|AC174053.1| Homo sapiens chromosome 4 clone WI2-3501I17, complete sequence
          Length = 39772

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 120   ccagcaagtcggcgtccctgc 140
             |||||||||||||||||||||
Sbjct: 33761 ccagcaagtcggcgtccctgc 33741
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>ref|XM_478229.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1266

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 144 tcctcgcggcgctggtggccgcgg 167
           ||||||||||||||||||| ||||
Sbjct: 119 tcctcgcggcgctggtggcggcgg 142
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 139     gctgatcctcgcggcgctggtggc 162
               |||||| |||||||||||||||||
Sbjct: 5262205 gctgattctcgcggcgctggtggc 5262228
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>gb|AF335591.1| Homo sapiens WNT4 (WNT4) gene, partial cds
          Length = 6876

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 176  gccgggcagggctcggcggcgcgc 199
            ||||||| ||||||||||||||||
Sbjct: 5144 gccgggccgggctcggcggcgcgc 5167
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 102     tcgacgcggtcggcatggccagca 125
               |||||||||||||| |||||||||
Sbjct: 1335455 tcgacgcggtcggcgtggccagca 1335432
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 139     gctgatcctcgcggcgctggtggc 162
               |||||| |||||||||||||||||
Sbjct: 1437957 gctgattctcgcggcgctggtggc 1437934



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    atcccggacatcggcgggct 330
              ||||||||||||||||||||
Sbjct: 268176 atcccggacatcggcgggct 268195
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 139     gctgatcctcgcggcgctggtggc 162
               ||||||||| ||||||||||||||
Sbjct: 1277552 gctgatcctagcggcgctggtggc 1277529
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>gb|AC114919.5| Mus musculus BAC clone RP23-102A8 from 18, complete sequence
          Length = 185198

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    gctcactcactcagctagct 65
             ||||||||||||||||||||
Sbjct: 32467 gctcactcactcagctagct 32448
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     tgctgatcctcgcggcgctg 157
               ||||||||||||||||||||
Sbjct: 1746647 tgctgatcctcgcggcgctg 1746628
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>emb|AL445253.13| Human DNA sequence from clone RP4-660K3 on chromosome 1 Contains the
            5' end of the WNT4 gene for wingless-type MMTV
            integration site family (member 4) and a CpG island,
            complete sequence
          Length = 17429

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 176  gccgggcagggctcggcggcgcgc 199
            ||||||| ||||||||||||||||
Sbjct: 3507 gccgggccgggctcggcggcgcgc 3484
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>gb|AY956334.1| Streptomyces aureofaciens strain CCM3239 auricin biosynthesis gene
             cluster, partial sequence
          Length = 17455

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   cgcggcgctggtggccgcgg 167
             ||||||||||||||||||||
Sbjct: 16263 cgcggcgctggtggccgcgg 16282
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>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 102    tcgacgcggtcggcatggccagca 125
              |||||||||||||| |||||||||
Sbjct: 302181 tcgacgcggtcggcgtggccagca 302158
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>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             5/14
          Length = 299450

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 102   tcgacgcggtcggcatggccagca 125
             |||||||||||||| |||||||||
Sbjct: 22618 tcgacgcggtcggcgtggccagca 22595
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>gb|AY033057.1|AY033055S3 Homo sapiens secreted glycoprotein Wnt4 (WNT4) gene, exon 1 and
            partial cds
          Length = 5334

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 176  gccgggcagggctcggcggcgcgc 199
            ||||||| ||||||||||||||||
Sbjct: 2191 gccgggccgggctcggcggcgcgc 2214
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 138     tgctgatcctcgcggcgctggtgg 161
               ||||||||||||||||| ||||||
Sbjct: 1116047 tgctgatcctcgcggcggtggtgg 1116070
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    acagcatcccggccgccgcc 355
              ||||||||||||||||||||
Sbjct: 310709 acagcatcccggccgccgcc 310690
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    gtgctgatcccggggatcgg 285
              ||||||||||||||||||||
Sbjct: 126593 gtgctgatcccggggatcgg 126612
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>gb|AE004884.1| Pseudomonas aeruginosa PAO1, section 445 of 529 of the complete
            genome
          Length = 13179

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  ccgggcagggctcggcggcg 196
            ||||||||||||||||||||
Sbjct: 2133 ccgggcagggctcggcggcg 2114
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>gb|AE004485.1| Pseudomonas aeruginosa PAO1, section 46 of 529 of the complete genome
          Length = 12072

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 139  gctgatcctcgcggcgctgg 158
            ||||||||||||||||||||
Sbjct: 3542 gctgatcctcgcggcgctgg 3561
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 146     ctcgcggcgctggtggccgcggcg 169
               ||||||||||||| ||||||||||
Sbjct: 3937165 ctcgcggcgctggaggccgcggcg 3937188



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 150     cggcgctggtggccgcggcg 169
               ||||||||||||||||||||
Sbjct: 2777006 cggcgctggtggccgcggcg 2777025



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     cggcgctggtggccgcggcg 169
               ||||||||||||||||||||
Sbjct: 1976699 cggcgctggtggccgcggcg 1976680
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>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0055I24
          Length = 155872

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   tcctcgcggcgctggtggccgcgg 167
             ||||||||||||||||||| ||||
Sbjct: 44500 tcctcgcggcgctggtggcggcgg 44523
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>gb|AE005062.1| Halobacterium sp. NRC-1 section 93 of 170 of the complete genome
          Length = 10500

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 316  ggacatcggcgggctcgacc 335
            ||||||||||||||||||||
Sbjct: 1508 ggacatcggcgggctcgacc 1489
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>dbj|AK108797.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-C03, full
           insert sequence
          Length = 1266

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 144 tcctcgcggcgctggtggccgcgg 167
           ||||||||||||||||||| ||||
Sbjct: 119 tcctcgcggcgctggtggcggcgg 142
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>gb|AF147449.2|AF147449 Pseudomonas aeruginosa strain PAO1 penicillin-binding protein 1B
            (ponB) gene, complete cds
          Length = 5037

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 177  ccgggcagggctcggcggcg 196
            ||||||||||||||||||||
Sbjct: 2803 ccgggcagggctcggcggcg 2822
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>gb|AY106805.1| Zea mays PCO131201 mRNA sequence
          Length = 760

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 156 tggtggccgcggcgtgcctcgccg 179
           ||||||||||||| ||||||||||
Sbjct: 109 tggtggccgcggcctgcctcgccg 132
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>tpe|BN000631.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx102 gene
           for class III peroxidase 102 precursor, exons 1-3
          Length = 1252

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 144 tcctcgcggcgctggtggccgcgg 167
           ||||||||||||||||||| ||||
Sbjct: 68  tcctcgcggcgctggtggcggcgg 91
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>gb|U03114.2|SAU03114 Streptomyces albus lipase precursor (lip) and LipR genes, complete
           cds; and unknown gene
          Length = 4855

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 catcccggccgccgccaacg 359
           ||||||||||||||||||||
Sbjct: 430 catcccggccgccgccaacg 449
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 111     tcggcatggccagcaagtcg 130
               ||||||||||||||||||||
Sbjct: 4136607 tcggcatggccagcaagtcg 4136626


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,555,165
Number of Sequences: 3902068
Number of extensions: 2555165
Number of successful extensions: 48491
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46254
Number of HSP's gapped (non-prelim): 2237
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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