>RIF1_SCHPO (Q96UP3) Telomere length regulator protein rif1|
          Length = 1400

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +2

Query: 23  GPRVSRVVASRALHTHRCQRGPPAPHPM 106
           GP++++ +A++ LH   CQ+ P + HP+
Sbjct: 206 GPKLTKALAAQHLHLLSCQKCPLSIHPL 233

>CTND2_MOUSE (O35927) Catenin delta-2 (Neural plakophilin-related ARM-repeat|
           protein) (NPRAP) (Neurojungin)
          Length = 1247

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 20  SGPRVSRVVASRALHTHRCQRGPPAPHPMATASPPLATAFH 142
           +G   S+    RA H    +  PP P P    +P L +AFH
Sbjct: 198 AGQSFSQGTTGRAGHLAGSEPAPPPPPPREPFAPSLGSAFH 238

>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7|
            homolog
          Length = 1304

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
 Frame = +2

Query: 11   RVQSGPRVSR----VVASRALHTHRCQRGPPAPHPMATASPPLATAFHP 145
            +  + PR+ +    V ASRA      +  PPA  P   +SPP    + P
Sbjct: 1076 KTPTDPRLQKPADPVAASRAAKPCPTEASPPAASPSGDSSPPATAPYDP 1124

>TNR1A_BOVIN (O19131) Tumor necrosis factor receptor superfamily member 1A|
           precursor (p60) (TNF-R1) (TNF-RI) (TNFR-I) (p55)
          Length = 471

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 65  THRCQRGPPAPHPMATASPPLAT 133
           TH C  GPPA   + T  PP +T
Sbjct: 325 THLCTPGPPASTHLCTPGPPAST 347

>MOS_XENLA (P12965) Serine/threonine-protein kinase mos (EC 2.7.11.1)|
           (pp39-mos)
          Length = 359

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 11  RVQSGPRVSRVVASRALHTHRCQRGPPAPHPMATASPPLAT 133
           R Q  P   +++         C  GPP+  P + A PPL T
Sbjct: 317 RPQERPNAEQLLERLEQECAMCTGGPPSCSPESNAPPPLGT 357

>PSBQ2_MAIZE (Q41806) Oxygen-evolving enhancer protein 3-2, chloroplast|
           precursor (OEE3) (16 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 16 kDa subunit)
           (Ferredoxin-NADP reductase-binding protein) (BP)
          Length = 213

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 20  SGPRVSRVVASRALHTHRCQRGPPAPHPMATA-SPPLATAFH 142
           S  R + VV   +    RC  GP     +ATA SPPL+ A H
Sbjct: 22  SRTRTAVVVVRASAEGDRCAGGPRCDRLVATASSPPLSQAVH 63


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.128    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,588,430
Number of Sequences: 219361
Number of extensions: 295921
Number of successful extensions: 1787
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1785
length of database: 80,573,946
effective HSP length: 24
effective length of database: 75,309,282
effective search space used: 1807422768
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)