ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
2dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine d... 224 2e-55
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
4dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
5gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence 155 1e-34
6gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-... 155 1e-34
7ref|XM_481776.1| Oryza sativa (japonica cultivar-group), mRNA 109 7e-21
8ref|XM_481775.1| Oryza sativa (japonica cultivar-group), mRNA 109 7e-21
9dbj|AK066783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 4e-19
10gb|AY111528.1| Zea mays CL2353_1 mRNA sequence 101 2e-18
11gb|L33912.1|MZEAKHD Zea mays (clone pAKHSDH1) aspartate kinase-h... 101 2e-18
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
13dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
14dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 44 0.36
15gb|DQ213556.1| Taeniopygia guttata clone 0058P0055A05 U3 snoRNP ... 42 1.4
16gb|DQ213555.1| Taeniopygia guttata clone 0058P0055E07 U3 snoRNP ... 42 1.4
17gb|DQ213554.1| Taeniopygia guttata clone 0058P0055F07 U3 snoRNP ... 42 1.4
18gb|DQ213553.1| Taeniopygia guttata clone 0058P0059C06 U3 snoRNP ... 42 1.4
19gb|DQ213552.1| Taeniopygia guttata clone 0058P0055D07 U3 snoRNP ... 42 1.4
20gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p1... 40 5.6
21gb|AC091808.4| Homo sapiens chromosome X clone RP11-157D23 map p... 40 5.6
22gb|AC017060.7| Homo sapiens BAC clone RP11-350D14 from 7, comple... 40 5.6
23emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chro... 40 5.6
24gb|CP000088.1| Thermobifida fusca YX, complete genome 40 5.6
25gb|AF421223.1| Acanthopteroctetes unifasciata 18S ribosomal RNA ... 40 5.6
26gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419... 40 5.6
27dbj|AP000427.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 5.6
28emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chr... 40 5.6
29dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 5.6
30dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 5.6 
>dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146N15, full
           insert sequence
          Length = 3120

 Score =  224 bits (113), Expect = 2e-55
 Identities = 173/193 (89%)
 Strand = Plus / Plus

                                                                       
Query: 225 tttgccaagacatggttctaagaatctgctcacaccagctgctgccgtttcagttgaaca 284
           ||||| |||||||||||| | |||| ||||| || | ||||| ||  ||||| |||||||
Sbjct: 253 tttgcaaagacatggttccaggaatttgctcgcagctgctgcggctatttcaattgaaca 312

                                                                       
Query: 285 agttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgcacaagttcggtgg 344
           || |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 313 agctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgcacaagtttggtgg 372

                                                                       
Query: 345 cacttgcatgggaacacctcagagaattcagaatgttgctgatgtagttcttggtgactc 404
           ||| || ||||||||||| |||||||||||||||||||||||| | ||||||||||||||
Sbjct: 373 cacctgtatgggaacaccccagagaattcagaatgttgctgatattgttcttggtgactc 432

                        
Query: 405 ttccgagaggaag 417
           ||| |||||||||
Sbjct: 433 ttctgagaggaag 445



 Score =  133 bits (67), Expect = 5e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 65  gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgcccatcgacgga 124
           |||||||||||||||||||||||||||||||| ||||| | ||||||||   ||| ||  
Sbjct: 81  gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgcggttcgccgcc 140

                                                                       
Query: 125 ggctccggccgtccgcctccggcagggaagtaatttcacaatgtttgaagtgtgagataa 184
           |||  ||  | ||||||||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 141 ggccacgcgcatccgcctccggaagggaagtgatttcacaatgttggaagtgtgagataa 200

                              
Query: 185 atcaggaccgacctttggg 203
           ||||||||| |||||||||
Sbjct: 201 atcaggaccaacctttggg 219
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>dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine dehydrogenase, complete
           cds
          Length = 3061

 Score =  224 bits (113), Expect = 2e-55
 Identities = 173/193 (89%)
 Strand = Plus / Plus

                                                                       
Query: 225 tttgccaagacatggttctaagaatctgctcacaccagctgctgccgtttcagttgaaca 284
           ||||| |||||||||||| | |||| ||||| || | ||||| ||  ||||| |||||||
Sbjct: 220 tttgcaaagacatggttccaggaatttgctcgcagctgctgcggctatttcaattgaaca 279

                                                                       
Query: 285 agttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgcacaagttcggtgg 344
           || |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 280 agctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgcacaagtttggtgg 339

                                                                       
Query: 345 cacttgcatgggaacacctcagagaattcagaatgttgctgatgtagttcttggtgactc 404
           ||| || ||||||||||| |||||||||||||||||||||||| | ||||||||||||||
Sbjct: 340 cacctgtatgggaacaccccagagaattcagaatgttgctgatattgttcttggtgactc 399

                        
Query: 405 ttccgagaggaag 417
           ||| |||||||||
Sbjct: 400 ttctgagaggaag 412



 Score =  133 bits (67), Expect = 5e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 65  gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgcccatcgacgga 124
           |||||||||||||||||||||||||||||||| ||||| | ||||||||   ||| ||  
Sbjct: 48  gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgcggttcgccgcc 107

                                                                       
Query: 125 ggctccggccgtccgcctccggcagggaagtaatttcacaatgtttgaagtgtgagataa 184
           |||  ||  | ||||||||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 108 ggccacgcgcatccgcctccggaagggaagtgatttcacaatgttggaagtgtgagataa 167

                              
Query: 185 atcaggaccgacctttggg 203
           ||||||||| |||||||||
Sbjct: 168 atcaggaccaacctttggg 186
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  210 bits (106), Expect = 3e-51
 Identities = 136/146 (93%)
 Strand = Plus / Minus

                                                                           
Query: 272     tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgc 331
               ||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6953046 tttcaattgaacaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgc 6952987

                                                                           
Query: 332     acaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtag 391
               ||||||| |||||||| || ||||||||||| |||||||||||||||||||||||| | |
Sbjct: 6952986 acaagtttggtggcacctgtatgggaacaccccagagaattcagaatgttgctgatattg 6952927

                                         
Query: 392     ttcttggtgactcttccgagaggaag 417
               |||||||||||||||| |||||||||
Sbjct: 6952926 ttcttggtgactcttctgagaggaag 6952901



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                        
Query: 147     cagggaagtaatttcacaatgtttgaagtgtgagataaatcaggaccgacctttggg 203
               ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 6954192 cagggaagtgatttcacaatgttggaagtgtgagataaatcaggaccaacctttggg 6954136



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                                
Query: 65      gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgc 113
               |||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 6955210 gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgc 6955162
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>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0044K01
          Length = 160643

 Score =  210 bits (106), Expect = 3e-51
 Identities = 136/146 (93%)
 Strand = Plus / Minus

                                                                         
Query: 272   tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgc 331
             ||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 24217 tttcaattgaacaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgc 24158

                                                                         
Query: 332   acaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtag 391
             ||||||| |||||||| || ||||||||||| |||||||||||||||||||||||| | |
Sbjct: 24157 acaagtttggtggcacctgtatgggaacaccccagagaattcagaatgttgctgatattg 24098

                                       
Query: 392   ttcttggtgactcttccgagaggaag 417
             |||||||||||||||| |||||||||
Sbjct: 24097 ttcttggtgactcttctgagaggaag 24072



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                      
Query: 147   cagggaagtaatttcacaatgtttgaagtgtgagataaatcaggaccgacctttggg 203
             ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 25363 cagggaagtgatttcacaatgttggaagtgtgagataaatcaggaccaacctttggg 25307



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                              
Query: 65    gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgc 113
             |||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 26381 gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgc 26333
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>gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence
          Length = 3045

 Score =  155 bits (78), Expect = 1e-34
 Identities = 129/146 (88%)
 Strand = Plus / Plus

                                                                       
Query: 272 tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgc 331
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcagttgaacaagatgaagtcaatacttatcttccaaaaggtgatatgtggtctgtgc 323

                                                                       
Query: 332 acaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtag 391
           ||||||||||||| || || |||||||| ||  | ||||| |||  ||||||  || |||
Sbjct: 324 acaagttcggtggaacctgtatgggaactcccaaaagaatccagtgtgttgcaaatatag 383

                                     
Query: 392 ttcttggtgactcttccgagaggaag 417
           |||||||||| ||||| |||||||||
Sbjct: 384 ttcttggtgattcttctgagaggaag 409
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>gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-homoserine dehydrogenase
           mRNA, complete cds
          Length = 3045

 Score =  155 bits (78), Expect = 1e-34
 Identities = 129/146 (88%)
 Strand = Plus / Plus

                                                                       
Query: 272 tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgc 331
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcagttgaacaagatgaagtcaatacttatcttccaaaaggtgatatgtggtctgtgc 323

                                                                       
Query: 332 acaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtag 391
           ||||||||||||| || || |||||||| ||  | ||||| |||  ||||||  || |||
Sbjct: 324 acaagttcggtggaacctgtatgggaactcccaaaagaatccagtgtgttgcaaatatag 383

                                     
Query: 392 ttcttggtgactcttccgagaggaag 417
           |||||||||| ||||| |||||||||
Sbjct: 384 ttcttggtgattcttctgagaggaag 409
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>ref|XM_481776.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2727

 Score =  109 bits (55), Expect = 7e-21
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 244 aagaatctgctcacaccagctgctgccgtttcagttgaacaagttgaagtcagtacttat 303
           |||||| ||||||  ||||||||||| ||||||||||| |||| |||||  ||| || | 
Sbjct: 255 aagaatatgctcaagccagctgctgctgtttcagttgagcaagctgaagctagtgctcac 314

                                                                       
Query: 304 cttccaaaaggtgatatgtggtctgtgcacaagttcggtggcacttgcatgggaacacct 363
           |||||||||||||| |||||||||||||| || || ||||| || |||||||||||  | 
Sbjct: 315 cttccaaaaggtgacatgtggtctgtgcataaatttggtgggacctgcatgggaacctcc 374

                                  
Query: 364 cagagaattcagaatgttgctga 386
           ||||| ||||||||||| |||||
Sbjct: 375 cagaggattcagaatgtggctga 397



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 74 ggagcctcgccgtcgcgagccc 95
          ||||||||||||||||||||||
Sbjct: 55 ggagcctcgccgtcgcgagccc 76
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>ref|XM_481775.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2766

 Score =  109 bits (55), Expect = 7e-21
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 244 aagaatctgctcacaccagctgctgccgtttcagttgaacaagttgaagtcagtacttat 303
           |||||| ||||||  ||||||||||| ||||||||||| |||| |||||  ||| || | 
Sbjct: 205 aagaatatgctcaagccagctgctgctgtttcagttgagcaagctgaagctagtgctcac 264

                                                                       
Query: 304 cttccaaaaggtgatatgtggtctgtgcacaagttcggtggcacttgcatgggaacacct 363
           |||||||||||||| |||||||||||||| || || ||||| || |||||||||||  | 
Sbjct: 265 cttccaaaaggtgacatgtggtctgtgcataaatttggtgggacctgcatgggaacctcc 324

                                  
Query: 364 cagagaattcagaatgttgctga 386
           ||||| ||||||||||| |||||
Sbjct: 325 cagaggattcagaatgtggctga 347



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 74 ggagcctcgccgtcgcgagccc 95
          ||||||||||||||||||||||
Sbjct: 5  ggagcctcgccgtcgcgagccc 26
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>dbj|AK066783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075O09, full
           insert sequence
          Length = 2726

 Score =  103 bits (52), Expect = 4e-19
 Identities = 109/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 259 ccagctgctgccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgat 318
           ||||||||||| ||||||||||| |||| |||||  ||| || | |||||||||||||| 
Sbjct: 269 ccagctgctgctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgac 328

                                                                       
Query: 319 atgtggtctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaat 378
           |||||||||||||| || || ||||| || |||||||||||  | ||||| |||||||||
Sbjct: 329 atgtggtctgtgcataaatttggtgggacctgcatgggaacctcccagaggattcagaat 388

                   
Query: 379 gttgctga 386
           || |||||
Sbjct: 389 gtggctga 396



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 74 ggagcctcgccgtcgcgagccc 95
          ||||||||||||||||||||||
Sbjct: 54 ggagcctcgccgtcgcgagccc 75
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>gb|AY111528.1| Zea mays CL2353_1 mRNA sequence
          Length = 3153

 Score =  101 bits (51), Expect = 2e-18
 Identities = 129/155 (83%)
 Strand = Plus / Plus

                                                                       
Query: 262 gctgctgccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatg 321
           |||| ||| ||||||||||| |||| |||||  | | || | || ||||||||||| |||
Sbjct: 261 gctggtgctgtttcagttgagcaagctgaagctattgctgacctcccaaaaggtgacatg 320

                                                                       
Query: 322 tggtctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgtt 381
           ||||| ||||||||||| |||||||| |||||||| ||  || |||||||||| ||||||
Sbjct: 321 tggtcggtgcacaagtttggtggcacatgcatggggacctctgagagaattcacaatgtt 380

                                              
Query: 382 gctgatgtagttcttggtgactcttccgagaggaa 416
           |||||| |||| ||| ||||  |||| ||||||||
Sbjct: 381 gctgatatagtccttcgtgatccttctgagaggaa 415
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>gb|L33912.1|MZEAKHD Zea mays (clone pAKHSDH1) aspartate kinase-homoserine dehydrogenase
           mRNA, complete cds
          Length = 3178

 Score =  101 bits (51), Expect = 2e-18
 Identities = 129/155 (83%)
 Strand = Plus / Plus

                                                                       
Query: 262 gctgctgccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatg 321
           |||| ||| ||||||||||| |||| |||||  | | || | || ||||||||||| |||
Sbjct: 261 gctggtgctgtttcagttgagcaagctgaagctattgctgacctcccaaaaggtgacatg 320

                                                                       
Query: 322 tggtctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgtt 381
           ||||| ||||||||||| |||||||| |||||||| ||  || |||||||||| ||||||
Sbjct: 321 tggtcggtgcacaagtttggtggcacatgcatggggacctctgagagaattcacaatgtt 380

                                              
Query: 382 gctgatgtagttcttggtgactcttccgagaggaa 416
           |||||| |||| ||| ||||  |||| ||||||||
Sbjct: 381 gctgatatagtccttcgtgatccttctgagaggaa 415
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                            
Query: 271      gtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtg 330
                ||||||||||| |||| |||||  ||| || | |||||||||||||| ||||||||||||
Sbjct: 15441956 gtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatgtggtctgtg 15441897

                                                                        
Query: 331      cacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctga 386
                || || || ||||| || |||||||||||  | ||||| ||||||||||| |||||
Sbjct: 15441896 cataaatttggtgggacctgcatgggaacctcccagaggattcagaatgtggctga 15441841



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 74       ggagcctcgccgtcgcgagccc 95
                ||||||||||||||||||||||
Sbjct: 15443315 ggagcctcgccgtcgcgagccc 15443294
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>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1790_D02
          Length = 162928

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                          
Query: 271    gtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtg 330
              ||||||||||| |||| |||||  ||| || | |||||||||||||| ||||||||||||
Sbjct: 127532 gtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatgtggtctgtg 127473

                                                                      
Query: 331    cacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctga 386
              || || || ||||| || |||||||||||  | ||||| ||||||||||| |||||
Sbjct: 127472 cataaatttggtgggacctgcatgggaacctcccagaggattcagaatgtggctga 127417



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 74     ggagcctcgccgtcgcgagccc 95
              ||||||||||||||||||||||
Sbjct: 128891 ggagcctcgccgtcgcgagccc 128870
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>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 338    tcggtggcacttgcatgggaacacctcaga 367
              ||||||||||| ||||||||| ||||||||
Sbjct: 361609 tcggtggcactggcatgggaatacctcaga 361638
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>gb|DQ213556.1| Taeniopygia guttata clone 0058P0055A05 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1070

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  ccccgtcccgacagccgccgc 113
           |||||||||||||||||||||
Sbjct: 662 ccccgtcccgacagccgccgc 682
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>gb|DQ213555.1| Taeniopygia guttata clone 0058P0055E07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  ccccgtcccgacagccgccgc 113
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213554.1| Taeniopygia guttata clone 0058P0055F07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  ccccgtcccgacagccgccgc 113
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213553.1| Taeniopygia guttata clone 0058P0059C06 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  ccccgtcccgacagccgccgc 113
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213552.1| Taeniopygia guttata clone 0058P0055D07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  ccccgtcccgacagccgccgc 113
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p11.4, complete sequence
          Length = 218413

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   aagtaatttcacaatgtttg 171
             ||||||||||||||||||||
Sbjct: 91169 aagtaatttcacaatgtttg 91150
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>gb|AC091808.4| Homo sapiens chromosome X clone RP11-157D23 map p11.4, complete sequence
          Length = 170219

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    aagtaatttcacaatgtttg 171
              ||||||||||||||||||||
Sbjct: 149534 aagtaatttcacaatgtttg 149515
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>gb|AC017060.7| Homo sapiens BAC clone RP11-350D14 from 7, complete sequence
          Length = 103354

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  aggaggaaatttgccaagac 235
            ||||||||||||||||||||
Sbjct: 6406 aggaggaaatttgccaagac 6387
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>emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chromosome 13 Contains part
             of the GPC6 gene for glypican 6 and the 3' end of a novel
             gene, complete sequence
          Length = 150021

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   gtttgaagtgtgagataaat 186
             ||||||||||||||||||||
Sbjct: 55476 gtttgaagtgtgagataaat 55495
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 139     gcctccggcagggaagtaat 158
               ||||||||||||||||||||
Sbjct: 1710536 gcctccggcagggaagtaat 1710517
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>gb|AF421223.1| Acanthopteroctetes unifasciata 18S ribosomal RNA gene, partial
           sequence
          Length = 646

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 atcgacggaggctccggccg 135
           ||||||||||||||||||||
Sbjct: 147 atcgacggaggctccggccg 166
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>gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419L20, complete sequence
          Length = 175742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   gtaatttcacaatgtttgaagtgt 177
             ||||||||||||||||| ||||||
Sbjct: 56356 gtaatttcacaatgtttcaagtgt 56333
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>dbj|AP000427.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1171G1
          Length = 187189

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 154   gtaatttcacaatgtttgaagtgt 177
             ||||||||||||||||| ||||||
Sbjct: 39345 gtaatttcacaatgtttcaagtgt 39368
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>emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chromosome 4, complete
             sequence
          Length = 169474

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   agaatctgctcacaccagct 264
             ||||||||||||||||||||
Sbjct: 81779 agaatctgctcacaccagct 81760
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>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 368801

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 290    aagtcagtacttatcttccaaaag 313
              |||||||| |||||||||||||||
Sbjct: 209001 aagtcagttcttatcttccaaaag 208978



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 290    aagtcagtacttatcttccaaaag 313
              |||||||| |||||||||||||||
Sbjct: 132203 aagtcagttcttatcttccaaaag 132226
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>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 501020

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 290    aagtcagtacttatcttccaaaag 313
              |||||||| |||||||||||||||
Sbjct: 500349 aagtcagttcttatcttccaaaag 500372



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 290    aagtcagtacttatcttccaaaag 313
              |||||||| |||||||||||||||
Sbjct: 326840 aagtcagttcttatcttccaaaag 326863



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 290    aagtcagtacttatcttccaaaag 313
              |||||||| |||||||||||||||
Sbjct: 134324 aagtcagttcttatcttccaaaag 134347


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,768,516
Number of Sequences: 3902068
Number of extensions: 2768516
Number of successful extensions: 52220
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52114
Number of HSP's gapped (non-prelim): 104
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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