ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466759.1| Oryza sativa (japonica cultivar-group), mRNA 147 2e-32
2dbj|AK120120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 2e-32
3dbj|AK067382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 2e-32
4ref|XM_473109.1| Oryza sativa (japonica cultivar-group), predic... 143 3e-31
5dbj|AK067306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 3e-31
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
7dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
8emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4,... 86 7e-14
9emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4,... 86 7e-14
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 86 7e-14
11ref|XM_948494.1| Theileria annulata strain Ankara hypothetical p... 42 0.91
12ref|XM_649989.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 3.6
13gb|AC069560.26| Mus musculus strain 129/Sv clone ct7-22f10 map 2... 40 3.6
14dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 40 3.6
15gb|AC013543.16| Homo sapiens chromosome 8, clone RP11-317H6, com... 40 3.6
16gb|AC023866.8| Homo sapiens chromosome 8, clone RP11-787D18, com... 40 3.6
17gb|AC007668.7| Drosophila melanogaster, chromosome 3R, region 87... 40 3.6
18gb|AC007594.5| Drosophila melanogaster, chromosome 3R, region 87... 40 3.6
19gb|AC008226.10|AC008226 Drosophila melanogaster, chromosome 3R, ... 40 3.6
20gb|AC019211.6| Homo sapiens BAC clone RP11-454J11 from 2, comple... 40 3.6
21gb|AC019051.8| Homo sapiens BAC clone RP11-92L24 from 2, complet... 40 3.6
22emb|BX649317.5| Mouse DNA sequence from clone RP23-415G15 on chr... 40 3.6
23gb|AE003696.3| Drosophila melanogaster chromosome 3R, section 34... 40 3.6
24gb|AE003672.4| Drosophila melanogaster chromosome 3R, section 12... 40 3.6
25gb|AC113498.9| Mus musculus chromosome 1, clone RP23-366N18, com... 40 3.6
26gb|CP000186.1| Drosophila melanogaster genomic scaffold 21100002... 40 3.6
27emb|X14037.1|DMDM11 D.melanogaster micropia-Dm11 retrotransposon 40 3.6
28emb|X15066.1|DMMC3DM2 Drosophila retroposon microcopia Dm-2 3'end 40 3.6 
>ref|XM_466759.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3140

 Score =  147 bits (74), Expect = 2e-32
 Identities = 196/236 (83%), Gaps = 3/236 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    atgttcacaaagacatggcctgagcgctcccgccgtctttttatgcaatttgatcctgct 62
            |||||||| |||||||||||||||||||| || || |||||||||  |||||||||||| 
Sbjct: 1561 atgttcaccaagacatggcctgagcgctcacgtcggctttttatgtcatttgatcctgca 1620

                                                                        
Query: 63   atacagaggacaataaatgatgaggatggtg---tgcacaaacgttatgcttctccctca 119
             |||| |||| |||||||||||| || || |   |||| ||||| ||| ||||||| |||
Sbjct: 1621 gtacaaaggataataaatgatgaagacgggggcctgcagaaacggtatccttctccatca 1680

                                                                        
Query: 120  ctccgtgagaaggttctgcagccttctcgtacttcatctcatgcaagtgccactcacatg 179
             | |||||||||| | | || | ||||| | ||||||||||||||||||  || ||  | 
Sbjct: 1681 ttgcgtgagaagggtgtccaactttctcatgcttcatctcatgcaagtggtacacattta 1740

                                                                    
Query: 180  cctggatatggcacttcagctattgttgcaatggacaagagtgcagctatttcttc 235
             | |||||  ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1741 gccggatacagcacttcagctattgttgcgatggacaagagtgcagctatttcttc 1796
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>dbj|AK120120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025O20, full
            insert sequence
          Length = 4796

 Score =  147 bits (74), Expect = 2e-32
 Identities = 196/236 (83%), Gaps = 3/236 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    atgttcacaaagacatggcctgagcgctcccgccgtctttttatgcaatttgatcctgct 62
            |||||||| |||||||||||||||||||| || || |||||||||  |||||||||||| 
Sbjct: 1560 atgttcaccaagacatggcctgagcgctcacgtcggctttttatgtcatttgatcctgca 1619

                                                                        
Query: 63   atacagaggacaataaatgatgaggatggtg---tgcacaaacgttatgcttctccctca 119
             |||| |||| |||||||||||| || || |   |||| ||||| ||| ||||||| |||
Sbjct: 1620 gtacaaaggataataaatgatgaagacgggggcctgcagaaacggtatccttctccatca 1679

                                                                        
Query: 120  ctccgtgagaaggttctgcagccttctcgtacttcatctcatgcaagtgccactcacatg 179
             | |||||||||| | | || | ||||| | ||||||||||||||||||  || ||  | 
Sbjct: 1680 ttgcgtgagaagggtgtccaactttctcatgcttcatctcatgcaagtggtacacattta 1739

                                                                    
Query: 180  cctggatatggcacttcagctattgttgcaatggacaagagtgcagctatttcttc 235
             | |||||  ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1740 gccggatacagcacttcagctattgttgcgatggacaagagtgcagctatttcttc 1795
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>dbj|AK067382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102B13, full
            insert sequence
          Length = 4538

 Score =  147 bits (74), Expect = 2e-32
 Identities = 196/236 (83%), Gaps = 3/236 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    atgttcacaaagacatggcctgagcgctcccgccgtctttttatgcaatttgatcctgct 62
            |||||||| |||||||||||||||||||| || || |||||||||  |||||||||||| 
Sbjct: 1561 atgttcaccaagacatggcctgagcgctcacgtcggctttttatgtcatttgatcctgca 1620

                                                                        
Query: 63   atacagaggacaataaatgatgaggatggtg---tgcacaaacgttatgcttctccctca 119
             |||| |||| |||||||||||| || || |   |||| ||||| ||| ||||||| |||
Sbjct: 1621 gtacaaaggataataaatgatgaagacgggggcctgcagaaacggtatccttctccatca 1680

                                                                        
Query: 120  ctccgtgagaaggttctgcagccttctcgtacttcatctcatgcaagtgccactcacatg 179
             | |||||||||| | | || | ||||| | ||||||||||||||||||  || ||  | 
Sbjct: 1681 ttgcgtgagaagggtgtccaactttctcatgcttcatctcatgcaagtggtacacattta 1740

                                                                    
Query: 180  cctggatatggcacttcagctattgttgcaatggacaagagtgcagctatttcttc 235
             | |||||  ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1741 gccggatacagcacttcagctattgttgcgatggacaagagtgcagctatttcttc 1796
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>ref|XM_473109.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4233

 Score =  143 bits (72), Expect = 3e-31
 Identities = 140/162 (86%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                        
Query: 10   caaagacatggcctgagcgctcccgccgtctttttatgcaatttgatcctgctatacaga 69
            ||||||||||||||||||| || || || |||||||||  ||||||||||||||||||||
Sbjct: 1439 caaagacatggcctgagcgttcacgtcggctttttatgtcatttgatcctgctatacaga 1498

                                                                        
Query: 70   ggacaataaatgatgaggat---ggtgtgcacaaacgttatgcttctccctcactccgtg 126
            |||| ||||| ||||| |||   ||||||||||| || |||||||| ||||| || ||||
Sbjct: 1499 ggactataaacgatgaagatgggggtgtgcacaagcggtatgcttcaccctctcttcgtg 1558

                                                      
Query: 127  agaaggttctgcagccttctcgtacttcatctcatgcaagtg 168
            ||| |||| |||||||||||||| ||| ||| ||||||||||
Sbjct: 1559 agagggttgtgcagccttctcgttctttatcacatgcaagtg 1600



 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                        
Query: 182  tggatatggcacttcagctattgttgcaatggacaagagtgcagctatttcttcagatac 241
            ||||||||||||||||||||||||||| |||||||| | ||| ||||||||||||||| |
Sbjct: 1614 tggatatggcacttcagctattgttgctatggacaaaactgctgctatttcttcagattc 1673

               
Query: 242  atc 244
            |||
Sbjct: 1674 atc 1676
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>dbj|AK067306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100C22, full
            insert sequence
          Length = 5032

 Score =  143 bits (72), Expect = 3e-31
 Identities = 140/162 (86%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                        
Query: 10   caaagacatggcctgagcgctcccgccgtctttttatgcaatttgatcctgctatacaga 69
            ||||||||||||||||||| || || || |||||||||  ||||||||||||||||||||
Sbjct: 1589 caaagacatggcctgagcgttcacgtcggctttttatgtcatttgatcctgctatacaga 1648

                                                                        
Query: 70   ggacaataaatgatgaggat---ggtgtgcacaaacgttatgcttctccctcactccgtg 126
            |||| ||||| ||||| |||   ||||||||||| || |||||||| ||||| || ||||
Sbjct: 1649 ggactataaacgatgaagatgggggtgtgcacaagcggtatgcttcaccctctcttcgtg 1708

                                                      
Query: 127  agaaggttctgcagccttctcgtacttcatctcatgcaagtg 168
            ||| |||| |||||||||||||| ||| ||| ||||||||||
Sbjct: 1709 agagggttgtgcagccttctcgttctttatcacatgcaagtg 1750



 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                        
Query: 182  tggatatggcacttcagctattgttgcaatggacaagagtgcagctatttcttcagatac 241
            ||||||||||||||||||||||||||| |||||||| | ||| ||||||||||||||| |
Sbjct: 1764 tggatatggcacttcagctattgttgctatggacaaaactgctgctatttcttcagattc 1823

               
Query: 242  atc 244
            |||
Sbjct: 1824 atc 1826
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 118/142 (83%)
 Strand = Plus / Minus

                                                                            
Query: 94       tgcacaaacgttatgcttctccctcactccgtgagaaggttctgcagccttctcgtactt 153
                |||| ||||| ||| ||||||| ||| | |||||||||| | | || | ||||| | |||
Sbjct: 24513763 tgcagaaacggtatccttctccatcattgcgtgagaagggtgtccaactttctcatgctt 24513704

                                                                            
Query: 154      catctcatgcaagtgccactcacatgcctggatatggcacttcagctattgttgcaatgg 213
                |||||||||||||||  || ||  |  | |||||  ||||||||||||||||||| ||||
Sbjct: 24513703 catctcatgcaagtggtacacatttagccggatacagcacttcagctattgttgcgatgg 24513644

                                      
Query: 214      acaagagtgcagctatttcttc 235
                ||||||||||||||||||||||
Sbjct: 24513643 acaagagtgcagctatttcttc 24513622



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 3        atgttcacaaagacatggcctgagcgctcccgccgtctttttatgcaatttgatcctgc 61
                |||||||| |||||||||||||||||||| || || |||||||||  ||||||||||||
Sbjct: 24514816 atgttcaccaagacatggcctgagcgctcacgtcggctttttatgtcatttgatcctgc 24514758
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>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1014_H03
          Length = 132696

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 118/142 (83%)
 Strand = Plus / Minus

                                                                         
Query: 94    tgcacaaacgttatgcttctccctcactccgtgagaaggttctgcagccttctcgtactt 153
             |||| ||||| ||| ||||||| ||| | |||||||||| | | || | ||||| | |||
Sbjct: 27864 tgcagaaacggtatccttctccatcattgcgtgagaagggtgtccaactttctcatgctt 27805

                                                                         
Query: 154   catctcatgcaagtgccactcacatgcctggatatggcacttcagctattgttgcaatgg 213
             |||||||||||||||  || ||  |  | |||||  ||||||||||||||||||| ||||
Sbjct: 27804 catctcatgcaagtggtacacatttagccggatacagcacttcagctattgttgcgatgg 27745

                                   
Query: 214   acaagagtgcagctatttcttc 235
             ||||||||||||||||||||||
Sbjct: 27744 acaagagtgcagctatttcttc 27723



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 3     atgttcacaaagacatggcctgagcgctcccgccgtctttttatgcaatttgatcctgc 61
             |||||||| |||||||||||||||||||| || || |||||||||  ||||||||||||
Sbjct: 28917 atgttcaccaagacatggcctgagcgctcacgtcggctttttatgtcatttgatcctgc 28859
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>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11,
              complete sequence
          Length = 143582

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                          
Query: 182    tggatatggcacttcagctattgttgcaatggacaagagtgcagctatttcttcagatac 241
              ||||||||||||||||||||||||||| |||||||| | ||| ||||||||||||||| |
Sbjct: 112757 tggatatggcacttcagctattgttgctatggacaaaactgctgctatttcttcagattc 112698

                 
Query: 242    atc 244
              |||
Sbjct: 112697 atc 112695



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                          
Query: 90     ggtgtgcacaaacgttatgcttctccctcactccgtgagaaggttctgcagccttctcgt 149
              ||||||||||| || |||||||| ||||| || ||||||| |||| ||||||||||||||
Sbjct: 112849 ggtgtgcacaagcggtatgcttcaccctctcttcgtgagagggttgtgcagccttctcgt 112790

                                 
Query: 150    acttcatctcatgcaagtg 168
               ||| ||| ||||||||||
Sbjct: 112789 tctttatcacatgcaagtg 112771



 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                          
Query: 10     caaagacatggcctgagcgctcccgccgtctttttatgcaatttgatcctgctatacaga 69
              ||||||||||||||||||| || || || |||||||||  ||||||||||||||||||||
Sbjct: 113031 caaagacatggcctgagcgttcacgtcggctttttatgtcatttgatcctgctatacaga 112972

                
Query: 70     gg 71
              ||
Sbjct: 112971 gg 112970
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>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
             complete sequence
          Length = 164577

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                         
Query: 182   tggatatggcacttcagctattgttgcaatggacaagagtgcagctatttcttcagatac 241
             ||||||||||||||||||||||||||| |||||||| | ||| ||||||||||||||| |
Sbjct: 55377 tggatatggcacttcagctattgttgctatggacaaaactgctgctatttcttcagattc 55318

                
Query: 242   atc 244
             |||
Sbjct: 55317 atc 55315



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                         
Query: 90    ggtgtgcacaaacgttatgcttctccctcactccgtgagaaggttctgcagccttctcgt 149
             ||||||||||| || |||||||| ||||| || ||||||| |||| ||||||||||||||
Sbjct: 55469 ggtgtgcacaagcggtatgcttcaccctctcttcgtgagagggttgtgcagccttctcgt 55410

                                
Query: 150   acttcatctcatgcaagtg 168
              ||| ||| ||||||||||
Sbjct: 55409 tctttatcacatgcaagtg 55391



 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 10    caaagacatggcctgagcgctcccgccgtctttttatgcaatttgatcctgctatacaga 69
             ||||||||||||||||||| || || || |||||||||  ||||||||||||||||||||
Sbjct: 55651 caaagacatggcctgagcgttcacgtcggctttttatgtcatttgatcctgctatacaga 55592

               
Query: 70    gg 71
             ||
Sbjct: 55591 gg 55590
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                            
Query: 182      tggatatggcacttcagctattgttgcaatggacaagagtgcagctatttcttcagatac 241
                ||||||||||||||||||||||||||| |||||||| | ||| ||||||||||||||| |
Sbjct: 25328818 tggatatggcacttcagctattgttgctatggacaaaactgctgctatttcttcagattc 25328759

                   
Query: 242      atc 244
                |||
Sbjct: 25328758 atc 25328756



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                            
Query: 90       ggtgtgcacaaacgttatgcttctccctcactccgtgagaaggttctgcagccttctcgt 149
                ||||||||||| || |||||||| ||||| || ||||||| |||| ||||||||||||||
Sbjct: 25328910 ggtgtgcacaagcggtatgcttcaccctctcttcgtgagagggttgtgcagccttctcgt 25328851

                                   
Query: 150      acttcatctcatgcaagtg 168
                 ||| ||| ||||||||||
Sbjct: 25328850 tctttatcacatgcaagtg 25328832



 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                            
Query: 10       caaagacatggcctgagcgctcccgccgtctttttatgcaatttgatcctgctatacaga 69
                ||||||||||||||||||| || || || |||||||||  ||||||||||||||||||||
Sbjct: 25329092 caaagacatggcctgagcgttcacgtcggctttttatgtcatttgatcctgctatacaga 25329033

                  
Query: 70       gg 71
                ||
Sbjct: 25329032 gg 25329031
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>ref|XM_948494.1| Theileria annulata strain Ankara hypothetical protein (TA09600)
            partial mRNA
          Length = 2940

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 176  catgcctggatatggcacttc 196
            |||||||||||||||||||||
Sbjct: 2692 catgcctggatatggcacttc 2712
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>ref|XM_649989.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (37.t00008)
          partial mRNA
          Length = 1002

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 45 atgcaatttgatcctgctatacag 68
          ||||||||||||||| ||||||||
Sbjct: 55 atgcaatttgatcctcctatacag 78
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>gb|AC069560.26| Mus musculus strain 129/Sv clone ct7-22f10 map 2, complete sequence
          Length = 118824

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   gaaggttctgcagccttctc 147
             ||||||||||||||||||||
Sbjct: 39281 gaaggttctgcagccttctc 39300
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    cgctgccaacaaaccatctt 263
              ||||||||||||||||||||
Sbjct: 536788 cgctgccaacaaaccatctt 536769
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>gb|AC013543.16| Homo sapiens chromosome 8, clone RP11-317H6, complete sequence
          Length = 177777

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 169    ccactcacatgcctggatatggca 192
              ||||||||| ||||||||||||||
Sbjct: 119880 ccactcacaggcctggatatggca 119903
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>gb|AC023866.8| Homo sapiens chromosome 8, clone RP11-787D18, complete sequence
          Length = 180486

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 169    ccactcacatgcctggatatggca 192
              ||||||||| ||||||||||||||
Sbjct: 149702 ccactcacaggcctggatatggca 149679
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>gb|AC007668.7| Drosophila melanogaster, chromosome 3R, region 87C-87C, BAC clone
             BACR02G11, complete sequence
          Length = 167239

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   tcacatgcctggatatggca 192
             ||||||||||||||||||||
Sbjct: 29445 tcacatgcctggatatggca 29426
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>gb|AC007594.5| Drosophila melanogaster, chromosome 3R, region 87B-87C, BAC clone
              BACR28I14, complete sequence
          Length = 161601

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    tcacatgcctggatatggca 192
              ||||||||||||||||||||
Sbjct: 136382 tcacatgcctggatatggca 136363
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>gb|AC008226.10|AC008226 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone
             BACR02B19, complete sequence
          Length = 171286

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   tcacatgcctggatatggca 192
             ||||||||||||||||||||
Sbjct: 68996 tcacatgcctggatatggca 68977
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>gb|AC019211.6| Homo sapiens BAC clone RP11-454J11 from 2, complete sequence
          Length = 167471

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    gagtgcagctatttcttcag 237
              ||||||||||||||||||||
Sbjct: 166370 gagtgcagctatttcttcag 166389
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>gb|AC019051.8| Homo sapiens BAC clone RP11-92L24 from 2, complete sequence
          Length = 137248

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gagtgcagctatttcttcag 237
           ||||||||||||||||||||
Sbjct: 899 gagtgcagctatttcttcag 918
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>emb|BX649317.5| Mouse DNA sequence from clone RP23-415G15 on chromosome 2, complete
              sequence
          Length = 199584

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    gaaggttctgcagccttctc 147
              ||||||||||||||||||||
Sbjct: 145578 gaaggttctgcagccttctc 145559
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>gb|AE003696.3| Drosophila melanogaster chromosome 3R, section 34 of 118 of the
             complete sequence
          Length = 265467

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   tcacatgcctggatatggca 192
             ||||||||||||||||||||
Sbjct: 65045 tcacatgcctggatatggca 65026
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>gb|AE003672.4| Drosophila melanogaster chromosome 3R, section 12 of 118 of the complete
              sequence
          Length = 301379

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    tcacatgcctggatatggca 192
              ||||||||||||||||||||
Sbjct: 266776 tcacatgcctggatatggca 266757
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>gb|AC113498.9| Mus musculus chromosome 1, clone RP23-366N18, complete sequence
          Length = 206252

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     tctttttatgcaatttgatc 57
              ||||||||||||||||||||
Sbjct: 150644 tctttttatgcaatttgatc 150625
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>gb|CP000186.1| Drosophila melanogaster genomic scaffold 211000022280663
          Length = 77965

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  tcacatgcctggatatggca 192
            ||||||||||||||||||||
Sbjct: 7919 tcacatgcctggatatggca 7900
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>emb|X14037.1|DMDM11 D.melanogaster micropia-Dm11 retrotransposon
          Length = 5465

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  tcacatgcctggatatggca 192
            ||||||||||||||||||||
Sbjct: 2171 tcacatgcctggatatggca 2190
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>emb|X15066.1|DMMC3DM2 Drosophila retroposon microcopia Dm-2 3'end
          Length = 5455

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  tcacatgcctggatatggca 192
            ||||||||||||||||||||
Sbjct: 2040 tcacatgcctggatatggca 2059


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,441,068
Number of Sequences: 3902068
Number of extensions: 2441068
Number of successful extensions: 40076
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39997
Number of HSP's gapped (non-prelim): 74
length of query: 276
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 254
effective length of database: 17,147,199,772
effective search space: 4355388742088
effective search space used: 4355388742088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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