>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 171  DCSFCGKHLHCGCVASKNSFDLLDSGGVQCMNCMKNPG 284
            DC  CG+ +H  CV     +D++   G  C NC+K  G
Sbjct: 1283 DCKECGRKMHQICVLH---YDIIWPSGFVCDNCLKKTG 1317

>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 171  DCSFCGKHLHCGCVASKNSFDLLDSGGVQCMNCMKNPG 284
            DC  CG+ +H  CV     +D++   G  C NC+K  G
Sbjct: 1282 DCKECGRKMHQICVLH---YDIIWPSGFVCDNCLKKTG 1316

>CASC5_MOUSE (Q66JQ7) Protein CASC5 (Cancer susceptibility candidate gene 5|
            protein homolog)
          Length = 1612

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 29/99 (29%), Positives = 41/99 (41%)
 Frame = +3

Query: 123  CSLFCDIFHQKESGWRDCSFCGKHLHCGCVASKNSFDLLDSGGVQCMNCMKNPGVQSVTV 302
            CSL   IF  K    R CS  G       +A       L++  V    C K+PG+ SV  
Sbjct: 1463 CSL--GIFLPKLPSKRSCSITGVDDLEQILADAADLTQLETQPV----CSKDPGIGSVAA 1516

Query: 303  SCQVAPKLFLSPQNNQRLFGKSDELLPGRPLESPSLMLD 419
               ++P  F++ +N          + PG  L S S+ LD
Sbjct: 1517 KLNLSPSQFINEENL--------PVYPGEILSSDSVSLD 1547

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
           (ALL1-related protein)
          Length = 5262

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
 Frame = +3

Query: 114 CVGCSLFCDIFHQKESGWRDCSFCGKHLHCGCVASKNSFDLLDSGGVQCMNC-----MKN 278
           C G    CD+F         C+ CG H H  C+    +       G QC  C      + 
Sbjct: 232 CEGPGELCDLFF--------CTSCGHHYHGACL--DTALTARKRAGWQCPECKVCQACRK 281

Query: 279 PGVQSVTVSCQVAPK 323
           PG  S  + C+   K
Sbjct: 282 PGNDSKMLVCETCDK 296

>LIN23_CAEEL (Q09990) F-box/WD-repeat protein lin-23 (Abnormal cell lineage|
           protein 23)
          Length = 665

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
 Frame = -1

Query: 244 LSSRSKEFFEATQPQWRCLPQN--------EQSLQPDSFWWNMSQKRE 125
           ++S S +  E     WRC            E++++ DS WW +S+KR+
Sbjct: 99  VNSDSLKSCEEVSTSWRCALARGQHWKKLIEKNVRSDSLWWGLSEKRQ 146

>ASR1_ASHGO (Q75DC2) Alcohol-sensitive RING finger protein 1|
          Length = 328

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 105 HRSCVGCSLFCDIFHQKESGWRDCSFCGKHL 197
           H SC+G  L  ++  ++E GW  C FC + L
Sbjct: 151 HHSCLG-QLLVEVNAEREQGWSHCIFCYEQL 180

>DYHC_NEUCR (P45443) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4367

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
 Frame = -2

Query: 429  HFWNR---A*GTVTPTVYLATIHRFYQRVSGYFEE---IKKALEPLDM 304
            H WN      GT+ P V  AT+  F QR++   EE   + KA E LD+
Sbjct: 1306 HQWNEEKPVSGTIAPDVASATLTHFEQRITKLQEESAMVAKAKEALDL 1353

>DAZ1_CAEEL (Q20870) DAZ protein 1|
          Length = 499

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 249 LRYRVDQRNSSKQHNRNGDACHKTNSPSNQTP 154
           LRY+ DQ+N   Q N++  A H+  S   QTP
Sbjct: 6   LRYQKDQQNQQHQQNQSQQAAHQMVSFMPQTP 37

>IF2_LACPL (Q88VK7) Translation initiation factor IF-2|
          Length = 858

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 234 DQRNSSKQHNRNGDACHKTNSPSNQTPFGGICRRRESNRRT 112
           +  N S  +NR+  + ++TNS  N+T  GG  + R +NR T
Sbjct: 155 NNNNRSNNNNRSNTSNNRTNSTGNRTNNGG--QNRNNNRTT 193

>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein|
           Mel-18) (RING finger protein 110) (Zinc finger protein
           144) (Zfp-144)
          Length = 342

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 20/50 (40%), Positives = 22/50 (44%)
 Frame = +1

Query: 25  SFLPSPHLFLVLAFPSLGLPAPHAPAATDRASVALSSATYSTKRSLVGGT 174
           S LPSP      A PS G P+ H P AT   S    S    T  +  GGT
Sbjct: 274 SSLPSP------ATPSHGSPSSHGPPATHPTSPTPPSTAAGTTTATNGGT 317

>JHD1B_XENLA (Q640I9) JmjC domain-containing histone demethylation protein 1B|
           (EC 1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
           leucine-rich repeat protein 10)
          Length = 1259

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 171 DCSFCGKHLHCGCVASKNSFDLLDSGGVQCMNCMK 275
           +CS C + +H GC+ +K S  +++     C  C K
Sbjct: 648 ECSICNEIIHPGCLKTKESDGVVNDELPNCWECPK 682

>WHITE_LUCCU (Q05360) Protein white|
          Length = 677

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 25/73 (34%), Positives = 34/73 (46%)
 Frame = +1

Query: 13  ASIPSFLPSPHLFLVLAFPSLGLPAPHAPAATDRASVALSSATYSTKRSLVGGTVRFVAS 192
           A +P FL  P LF+ +A+P +GL     P  T   S AL+  T     S   G +   AS
Sbjct: 504 AELPLFLVVPFLFIAIAYPMIGL----RPGITHFLS-ALALVTLVANVSTSFGYLISCAS 558

Query: 193 ISIAVVLLRRIPL 231
            S ++ L    PL
Sbjct: 559 TSTSMALSVGPPL 571

>FHAB_BORPE (P12255) Filamentous hemagglutinin|
          Length = 3590

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
 Frame = +3

Query: 300  VSCQVAPKLFLSP------QNNQRLFGKSDELLPGRPLESPSLMLDSRNDDIAI 443
            VS +VA KLFL+        NN+ + G+  +++ GRP  + ++  ++R D+  +
Sbjct: 1166 VSVKVAKKLFLNGTLRAVNDNNETMSGRQIDVVDGRPQITDAVTGEARKDESVV 1219

>TILS_LACLA (Q9CJH4) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 423

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -2

Query: 369 RFYQRVSGYFEEIKKALEPLDMKQSQIELLDFSCNS 262
           +F Q +S    EIKKAL  ++ K S++E++D   +S
Sbjct: 204 QFSQSISDLSSEIKKALAVINQKISELEIVDEKISS 239

>RL15_BACTN (Q8A495) 50S ribosomal protein L15|
          Length = 148

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 80 KPSEGKARTRKRWGEGRKEGMDARSS 3
          KP+EG  +TRKR G G   G+   S+
Sbjct: 7  KPAEGSTKTRKRIGRGAGSGLGGTST 32

>NO22_SOYBN (P08961) Nodulin 22 precursor (N-22)|
          Length = 215

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +3

Query: 252 VQCMNCMKNPGVQ-SVTVSCQVAPKLFLSPQNNQRLFGKSDELLPGRPLESPSLML 416
           V    C+  P V  SV  +C       L P  NQ ++  +D   PG PLE P +++
Sbjct: 165 VSAQFCLTAPNVDTSVLPAC-------LGPSLNQCVYPAADAFTPGPPLELPPIII 213

>RNBP6_HUMAN (O60518) Ran-binding protein 6 (RanBP6)|
          Length = 1105

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 255 QCMNCMKNPGVQSVTVSCQVAPKLFLSPQNNQRLFGKSDELLPG 386
           QC+   ++P ++  T+S + A    L+ +NN  LF    +LLPG
Sbjct: 187 QCIQDQEHPAIR--TLSARAAAAFVLANENNIALFKDFADLLPG 228

>NO27_SOYBN (P08864) Nodulin 27 precursor (N-27)|
          Length = 213

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 267 CMKNPGVQ-SVTVSCQVAPKLFLSPQNNQRLFGKSDELLPGRPLESPSLML 416
           C+  P V  SV  +C       L P  NQ ++  +D   PG PLE P +++
Sbjct: 168 CLSAPNVDTSVLPAC-------LGPSLNQCVYPAADAFTPGPPLELPPIII 211

>LHX8_MOUSE (O35652) LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3)|
          Length = 367

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 102 RHRSCV--GCSLFCDIFHQKESGWRDCSFCGKHLH 200
           RH SC      +FC + + +  G R CS CG+H+H
Sbjct: 132 RHTSCYIKDKDIFCKLDYFRRYGTR-CSRCGRHIH 165

>RL15_BACFR (Q64NM7) 50S ribosomal protein L15|
          Length = 148

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 80 KPSEGKARTRKRWGEGRKEGMDARSS 3
          KP+EG  +TRKR G G   G+   S+
Sbjct: 7  KPAEGSTKTRKRIGRGPGSGLGGTST 32

>RL15_BACFN (Q5L8C8) 50S ribosomal protein L15|
          Length = 148

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 80 KPSEGKARTRKRWGEGRKEGMDARSS 3
          KP+EG  +TRKR G G   G+   S+
Sbjct: 7  KPAEGSTKTRKRIGRGPGSGLGGTST 32

>TMM66_PONPY (Q5R491) Transmembrane protein 66 precursor|
          Length = 339

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
 Frame = +1

Query: 43  HLFLVLAFPSLGLPAPHAPAATDRASVALSSATYSTKRSL--------VGGT 174
           HLFL+ A P+LG   P      D  ++ L    Y+T R L        VGGT
Sbjct: 19  HLFLLTAGPALGWNDPECMLLRDVKALTLHYDRYTTSRRLDPIPQLKCVGGT 70

>GON4L_HUMAN (Q3T8J9) GON-4-like protein (GON-4 homolog)|
          Length = 2241

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +1

Query: 16   SIPSFLPSPHLFLVLAFPSLGLPAPHAPAATDRASVALSSATYSTKRSLVGGTVR 180
            ++ S LPSP    V     L  P PH+P  T +      +  Y+ KR+ VG  VR
Sbjct: 1951 AVGSTLPSPREVTVTERLLLDGPPPHSP-ETPQFPPTTGAVLYTVKRNQVGPEVR 2004

>FOX2_YEAST (Q02207) Peroxisomal hydratase-dehydrogenase-epimerase (HDE)|
           (Multifunctional beta-oxidation protein) (MFP)
           [Includes: 2-enoyl-CoA hydratase (EC 4.2.1.-);
           D-3-hydroxyacyl CoA dehydrogenase (EC 1.1.1.-)]
          Length = 900

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -2

Query: 363 YQRVSGYFEEIKKALEPLDMKQSQIELLDFSCNS 262
           +QR SGY   IK+ +EP ++K++   + DFS N+
Sbjct: 561 WQRSSGYVS-IKETIEPEEIKENWNHITDFSRNT 593

>PAD1_YEAST (P33751) Phenylacrylic acid decarboxylase (EC 4.1.1.-) (PAD)|
          Length = 242

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +2

Query: 116 RRLLSLLRHIPPKGVWLEGLFVLWQASPLRLCCFEEFL*STR*RRSSMHELHEKSRSSIC 295
           R+LL + R  P   + LE +  L +A  +       F      R  S+H+L E+S   I 
Sbjct: 168 RKLLLVTRETPLSSIHLENMLSLCRAGVIIFPPVPAFYT----RPKSLHDLLEQSVGRIL 223

Query: 296 DCF 304
           DCF
Sbjct: 224 DCF 226

>JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylation protein 1B|
           (EC 1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
           leucine-rich repeat protein 10) (F-box protein FBL10)
           (Protein JEMMA) (Jumonji containing domain
           EMSY-interactor methyltr
          Length = 1336

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 171 DCSFCGKHLHCGCVASKNSFDLLDSGGVQCMNCMK 275
           +CS C + +H GC+  K S  +++     C  C K
Sbjct: 687 ECSICNEIIHPGCLKIKESEGVVNDELPNCWECPK 721

>ARY_ANTPE (Q7Z1F8) Arylphorin precursor|
          Length = 704

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 378 TIHRFYQRVSGYFEEIKKALEP 313
           T ++ Y R+ GYF + K+ LEP
Sbjct: 427 TFYQLYNRIIGYFNQFKQYLEP 448

>JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylation protein 1B|
           (EC 1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
           leucine-rich repeat protein 10) (F-box protein FBL10)
          Length = 1309

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 171 DCSFCGKHLHCGCVASKNSFDLLDSGGVQCMNCMK 275
           +CS C + +H GC+  K S  +++     C  C K
Sbjct: 660 ECSICNEIIHPGCLKIKESEGVVNDELPNCWECPK 694


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,792,288
Number of Sequences: 219361
Number of extensions: 1457052
Number of successful extensions: 5245
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5242
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)