Clone Name | bastl43g10 |
---|---|
Clone Library Name | barley_pub |
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 41.2 bits (95), Expect = 7e-04 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = +3 Query: 132 MLLHGLVDRLTGKNKEAWKEGKIR 203 M + G DRLTG+NKEAWKEG+IR Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIR 24
>ZN205_HUMAN (O95201) Zinc finger protein 205 (Zinc finger protein 210)| Length = 504 Score = 30.4 bits (67), Expect = 1.3 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +3 Query: 12 HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 143 H CP CAKC ++ + TH R + PC C +R ++ H Sbjct: 370 HKCPICAKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 416
>ZN449_HUMAN (Q6P9G9) Zinc finger protein 449 (Zinc finger and SCAN| domain-containing protein 19) Length = 518 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Frame = +3 Query: 12 HHCPPCAKCI---SKGTGTHRLCSSCSALPCLRCRTREQRRGEMLLH 143 H CP C KC S+ TG R+ S C C R R ++ H Sbjct: 323 HRCPQCGKCFARKSQLTGHQRIHSGEEPHKCPECGKRFLRSSDLYRH 369
>ZFP13_MOUSE (P10754) Zinc finger protein 13 (Zfp-13) (Krox-8 protein)| Length = 512 Score = 29.3 bits (64), Expect = 2.9 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +3 Query: 12 HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 143 H CP C+KC ++ + TH R + PC C +R ++ H Sbjct: 378 HKCPICSKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 424
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +3 Query: 132 MLLHGLVDRLTGKNKEAWKEGKI 200 MLL GL+D LTG NK A +G + Sbjct: 1 MLLGGLIDTLTGANKSARLKGTV 23
>ARI2_CAEEL (Q22431) Probable protein ariadne-2 (Ari-2)| Length = 482 Score = 28.5 bits (62), Expect = 5.0 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +3 Query: 18 CPPCAKCISKGTGTHRLCSSCSALPCLRCR 107 CP C CI K G C+ + C RCR Sbjct: 287 CPQCHSCIEKAGG-------CNHIQCTRCR 309
>UVRA_RHILO (Q98M36) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 973 Score = 28.1 bits (61), Expect = 6.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -1 Query: 65 PVGACPLADALGTRRAV 15 P GACP D LG++RA+ Sbjct: 293 PFGACPTCDGLGSQRAI 309
>UVRA_BRUSU (Q8G0I9) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 6.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -1 Query: 65 PVGACPLADALGTRRAV 15 P GACP D LGT++A+ Sbjct: 294 PFGACPTCDGLGTQQAI 310
>UVRA_BRUME (Q8YHC4) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 6.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -1 Query: 65 PVGACPLADALGTRRAV 15 P GACP D LGT++A+ Sbjct: 294 PFGACPTCDGLGTQQAI 310
>UVRA_BRUAB (P0C0Z2) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 6.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -1 Query: 65 PVGACPLADALGTRRAV 15 P GACP D LGT++A+ Sbjct: 294 PFGACPTCDGLGTQQAI 310
>UVRA_BRUA2 (Q2YPX5) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 6.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -1 Query: 65 PVGACPLADALGTRRAV 15 P GACP D LGT++A+ Sbjct: 294 PFGACPTCDGLGTQQAI 310
>MT2_CALSI (P55950) Metallothionein-2B (MT-2B) (Metallothionein-IIB) (MT-IIB)| [Contains: Metallothionein-2A (MT-2A) (Metallothionein-IIA) (MT-IIA)] Length = 58 Score = 28.1 bits (61), Expect = 6.6 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Frame = +3 Query: 18 CPPCAKCISKGTGTHR-LCSSCSALPCLRC 104 CPPC KC S+ T + CS + PC C Sbjct: 28 CPPCDKCSSECKCTSKEECSKTCSKPCSCC 57
>SUHW_DROVI (Q08876) Protein suppressor of hairy wing| Length = 899 Score = 28.1 bits (61), Expect = 6.6 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 5/59 (8%) Frame = +3 Query: 9 HHHCPPCAKCISKGTGTHRLCS-----SCSALPCLRCRTREQRRGEMLLHGLVDRLTGK 170 H +CP C K T R SC+ PC C + + + LH +L GK Sbjct: 287 HINCPDCPKSFKTQTSYERHIFITHSWSCNDYPCSICNAKLRSGALLKLHEQQHQLRGK 345
>PML_MOUSE (Q60953) Probable transcription factor PML| Length = 808 Score = 28.1 bits (61), Expect = 6.6 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%) Frame = +3 Query: 18 CPPC---AKCISKGTGTHRLCSSCSALPCLRC 104 CP C AKC H LCS C P L+C Sbjct: 31 CPSCQAQAKCPKLLPCLHTLCSGCLEAPGLQC 62
>SN1L2_MOUSE (Q8CFH6) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) (Salt-inducible kinase 2) Length = 931 Score = 28.1 bits (61), Expect = 6.6 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +2 Query: 8 PPPLPSLCQVHQQGDRHPP 64 PPPLPS Q HQQ PP Sbjct: 811 PPPLPSQLQQHQQPPPPPP 829
>ARI2_HUMAN (O95376) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)| Length = 493 Score = 28.1 bits (61), Expect = 6.6 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%) Frame = +3 Query: 18 CPPCAKCISKGTG-THRLCSSCSALPCLRC 104 CP C CI K G H CS C C C Sbjct: 297 CPKCNICIEKNGGCNHMQCSKCKHDFCWMC 326
>ARI2_MOUSE (Q9Z1K6) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)| (UbcM4-interacting protein 48) Length = 492 Score = 28.1 bits (61), Expect = 6.6 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%) Frame = +3 Query: 18 CPPCAKCISKGTG-THRLCSSCSALPCLRC 104 CP C CI K G H CS C C C Sbjct: 296 CPKCNICIEKNGGCNHMQCSKCKHDFCWMC 325
>ZNF96_MOUSE (Q9Z1D7) Zinc finger protein 96 (Zfp-96)| Length = 501 Score = 27.7 bits (60), Expect = 8.6 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Frame = +3 Query: 9 HHHCPPCAKCISKGTGT-HRLCSSCSALP--CLRCRTREQRRGEMLLH 143 H+HC C K + G H L S P CL+C RR + H Sbjct: 352 HYHCNECGKAFCQKAGLFHHLKSHRRNRPYQCLQCNKSFNRRSTLSQH 399
>MT_ASTFL (P55951) Metallothionein (MT)| Length = 58 Score = 27.7 bits (60), Expect = 8.6 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = +3 Query: 18 CPPCAKCISKGTGTHRLCSSCSALPCLRC 104 C +C + G T +C+SC PC +C Sbjct: 6 CNDVCECAAGGCKTGCVCTSCRCSPCDKC 34 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.309 0.120 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,760,778 Number of Sequences: 219361 Number of extensions: 441105 Number of successful extensions: 1692 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1613 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1689 length of database: 80,573,946 effective HSP length: 43 effective length of database: 71,141,423 effective search space used: 1707394152 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)