ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) 41 7e-04
2ZN205_HUMAN (O95201) Zinc finger protein 205 (Zinc finger protei... 30 1.3
3ZN449_HUMAN (Q6P9G9) Zinc finger protein 449 (Zinc finger and SC... 30 1.7
4ZFP13_MOUSE (P10754) Zinc finger protein 13 (Zfp-13) (Krox-8 pro... 29 2.9
5LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 28 5.0
6ARI2_CAEEL (Q22431) Probable protein ariadne-2 (Ari-2) 28 5.0
7UVRA_RHILO (Q98M36) UvrABC system protein A (UvrA protein) (Exci... 28 6.6
8UVRA_BRUSU (Q8G0I9) UvrABC system protein A (UvrA protein) (Exci... 28 6.6
9UVRA_BRUME (Q8YHC4) UvrABC system protein A (UvrA protein) (Exci... 28 6.6
10UVRA_BRUAB (P0C0Z2) UvrABC system protein A (UvrA protein) (Exci... 28 6.6
11UVRA_BRUA2 (Q2YPX5) UvrABC system protein A (UvrA protein) (Exci... 28 6.6
12MT2_CALSI (P55950) Metallothionein-2B (MT-2B) (Metallothionein-I... 28 6.6
13SUHW_DROVI (Q08876) Protein suppressor of hairy wing 28 6.6
14PML_MOUSE (Q60953) Probable transcription factor PML 28 6.6
15SN1L2_MOUSE (Q8CFH6) Serine/threonine-protein kinase SNF1-like k... 28 6.6
16ARI2_HUMAN (O95376) Protein ariadne-2 homolog (ARI-2) (Triad1 pr... 28 6.6
17ARI2_MOUSE (Q9Z1K6) Protein ariadne-2 homolog (ARI-2) (Triad1 pr... 28 6.6
18ZNF96_MOUSE (Q9Z1D7) Zinc finger protein 96 (Zfp-96) 28 8.6
19MT_ASTFL (P55951) Metallothionein (MT) 28 8.6

>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +3

Query: 132 MLLHGLVDRLTGKNKEAWKEGKIR 203
           M + G  DRLTG+NKEAWKEG+IR
Sbjct: 1   MQVQGFFDRLTGRNKEAWKEGRIR 24



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>ZN205_HUMAN (O95201) Zinc finger protein 205 (Zinc finger protein 210)|
          Length = 504

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +3

Query: 12  HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 143
           H CP CAKC ++ +   TH R  +     PC  C     +R  ++ H
Sbjct: 370 HKCPICAKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 416



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>ZN449_HUMAN (Q6P9G9) Zinc finger protein 449 (Zinc finger and SCAN|
           domain-containing protein 19)
          Length = 518

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +3

Query: 12  HHCPPCAKCI---SKGTGTHRLCSSCSALPCLRCRTREQRRGEMLLH 143
           H CP C KC    S+ TG  R+ S      C  C  R  R  ++  H
Sbjct: 323 HRCPQCGKCFARKSQLTGHQRIHSGEEPHKCPECGKRFLRSSDLYRH 369



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>ZFP13_MOUSE (P10754) Zinc finger protein 13 (Zfp-13) (Krox-8 protein)|
          Length = 512

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +3

Query: 12  HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 143
           H CP C+KC ++ +   TH R  +     PC  C     +R  ++ H
Sbjct: 378 HKCPICSKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 424



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>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 132 MLLHGLVDRLTGKNKEAWKEGKI 200
           MLL GL+D LTG NK A  +G +
Sbjct: 1   MLLGGLIDTLTGANKSARLKGTV 23



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>ARI2_CAEEL (Q22431) Probable protein ariadne-2 (Ari-2)|
          Length = 482

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 18  CPPCAKCISKGTGTHRLCSSCSALPCLRCR 107
           CP C  CI K  G       C+ + C RCR
Sbjct: 287 CPQCHSCIEKAGG-------CNHIQCTRCR 309



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>UVRA_RHILO (Q98M36) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 973

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 65  PVGACPLADALGTRRAV 15
           P GACP  D LG++RA+
Sbjct: 293 PFGACPTCDGLGSQRAI 309



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>UVRA_BRUSU (Q8G0I9) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 974

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 65  PVGACPLADALGTRRAV 15
           P GACP  D LGT++A+
Sbjct: 294 PFGACPTCDGLGTQQAI 310



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>UVRA_BRUME (Q8YHC4) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 974

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 65  PVGACPLADALGTRRAV 15
           P GACP  D LGT++A+
Sbjct: 294 PFGACPTCDGLGTQQAI 310



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>UVRA_BRUAB (P0C0Z2) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 974

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 65  PVGACPLADALGTRRAV 15
           P GACP  D LGT++A+
Sbjct: 294 PFGACPTCDGLGTQQAI 310



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>UVRA_BRUA2 (Q2YPX5) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 974

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 65  PVGACPLADALGTRRAV 15
           P GACP  D LGT++A+
Sbjct: 294 PFGACPTCDGLGTQQAI 310



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>MT2_CALSI (P55950) Metallothionein-2B (MT-2B) (Metallothionein-IIB) (MT-IIB)|
           [Contains: Metallothionein-2A (MT-2A)
           (Metallothionein-IIA) (MT-IIA)]
          Length = 58

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +3

Query: 18  CPPCAKCISKGTGTHR-LCSSCSALPCLRC 104
           CPPC KC S+   T +  CS   + PC  C
Sbjct: 28  CPPCDKCSSECKCTSKEECSKTCSKPCSCC 57



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>SUHW_DROVI (Q08876) Protein suppressor of hairy wing|
          Length = 899

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
 Frame = +3

Query: 9   HHHCPPCAKCISKGTGTHRLCS-----SCSALPCLRCRTREQRRGEMLLHGLVDRLTGK 170
           H +CP C K     T   R        SC+  PC  C  + +    + LH    +L GK
Sbjct: 287 HINCPDCPKSFKTQTSYERHIFITHSWSCNDYPCSICNAKLRSGALLKLHEQQHQLRGK 345



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>PML_MOUSE (Q60953) Probable transcription factor PML|
          Length = 808

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
 Frame = +3

Query: 18  CPPC---AKCISKGTGTHRLCSSCSALPCLRC 104
           CP C   AKC       H LCS C   P L+C
Sbjct: 31  CPSCQAQAKCPKLLPCLHTLCSGCLEAPGLQC 62



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>SN1L2_MOUSE (Q8CFH6) Serine/threonine-protein kinase SNF1-like kinase 2 (EC|
           2.7.11.1) (Salt-inducible kinase 2)
          Length = 931

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +2

Query: 8   PPPLPSLCQVHQQGDRHPP 64
           PPPLPS  Q HQQ    PP
Sbjct: 811 PPPLPSQLQQHQQPPPPPP 829



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>ARI2_HUMAN (O95376) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)|
          Length = 493

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = +3

Query: 18  CPPCAKCISKGTG-THRLCSSCSALPCLRC 104
           CP C  CI K  G  H  CS C    C  C
Sbjct: 297 CPKCNICIEKNGGCNHMQCSKCKHDFCWMC 326



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>ARI2_MOUSE (Q9Z1K6) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)|
           (UbcM4-interacting protein 48)
          Length = 492

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = +3

Query: 18  CPPCAKCISKGTG-THRLCSSCSALPCLRC 104
           CP C  CI K  G  H  CS C    C  C
Sbjct: 296 CPKCNICIEKNGGCNHMQCSKCKHDFCWMC 325



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>ZNF96_MOUSE (Q9Z1D7) Zinc finger protein 96 (Zfp-96)|
          Length = 501

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
 Frame = +3

Query: 9   HHHCPPCAKCISKGTGT-HRLCSSCSALP--CLRCRTREQRRGEMLLH 143
           H+HC  C K   +  G  H L S     P  CL+C     RR  +  H
Sbjct: 352 HYHCNECGKAFCQKAGLFHHLKSHRRNRPYQCLQCNKSFNRRSTLSQH 399



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>MT_ASTFL (P55951) Metallothionein (MT)|
          Length = 58

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 18  CPPCAKCISKGTGTHRLCSSCSALPCLRC 104
           C    +C + G  T  +C+SC   PC +C
Sbjct: 6   CNDVCECAAGGCKTGCVCTSCRCSPCDKC 34


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.309    0.120    0.340 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,760,778
Number of Sequences: 219361
Number of extensions: 441105
Number of successful extensions: 1692
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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