Clone Name | bastl43g09 |
---|---|
Clone Library Name | barley_pub |
>gb|AF035820.1|AF035820 Hordeum vulgare gibberellin action negative regulator SPY mRNA, complete cds Length = 3290 Score = 168 bits (85), Expect = 7e-39 Identities = 85/85 (100%) Strand = Plus / Plus Query: 247 ttcattcgtgcatccagggatggagtccctccaagggaaggagagcaacggcgctgttcc 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 ttcattcgtgcatccagggatggagtccctccaagggaaggagagcaacggcgctgttcc 118 Query: 307 tgtctgcaatggtggtggtggtgct 331 ||||||||||||||||||||||||| Sbjct: 119 tgtctgcaatggtggtggtggtgct 143 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 210 aggaaggaagggagaaggagacc 232 ||||||||||||||||||||||| Sbjct: 22 aggaaggaagggagaaggagacc 44
>ref|NM_189266.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 369 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 130 tcccctctccttcctcctcctcc 152
>ref|XM_470672.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 159 tcccctctccttcctcctcctcc 137
>gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1434D10 map near E1419S, complete sequence Length = 133421 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 31061 tcccctctccttcctcctcctcc 31083
>gb|AC147804.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0070G02 map near S13580, complete sequence Length = 73686 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 70232 tcccctctccttcctcctcctcc 70254
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 137292 tcccctctccttcctcctcctcc 137314
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 31431125 tcccctctccttcctcctcctcc 31431147 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 14421057 tcccctctccttcctcctcctcc 14421035 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 31431106 cccctctccttcctcctcctcc 31431127 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ccggtgcccggcgccgccctc 205 ||||||||||||||||||||| Sbjct: 28662556 ccggtgcccggcgccgccctc 28662536 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 23955621 ccctctccttcctcctcctcc 23955601 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 122 gctccgcctcccggtacccgcggcggac 149 |||||||| |||| |||||||||||||| Sbjct: 7455156 gctccgccgcccgctacccgcggcggac 7455129
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 1984135 tcccctctccttcctcctcctcc 1984157
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 64675 tcccctctccttcctcctcctcc 64653 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 64694 cccctctccttcctcctcctcc 64673
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 74864 tcccctctccttcctcctcctcc 74886
>tpg|BK000949.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M169, complete sequence Length = 1124 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 636 tcccctctccttcctcctcctcc 614
>tpg|BK000815.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M226, complete sequence Length = 1262 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 477 tcccctctccttcctcctcctcc 499
>tpg|BK000795.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M157, complete sequence Length = 1098 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 671 tcccctctccttcctcctcctcc 649
>tpg|BK000301.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M21, complete sequence Length = 1130 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 639 tcccctctccttcctcctcctcc 617
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 14137584 tcccctctccttcctcctcctcc 14137606 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 8881119 tcccctctccttcctcctcctcc 8881097 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 318190 cctctccttcctcctcctcc 318209
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 18557977 tcccctctccttcctcctcctcc 18557999 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcc 44 |||||||||||||||||||| Sbjct: 24158690 tcccctctccttcctcctcc 24158671
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 1984135 tcccctctccttcctcctcctcc 1984157 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 tcgccgcggcggcgatcaccg 122 ||||||||||||||||||||| Sbjct: 13939614 tcgccgcggcggcgatcaccg 13939634
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 26014582 tcccctctccttcctcctcctcc 26014560 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcca 48 ||||||||||||||||||||| Sbjct: 20274599 cctctccttcctcctcctcca 20274579 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ctccttcctcctcctccacc 50 |||||||||||||||||||| Sbjct: 5168783 ctccttcctcctcctccacc 5168764 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctc 46 |||||||||||||||||||| Sbjct: 1912233 ccctctccttcctcctcctc 1912214
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 23534229 tcccctctccttcctcctcctcc 23534207 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcc 44 |||||||||||||||||||| Sbjct: 15553167 tcccctctccttcctcctcc 15553186 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 tcctcctcctccaccgcgcc 55 |||||||||||||||||||| Sbjct: 11145691 tcctcctcctccaccgcgcc 11145672
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 31521641 tcccctctccttcctcctcctcc 31521663 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 14416032 tcccctctccttcctcctcctcc 14416010 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 31521622 cccctctccttcctcctcctcc 31521643 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ccggtgcccggcgccgccctc 205 ||||||||||||||||||||| Sbjct: 28753880 ccggtgcccggcgccgccctc 28753860 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 122 gctccgcctcccggtacccgcggcggac 149 |||||||| |||| |||||||||||||| Sbjct: 7452991 gctccgccgcccgctacccgcggcggac 7452964
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 6551476 tcccctctccttcctcctcctcc 6551454
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 33334405 tcccctctccttcctcctcctcc 33334383 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 16697121 tcccctctccttcctcctcctcc 16697143 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 40621794 cctctccttcctcctcctcc 40621775 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ttcccctctccttcctcctcctcc 47 |||||||||||| ||||||||||| Sbjct: 3495404 ttcccctctcctccctcctcctcc 3495381 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 172 acgcctccccgccccggtgcccggcgcc 199 ||||| ||||||||||| |||||||||| Sbjct: 1684527 acgccaccccgccccggcgcccggcgcc 1684500
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 120324 tcccctctccttcctcctcctcc 120346
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 91594 tcccctctccttcctcctcctcc 91572
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 48144 tcccctctccttcctcctcctcc 48122
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 127070 tcccctctccttcctcctcctcc 127092
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 127652 tcccctctccttcctcctcctcc 127630
>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415A04 Length = 160669 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 10571 tcccctctccttcctcctcctcc 10549
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 112089 tcccctctccttcctcctcctcc 112067
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 1984086 tcccctctccttcctcctcctcc 1984108 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 tcgccgcggcggcgatcaccg 122 ||||||||||||||||||||| Sbjct: 13946956 tcgccgcggcggcgatcaccg 13946976
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 18717378 tcccctctccttcctcctcctcc 18717400 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcc 44 |||||||||||||||||||| Sbjct: 24470359 tcccctctccttcctcctcc 24470340
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 14091864 tcccctctccttcctcctcctcc 14091886 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 8881002 tcccctctccttcctcctcctcc 8880980 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 318190 cctctccttcctcctcctcc 318209
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151176 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 69748 tcccctctccttcctcctcctcc 69726
>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150703 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 64125 tcccctctccttcctcctcctcc 64147
>gb|AC171199.1| Mus musculus BAC clone RP24-469I17 from chromosome 16, complete sequence Length = 146976 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 ttcccctctccttcctcctcctc 46 ||||||||||||||||||||||| Sbjct: 67536 ttcccctctccttcctcctcctc 67558
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 46.1 bits (23), Expect = 0.071 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcc 47 ||||||||||||||||||||||| Sbjct: 71401 tcccctctccttcctcctcctcc 71379
>ref|XM_473271.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctccaccgc 52 ||||||||||||||||||||| |||| Sbjct: 430 ccctctccttcctcctcctccgccgc 405
>ref|XM_588183.2| PREDICTED: Bos taurus similar to Akt-phosphorylation enhancer (LOC510943), mRNA Length = 4761 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 180 cccctctccttcctcctcctcc 159
>ref|XM_533038.2| PREDICTED: Canis familiaris similar to hemojuvelin isoform a, transcript variant 1 (LOC475830), mRNA Length = 1946 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 412 cccctctccttcctcctcctcc 391
>gb|AC122000.3| Mus musculus BAC clone RP24-328N20 from chromosome 16, complete sequence Length = 188993 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 42897 cccctctccttcctcctcctcc 42876
>gb|AC107234.8| Mus musculus chromosome 10, clone RP23-195B22, complete sequence Length = 218031 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggagac 231 |||||||||||||||||||||| Sbjct: 27865 aggaaggaagggagaaggagac 27844
>gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190140 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 30268 cccctctccttcctcctcctcc 30289
>emb|AL442063.8| Human DNA sequence from clone RP11-8N6 on chromosome 9 Contains the 3' end of the MELK gene for maternal embryonic leucine zipper kinase (KIAA0175), complete sequence Length = 141833 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 51468 cccctctccttcctcctcctcc 51489
>gb|AC159548.5| Mus musculus 6 BAC RP23-77B7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207770 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 1735 cccctctccttcctcctcctcc 1714
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctccaccgc 52 ||||||||||||||||||||| |||| Sbjct: 38177 ccctctccttcctcctcctccgccgc 38202
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctc 46 |||||||||||||||||||||| Sbjct: 63735 tcccctctccttcctcctcctc 63714
>emb|AL033534.1|SPBC215 S.pombe chromosome II cosmid c215 Length = 37777 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 ctgtctgcaatggtggtggtggtgct 331 |||| ||||||||||||||||||||| Sbjct: 21840 ctgtttgcaatggtggtggtggtgct 21815
>tpg|BK000769.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M146, complete sequence Length = 1072 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctc 46 |||||||||||||||||||||| Sbjct: 590 tcccctctccttcctcctcctc 569
>dbj|AB220969.1| Ipomoea nil FE gene for KANADI-like transcription factor FEATHERED, complete cds Length = 5221 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 1313 cccctctccttcctcctcctcc 1334
>dbj|AB220968.1| Ipomoea nil FE mRNA for KANADI-like transcription factor FEATHERED, complete cds Length = 1894 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 913 cccctctccttcctcctcctcc 934
>gb|AC084750.3| Homo sapiens BAC clone RP11-215J17 from 4, complete sequence Length = 154693 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 119341 cccctctccttcctcctcctcc 119362
>gb|AC161378.2| Mus musculus BAC clone RP23-202A6 from chromosome 16, complete sequence Length = 219298 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 2089 cccctctccttcctcctcctcc 2110
>ref|NM_001022609.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC215.09c), partial mRNA Length = 1188 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 ctgtctgcaatggtggtggtggtgct 331 |||| ||||||||||||||||||||| Sbjct: 1136 ctgtttgcaatggtggtggtggtgct 1161
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctc 46 |||||||||||||||||||||| Sbjct: 63928 tcccctctccttcctcctcctc 63907
>gb|AC153992.7| Mus musculus 6 BAC RP24-116E17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 195972 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 71201 cccctctccttcctcctcctcc 71180
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctc 46 |||||||||||||||||||||| Sbjct: 33632675 tcccctctccttcctcctcctc 33632654 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctccaccgc 52 ||||||||||||||||||||| |||| Sbjct: 26501290 ccctctccttcctcctcctccgccgc 26501315
>gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186215 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 143291 cccctctccttcctcctcctcc 143312
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 ccgccccggtgcccggcgccgc 201 |||||||||||||||||||||| Sbjct: 4318848 ccgccccggtgcccggcgccgc 4318869
>dbj|AK066705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075F19, full insert sequence Length = 1327 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctccaccgc 52 ||||||||||||||||||||| |||| Sbjct: 514 ccctctccttcctcctcctccgccgc 489
>dbj|AK062618.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B05, full insert sequence Length = 732 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctccaccgc 52 ||||||||||||||||||||| |||| Sbjct: 511 ccctctccttcctcctcctccgccgc 486
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctccaccgc 52 ||||||||||||||||||||| |||| Sbjct: 141930 ccctctccttcctcctcctccgccgc 141955
>emb|AL596104.24| Mouse DNA sequence from clone RP23-326P8 on chromosome 11, complete sequence Length = 164530 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctcc 47 |||||||||||||||||||||| Sbjct: 123398 cccctctccttcctcctcctcc 123419
>dbj|AP005262.3| Homo sapiens genomic DNA, chromosome 18 clone:CTD-2533G20, complete sequence Length = 113000 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ctctccttcctcctcctccacc 50 |||||||||||||||||||||| Sbjct: 94966 ctctccttcctcctcctccacc 94987
>gb|AC153609.2| Mus musculus 6 BAC RP23-77I23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221782 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctctccttcctcctcctccac 49 ||||||||||||||||||||| Sbjct: 198580 ctctccttcctcctcctccac 198600
>gb|AC153813.1| Homo sapiens chromosome 2 clone fa1028, complete sequence Length = 35562 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 4944 ccctctccttcctcctcctcc 4964
>ref|XM_482150.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 7 ccctctccttcctcctcctcc 27
>ref|XM_469552.1| Oryza sativa (japonica cultivar-group), mRNA Length = 231 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ccggtgcccggcgccgccctc 205 ||||||||||||||||||||| Sbjct: 92 ccggtgcccggcgccgccctc 72
>gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, complete sequence Length = 181156 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctccaccgc 52 |||| |||||||||||||||||||| Sbjct: 129161 cctcaccttcctcctcctccaccgc 129185
>ref|XM_478468.1| Oryza sativa (japonica cultivar-group), mRNA Length = 775 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcca 48 ||||||||||||||||||||| Sbjct: 254 cctctccttcctcctcctcca 234
>gb|AC123694.11| Mus musculus chromosome 10, clone RP23-326O5, complete sequence Length = 214111 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 21633 aggaaggaagggagaaggaga 21613
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 tcgccgcggcggcgatcaccg 122 ||||||||||||||||||||| Sbjct: 108240 tcgccgcggcggcgatcaccg 108260
>gb|AC161587.2| Mus musculus BAC clone RP24-492G17 from chromosome 9, complete sequence Length = 176237 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcctc 46 ||||||||||||||||||||| Sbjct: 64118 cccctctccttcctcctcctc 64098
>ref|XM_866774.1| PREDICTED: Bos taurus similar to chromosome 18 open reading frame 25 isoform a (LOC615069), partial mRNA Length = 693 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 gttcccctctccttcctcctcctcc 47 |||||||||| |||||||||||||| Sbjct: 529 gttcccctctacttcctcctcctcc 553
>gb|AC136699.23| Mus musculus chromosome 9, clone RP23-18E24, complete sequence Length = 229184 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcctc 46 ||||||||||||||||||||| Sbjct: 222223 cccctctccttcctcctcctc 222203
>gb|AC124604.4| Mus musculus BAC clone RP23-81K14 from chromosome 8, complete sequence Length = 220801 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 141919 ccctctccttcctcctcctcc 141939
>gb|AC131801.3| Mus musculus BAC clone RP24-538A12 from chromosome 10, complete sequence Length = 158745 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 tctccttcctcctcctccacc 50 ||||||||||||||||||||| Sbjct: 13463 tctccttcctcctcctccacc 13483
>gb|AC116998.3| Mus musculus BAC clone RP23-16F6 from 18, complete sequence Length = 216959 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 181444 aggaaggaagggagaaggaga 181424
>gb|AC160106.2| Mus musculus BAC clone RP24-300H23 from chromosome 13, complete sequence Length = 184364 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 172394 aggaaggaagggagaaggaga 172374
>gb|AY340264.1| Rhodnius prolixus GE-rich protein precursor, mRNA, complete cds Length = 444 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 215 ccctctccttcctcctcctcc 195
>emb|AL109804.41|HS1009E24 Human DNA sequence from clone RP5-1009E24 on chromosome 20 Contains the 5' end of the ADAM33 gene for a disintegrin and metalloproteinase domain 33 protein, the SN gene encoding sialoadhesin, the C20orf60 gene, the C20orf27 gene, the C20orf28 gene, the CENPB gene for centromere protein B, the CDC25B gene for cell division cycle protein 25B, the C20orf29 gene, the 5' end of the gene for a novel protein (KIAA1271) and nine CpG islands, complete sequence Length = 185820 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 ccccgccccggtgcccggcgccgcc 202 ||||||||||| ||||||||||||| Sbjct: 111081 ccccgccccggggcccggcgccgcc 111105
>emb|AL078605.30|HSJ894D12 Human DNA sequence from clone RP5-894D12 on chromosome 6q26-27 Contains the 5' end of the gene for KIAA1838, the DLL1 gene for delta-like 1 (mouse) homolog, the 3' end of a novel gene and 5 CpG islands, complete sequence Length = 119563 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 98586 ccctctccttcctcctcctcc 98566
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 cccgccccggtgcccggcgccgccc 203 |||||||| |||||||||||||||| Sbjct: 3009 cccgcccccgtgcccggcgccgccc 3033
>gb|AC160145.6| Mus musculus 10 BAC RP24-160D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 155235 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 128222 aggaaggaagggagaaggaga 128202
>gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8 Length = 265786 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gttcccctctccttcctcctc 43 ||||||||||||||||||||| Sbjct: 223721 gttcccctctccttcctcctc 223701
>gb|AC120498.2| Homo sapiens chromosome 16 clone RP11-616M22, complete sequence Length = 195680 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gttcccctctccttcctcctc 43 ||||||||||||||||||||| Sbjct: 166896 gttcccctctccttcctcctc 166876
>gb|AC129099.6| Canis familiaris clone rp81-289m11, complete sequence Length = 193729 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcca 48 ||||||||||||||||||||| Sbjct: 151953 cctctccttcctcctcctcca 151933
>gb|AC108046.3| Homo sapiens BAC clone RP11-308K2 from 4, complete sequence Length = 177483 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cccctctccttcctcctcctc 46 ||||||||||||||||||||| Sbjct: 55664 cccctctccttcctcctcctc 55684
>gb|AC097494.3| Homo sapiens BAC clone RP11-273B19 from 4, complete sequence Length = 144135 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 14098 aggaaggaagggagaaggaga 14118
>gb|AC097469.2| Homo sapiens BAC clone RP11-55N4 from 4, complete sequence Length = 191883 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 79506 aggaaggaagggagaaggaga 79526
>dbj|AK159456.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420020H08 product:unclassifiable, full insert sequence Length = 3919 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 490 aggaaggaagggagaaggaga 470
>gb|AC064807.7| Homo sapiens chromosome 8, clone RP11-546K22, complete sequence Length = 203270 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gttcccctctccttcctcctc 43 ||||||||||||||||||||| Sbjct: 91185 gttcccctctccttcctcctc 91165
>gb|AC067932.9| Homo sapiens chromosome 8, clone RP11-78F5, complete sequence Length = 163777 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 gttcccctctccttcctcctc 43 ||||||||||||||||||||| Sbjct: 111947 gttcccctctccttcctcctc 111967
>ref|NM_001810.5| Homo sapiens centromere protein B, 80kDa (CENPB), mRNA Length = 2856 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 ccccgccccggtgcccggcgccgcc 202 ||||||||||| ||||||||||||| Sbjct: 196 ccccgccccggggcccggcgccgcc 172
>gb|AC126687.3| Mus musculus BAC clone RP23-149L23 from chromosome 12, complete sequence Length = 186742 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 80587 ccctctccttcctcctcctcc 80607
>dbj|AK046852.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830029B09 product:RIKEN cDNA 5530600P05 gene, full insert sequence Length = 3918 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 772 aggaaggaagggagaaggaga 752
>dbj|AK084092.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130086I05 product:RIKEN cDNA 5530600P05 gene, full insert sequence Length = 3974 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 827 aggaaggaagggagaaggaga 807
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 18212808 ccctctccttcctcctcctcc 18212828
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 24 ttcccctctccttcctcctcctccaccgcgccg 56 ||||||||| |||||||||||||| || ||||| Sbjct: 24658631 ttcccctcttcttcctcctcctcctccccgccg 24658599
>gb|AC012653.8|AC012653 Homo sapiens chromosome 15 clone RP11-86K22 map 15q21.3, complete sequence Length = 190420 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 141953 aggaaggaagggagaaggaga 141933
>gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome 16, complete sequence Length = 176299 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 106620 aggaaggaagggagaaggaga 106640
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 ccggtgcccggcgccgccctc 205 ||||||||||||||||||||| Sbjct: 36340 ccggtgcccggcgccgccctc 36360
>gb|AC141929.2| Homo sapiens fosmid clone XXFOS-81251D1 from 2, complete sequence Length = 33952 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 29093 ccctctccttcctcctcctcc 29073
>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1372_D12 Length = 179898 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcca 48 ||||||||||||||||||||| Sbjct: 176987 cctctccttcctcctcctcca 176967
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 24 ttcccctctccttcctcctcctccaccgcgccg 56 ||||||||| |||||||||||||| || ||||| Sbjct: 141824 ttcccctcttcttcctcctcctcctccccgccg 141792
>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0052O11 Length = 106467 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcca 48 ||||||||||||||||||||| Sbjct: 17210 cctctccttcctcctcctcca 17190
>emb|AL808136.9| Mouse DNA sequence from clone RP23-75D13 on chromosome X, complete sequence Length = 183746 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctccac 49 ||||||||||||||||||| ||||| Sbjct: 11639 tcccctctccttcctcctcttccac 11615
>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0434E03 Length = 142414 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 35120 ccctctccttcctcctcctcc 35140
>dbj|AK111606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102P22, full insert sequence Length = 1378 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 7 ccctctccttcctcctcctcc 27
>gb|AC153505.6| Mus musculus 10 BAC RP23-336I13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190636 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 tctccttcctcctcctccacc 50 ||||||||||||||||||||| Sbjct: 18190 tctccttcctcctcctccacc 18170
>dbj|AK107021.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A01, full insert sequence Length = 1128 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 24 ttcccctctccttcctcctcctccaccgcgccg 56 ||||||||| |||||||||||||| || ||||| Sbjct: 339 ttcccctcttcttcctcctcctcctccccgccg 307
>gb|BC053847.1| Homo sapiens centromere protein B, 80kDa, mRNA (cDNA clone MGC:61764 IMAGE:6470289), complete cds Length = 2852 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 ccccgccccggtgcccggcgccgcc 202 ||||||||||| ||||||||||||| Sbjct: 196 ccccgccccggggcccggcgccgcc 172
>dbj|AK063026.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-B10, full insert sequence Length = 776 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcca 48 ||||||||||||||||||||| Sbjct: 254 cctctccttcctcctcctcca 234
>gb|U92882.1|MMU92882 Mus musculus slow skeletal muscle troponin T (Tnnt1) gene, complete cds Length = 11670 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctccaccgc 52 |||| |||||||||||||||||||| Sbjct: 2158 cctcaccttcctcctcctccaccgc 2134
>emb|AL824714.17| Mouse DNA sequence from clone RP23-116G14 on chromosome X, complete sequence Length = 156175 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 tctccttcctcctcctccacc 50 ||||||||||||||||||||| Sbjct: 19723 tctccttcctcctcctccacc 19703
>gb|DQ322171.1| Homo sapiens aldehyde dehydrogenase 1 family, member A2 (ALDH1A2) gene, complete cds Length = 116285 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 99256 aggaaggaagggagaaggaga 99276
>gb|AC149276.2| Mus musculus BAC clone RP24-316O8 from 6, complete sequence Length = 193191 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 65231 ccctctccttcctcctcctcc 65251
>gb|AC130723.4| Mus musculus BAC clone RP24-409P7 from 8, complete sequence Length = 197951 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 72586 ccctctccttcctcctcctcc 72606
>gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complete sequence Length = 238892 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 167498 aggaaggaagggagaaggaga 167518
>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete sequence Length = 226251 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 60449 aggaaggaagggagaaggaga 60429
>gb|AC162526.3| Mus musculus BAC clone RP23-50I19 from chromosome 13, complete sequence Length = 219418 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 aggaaggaagggagaaggaga 230 ||||||||||||||||||||| Sbjct: 199301 aggaaggaagggagaaggaga 199321
>gb|AC158992.2| Mus musculus BAC clone RP24-396L14 from chromosome 9, complete sequence Length = 163838 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 142806 ccctctccttcctcctcctcc 142786
>emb|AL831724.7| Mouse DNA sequence from clone RP23-405G17 on chromosome X, complete sequence Length = 100597 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 tctccttcctcctcctccacc 50 ||||||||||||||||||||| Sbjct: 86411 tctccttcctcctcctccacc 86391
>emb|AL590630.20| Mouse DNA sequence from clone RP23-353A15 on chromosome 8, complete sequence Length = 207705 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctcc 47 ||||||||||||||||||||| Sbjct: 145845 ccctctccttcctcctcctcc 145865
>emb|AL031711.30|HS333E1 Human DNA sequence from clone LA16-333E1 on chromosome 16, complete sequence Length = 39943 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gttcccctctccttcctcctc 43 ||||||||||||||||||||| Sbjct: 16899 gttcccctctccttcctcctc 16879
>emb|X55039.1|HSCENPB Human hCENP-B gene for centromere autoantigen B (CENP-B) Length = 3717 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 ccccgccccggtgcccggcgccgcc 202 ||||||||||| ||||||||||||| Sbjct: 924 ccccgccccggggcccggcgccgcc 900
>gb|AC154653.2| Mus musculus BAC clone RP24-262N5 from chromosome 16, complete sequence Length = 164851 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcctc 46 ||||||||||||||||||||| Sbjct: 78936 cccctctccttcctcctcctc 78916
>gb|AC105976.13| Mus musculus chromosome 5, clone RP24-315H14, complete sequence Length = 188130 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 105436 cctctccttcctcctcctcc 105417
>gb|AC115058.17| Mus musculus chromosome 5, clone RP24-381E3, complete sequence Length = 187046 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 16053 cctctccttcctcctcctcc 16034
>gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, complete sequence Length = 201694 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctc 46 |||||||||||||||||||| Sbjct: 43523 ccctctccttcctcctcctc 43504
>gb|BC040053.1| Homo sapiens methionine sulfoxide reductase B3, mRNA (cDNA clone MGC:50900 IMAGE:6025598), complete cds Length = 979 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cccgcggcggaccctcccgc 157 |||||||||||||||||||| Sbjct: 33 cccgcggcggaccctcccgc 52
>ref|NM_102719.3| Arabidopsis thaliana unknown protein AT1G29790 mRNA, complete cds Length = 1598 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tcctcctcctccaccgcgcc 55 |||||||||||||||||||| Sbjct: 308 tcctcctcctccaccgcgcc 327
>gb|AC160244.11| Mus musculus chromosome 5, clone RP24-212G3, complete sequence Length = 150276 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 133731 cctctccttcctcctcctcc 133712
>gb|AY553235.1| Leptosphaeria maculans HDX1 (HDX1), PKS1 (PKS1), and UVI-1h (UVI-1h) genes, complete cds; sirodesmin biosynthetic gene cluster, complete sequence; MP1 (MP1), and ZnF3 (ZnF3) genes, complete cds Length = 68683 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ttcccctctccttcctcctcctcc 47 ||||||||| |||||||||||||| Sbjct: 63146 ttcccctctacttcctcctcctcc 63123
>ref|XM_550011.1| Oryza sativa (japonica cultivar-group), mRNA Length = 384 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 acgcctccccgccccggtgcccggcgcc 199 ||||| ||||||||||| |||||||||| Sbjct: 284 acgccaccccgccccggcgcccggcgcc 311
>ref|XM_462798.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1280 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ttcccctctccttcctcctcctcc 47 |||||||||||| ||||||||||| Sbjct: 156 ttcccctctcctccctcctcctcc 179
>gb|AC124333.13| Mus musculus chromosome 1, clone RP24-511E9, complete sequence Length = 185857 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 170801 cctctccttcctcctcctcc 170820
>gb|AC164644.5| Mus musculus BAC clone RP23-276J7 from chromosome 5, complete sequence Length = 171252 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggag 229 |||||||||||||||||||| Sbjct: 14553 aggaaggaagggagaaggag 14534
>gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosome 17, complete sequence Length = 217187 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 40928 cctctccttcctcctcctcc 40909
>gb|AC153580.19| Mus musculus 6 BAC RP23-389F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180936 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 121600 cctctccttcctcctcctcc 121619
>ref|XM_450287.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 291 cctctccttcctcctcctcc 310
>gb|AC107811.28| Mus musculus chromosome 3, clone RP23-69D10, complete sequence Length = 166255 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 145152 cctctccttcctcctcctcc 145133
>ref|XM_476978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 876 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ctccttcctcctcctccacc 50 |||||||||||||||||||| Sbjct: 770 ctccttcctcctcctccacc 751
>ref|XM_476550.1| Oryza sativa (japonica cultivar-group), mRNA Length = 879 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctc 46 |||||||||||||||||||| Sbjct: 574 ccctctccttcctcctcctc 555
>ref|NM_033606.2| Mus musculus DEAQ RNA-dependent ATPase (Dqx1), mRNA Length = 3204 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ggaaggaagggagaaggaga 230 |||||||||||||||||||| Sbjct: 1379 ggaaggaagggagaaggaga 1360
>gb|AC147595.10| Mus musculus strain RIII clone mgsriii-p1_7 map 6, complete sequence Length = 90946 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ggaaggaagggagaaggaga 230 |||||||||||||||||||| Sbjct: 58882 ggaaggaagggagaaggaga 58863
>gb|AC005364.1| Homo sapiens chromosome 16, cosmid clone 53H2 (LANL), complete sequence Length = 36342 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctc 46 |||||||||||||||||||| Sbjct: 1177 ccctctccttcctcctcctc 1196
>gb|AC005347.1| Homo sapiens chromosome 16, cosmid clone 308C6 (LANL), complete sequence Length = 35828 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctc 46 |||||||||||||||||||| Sbjct: 21965 ccctctccttcctcctcctc 21984
>gb|AC113448.14| Mus musculus chromosome 15, clone RP23-1N23, complete sequence Length = 216103 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 207916 cctctccttcctcctcctcc 207935
>gb|AC107772.19| Mus musculus chromosome 15, clone RP23-102L5, complete sequence Length = 194704 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 59235 cctctccttcctcctcctcc 59254
>gb|AC116875.10| Mus musculus chromosome 8, clone RP24-426B21, complete sequence Length = 188938 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 20081 cctctccttcctcctcctcc 20062
>gb|BC058750.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), isoform 7, mRNA (cDNA clone MGC:68339 IMAGE:6390297), complete cds Length = 2206 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 1950 cctctccttcctcctcctcc 1969
>gb|AC099705.7| Mus musculus chromosome 1, clone RP23-256I3, complete sequence Length = 166683 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcca 48 |||||||| ||||||||||||||| Sbjct: 114881 tcccctcttcttcctcctcctcca 114858
>gb|AC150635.4| Bos taurus BAC CH240-448P19 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 151766 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 130028 cctctccttcctcctcctcc 130047
>gb|AC168883.3| Mus musculus 10 BAC RP23-406F5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 171839 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 aggaaggaagggagaaggag 229 |||||||||||||||||||| Sbjct: 16509 aggaaggaagggagaaggag 16528
>gb|AC138376.11| Mus musculus chromosome 7, clone RP23-53O7, complete sequence Length = 247484 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ttcccctctccttcctcctcctcc 47 ||||||||||| |||||||||||| Sbjct: 48456 ttcccctctccctcctcctcctcc 48479
>gb|AC108321.5| Rattus norvegicus BAC CH230-261E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 196424 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 196306 cctctccttcctcctcctcc 196325
>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0018H09, complete sequence Length = 155329 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 tcctcctcctccaccgcgcc 55 |||||||||||||||||||| Sbjct: 47945 tcctcctcctccaccgcgcc 47926
>ref|XM_421067.1| PREDICTED: Gallus gallus similar to KIAA1741 protein (LOC423136), mRNA Length = 2427 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 2020 cctctccttcctcctcctcc 2001
>ref|XM_460741.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F09603g) partial mRNA Length = 1206 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 tgtctgcaatggtggtggtggtgc 330 |||||| ||||||||||||||||| Sbjct: 1137 tgtctgtaatggtggtggtggtgc 1160
>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence Length = 203120 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 43599 cctctccttcctcctcctcc 43580
>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence Length = 153426 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 104097 cctctccttcctcctcctcc 104078
>gb|BC075680.1| Mus musculus DEAQ RNA-dependent ATPase, mRNA (cDNA clone MGC:100014 IMAGE:30612145), complete cds Length = 3204 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ggaaggaagggagaaggaga 230 |||||||||||||||||||| Sbjct: 1379 ggaaggaagggagaaggaga 1360
>ref|XM_870174.1| PREDICTED: Bos taurus similar to methionine sulfoxide reductase B3 isoform 1 (LOC617849), mRNA Length = 910 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cccgcggcggaccctcccgc 157 |||||||||||||||||||| Sbjct: 51 cccgcggcggaccctcccgc 70
>gb|AC149542.1| Populus trichocarpa clone Pop1-2C5, complete sequence Length = 146274 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 84054 cctctccttcctcctcctcc 84035
>gb|AE007225.1| Sinorhizobium meliloti 1021 plasmid pSymA section 31 of 121 of the complete plasmid sequence Length = 10824 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccgcggcggcgatcaccgct 124 |||||||||||||||||||| Sbjct: 4906 ccgcggcggcgatcaccgct 4925
>gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosome 18, complete sequence Length = 136832 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcct 45 |||||||||||||||||||| Sbjct: 70751 cccctctccttcctcctcct 70732
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cccctctccttcctcctcct 45 |||||||||||||||||||| Sbjct: 176223 cccctctccttcctcctcct 176204 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctc 46 |||||||||||||||||||| Sbjct: 17277 ccctctccttcctcctcctc 17258
>gb|AC125186.6| Mus musculus BAC clone RP23-302C16 from chromosome 1, complete sequence Length = 192042 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 72909 cctctccttcctcctcctcc 72928
>gb|DQ020476.1| Sus scrofa sterol regulatory element binding protein 2 (SREBP-2) mRNA, partial cds Length = 3106 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 ctgctgccacgttcccctctccttcctc 40 |||| ||||| ||||||||||||||||| Sbjct: 2513 ctgccgccaccttcccctctccttcctc 2540
>ref|NM_001031679.1| Homo sapiens methionine sulfoxide reductase B3 (MSRB3), transcript variant 2, mRNA Length = 4369 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cccgcggcggaccctcccgc 157 |||||||||||||||||||| Sbjct: 67 cccgcggcggaccctcccgc 86
>ref|NM_198080.2| Homo sapiens methionine sulfoxide reductase B3 (MSRB3), transcript variant 1, mRNA Length = 4242 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cccgcggcggaccctcccgc 157 |||||||||||||||||||| Sbjct: 67 cccgcggcggaccctcccgc 86
>gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, complete sequence Length = 194261 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 97564 cctctccttcctcctcctcc 97545
>gb|AC122753.11| Mus musculus chromosome 5, clone RP24-492O4, complete sequence Length = 183819 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcc 44 |||||||||||||||||||| Sbjct: 29975 tcccctctccttcctcctcc 29994 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcc 44 |||||||||||||||||||| Sbjct: 29958 tcccctctccttcctcctcc 29977
>gb|AC163033.4| Mus musculus BAC clone RP23-432F6 from chromosome 12, complete sequence Length = 201510 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 172710 cctctccttcctcctcctcc 172729 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 172680 cctctccttcctcctcctcc 172699 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 172644 cctctccttcctcctcctcc 172663 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 172569 cctctccttcctcctcctcc 172588 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 172539 cctctccttcctcctcctcc 172558
>gb|AC162389.6| Mus musculus 6 BAC RP24-114M8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189477 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 46954 cctctccttcctcctcctcc 46935
>gb|AC134790.6| Mus musculus chromosome 15, clone RP24-541O5, complete sequence Length = 185593 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 164462 cctctccttcctcctcctcc 164443
>gb|AC125079.3| Mus musculus chromosome 16 clone RP23-480M17, complete sequence Length = 174536 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 108432 cctctccttcctcctcctcc 108413
>gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, complete sequence Length = 255921 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ttcccctctccttcctcctc 43 |||||||||||||||||||| Sbjct: 169166 ttcccctctccttcctcctc 169147
>gb|AC115843.10| Mus musculus chromosome 9, clone RP24-239P6, complete sequence Length = 215265 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 aggaaggaagggagaaggag 229 |||||||||||||||||||| Sbjct: 119769 aggaaggaagggagaaggag 119788
>gb|AC138457.3| Mus musculus BAC clone RP23-358E1 from chromosome 19, complete sequence Length = 237854 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 109870 cctctccttcctcctcctcc 109851
>gb|AC125325.4| Mus musculus BAC clone RP23-296K22 from chromosome 9, complete sequence Length = 156124 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ttcccctctccttcctcctcctcc 47 |||||||| ||||||||||||||| Sbjct: 22335 ttcccctccccttcctcctcctcc 22312
>gb|AC126253.3| Mus musculus BAC clone RP24-119M15 from chromosome 14, complete sequence Length = 172035 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 95470 cctctccttcctcctcctcc 95451
>gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosome 17, complete sequence Length = 187926 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 35031 cctctccttcctcctcctcc 35050
>gb|AC140207.3| Mus musculus BAC clone RP24-446P10 from chromosome 18, complete sequence Length = 185316 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 87364 cctctccttcctcctcctcc 87383
>gb|AC127304.4| Mus musculus BAC clone RP23-285C13 from chromosome 3, complete sequence Length = 151365 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 47858 cctctccttcctcctcctcc 47877
>ref|XM_803441.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505163.30) partial mRNA Length = 2982 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 gttcccctctccttcctcctcctc 46 |||||||||| ||||||||||||| Sbjct: 1293 gttcccctcttcttcctcctcctc 1270
>gb|AC124760.4| Mus musculus BAC clone RP23-133I8 from chromosome 1, complete sequence Length = 230067 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 87880 cctctccttcctcctcctcc 87899
>gb|AC116586.6| Mus musculus BAC clone RP23-402K15 from chromosome 7, complete sequence Length = 191174 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ttcccctctccttcctcctcctcc 47 ||||||||||| |||||||||||| Sbjct: 23059 ttcccctctccctcctcctcctcc 23036
>gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosome 19, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 30229 cctctccttcctcctcctcc 30210
>gb|AC133100.5| Mus musculus BAC clone RP23-98O11 from chromosome 19, complete sequence Length = 204855 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 152770 cctctccttcctcctcctcc 152789
>gb|AC009108.10| Homo sapiens chromosome 16 clone RP11-463O9, complete sequence Length = 168656 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 40483 cctctccttcctcctcctcc 40464
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 122 gctccgcctcccggtacccgcggcggac 149 |||||||| |||| |||||||||||||| Sbjct: 93711 gctccgccgcccgctacccgcggcggac 93684
>gb|AC116404.12| Mus musculus chromosome 5, clone RP23-143M9, complete sequence Length = 211381 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 97666 cctctccttcctcctcctcc 97647
>gb|AC133078.3| Mus musculus BAC clone RP24-444O21 from chromosome 10, complete sequence Length = 141420 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 115952 cctctccttcctcctcctcc 115933
>gb|AC122047.4| Mus musculus BAC clone RP24-456A9 from chromosome 2, complete sequence Length = 172110 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 71437 cctctccttcctcctcctcc 71456
>gb|AC122043.4| Mus musculus BAC clone RP24-448C16 from chromosome 5, complete sequence Length = 187106 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctc 46 |||||||||||||||||||| Sbjct: 92469 ccctctccttcctcctcctc 92450
>gb|AC123028.4| Mus musculus BAC clone RP24-553H21 from chromosome 10, complete sequence Length = 175143 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 117614 cctctccttcctcctcctcc 117633
>gb|AC128698.4| Mus musculus BAC clone RP24-127J4 from chromosome 9, complete sequence Length = 148461 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 9054 cctctccttcctcctcctcc 9035
>gb|AC122811.4| Mus musculus BAC clone RP23-281J12 from 12, complete sequence Length = 169618 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 99042 cctctccttcctcctcctcc 99061
>gb|AC123839.2| Mus musculus BAC clone RP23-392K4 from 17, complete sequence Length = 204402 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ttcccctctccttcctcctcctcc 47 |||||||| ||||||||||||||| Sbjct: 148649 ttcccctccccttcctcctcctcc 148626
>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence Length = 194372 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 179280 cctctccttcctcctcctcc 179299
>gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complete sequence Length = 165179 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 112074 cctctccttcctcctcctcc 112055
>gb|AC122025.3| Mus musculus BAC clone RP24-388G8 from 12, complete sequence Length = 202612 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 154223 cctctccttcctcctcctcc 154242
>gb|BC055478.1| Mus musculus RIKEN cDNA C430004E15 gene, mRNA (cDNA clone IMAGE:4234957), partial cds Length = 1289 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 510 cctctccttcctcctcctcc 491
>gb|AC112680.12| Mus musculus chromosome 9, clone RP23-203D1, complete sequence Length = 226883 Score = 40.1 bits (20), Expect = 4.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 8 taccactgctgccacgttcccctctccttcctcctcctcc 47 ||||||||||||||| | ||||| |||||||||||||| Sbjct: 128973 taccactgctgccaccatttcctcttcttcctcctcctcc 128934
>gb|BC024573.1| Mus musculus RIKEN cDNA C430004E15 gene, mRNA (cDNA clone IMAGE:5040365), partial cds Length = 1134 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 370 cctctccttcctcctcctcc 351
>gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0039F06, complete sequence Length = 133022 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tcccctctccttcctcctcc 44 |||||||||||||||||||| Sbjct: 46736 tcccctctccttcctcctcc 46755
>ref|XM_536435.2| PREDICTED: Canis familiaris similar to KIBRA protein (LOC479297), mRNA Length = 3420 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 2683 cctctccttcctcctcctcc 2664
>gb|AC101723.9| Mus musculus chromosome 17, clone RP23-316J7, complete sequence Length = 181452 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 103858 cctctccttcctcctcctcc 103877
>gb|AY358229.1| Homo sapiens clone DNA96898 SPRR1965 (UNQ1965) mRNA, complete cds Length = 1766 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cccgcggcggaccctcccgc 157 |||||||||||||||||||| Sbjct: 67 cccgcggcggaccctcccgc 86
>gb|AC100153.10| Mus musculus chromosome 7, clone RP23-43N3, complete sequence Length = 132518 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ttcccctctccttcctcctcctcc 47 ||||||||||| |||||||||||| Sbjct: 81595 ttcccctctccatcctcctcctcc 81618
>gb|AC164702.2| Mus musculus BAC clone RP23-402H19 from chromosome 10, complete sequence Length = 208221 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 169658 cctctccttcctcctcctcc 169639
>gb|AC160976.2| Mus musculus BAC clone RP24-67M24 from chromosome 9, complete sequence Length = 184288 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 138471 cctctccttcctcctcctcc 138490
>gb|AC164516.2| Dasypus novemcinctus clone VMRC5-470I13, complete sequence Length = 127034 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tctccttcctcctcctccac 49 |||||||||||||||||||| Sbjct: 66059 tctccttcctcctcctccac 66040
>gb|AY846391.1| Oryza sativa (indica cultivar-group) NPR1 interactor mRNA, complete cds Length = 771 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 acgcctccccgccccggtgcccggcgcc 199 ||||| ||||||||||| |||||||||| Sbjct: 366 acgccaccccgccccggcgcccggcgcc 393
>gb|AC147000.32| Medicago truncatula clone mth2-124a16, complete sequence Length = 113682 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cctcctcctccaccgcgccg 56 |||||||||||||||||||| Sbjct: 74691 cctcctcctccaccgcgccg 74710
>gb|AC161761.3| Mus musculus BAC clone RP23-379E17 from chromosome 3, complete sequence Length = 205852 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ttcccctctccttcctcctcctcc 47 ||||||||||| |||||||||||| Sbjct: 115825 ttcccctctccctcctcctcctcc 115802
>gb|AC116794.11| Mus musculus chromosome 5, clone RP24-312A3, complete sequence Length = 154612 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 49827 cctctccttcctcctcctcc 49846
>emb|AL805961.22| Human DNA sequence from clone RP11-718D19 on chromosome 1, complete sequence Length = 166258 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 90570 cctctccttcctcctcctcc 90551
>emb|Z98044.13|HS510D11 Human DNA sequence from clone RP3-510D11 on chromosome 1p36.2-36.3 Contains two novel genes, the H6PD gene for hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) (FLJ22807) and two CpG islands, complete sequence Length = 129149 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 79850 cctctccttcctcctcctcc 79831
>gb|BC047927.1| Mus musculus RIKEN cDNA C430004E15 gene, mRNA (cDNA clone IMAGE:4985483) Length = 927 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 87 cctctccttcctcctcctcc 68
>emb|AL590729.14| Human DNA sequence from clone RP11-467D18 on chromosome 1 Contains the 5' end of the SFRS4 gene for splicing factor arginine/serine-rich 4 protein, the gene for nuclear receptor binding factor 1 (CGI-63) (FLJ22177), a novel gene, the 5' end of the PTPRU gene for protein tyrosine phosphatase receptor type U and a CpG island, complete sequence Length = 71174 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 caataggaaggaagggagaaggag 229 |||||||||||||| ||||||||| Sbjct: 29016 caataggaaggaagagagaaggag 28993
>gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence Length = 199946 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 147493 cctctccttcctcctcctcc 147512
>emb|AL355531.16| Human DNA sequence from clone RP11-300B2 on chromosome 10 Contains the 5' end of the MGMT gene for O-6-methylguanine-DNA methyltransferase, complete sequence Length = 213887 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 144351 cctctccttcctcctcctcc 144370
>emb|AL135913.8| Human DNA sequence from clone RP1-44I20 on chromosome 6, complete sequence Length = 44006 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ccctctccttcctcctcctc 46 |||||||||||||||||||| Sbjct: 958 ccctctccttcctcctcctc 977
>gb|AC161195.4| Mus musculus chromosome 15, clone RP23-313M10, complete sequence Length = 166637 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ttcccctctccttcctcctcctcc 47 |||||||| ||||||||||||||| Sbjct: 51792 ttcccctccccttcctcctcctcc 51815
>gb|AC159539.6| Mus musculus chromosome 5, clone RP23-228F6, complete sequence Length = 238599 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 45877 cctctccttcctcctcctcc 45858
>gb|AC175816.4| Mus musculus chromosome 5, clone wi1-2209C9, complete sequence Length = 38620 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 aggaaggaagggagaaggag 229 |||||||||||||||||||| Sbjct: 23077 aggaaggaagggagaaggag 23058
>emb|X76932.1|SORPL1 S.oleracea mRNA for ribosomal protein L1 Length = 1426 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctctccttcctcctcctcca 48 |||||||||||||||||||| Sbjct: 324 ctctccttcctcctcctcca 305
>gb|AC163438.3| Mus musculus chromosome 8, clone RP23-278M23, complete sequence Length = 186102 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 75847 cctctccttcctcctcctcc 75866
>gb|AC162287.4| Mus musculus chromosome 7, clone RP24-243J4, complete sequence Length = 152934 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 96893 cctctccttcctcctcctcc 96874
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 tgtctgcaatggtggtggtggtgc 330 |||||| ||||||||||||||||| Sbjct: 765161 tgtctgtaatggtggtggtggtgc 765138
>emb|BX648776.1|HSM808927 Homo sapiens mRNA; cDNA DKFZp686I14130 (from clone DKFZp686I14130) Length = 4354 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cccgcggcggaccctcccgc 157 |||||||||||||||||||| Sbjct: 51 cccgcggcggaccctcccgc 70
>emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on chromosome 11 Contains the 5' end of the Hs3st3a gene for heparan sulfate (glucosamine) 3-O-sulfotransferase 3A and a CpG island, complete sequence Length = 144847 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ctccttcctcctcctccacc 50 |||||||||||||||||||| Sbjct: 128543 ctccttcctcctcctccacc 128524
>emb|AL606521.24| Mouse DNA sequence from clone RP23-280J3 on chromosome 11 Contains the 5' end of the Mtmr3 gene for myotubularin related protein 3, two novel genes, the gene for a novel protein similar to human ASC-1 complex subunit P100, the gene for a novel protein similar to human ubiquinol-cytochrome C reductase complex 7.2 kDa protein UQCR10, the Cabp7 gene for calcium binding protein 7, the 3' end of the Nf2 gene for neurofibromatosis 2 and two CpG islands, complete sequence Length = 233997 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 29230 cctctccttcctcctcctcc 29249
>emb|AL356324.1|NCB9J10 Neurospora crassa DNA linkage group II BAC clone B9J10 Length = 66924 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 13432 cctctccttcctcctcctcc 13413
>gb|AC083984.7| Homo sapiens chromosome 11, clone RP11-401C19, complete sequence Length = 117149 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 23840 cctctccttcctcctcctcc 23821
>gb|AC141020.2| Rattus norvegicus BAC CH230-497A18 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 168022 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 136394 cctctccttcctcctcctcc 136413
>gb|AC164087.5| Mus musculus BAC clone RP23-408K7 from chromosome 9, complete sequence Length = 211783 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 181222 cctctccttcctcctcctcc 181203
>gb|BT008461.1| Arabidopsis thaliana At1g29790 gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tcctcctcctccaccgcgcc 55 |||||||||||||||||||| Sbjct: 259 tcctcctcctccaccgcgcc 278
>emb|AL603708.13| Mouse DNA sequence from clone RP23-381C21 on chromosome 11, complete sequence Length = 198743 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 191907 cctctccttcctcctcctcc 191926
>emb|AL928965.35| Mouse DNA sequence from clone RP23-60M5 on chromosome 2, complete sequence Length = 92250 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 27544 cctctccttcctcctcctcc 27563
>gb|AY850788.1| Halichoeres melasmapomus isolate M1129 cytochrome oxidase c subunit 1 (CO1) gene, partial cds; mitochondrial Length = 650 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ttcccctctccttcctcctcctcc 47 |||||| ||||||||||||||||| Sbjct: 252 ttcccccctccttcctcctcctcc 275
>gb|AC156980.9| Mus musculus chromosome 1, clone RP23-191A12, complete sequence Length = 224673 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 tcccctctccttcctcctcctcca 48 |||||||| ||||||||||||||| Sbjct: 94134 tcccctcttcttcctcctcctcca 94111
>gb|AC109583.2| Homo sapiens chromosome 3 clone RP11-427P5, complete sequence Length = 177251 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ccctctccttcctcctcctc 46 |||||||||||||||||||| Sbjct: 169724 ccctctccttcctcctcctc 169705
>gb|AC157551.6| Mus musculus chromosome 5, clone RP24-270K7, complete sequence Length = 171680 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 124715 cctctccttcctcctcctcc 124734
>gb|AC105195.5| Homo sapiens chromosome 8, clone RP11-480J6, complete sequence Length = 167834 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cctctccttcctcctcctcc 47 |||||||||||||||||||| Sbjct: 124000 cctctccttcctcctcctcc 124019
>ref|NM_204678.1| Gallus gallus splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila) (SFRS10), mRNA Length = 1334 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 ctctccttcctcctcctccaccgc 52 |||||| ||||||||||||||||| Sbjct: 847 ctctccatcctcctcctccaccgc 824
>emb|CR352231.8| Zebrafish DNA sequence from clone CH211-216G8 in linkage group 16, complete sequence Length = 202686 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctctccttcctcctcctcca 48 |||||||||||||||||||| Sbjct: 3941 ctctccttcctcctcctcca 3960
>emb|BX537338.9| Zebrafish DNA sequence from clone DKEY-258E8 in linkage group 16, complete sequence Length = 309004 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctctccttcctcctcctcca 48 |||||||||||||||||||| Sbjct: 9557 ctctccttcctcctcctcca 9576 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,056,331 Number of Sequences: 3902068 Number of extensions: 5056331 Number of successful extensions: 361113 Number of sequences better than 10.0: 381 Number of HSP's better than 10.0 without gapping: 405 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 353494 Number of HSP's gapped (non-prelim): 7617 length of query: 331 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 309 effective length of database: 17,147,199,772 effective search space: 5298484729548 effective search space used: 5298484729548 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)