>IF2_XANC5 (Q3BRP5) Translation initiation factor IF-2|
          Length = 904

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
 Frame = +3

Query: 84  RKTARQGLAGALAP--------PRSAAVLAA*RSTRAHNPRAHRSAAAGAMSQPLVVKKD 239
           RK A +  A A AP        P +AA  A   S+ +  PRA R A A   S+P    + 
Sbjct: 173 RKAAEEAAAAASAPAPVADAPTPSAAAPAARSPSSPSSAPRAARPAGASPASRPAAPARA 232

Query: 240 DD 245
           DD
Sbjct: 233 DD 234

>IF2_XANAC (Q8PJ55) Translation initiation factor IF-2|
          Length = 904

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
 Frame = +3

Query: 84  RKTARQGLAGALAP--------PRSAAVLAA*RSTRAHNPRAHRSAAAGAMSQPLVVKKD 239
           RK A +  A A AP        P +AA  A   S+ +  PRA R A A   S+P    + 
Sbjct: 173 RKAAEEAAAAASAPAPVADAPKPSAAAPAARLPSSPSSAPRAARPAGASPASRPAAPARA 232

Query: 240 DD 245
           DD
Sbjct: 233 DD 234

>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell|
           protein 0)
          Length = 532

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 76  SSLAKPRDKDSRELSRRPAPPPFSRHSGR 162
           SS   PR +DSR    RP PP   R  GR
Sbjct: 247 SSAQAPRQEDSRPARARPGPPTRGRRRGR 275

>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0|
          Length = 532

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 76  SSLAKPRDKDSRELSRRPAPPPFSRHSGR 162
           SS   PR +DSR    RP PP   R  GR
Sbjct: 247 SSAQAPRQEDSRPARARPGPPTRGRRRGR 275

>ST32C_HUMAN (Q86UX6) Serine/threonine-protein kinase 32C (EC 2.7.11.1) (PKE)|
           (YANK3)
          Length = 486

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 100 KDSRELSRRPAPPPFSRHSGRPGRTIRARIAPPQQGP 210
           K S++L R P P P SR +  P      R A P  GP
Sbjct: 442 KRSQDLPREPLPAPESRDAAEPVEDEAERSALPMCGP 478

>VE4_HPV08 (P06425) Probable protein E4|
          Length = 229

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +1

Query: 67  PVQSSLAKPRDKDSRELSRRPAPPPFSRHSGRPGRTIRARIAP---PQQGP 210
           P+Q+S  KP+ KD      RPA     +  G  GR     +AP   P  GP
Sbjct: 46  PLQNSHNKPKPKDEGTGDGRPAEQDRKKSRGDQGRDTAPGLAPGRSPGLGP 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,174,782
Number of Sequences: 219361
Number of extensions: 431100
Number of successful extensions: 2087
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2072
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)