>FA61A_MOUSE (Q8K2F8) Protein FAM61A|
          Length = 462

 Score =  108 bits (270), Expect = 6e-24
 Identities = 57/92 (61%), Positives = 69/92 (75%)
 Frame = +1

Query: 88  YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 267
           YIGS ISL SK+EIRYEG+LYTI+TE S++ L  VRSFG+E R  D + IP  D+++EYI
Sbjct: 7   YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTD-RPIPPRDEVFEYI 65

Query: 268 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 363
           +FRGSDIKDL V   PP    SL  DPAI+QS
Sbjct: 66  IFRGSDIKDLTV-CEPPKPQCSLPQDPAIVQS 96

>FA61A_PONPY (Q5R4R4) Protein FAM61A|
          Length = 463

 Score =  108 bits (270), Expect = 6e-24
 Identities = 57/92 (61%), Positives = 69/92 (75%)
 Frame = +1

Query: 88  YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 267
           YIGS ISL SK+EIRYEG+LYTI+TE S++ L  VRSFG+E R  D + IP  D+++EYI
Sbjct: 7   YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTD-RPIPPRDEVFEYI 65

Query: 268 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 363
           +FRGSDIKDL V   PP    SL  DPAI+QS
Sbjct: 66  IFRGSDIKDLTV-CEPPKPQCSLPQDPAIVQS 96

>FA61A_HUMAN (Q8ND56) Protein FAM61A (Putative alpha synuclein-binding protein)|
           (AlphaSNBP)
          Length = 463

 Score =  108 bits (270), Expect = 6e-24
 Identities = 57/92 (61%), Positives = 69/92 (75%)
 Frame = +1

Query: 88  YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 267
           YIGS ISL SK+EIRYEG+LYTI+TE S++ L  VRSFG+E R  D + IP  D+++EYI
Sbjct: 7   YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTD-RPIPPRDEVFEYI 65

Query: 268 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 363
           +FRGSDIKDL V   PP    SL  DPAI+QS
Sbjct: 66  IFRGSDIKDLTV-CEPPKPQCSLPQDPAIVQS 96

>FA61B_XENTR (Q566L7) Protein FAM61B homolog|
          Length = 382

 Score =  102 bits (255), Expect = 3e-22
 Identities = 53/92 (57%), Positives = 68/92 (73%)
 Frame = +1

Query: 88  YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 267
           YIGS ISL SK++IRYEG+LYTI+TE S++ L  VRSFG+E R  D +  P  +++YEYI
Sbjct: 7   YIGSKISLISKAQIRYEGILYTIDTENSTVALAKVRSFGTEDRPTD-RPAPPREEVYEYI 65

Query: 268 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 363
           +FRGSDIKD+ V   PP    +L  DPAI+QS
Sbjct: 66  IFRGSDIKDITV-CEPPKASHALPQDPAIVQS 96

>FA61B_MOUSE (Q8CGC4) Protein FAM61B|
          Length = 385

 Score =  101 bits (252), Expect = 7e-22
 Identities = 53/92 (57%), Positives = 69/92 (75%)
 Frame = +1

Query: 88  YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 267
           Y+GS ISL SK++IRYEG+LYTI+T+ S++ L  VRSFG+E R  D +  P  ++IYEYI
Sbjct: 9   YLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTD-RPAPPREEIYEYI 67

Query: 268 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 363
           +FRGSDIKD+ V   P AQ  +L  DPAI+QS
Sbjct: 68  IFRGSDIKDITVCEPPKAQ-HTLPQDPAIVQS 98

>FA61B_HUMAN (Q9BX40) Protein FAM61B|
          Length = 385

 Score =  101 bits (252), Expect = 7e-22
 Identities = 53/92 (57%), Positives = 69/92 (75%)
 Frame = +1

Query: 88  YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYEYI 267
           Y+GS ISL SK++IRYEG+LYTI+T+ S++ L  VRSFG+E R  D +  P  ++IYEYI
Sbjct: 9   YLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTD-RPAPPREEIYEYI 67

Query: 268 LFRGSDIKDLQVKSSPPAQPASLHNDPAIIQS 363
           +FRGSDIKD+ V   P AQ  +L  DPAI+QS
Sbjct: 68  IFRGSDIKDITVCEPPKAQ-HTLPQDPAIVQS 98

>SUM2_SCHPO (Q9HGL3) Protein sum2|
          Length = 426

 Score =  101 bits (251), Expect = 9e-22
 Identities = 51/97 (52%), Positives = 75/97 (77%), Gaps = 4/97 (4%)
 Frame = +1

Query: 88  YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKD-GQQIPASDKIYEY 264
           +IGS ISL SKS+IRY G+L  IN+++S++ L++VR  G+EGRK+D  Q+IP SD +++Y
Sbjct: 4   FIGSRISLISKSDIRYVGILQDINSQDSTLALKHVRWCGTEGRKQDPSQEIPPSDNVFDY 63

Query: 265 ILFRGSDIKDLQVK---SSPPAQPASLHNDPAIIQSH 366
           I+FRGSD+KDL+++   ++P A P    NDPAII S+
Sbjct: 64  IVFRGSDVKDLRIEEPATTPSAPPVQPPNDPAIIGSN 100

>SCD6_YEAST (P45978) Protein SCD6|
          Length = 349

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = +1

Query: 88  YIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDG-QQIPASDKIYEY 264
           YIG  ISL S ++ RY G+L  I++E+ ++ L+ VR FG+EGRK  G ++I  +  +Y  
Sbjct: 4   YIGKTISLISVTDNRYVGLLEDIDSEKGTVTLKEVRCFGTEGRKNWGPEEIYPNPTVYNS 63

Query: 265 ILFRGSDIKDLQV 303
           + F GS++KDL +
Sbjct: 64  VKFNGSEVKDLSI 76

>EATA_ECOLI (Q84GK0) Serine protease eatA precursor (EC 3.4.21.-) (Secreted|
           autotransporter protein eatA) (ETEC autotransporter A)
          Length = 1364

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +1

Query: 94  GSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIY 258
           G+++S  +K++      L T+N  + S+ ++    FG  G   D   +PAS+  +
Sbjct: 519 GAIVSNNNKNKSELTLKLQTLNENDISVDVKTYEVFGGHGSPGDLYYVPASNTYF 573

>PBP1_YEAST (P53297) PAB1-binding protein 1|
          Length = 722

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +1

Query: 91  IGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDK-IYEYI 267
           IGS +++T  S ++Y G+L + N  ES+ G+  V  F           +    K + E +
Sbjct: 60  IGSDVTVTVTSGVKYTGLLVSCNL-ESTNGIDVVLRFPRVADSGVSDSVDDLAKTLGETL 118

Query: 268 LFRGSDIKDLQVKS 309
           L  G D+ +L++K+
Sbjct: 119 LIHGEDVAELELKN 132

>SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22|
          Length = 209

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = -2

Query: 284 SLPRKSIYSYILSLAGICWPSFLRPSL-PNERTFLSPMLDSSV---LMVYRTP 138
           S PRK  +SY+  LAG  W SF   +L P  R +     D+ +     VY TP
Sbjct: 70  SYPRKLAFSYLEELAGEFWNSFGEEALQPGLRPYAFVQFDTFMQKSKRVYNTP 122

>FTSK_CHLMU (Q9PLI7) DNA translocase ftsK|
          Length = 794

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
 Frame = +1

Query: 97  SVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKD-----GQQIPAS----- 246
           ++I L  + E+RYE + +        +GLRN++SF S  R  D      ++IP       
Sbjct: 533 ALIWLVREMELRYEILRF--------LGLRNIQSFNSRTRNVDIEASYDKEIPEKMPFIV 584

Query: 247 ---DKIYEYILFRGSDIKDLQVKSSPPAQPASLH 339
              D++ + +L    DI+   V+ +  A+   +H
Sbjct: 585 GIIDELSDLLLSSSHDIETPIVRLAQMARAVGIH 618

>SYFA_CARHZ (Q3ABT4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 340

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = +1

Query: 82  ETYIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGSEGRKKDGQQIPASDKIYE 261
           + Y+G VI ++  +E++   V +     E ++ L+N+++   E R + G +I    K+ E
Sbjct: 10  QKYLGEVIRVSDLNELQTVKVKFLGKKGEVTLALKNLKNLPPELRPEAGHKINTVKKLIE 69


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.135    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,999,729
Number of Sequences: 219361
Number of extensions: 935454
Number of successful extensions: 2687
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2670
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)