ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 55 5e-08
2LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase... 54 9e-08
3LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) 54 1e-07
4LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12) 38 0.008
5LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12) 37 0.014
6LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12) 37 0.014
7LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2) 37 0.019
8LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12) 35 0.054
9LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12) 35 0.071
10LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12) 33 0.21
11LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12) 33 0.27
12LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12) 31 0.79
13LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12) 31 1.0
14UL14_EHV1V (P84404) Hypothetical gene 48 protein 31 1.0
15UL14_EHV1B (P28949) Hypothetical gene 48 protein 31 1.0
16LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3) 30 1.3
17IWS1_XENTR (Q505H7) IWS1-like protein 30 2.3
18LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena... 29 3.0
19LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94) 29 3.9
20PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine ... 29 3.9
21IWS1A_XENLA (Q6DE96) IWS1-like protein A 29 3.9
22GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chl... 28 5.1
23LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1) 28 8.7

>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVM 190
           +GG++  LTG  + A LKG+VVLMRKN LD NDFGAT++
Sbjct: 3   LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATII 41



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>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 54.3 bits (129), Expect = 9e-08
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVM 190
           +GGI+  LTG  + A LKGS+VLMRKNALD NDFGATV+
Sbjct: 2   LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVI 39



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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVM 190
           +GGI+  +TG  + + LKG+VVLMRKN LD NDFGATV+
Sbjct: 2   LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVI 40



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>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
 Frame = +2

Query: 83  IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATV 187
           ++  L GGL G H     +KG+VV+M+KNALDF D   ++
Sbjct: 1   MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSL 40



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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVM 190
           +GGIV  + G      +KG V+LM+KN LDF + GA+V+
Sbjct: 3   LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVV 41



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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
 Frame = +2

Query: 95  LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVM 190
           LTGG        +KG+VVLM+KN LDFNDF A+ +
Sbjct: 9   LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFL 43



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>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 36.6 bits (83), Expect = 0.019
 Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 65  MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFN 169
           MF V G+   L  G  G H +KG+VVLMRKN LDFN
Sbjct: 1   MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFN 34



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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 35.0 bits (79), Expect = 0.054
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = +2

Query: 83  IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATV 187
           ++  +T GL G H     +KG+VV+M KN LDF D   ++
Sbjct: 1   MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSL 40



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>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 34.7 bits (78), Expect = 0.071
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +2

Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT 184
           RG  +KG+VVLM KN  DFN+F +T
Sbjct: 7   RGHKIKGTVVLMTKNVFDFNEFVST 31



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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +2

Query: 89  SDLTGGL-RGAHLKGSVVLMRKNALDFN 169
           S +TG L RG  +KG+VVLMRKN LD N
Sbjct: 3   SGVTGILNRGHKIKGTVVLMRKNVLDIN 30



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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
 Frame = +2

Query: 92  DLTGGLRGAH-LKGSVVLMRKNALDFN 169
           ++TG L   H ++G+VVLMRKN LDFN
Sbjct: 4   NVTGLLNKGHKIRGTVVLMRKNVLDFN 30



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>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 31.2 bits (69), Expect = 0.79
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 110 RGAHLKGSVVLMRKNALDFN 169
           RG  LKG+V+LM+KN LD N
Sbjct: 8   RGQKLKGTVILMQKNVLDIN 27



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>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 110 RGAHLKGSVVLMRKNALDFN 169
           +G  +KG+VVLM KN LDFN
Sbjct: 7   KGQKIKGTVVLMPKNVLDFN 26



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>UL14_EHV1V (P84404) Hypothetical gene 48 protein|
          Length = 317

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -3

Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 8
           GG EV + +  L HED+  L      EAPR     AAD    RS         + ARCGA
Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191



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>UL14_EHV1B (P28949) Hypothetical gene 48 protein|
          Length = 317

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -3

Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 8
           GG EV + +  L HED+  L      EAPR     AAD    RS         + ARCGA
Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191



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>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = +2

Query: 95  LTGGL--RGAHLKGSVVLMRKNALDFN 169
           + GGL  RG  +KG+VVLMRKN L  N
Sbjct: 1   MLGGLLHRGHKIKGTVVLMRKNVLHVN 27



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>IWS1_XENTR (Q505H7) IWS1-like protein|
          Length = 909

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
 Frame = -3

Query: 187 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 47
           DGGA  V+ ER  A +D+G       E G+PE   +  H D  D KH RS SG
Sbjct: 15  DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66



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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 74  VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVM 190
           +GG+   LTG   G  +KG  VLM +  LD  DF A+++
Sbjct: 2   LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLL 39



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>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 104 GLRGAHLKGSVVLMRKNALDFN 169
           G +G  +KG++V+M+KN LD N
Sbjct: 5   GQKGQKIKGTMVVMQKNVLDIN 26



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>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase)
          Length = 245

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +2

Query: 44  LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 163
           L + R  +FG G       +D T  LR   +   VVLM KNA+D
Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170



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>IWS1A_XENLA (Q6DE96) IWS1-like protein A|
          Length = 836

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = -3

Query: 187 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 65
           DGGA  V+ ER  A +D+G     E G+PE   +  H D  D KH
Sbjct: 13  DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57



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>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast|
           precursor (EC 1.4.7.1) (Fd-GOGAT)
          Length = 1616

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 115 APEAPRQVAHDAADAKHLRSISGECG 38
           AP AP++    AAD  H+ S  G CG
Sbjct: 74  APPAPQKPTQQAADLNHILSERGACG 99



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>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 113 GAHLKGSVVLMRKNALDFNDFGATV 187
           G  +KG+VVLM KN L+ N  G+ V
Sbjct: 5   GHKIKGTVVLMPKNELEVNPDGSAV 29


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,364,692
Number of Sequences: 219361
Number of extensions: 256948
Number of successful extensions: 1378
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 80,573,946
effective HSP length: 39
effective length of database: 72,018,867
effective search space used: 1728452808
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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