ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl43e10 |
|---|---|
| Clone Library Name | barley_pub |
>NUP42_YEAST (P49686) Nucleoporin NUP42 (Nuclear pore protein NUP42)| Length = 430 Score = 50.4 bits (119), Expect = 1e-06 Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 15/92 (16%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSS----NPFGAQSGFGQTS-------TATNPFGSPT---TAFGA 263 +T G +S SAFG TS+ + FGA + FG ++ + T+ FG+P+ T FGA Sbjct: 68 NTGNTGNTSISAFGNTSNAAKPSAFGAPA-FGSSAPINVNPPSTTSAFGAPSFGSTGFGA 126 Query: 264 QTGTTSPFGATSSTAG-AFGQPSAPAFGATST 356 T++PFG + + G AFGQ PAFGA T Sbjct: 127 MAATSNPFGKSPGSMGSAFGQ---PAFGANKT 155 Score = 46.2 bits (108), Expect = 2e-05 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQ--------TSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 S+ SAFG S+ P S FG S+ ++ FG PT FGA T T SPFG + Sbjct: 165 SNNSAFGAASNTPLTTTSPFGSLQQNASQNASSTSSAFGKPT--FGAATNTQSPFGTIQN 222 Query: 303 TAGAFGQPSAPAFGATSTPAFGAAP 377 T+ + G +P FG T + +P Sbjct: 223 TSTSSGTGVSP-FGTFGTNSNNKSP 246 Score = 45.4 bits (106), Expect = 3e-05 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 15/96 (15%) Frame = +3 Query: 117 MFGSTNPFGQ---SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG----T 275 M ++NPFG+ S SAFGQ + FGA +S+ +N S +AFGA + T Sbjct: 127 MAATSNPFGKSPGSMGSAFGQPA---FGANKTAIPSSSVSN---SNNSAFGAASNTPLTT 180 Query: 276 TSPFGA--------TSSTAGAFGQPSAPAFGATSTP 359 TSPFG+ SST+ AFG+P+ A T +P Sbjct: 181 TSPFGSLQQNASQNASSTSSAFGKPTFGAATNTQSP 216 Score = 41.2 bits (95), Expect = 6e-04 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 15/94 (15%) Frame = +3 Query: 126 STNPFG--QSSASAFGQTSSNPFGAQSGFGQTSTATNPFG-------------SPTTAFG 260 +T+PFG Q +AS ++S+ FG + FG + +PFG SP FG Sbjct: 180 TTSPFGSLQQNASQNASSTSSAFGKPT-FGAATNTQSPFGTIQNTSTSSGTGVSPFGTFG 238 Query: 261 AQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPA 362 + SPF S AGA P FG T++ A Sbjct: 239 TNSNNKSPFSNLQSGAGAGSSP----FGTTTSKA 268 Score = 41.2 bits (95), Expect = 6e-04 Identities = 40/105 (38%), Positives = 48/105 (45%), Gaps = 19/105 (18%) Frame = +3 Query: 120 FGSTNPF-GQSSASAFGQTSSNPFGAQSG---------FGQTSTATNP--FGSPTTAFGA 263 FG+ N G ++ SAFG FG +G FG TS A P FG+P AFG+ Sbjct: 45 FGTANTMTGGTTTSAFGMPQ---FGTNTGNTGNTSISAFGNTSNAAKPSAFGAP--AFGS 99 Query: 264 QT-------GTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAP 377 TTS FGA S + FG A ATS P FG +P Sbjct: 100 SAPINVNPPSTTSAFGAPSFGSTGFG-----AMAATSNP-FGKSP 138 Score = 32.3 bits (72), Expect = 0.28 Identities = 33/89 (37%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA-QTGTTSPFGATSSTA 308 NPF ++AS + FG S FG +T T G+ T+AFG Q GT + Sbjct: 23 NPFTNNAAST-NNMGGSAFGRPS-FGTANTMTG--GTTTSAFGMPQFGTNT--------- 69 Query: 309 GAFGQPSAPAFGATST----PAFGAAPAG 383 G G S AFG TS AFGA G Sbjct: 70 GNTGNTSISAFGNTSNAAKPSAFGAPAFG 98 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Frame = +3 Query: 141 GQSSASAFGQTSSN--PFG-AQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAG 311 G S FG S+N PF QSG G S+ PFG+ T+ S T++ Sbjct: 230 GVSPFGTFGTNSNNKSPFSNLQSGAGAGSS---PFGTTTSKANNNNNVGSSAFGTTNNQS 286 Query: 312 AFGQPSAPAFGATS 353 F S FG+ S Sbjct: 287 PFSGGSGGTFGSAS 300
>GLH4_CAEEL (O76743) ATP-dependent RNA helicase glh-4 (EC 3.6.1.-) (Germline| helicase 4) Length = 1156 Score = 50.1 bits (118), Expect = 1e-06 Identities = 41/97 (42%), Positives = 50/97 (51%), Gaps = 15/97 (15%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQ-------SGF--GQTSTATNPFGS-----PT-TAFG 260 S++ FG S + FG TSS+ G Q SGF +TST+ FGS PT T FG Sbjct: 334 SSSSFGSGSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTSGGTFGSGFGGKPTSTGFG 393 Query: 261 AQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 A + T S G TAG FG S P FG S+ FG+ Sbjct: 394 APSTTDSSSG--QQTAG-FGGASKPGFGGDSSTGFGS 427 Score = 46.2 bits (108), Expect = 2e-05 Identities = 36/92 (39%), Positives = 44/92 (47%), Gaps = 13/92 (14%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNPFGAQSGF---GQTSTATNPFGSPTT-------AFGAQTG--- 272 N FG S+S+FG S FG S GQ AT G PT FG+ G Sbjct: 328 NGFGGDSSSSFGSGSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTSGGTFGSGFGGKP 387 Query: 273 TTSPFGATSSTAGAFGQPSAPAFGATSTPAFG 368 T++ FGA S+T + GQ +A FG S P FG Sbjct: 388 TSTGFGAPSTTDSSSGQQTA-GFGGASKPGFG 418 Score = 45.1 bits (105), Expect = 4e-05 Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 13/98 (13%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGA--QSGFG--QTSTATNPFGSPT--TAFGAQTGTTSPFG 290 T FG +S FG SS FG+ ++GFG + STA N G PT T FG + FG Sbjct: 406 TAGFGGASKPGFGGDSSTGFGSGLKAGFGGHRASTAENS-GLPTETTGFGGKLPPAG-FG 463 Query: 291 ATSSTAGAFGQPS-------APAFGATSTPAFGAAPAG 383 A+SS AFGQ S FG S+ +FG +G Sbjct: 464 ASSSNESAFGQQSKGFGGATKNGFGGDSSNSFGKRDSG 501 Score = 40.0 bits (92), Expect = 0.001 Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Frame = +3 Query: 147 SSASAFGQTSSNPFGA-QSGFGQTSTATNP---FGSPTTAFGAQ---TGTTSPFGATSST 305 SSA+ F Q GA SGFG S TN + TT GA T S FG + Sbjct: 156 SSANNFDQQDKGFGGAASSGFGNGSMLTNQKVGLENQTTGVGASEVPTSKPSSFGQQPAV 215 Query: 306 AGAFGQPSAPAFGATSTPAFGAAPAG 383 FG + FG +S+ FG AG Sbjct: 216 VSGFGGAAKMGFGGSSSSGFGGQKAG 241 Score = 38.9 bits (89), Expect = 0.003 Identities = 27/77 (35%), Positives = 36/77 (46%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 FG S++ FG FG G G + + + TT FG + + FGA+SS AF Sbjct: 260 FGGDSSTGFGSGLKAGFG---GHGAGAAENSGLPTETTGFGGKLPSAG-FGASSSNESAF 315 Query: 318 GQPSAPAFGATSTPAFG 368 GQ S FG + FG Sbjct: 316 GQQS-KGFGGATKNGFG 331 Score = 38.5 bits (88), Expect = 0.004 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 15/101 (14%) Frame = +3 Query: 126 STNPFGQSSASAFG------------QTSSNPFGAQ---SGFGQTSTATNPFGSPTTAFG 260 S+ FG + FG T + FG + +GFG +S+ + FG + FG Sbjct: 264 SSTGFGSGLKAGFGGHGAGAAENSGLPTETTGFGGKLPSAGFGASSSNESAFGQQSKGFG 323 Query: 261 AQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 T + FG SS++ FG S FG TS+ G G Sbjct: 324 G--ATKNGFGGDSSSS--FGSGSKAGFGGTSSSGIGGQKPG 360 Score = 34.3 bits (77), Expect = 0.075 Identities = 27/82 (32%), Positives = 36/82 (43%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 FG ++ FG +SS+ FG GQ + AT G PT +T T+ P F Sbjct: 219 FGGAAKMGFGGSSSSGFG-----GQKAGATESSGFPTK----ETSTSQP---------GF 260 Query: 318 GQPSAPAFGATSTPAFGAAPAG 383 G S+ FG+ FG AG Sbjct: 261 GGDSSTGFGSGLKAGFGGHGAG 282
>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58| Length = 546 Score = 49.7 bits (117), Expect = 2e-06 Identities = 45/104 (43%), Positives = 53/104 (50%), Gaps = 17/104 (16%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNP-FGAQ---SGFGQTSTATNPFGSP--TTAFGAQTGTTS 281 FG+ + +FG +S P FGA + AT FG+P T AFGA T Sbjct: 22 FGARPATTTAPPPSFGAATSTPTFGAAPATTSLFAAPAATPAFGAPAATPAFGAPASTPG 81 Query: 282 PFGATSSTAGAFGQPSA-PAFG---ATS-------TPAFGAAPA 380 FGATS+ A AFG +A PAFG ATS TPAFGAA A Sbjct: 82 -FGATSTAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAA 124 Score = 47.4 bits (111), Expect = 9e-06 Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 5/90 (5%) Frame = +3 Query: 126 STNPFGQSSAS-AFGQTSSNP-FGAQSGFGQTSTATNPFGSP--TTAFGAQTGTTSPFGA 293 +T+ FG +A+ AFG ++ P FGA + AT FG+P T+AFGA TT+ FGA Sbjct: 106 ATSAFGAPAATPAFGAAAATPAFGAPA-------ATPAFGAPAATSAFGAPAATTA-FGA 157 Query: 294 TSST-AGAFGQPSAPAFGATSTPAFGAAPA 380 +ST A AFG P APA G + A PA Sbjct: 158 PASTQASAFGAP-APAVGTVAPTFSFATPA 186 Score = 46.6 bits (109), Expect = 1e-05 Identities = 36/82 (43%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQ 323 + A AFG + FG TST T TT+ A T FGA ++T AFG Sbjct: 17 TGAFAFGARPATTTAPPPSFGAATSTPTFGAAPATTSLFAAPAATPAFGAPAATP-AFGA 75 Query: 324 P-SAPAFGATST--PAFGAAPA 380 P S P FGATST PAFG A A Sbjct: 76 PASTPGFGATSTAAPAFGTAAA 97 Score = 46.2 bits (108), Expect = 2e-05 Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 5/87 (5%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNP-FGSPTTA--FGAQTGTTSPFGAT 296 + N G ++A+ T + FGA+ T+TA P FG+ T+ FGA TTS F A Sbjct: 6 TNNAIGGATAA----TGAFAFGARPA---TTTAPPPSFGAATSTPTFGAAPATTSLFAAP 58 Query: 297 SSTAGAFGQPSA-PAFGA-TSTPAFGA 371 ++T AFG P+A PAFGA STP FGA Sbjct: 59 AATP-AFGAPAATPAFGAPASTPGFGA 84 Score = 45.4 bits (106), Expect = 3e-05 Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 13/98 (13%) Frame = +3 Query: 126 STNPFGQSS--ASAFGQTSSNP-FG---AQSGFGQTSTATNPFGSP--TTAFGAQTGTTS 281 ST FG +S A AFG ++ P FG A S FG + AT FG+ T AFGA T + Sbjct: 78 STPGFGATSTAAPAFGTAAATPAFGIPAATSAFGAPA-ATPAFGAAAATPAFGAPAATPA 136 Query: 282 PFGATSSTAGAFGQPSA-PAFGA---TSTPAFGA-APA 380 FGA ++T+ AFG P+A AFGA T AFGA APA Sbjct: 137 -FGAPAATS-AFGAPAATTAFGAPASTQASAFGAPAPA 172 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 9/45 (20%) Frame = +3 Query: 273 TTSPFGATSSTAGAF---GQPSA-----PAFG-ATSTPAFGAAPA 380 T + G ++ GAF +P+ P+FG ATSTP FGAAPA Sbjct: 6 TNNAIGGATAATGAFAFGARPATTTAPPPSFGAATSTPTFGAAPA 50 Score = 30.8 bits (68), Expect = 0.83 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Frame = +3 Query: 126 STNPFGQSSAS-AFG---QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 +T+ FG +A+ AFG T ++ FGA + T T F +P T+ FG Sbjct: 142 ATSAFGAPAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPTTAPPAFGFGT 201 Query: 294 TSSTAGA 314 T++TA A Sbjct: 202 TATTAAA 208
>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1199 Score = 48.9 bits (115), Expect = 3e-06 Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 18/106 (16%) Frame = +3 Query: 120 FGSTNPFGQSSASA---------FGQTSSNPFG----AQSGFGQTSTATNPFGSPTTAFG 260 FGS+ FG S ASA FG + FG + S FG ++ FGS T+ F Sbjct: 953 FGSSFTFGNSVASAPSAAPAPAAFGGAAQPAFGGLKASASTFGTPASTQPAFGSTTSVFS 1012 Query: 261 AQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPA---FG--AAPAG 383 + TTS FGA ++T S+ + +STP+ FG AAPAG Sbjct: 1013 FGSATTSGFGAAAATTQTTHSGSSSSLFGSSTPSPFTFGGSAAPAG 1058 Score = 44.3 bits (103), Expect = 7e-05 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 3/91 (3%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 FGST +S +FG +++ FGA + QT+ + GS ++ FG+ T + FG ++ Sbjct: 1004 FGST-----TSVFSFGSATTSGFGAAAATTQTTHS----GSSSSLFGSSTPSPFTFGGSA 1054 Query: 300 STA--GAFGQPSAPAFGATS-TPAFGAAPAG 383 + A G FG + P G+TS T +FG+ +G Sbjct: 1055 APAGGGGFGLSATPGTGSTSGTFSFGSGQSG 1085 Score = 42.0 bits (97), Expect = 4e-04 Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 13/101 (12%) Frame = +3 Query: 117 MFGSTNP----FGQSSASA----FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG 272 +FGS+ P FG S+A A FG +++ G+ SG + + TT+FG Sbjct: 1039 LFGSSTPSPFTFGGSAAPAGGGGFGLSATPGTGSTSGTFSFGSGQSGTTGTTTSFGGSLS 1098 Query: 273 TTSPFGATSSTAGAFG----QPSAPAFGATSTPAFG-AAPA 380 + + S+ AF S P FG TSTP FG +APA Sbjct: 1099 QNTLGAPSQSSPFAFSVGSTPESKPVFGGTSTPTFGQSAPA 1139 Score = 35.4 bits (80), Expect = 0.034 Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Frame = +3 Query: 123 GSTNPFGQS-SASAFGQTS-SNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 296 G+T FG S S + G S S+PF G T + FG +T Q+ G T Sbjct: 1088 GTTTSFGGSLSQNTLGAPSQSSPFAFS--VGSTPESKPVFGGTSTPTFGQSAPAPGVGTT 1145 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGA 371 S+ +FG PS PA G FG+ Sbjct: 1146 GSSL-SFGAPSTPAQGFVGVGPFGS 1169 Score = 32.3 bits (72), Expect = 0.28 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = +3 Query: 126 STNPFGQSS-ASAFGQTSSN-PFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 284 ST FGQS+ A G T S+ FGA S Q PFGS +F G+ +P Sbjct: 1129 STPTFGQSAPAPGVGTTGSSLSFGAPSTPAQGFVGVGPFGSGAPSFSIGAGSKTP 1183
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 48.5 bits (114), Expect = 4e-06 Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 21/104 (20%) Frame = +3 Query: 120 FGSTNP--FGQSS---ASAFGQTSSNP----------FGAQSGFGQTSTATNPFGSPTTA 254 FG+T P FGQ++ AS FGQ++S+ F + FGQ +++T P + + Sbjct: 1713 FGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASST-PTSTSGSV 1771 Query: 255 FGAQTGTTS----PFGATSSTAGA--FGQPSAPAFGATSTPAFG 368 FGA + T+S FG +S G FGQ +APAFG +P FG Sbjct: 1772 FGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFG--QSPGFG 1813 Score = 44.7 bits (104), Expect = 6e-05 Identities = 37/97 (38%), Positives = 43/97 (44%), Gaps = 10/97 (10%) Frame = +3 Query: 120 FGST------NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 281 FGST N FG S A FG +S+ FG Q G S+ S F + T Sbjct: 1910 FGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQGFGF-SSPNKTG 1968 Query: 282 PFGATSSTAGAFGQP----SAPAFGATSTPAFGAAPA 380 FGA A FG P +P FG PAFG+APA Sbjct: 1969 GFGA----APVFGSPPTFGGSPGFG--GVPAFGSAPA 1999 Score = 43.1 bits (100), Expect = 2e-04 Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 8/91 (8%) Frame = +3 Query: 135 PFGQSSASAFGQTSSNPFGAQSG---FGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 P SS+SAF Q ++N A S FGQ + +T P + FG QTG+T+ ST Sbjct: 1648 PPAASSSSAFNQLTNNTATAPSATPVFGQVAASTAP-----SLFGQQTGSTA------ST 1696 Query: 306 AGAFGQP-----SAPAFGATSTPAFGAAPAG 383 A A Q S+PAFG T+ FG G Sbjct: 1697 AAATPQVSSSGFSSPAFGTTAPGVFGQTTFG 1727 Score = 41.6 bits (96), Expect = 5e-04 Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 23/106 (21%) Frame = +3 Query: 120 FGSTNP---FGQSSASA---FGQTSSNPFGAQSGFGQTSTA-----------------TN 230 FGS+N FGQ++++ FGQ SS+ G+ G G T N Sbjct: 1842 FGSSNTGSVFGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKN 1901 Query: 231 PFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFG 368 PF S + FG+ ATS+T+ FG A FG ++ +FG Sbjct: 1902 PFSSASGGFGST--------ATSNTSNLFGNSGAKTFGGFASSSFG 1939 Score = 41.6 bits (96), Expect = 5e-04 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 17/103 (16%) Frame = +3 Query: 126 STNPFGQSSASA----FGQTSSNPFGAQSGFGQ------------TSTATNPFGSPTTAF 257 S+ FGQSS + FGQ+++ FG GFGQ T+ AT+ F + Sbjct: 1782 SSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASG 1841 Query: 258 GAQTGTTSPFGATSSTAG-AFGQPSAPAFGATSTPAFGAAPAG 383 + T S FG +ST G FGQ S+ + G+ FG+ G Sbjct: 1842 FGSSNTGSVFGQAASTGGIVFGQQSSSSSGS----VFGSGNTG 1880 Score = 39.3 bits (90), Expect = 0.002 Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 17/100 (17%) Frame = +3 Query: 126 STNP--FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-GTTSPFGAT 296 ST P FGQ + S ++ P + SGF + T G FG T G S FG + Sbjct: 1680 STAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPG----VFGQTTFGQASVFGQS 1735 Query: 297 SSTAG---AFGQP---SAPAFG--ATSTP------AFGAA 374 +S+A +F QP S PAFG A+STP FGAA Sbjct: 1736 ASSAASVFSFSQPGFSSVPAFGQPASSTPTSTSGSVFGAA 1775 Score = 37.4 bits (85), Expect = 0.009 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%) Frame = +3 Query: 120 FGS----TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT----AFGAQTGT 275 FGS T+P G + FG+ ++ GFG +S T+ FG+ + FG+ + Sbjct: 1994 FGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSNTTS-FGTLASQNAPTFGSLSQQ 2052 Query: 276 TSPFGATSSTAGAFGQPSAP-AFGATSTPAFG 368 TS FG SS FG + +FG+ ++ G Sbjct: 2053 TSGFGTQSSGFSGFGSGTGGFSFGSNNSSVQG 2084 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Frame = +3 Query: 126 STNPFGQSSASAFGQTS-SNPFGAQSGFGQTSTA-----TNPFGSPTTAFGAQTGTTSPF 287 ST P ++S+++ T + G SGF T+ T P P T+ T P Sbjct: 1345 STKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEP---PVTSSATTTSVAPPA 1401 Query: 288 GATSSTAGAFGQPSAPAFGATSTPAFG 368 ++S+ FG + G++ +FG Sbjct: 1402 ATSTSSTAVFGSLPVTSAGSSGVISFG 1428
>NUP54_DROME (Q9V6B9) Probable nucleoporin Nup54| Length = 610 Score = 48.1 bits (113), Expect = 5e-06 Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 FGS G +S A +T+ FG S FG T+ + P AFGAQ +T FGA Sbjct: 4 FGSNTSLGATSTPA--KTTGGLFG--SPFGGTAATSQP----APAFGAQATSTPAFGAQP 55 Query: 300 STAGAFGQPSAPAFGAT-STPAFGAA 374 +T+ AFG S AFGAT + PAFGAA Sbjct: 56 ATS-AFGAGS--AFGATAAAPAFGAA 78 Score = 45.1 bits (105), Expect = 4e-05 Identities = 33/67 (49%), Positives = 38/67 (56%), Gaps = 2/67 (2%) Frame = +3 Query: 186 FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGA--TSTP 359 FG+ + G TST G FG SPFG T++T+ QP APAFGA TSTP Sbjct: 4 FGSNTSLGATSTPAKTTGG---LFG------SPFGGTAATS----QP-APAFGAQATSTP 49 Query: 360 AFGAAPA 380 AFGA PA Sbjct: 50 AFGAQPA 56 Score = 38.9 bits (89), Expect = 0.003 Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP----F 287 FG+ Q+ TS+ P A SGFGQ + A+ S + FG T T++P F Sbjct: 115 FGAAPATSQAGLFGAPATSAAP-PAFSGFGQQAAASTAPASGFSGFGTTT-TSAPAFGGF 172 Query: 288 GATSST---AGAFGQPSAPAFGATSTPAFG 368 G + ST GAFG T TP FG Sbjct: 173 GTSQSTGFGGGAFGSTFGKPANTTVTPGFG 202
>NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nup189)| Length = 1778 Score = 48.1 bits (113), Expect = 5e-06 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 9/91 (9%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSSNPFGAQSG---FGQTSTATNP-----FGSPTTAFGAQTG 272 +FG+ N + + FG +S QS FG T+ ATNP FGS T A TG Sbjct: 67 LFGNRNNTTTTGGTGFGMSSGTGMFGQSNTPAFGGTNNATNPSGGGLFGSNTANNNANTG 126 Query: 273 TTSPFGATSSTAGAFGQPSAPA-FGATSTPA 362 T+ FG+ + + G Q + FG+++TPA Sbjct: 127 TSFSFGSNAGSTGFGSQGTGGGLFGSSTTPA 157 Score = 45.1 bits (105), Expect = 4e-05 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT-AFGAQTGTTSPFGA 293 M T FGQS+ AFG T++ + G ++TA N + T+ +FG+ G+T FG+ Sbjct: 84 MSSGTGMFGQSNTPAFGGTNNATNPSGGGLFGSNTANNNANTGTSFSFGSNAGSTG-FGS 142 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGAA 374 + G FG + PA +T AFG + Sbjct: 143 QGTGGGLFGSSTTPA----TTNAFGTS 165 Score = 44.3 bits (103), Expect = 7e-05 Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 24/103 (23%) Frame = +3 Query: 117 MFGSTNPFGQSSAS-AFGQTSSNP---FGAQSG------FGQTSTATNPFGSPTT----- 251 MFG N G + AFGQ + FG+ S FG +T+T FG TT Sbjct: 1 MFGQNNSSGFGGGTGAFGQNNQQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQNTTQPLFG 60 Query: 252 ------AFGAQTGTTSPFG---ATSSTAGAFGQPSAPAFGATS 353 FG + TT+ G SS G FGQ + PAFG T+ Sbjct: 61 SNTNGGLFGNRNNTTTTGGTGFGMSSGTGMFGQSNTPAFGGTN 103 Score = 39.3 bits (90), Expect = 0.002 Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 7/90 (7%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNP------FGSPTTAFGAQTGTTS 281 FGST FG +S + FGQ S + FG TS ATN FG +AFG+ T T Sbjct: 239 FGSTPAFG-ASTTPFGQNLSGTTNNATPFG-TSNATNTTPGSGLFGG-GSAFGSNTTNTG 295 Query: 282 -PFGATSSTAGAFGQPSAPAFGATSTPAFG 368 G +++ G FGQ + TSTP+ G Sbjct: 296 FGSGTNNASGGLFGQNN----NTTSTPSTG 321 Score = 38.5 bits (88), Expect = 0.004 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 11/100 (11%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFG--------QTSTATNPFGSPTTAFGAQTG 272 MFGS N FG T +N + +G G T+T + F P+T G G Sbjct: 527 MFGSANS-STPGTGLFGSTQTNNATSNTGTGLFGSNNANTTNTGGSLFNKPSTTTGGLFG 585 Query: 273 TTSPFGATSSTAGAFGQPSAPAFGATS---TPAFGAAPAG 383 T+ +++T+G FG + TS T FG + AG Sbjct: 586 NTTAQQPSTTTSGLFGASNTNNQAQTSNFGTGLFGGSQAG 625 Score = 36.6 bits (83), Expect = 0.015 Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 10/98 (10%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQ---TSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTT 278 FGS +S FGQ T+S P FG S F Q A + FGS T TG T Sbjct: 296 FGSGT--NNASGGLFGQNNNTTSTPSTGLFGG-STFNQQKPAFSGFGSTTNTTNTGTG-T 351 Query: 279 SPFGATSSTAGAFGQPSAPAFGATST---PAFGAAPAG 383 FG+ ++T GQ + FG +T FG++ G Sbjct: 352 GLFGSNNATNTGTGQTTGGLFGGAATGTGTGFGSSTGG 389 Score = 35.8 bits (81), Expect = 0.026 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 21/100 (21%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNP--------------------FGAQSGFGQTSTATNPFG 239 FGST S +FGQ ++N FG T+TATN G Sbjct: 452 FGSTTTTPASGGFSFGQNANNAPKPAFGSTATTAPKPAGTGLFGGLGAGANTNTATNATG 511 Query: 240 SPTTAFG-AQTGTTSPFGATSSTAGAFGQPSAPAFGATST 356 + + FG A T ++ FG+ +S+ P FG+T T Sbjct: 512 TGGSLFGNANTAGSNMFGSANSST-----PGTGLFGSTQT 546 Score = 35.8 bits (81), Expect = 0.026 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 29/116 (25%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQS------GFGQTSTATNPFGSPTTAFGAQTGTTSP 284 G+ FG SS FG ++N + + GFG + N +PT+ FG + Sbjct: 378 GTGTGFG-SSTGGFGSNTNNQPNSGTMGTGLFGFGANNNTANNNTAPTSTFGGNNSSNFS 436 Query: 285 FGATSSTAG-------------------AFGQPS----APAFGATSTPAFGAAPAG 383 FGA ++ A +FGQ + PAFG+T+T A PAG Sbjct: 437 FGANNNAATKPSGFGFGSTTTTPASGGFSFGQNANNAPKPAFGSTATTA--PKPAG 490 Score = 32.3 bits (72), Expect = 0.28 Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 20/105 (19%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSSNP-FGAQS-----------------GFGQTSTATNPFG- 239 +FGS N +S + FGQ ++ P FG+ + GFG +S T FG Sbjct: 39 LFGSQN----TSTTGFGQNTTQPLFGSNTNGGLFGNRNNTTTTGGTGFGMSS-GTGMFGQ 93 Query: 240 SPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTP-AFGA 371 S T AFG T+P G G FG +A T T +FG+ Sbjct: 94 SNTPAFGGTNNATNPSG-----GGLFGSNTANNNANTGTSFSFGS 133 Score = 31.6 bits (70), Expect = 0.48 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST----- 305 G+ +A +++ FG+ FG +T PFG T +PFG +++T Sbjct: 224 GRRFGNASSTNTTSAFGSTPAFG---ASTTPFGQ---NLSGTTNNATPFGTSNATNTTPG 277 Query: 306 AGAFGQPSAPAFGATST 356 +G FG S AFG+ +T Sbjct: 278 SGLFGGGS--AFGSNTT 292 Score = 31.2 bits (69), Expect = 0.63 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 13/98 (13%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-------- 284 T+ F S+A+A T++ P+ S + T+ F S T ++ + Sbjct: 164 TSGFVSSNANAVNGTANPPYAVTSEKDPQTNGTSVFQSITCMPAYRSYSFEELRLQDYNQ 223 Query: 285 ---FGATSST--AGAFGQPSAPAFGATSTPAFGAAPAG 383 FG SST AFG S PAFGA++TP FG +G Sbjct: 224 GRRFGNASSTNTTSAFG--STPAFGASTTP-FGQNLSG 258
>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)| Length = 518 Score = 47.0 bits (110), Expect = 1e-05 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-----GTTSPFG 290 S+ P+GQ S S +GQ++ SG+GQ+S ++ + T +G Q+ G+T +G Sbjct: 29 SSQPYGQQSYSGYGQSADT-----SGYGQSSYGSSYGQTQNTGYGTQSAPQGYGSTGGYG 83 Query: 291 ATSSTAGAFGQPSA-PAFGATSTPA 362 ++ S+ ++GQ S+ P +G P+ Sbjct: 84 SSQSSQSSYGQQSSYPGYGQQPAPS 108 Score = 34.7 bits (78), Expect = 0.057 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Frame = +3 Query: 120 FGSTNPFG--QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 +GST +G QSS S++GQ SS P G+GQ +P++ G+ G Sbjct: 76 YGSTGGYGSSQSSQSSYGQQSSYP-----GYGQQP-------APSSTSGSYGG------- 116 Query: 294 TSSTAGAFGQPSAPAFGATS 353 SS + ++GQP + +G S Sbjct: 117 -SSQSSSYGQPQSGGYGQQS 135 Score = 33.1 bits (74), Expect = 0.17 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFG---QTSTATNPFGSPTTAFGAQTG-TTSPFGATSSTA 308 G S +S++GQ S +G QSG+G Q+ +P +G Q +S G Sbjct: 116 GSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYGQQNQYNSSSGGGGGGGG 175 Query: 309 GAFGQPSAPAFGATSTPAFG 368 G +GQ + G +G Sbjct: 176 GNYGQDQSSMSGGGGGGGYG 195
>YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I| Length = 598 Score = 47.0 bits (110), Expect = 1e-05 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 12/95 (12%) Frame = +3 Query: 123 GSTNPFGQSS----ASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 290 GS N G S +SA G ++NP G+ FG ++ + N FG P + T TT+P Sbjct: 112 GSANSTGDKSKNTASSATGAATTNPSGSTFNFGSSNNSFN-FGKPAST----TNTTTP-- 164 Query: 291 ATSSTAGAFGQPSA--------PAFGATSTPAFGA 371 A +ST FG+P+A PA ++TPA G+ Sbjct: 165 AAASTGSLFGKPAATGTTSNAPPASSTSTTPATGS 199 Score = 32.7 bits (73), Expect = 0.22 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 10/89 (11%) Frame = +3 Query: 126 STNPFGQSSASAFGQ-----TSSN--PFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 284 +T P S+ S FG+ T+SN P + S T + FG P + +TS Sbjct: 161 TTTPAAASTGSLFGKPAATGTTSNAPPASSTSTTPATGSGGFSFGKPASLGSTNNASTS- 219 Query: 285 FGATSSTAGAFGQP---SAPAFGATSTPA 362 T+++ +FG+P SAP T TP+ Sbjct: 220 --TTANSGFSFGKPATTSAPGSNTTVTPS 246 Score = 31.6 bits (70), Expect = 0.48 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 4/89 (4%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF-GATSS 302 + P +SA TS+ FG TS T + T+ + T P GA + Sbjct: 309 TNKPTAPNSAFTKPATSTGDNKPTFSFGNTSKPTENTSTTATSAPPLSNNTKPAEGANQT 368 Query: 303 TAG-AFGQPSAPAFGATST--PAFGAAPA 380 ++G +FG+P+ +TS P FG PA Sbjct: 369 SSGFSFGKPATDTTTSTSKTGPLFGNKPA 397 Score = 29.6 bits (65), Expect = 1.8 Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 14/94 (14%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFG----QTSSNPFGAQSG----FGQTSTATNPFGSP------TTA 254 +FGS N S+ S F T+ N A + FG T+T P +T Sbjct: 53 LFGSNNASNTSAPSTFSFGKAATTGNSTNASTSSPFSFGSTNTNNTAGAKPLFGGLGSTG 112 Query: 255 FGAQTGTTSPFGATSSTAGAFGQPSAPAFGATST 356 TG S A+S+T A PS F S+ Sbjct: 113 SANSTGDKSKNTASSATGAATTNPSGSTFNFGSS 146 Score = 28.1 bits (61), Expect = 5.4 Identities = 23/77 (29%), Positives = 34/77 (44%) Frame = +3 Query: 144 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQ 323 Q+S +FG+ + AQ T AT FG+ T + +T+ + G FG Sbjct: 9 QNSGFSFGKPAQPNSAAQGA--ATPAATGLFGN----------TNNNTSSTAPSGGLFGS 56 Query: 324 PSAPAFGATSTPAFGAA 374 +A A ST +FG A Sbjct: 57 NNASNTSAPSTFSFGKA 73
>NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98| kDa nucleoporin) Length = 937 Score = 47.0 bits (110), Expect = 1e-05 Identities = 33/88 (37%), Positives = 44/88 (50%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 FG+T+ FGQ++ FG TS FG S FG +S FG+ T G GT+S + Sbjct: 16 FGTTSTFGQNTG--FGTTSGGAFGT-SAFGSSSNTGGLFGNSQTKPGGLFGTSSLSQPAT 72 Query: 300 STAGAFGQPSAPAFGATSTPAFGAAPAG 383 ST+ FG ++ TS FG A G Sbjct: 73 STSTGFGFGTST---GTSNSLFGTANTG 97 Score = 45.8 bits (107), Expect = 2e-05 Identities = 34/96 (35%), Positives = 41/96 (42%), Gaps = 10/96 (10%) Frame = +3 Query: 120 FGSTNPFGQSSASA---FGQTSSNPFGAQSGFGQTS-------TATNPFGSPTTAFGAQT 269 FG+T+ GQ S + FG T ++ G G + T T FG P T FGA Sbjct: 301 FGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAVG 360 Query: 270 GTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAP 377 T FG T SAP+FG TS FG P Sbjct: 361 STL--FGNNKLTTFGTSTTSAPSFGTTSGGLFGNKP 394 Score = 44.3 bits (103), Expect = 7e-05 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 18/100 (18%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFG-------AQSGFGQTSTATNPFGSPTTAF-----------GA 263 FG SS S ++S FG + S FG +T T+ F S AF G Sbjct: 62 FGTSSLSQPATSTSTGFGFGTSTGTSNSLFGTANTGTSLFSSQNNAFAQNKPTGFGNFGT 121 Query: 264 QTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 T + FG T++T+ FG S FG +S F AAP G Sbjct: 122 STSSGGLFGTTNTTSNPFGNTSGSLFGPSS---FTAAPTG 158 Score = 43.1 bits (100), Expect = 2e-04 Identities = 26/65 (40%), Positives = 32/65 (49%) Frame = +3 Query: 162 FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAF 341 F ++ PFG GFG TST G TT+ GA TS FG++S+T G FG Sbjct: 2 FNKSFGTPFGGTGGFGTTSTFGQNTGFGTTSGGA--FGTSAFGSSSNTGGLFGNSQTKPG 59 Query: 342 GATST 356 G T Sbjct: 60 GLFGT 64 Score = 37.0 bits (84), Expect = 0.012 Identities = 33/104 (31%), Positives = 43/104 (41%), Gaps = 19/104 (18%) Frame = +3 Query: 117 MFGSTN--PFGQSSASA--FGQTSSNPFG-------------AQSGFGQTSTATNPFGSP 245 +FG+ FG S+ SA FG TS FG + GFG ++ ++ FGS Sbjct: 363 LFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNNSGSSIFGSK 422 Query: 246 TTAFGAQTGTTSPFGAT--SSTAGAFGQPSAPAFGATSTPAFGA 371 A TG + FG + A FG G T AFGA Sbjct: 423 PAAGTLGTGLGTGFGTALGAGQASLFGNNQPKIGGPLGTGAFGA 466 Score = 31.6 bits (70), Expect = 0.48 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%) Frame = +3 Query: 237 GSPTTAFGAQTGTTSPFG----ATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 G+ T FG+ T+S G +T+++A ++GQ + AFG TST FG P G Sbjct: 221 GTTTGLFGSSPATSSATGLFSSSTTNSAFSYGQ-NKTAFG-TSTTGFGTNPGG 271
>NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 precursor| [Contains: Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98 kDa nucleoporin); Nuclear pore complex protein Nup96 (Nucleoporin Nup96) (96 kDa nucleoporin)] Length = 1729 Score = 46.2 bits (108), Expect = 2e-05 Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 23/112 (20%) Frame = +3 Query: 117 MFGS--TNPFGQSSASAFGQTSSNP-----FGAQSG-----FGQTSTATNPFGSPTTAF- 257 +FG+ T P G S+F Q +++ FG +G FG ST T+ F S AF Sbjct: 51 LFGNSQTKPGGLFGTSSFSQPATSTSTGFGFGTSTGTANTLFGTASTGTSLFSSQNNAFA 110 Query: 258 ----------GAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 G T + FG T++T+ FG S FG +S F AAP G Sbjct: 111 QNKPTGFGNFGTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSS---FTAAPTG 159 Score = 44.7 bits (104), Expect = 6e-05 Identities = 31/88 (35%), Positives = 44/88 (50%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 FG+T+ FGQ++ FG TS FG S FG ++ FG+ T G GT+S + Sbjct: 17 FGTTSTFGQNTG--FGTTSGGAFGT-SAFGSSNNTGGLFGNSQTKPGGLFGTSSFSQPAT 73 Query: 300 STAGAFGQPSAPAFGATSTPAFGAAPAG 383 ST+ FG ++ T+ FG A G Sbjct: 74 STSTGFGFGTST---GTANTLFGTASTG 98 Score = 43.9 bits (102), Expect = 9e-05 Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 5/93 (5%) Frame = +3 Query: 120 FGSTNPFGQSSASA---FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 290 FG+T+ GQ S + FG T ++ G G ++ FG+ T FG T + FG Sbjct: 302 FGNTSTIGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQ---TNTGFG 358 Query: 291 ATSSTAGAFGQPSAPAFGA--TSTPAFGAAPAG 383 A ST FG FG+ TS P+FG G Sbjct: 359 AVGST--LFGNNKLTTFGSSTTSAPSFGTTSGG 389 Score = 39.7 bits (91), Expect = 0.002 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = +3 Query: 162 FGQTSSNPFGAQSG-FGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPA 338 F ++ PFG +G FG TST G TT+ GA TS FG++++T G FG Sbjct: 2 FNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGA--FGTSAFGSSNNTGGLFGNSQTKP 59 Query: 339 FGATSTPAF 365 G T +F Sbjct: 60 GGLFGTSSF 68 Score = 37.4 bits (85), Expect = 0.009 Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 9/95 (9%) Frame = +3 Query: 117 MFGSTNP-FGQSSASAFGQTSSNPFGAQS----GFGQTSTATNPFGS-PTTAFGAQTGTT 278 +FG TN FG ++ FG FG+ + FG TS FG+ PT G T T+ Sbjct: 349 LFGQTNTGFGAVGSTLFGNNKLTTFGSSTTSAPSFGTTSGGL--FGNKPTLTLGTNTNTS 406 Query: 279 SPFGATSSTAG--AFGQPSAPAFGATSTPA-FGAA 374 + FG ++T+G FG AP T A FG A Sbjct: 407 N-FGFGTNTSGNSIFGSKPAPGTLGTGLGAGFGTA 440 Score = 31.2 bits (69), Expect = 0.63 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +3 Query: 237 GSPTTAFGAQTGTTSPFG----ATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 G+ T FG+ T+S G +T+++ A+GQ + AFG TST FG P G Sbjct: 222 GTTTGLFGSSPATSSATGLFSSSTTNSGFAYGQ-NKTAFG-TSTTGFGTNPGG 272 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/48 (43%), Positives = 24/48 (50%) Frame = +3 Query: 231 PFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAA 374 PFG T F GTTS FG + FG S AFG T AFG++ Sbjct: 9 PFGGGTGGF----GTTSTFGQNT----GFGTTSGGAFG---TSAFGSS 45
>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) Length = 1200 Score = 46.2 bits (108), Expect = 2e-05 Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 26/104 (25%) Frame = +3 Query: 147 SSASAFGQTSSNPF--------GAQSGFGQTSTATNPFGSPTTAFGA----QTGTTSPFG 290 SS+S FG ++ +PF GFG ++T S T +FG+ GTT+ FG Sbjct: 1037 SSSSLFGSSAPSPFTFGGSAAPAGSGGFGLSATPGTSSTSGTFSFGSGQSGTPGTTTSFG 1096 Query: 291 ATS-STAGAFGQ------------PSAPAFGATSTPAFG-AAPA 380 + S +T GA Q S P FG TSTP FG +APA Sbjct: 1097 SLSQNTLGAPSQGSPFAFSVGSTPESKPVFGGTSTPTFGQSAPA 1140 Score = 42.0 bits (97), Expect = 4e-04 Identities = 33/82 (40%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Frame = +3 Query: 120 FGSTNPFGQSSASA-FGQTSSNPFG--AQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 290 FGS+ FG S ASA + FG AQ FG A + FG+P + A TTS F Sbjct: 952 FGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLKAAASTFGAPASTQPAFGSTTSVFS 1011 Query: 291 ATSSTAGAFGQPSAPAFGATST 356 S+T FG A A AT+T Sbjct: 1012 FGSATTSGFG---AAATAATTT 1030 Score = 38.5 bits (88), Expect = 0.004 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGAT 296 FGS + ++FG S N GA S Q S GS + GT++P FG + Sbjct: 1081 FGSGQSGTPGTTTSFGSLSQNTLGAPS---QGSPFAFSVGSTPESKPVFGGTSTPTFGQS 1137 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 + G S+ +FGA+STPA G G Sbjct: 1138 APAPGVGTTGSSLSFGASSTPAQGFVGVG 1166 Score = 37.7 bits (86), Expect = 0.007 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 11/86 (12%) Frame = +3 Query: 138 FGQSSASAFG--QTSSNPFGA----QSGFGQTSTATNPFGSPTTA-FG--AQTGTTSPFG 290 FG ++ AFG + +++ FGA Q FG T T+ FGS TT+ FG A TT+ Sbjct: 975 FGSAAQPAFGGLKAAASTFGAPASTQPAFGST-TSVFSFGSATTSGFGAAATAATTTQTT 1033 Query: 291 ATSSTAGAFGQ--PSAPAFGATSTPA 362 + S++ FG PS FG ++ PA Sbjct: 1034 NSGSSSSLFGSSAPSPFTFGGSAAPA 1059 Score = 37.4 bits (85), Expect = 0.009 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 25/113 (22%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-------GTT 278 FGST +S +FG +++ FGA + T+ TN GS ++ FG+ G+ Sbjct: 1003 FGST-----TSVFSFGSATTSGFGAAATAATTTQTTNS-GSSSSLFGSSAPSPFTFGGSA 1056 Query: 279 SPFGA----------TSSTAGAF----GQPSAP----AFGATSTPAFGAAPAG 383 +P G+ TSST+G F GQ P +FG+ S GA G Sbjct: 1057 APAGSGGFGLSATPGTSSTSGTFSFGSGQSGTPGTTTSFGSLSQNTLGAPSQG 1109 Score = 33.1 bits (74), Expect = 0.17 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = +3 Query: 126 STNPFGQSS-ASAFGQTSSN-PFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 284 ST FGQS+ A G T S+ FGA S Q PFGS +F G+ +P Sbjct: 1130 STPTFGQSAPAPGVGTTGSSLSFGASSTPAQGFVGVGPFGSAAPSFSIGAGSKTP 1184 Score = 32.7 bits (73), Expect = 0.22 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%) Frame = +3 Query: 150 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSP-TTAFGAQTGTTSPFGATSSTA------ 308 +ASA G + S P + + +++ + FGS TT+ A T+ P S+T Sbjct: 856 AASAAGTSFSQPLASSTQTAASNSGFSGFGSTLTTSTSAPATTSQPTLTFSNTVTPTFNI 915 Query: 309 --GAFGQPSAPAF-GATSTPAFGA 371 + +P+ P + GA S P FGA Sbjct: 916 PFSSSAKPALPTYPGANSQPTFGA 939 Score = 31.2 bits (69), Expect = 0.63 Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 18/105 (17%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQ---TSSNPFGAQSGFGQTSTA-----TNPFGSPTTAFGAQTGT 275 FGST S+ + Q T SN +S+A T P + FGA G Sbjct: 884 FGSTLTTSTSAPATTSQPTLTFSNTVTPTFNIPFSSSAKPALPTYPGANSQPTFGATDGA 943 Query: 276 TSP-----FGAT----SSTAGAFGQPSAPA-FGATSTPAFGAAPA 380 T P FG++ +S A A APA FG+ + PAFG A Sbjct: 944 TKPALAPSFGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLKA 988 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA-- 314 G ++++ T+++ GFG T+ A+ + T+ + +P TSS+A A Sbjct: 785 GTATSTVASGTAASASKPVFGFGVTTAASTASSTMTSTSQSVLFGGAPPVTTSSSAPALA 844 Query: 315 ----FGQPSAPAFGATST 356 FG+P APA A T Sbjct: 845 SIFQFGKPLAPAASAAGT 862
>NUPL_HUMAN (P52594) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)| (Rev-interacting protein) (Rev/Rex activation domain-binding protein) Length = 562 Score = 45.8 bits (107), Expect = 2e-05 Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 22/137 (16%) Frame = +3 Query: 39 AAVDPILXXXXXXXXXXXXXXXXXXXMFGS--------TNPFGQSSASAFGQT-SSNPFG 191 A +D + +FG+ T P S + FG T S+NPF Sbjct: 378 AELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPASSSVPAPFGATPSTNPFV 437 Query: 192 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 335 A +G +++TNPF G+ FG + GT +P+ +S +G+F QP+ P Sbjct: 438 AAAG-PSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPYSLPTSFSGSFQQPAFP 496 Query: 336 AFGA-TSTPAFGAAPAG 383 A A AF P G Sbjct: 497 AQAAFPQQTAFSQQPNG 513 Score = 32.0 bits (71), Expect = 0.37 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNP-FGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGA 293 FG+ P+ S ++F + P F AQ+ F Q T+ + P G+ AFG +PFG Sbjct: 474 FGTPAPY--SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQ 531 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 + A G +S P AP G Sbjct: 532 VA------------AAGVSSNPFMTGAPTG 549 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 7/46 (15%) Frame = +3 Query: 120 FGSTNP----FGQSSASAFGQTSSNPF--GAQSG-FGQTSTATNPF 236 FG T P FGQ +A+ SSNPF GA +G F S++TNPF Sbjct: 519 FGQTKPVVTPFGQVAAAG---VSSNPFMTGAPTGQFPTGSSSTNPF 561
>NUPL_BOVIN (Q2TA45) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 562 Score = 45.8 bits (107), Expect = 2e-05 Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 22/137 (16%) Frame = +3 Query: 39 AAVDPILXXXXXXXXXXXXXXXXXXXMFGS--------TNPFGQSSASAFGQT-SSNPFG 191 A +D + +FG+ T P S + FG T S+NPF Sbjct: 378 AELDSVFSSAATSSNAYTSTSNASSNVFGTVPVGASAQTQPASSSVPAPFGATPSTNPFV 437 Query: 192 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 335 A +G +++TNPF G+ FG + GT +P+ +S +G+F QP+ P Sbjct: 438 AAAG-PSVASSTNPFQTNARGATAATFGTASMSMPAGFGTPAPYSLPTSFSGSFQQPAFP 496 Query: 336 AFGA-TSTPAFGAAPAG 383 A A AF P G Sbjct: 497 AQAAFPQQTAFSQQPNG 513 Score = 31.6 bits (70), Expect = 0.48 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 2/90 (2%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNP-FGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGA 293 FG+ P+ S ++F + P F AQ+ F Q T+ + P G+ AFG +PFG Sbjct: 474 FGTPAPY--SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQ 531 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 A G +S P AP G Sbjct: 532 VG------------AAGVSSNPFMTGAPTG 549 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 7/46 (15%) Frame = +3 Query: 120 FGSTNP----FGQSSASAFGQTSSNPF--GAQSG-FGQTSTATNPF 236 FG T P FGQ A+ SSNPF GA +G F S++TNPF Sbjct: 519 FGQTKPVVTPFGQVGAAG---VSSNPFMTGAPTGQFPTGSSSTNPF 561
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 44.3 bits (103), Expect = 7e-05 Identities = 42/105 (40%), Positives = 55/105 (52%), Gaps = 19/105 (18%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQ-TSTATN----------PFGSPTTA--- 254 MFG++ P SSA AFG S A +GFG T+TATN P + +TA Sbjct: 1011 MFGTSTP-APSSAFAFGNQSGTNPAAPAGFGGITNTATNNPPSTGFTFTPSNAGSTAAPM 1069 Query: 255 FGAQTGTTSPFGATSSTAGAF----GQPSAPAFGATSTP-AFGAA 374 FGA T +P G+ ++ + AF G+PS PA ST +FGAA Sbjct: 1070 FGA-GNTPNPSGSINNASQAFAFGSGEPSNPASNPPSTGFSFGAA 1113 Score = 33.1 bits (74), Expect = 0.17 Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 20/105 (19%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFG-----------SPTTAFGAQTG 272 +T P +S+ G T++ PF S F +TN SP +FG +G Sbjct: 847 TTKPQLDTSSKTDGVTANAPFSFASAFNAPKPSTNTADGKDSASNLTTPSPAFSFGNNSG 906 Query: 273 -----TTSPFGATSSTAGAFGQPSAPAF---GATS-TPAFGAAPA 380 +P +S+ +FG + PAF ATS T + G APA Sbjct: 907 VKASSNNNPSTNSSTAPFSFGTSNKPAFSFGSATSKTTSEGTAPA 951 Score = 27.3 bits (59), Expect = 9.1 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 10/91 (10%) Frame = +3 Query: 141 GQSSASAFGQTSS-NPFGAQSGFGQ---------TSTATNPFGSPTTAFGAQTGTTSPFG 290 G ++A FG ++ NP G+ + Q ++ A+NP P+T F T S F Sbjct: 1063 GSTAAPMFGAGNTPNPSGSINNASQAFAFGSGEPSNPASNP---PSTGFSFGAATPSAFN 1119 Query: 291 ATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 A++S + A P+ F S+ + AP G Sbjct: 1120 ASASQSPA---PNGIQFNLGSSNSQTNAPPG 1147
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 44.3 bits (103), Expect = 7e-05 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 FG ++ SAFG ++ S FG +++ FG T F T+S FGAT+ TA + Sbjct: 1009 FGGATHSAFGLKAT-----ASAFGAPASSQPAFGGSTAVFSFGAATSSGFGATTQTASS- 1062 Query: 318 GQPSAPAFGATSTPAF----GAAPAG 383 S+ FG+T+ F AAPAG Sbjct: 1063 -GSSSSVFGSTTPSPFTFGGSAAPAG 1087 Score = 38.9 bits (89), Expect = 0.003 Identities = 41/105 (39%), Positives = 48/105 (45%), Gaps = 21/105 (20%) Frame = +3 Query: 117 MFGSTNP----FGQSSASA----FGQTSSNP----------FGA-QSGFGQTSTATNPF- 236 +FGST P FG S+A A FG + P FGA QSG TST PF Sbjct: 1068 VFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSATTGAFSFGAGQSGSTATST---PFT 1124 Query: 237 -GSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFG 368 G A G TG ++PF S+ S P FG T+TP FG Sbjct: 1125 GGLGQNALGT-TGQSTPFAFNVSST----TESKPVFGGTATPTFG 1164 Score = 36.6 bits (83), Expect = 0.015 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-----FGATSST 305 G ++ +FG +S+ FGA + + ++++ FGS T + G+ +P FG +T Sbjct: 1038 GSTAVFSFGAATSSGFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVAT 1097 Query: 306 AGAFGQPSAPAFG-------ATSTPAFG 368 G+ A +FG ATSTP G Sbjct: 1098 PGSSATTGAFSFGAGQSGSTATSTPFTG 1125 Score = 35.8 bits (81), Expect = 0.026 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPF--GSPTTAFGAQTGTTSPFGATSS 302 T GQ++ GQ++ F S +T + P G+ T FG T +P TS Sbjct: 1124 TGGLGQNALGTTGQSTPFAFNVSS-----TTESKPVFGGTATPTFGLNT--PAPGVGTSG 1176 Query: 303 TAGAFGQPSAPAFGATSTPAFGAA 374 ++ +FG SAPA G FG+A Sbjct: 1177 SSLSFGASSAPAQGFVGVAPFGSA 1200 Score = 32.3 bits (72), Expect = 0.28 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 12/90 (13%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPF--------GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 F Q++ A T++ P A + S +T+ P FG + ++S Sbjct: 768 FKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSASKPAFGFGINSVSSSSVST 827 Query: 294 TSSTAGAFGQP---SAP-AFGATSTPAFGA 371 T+STA A QP AP A A+ TPA G+ Sbjct: 828 TTSTATAASQPFLFGAPQASAASFTPAMGS 857 Score = 31.6 bits (70), Expect = 0.48 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 14/95 (14%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGA--------------QSGFGQTSTATNPFGSPTTAF 257 FGS+ FG S+A A T+ P A Q FG + + + +AF Sbjct: 968 FGSSFTFGNSAAPA-PATAPTPAPASTIKIVPAHVPTPIQPTFGGATHSAFGLKATASAF 1026 Query: 258 GAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPA 362 GA + FG S+ +FG ++ FGAT+ A Sbjct: 1027 GAPASSQPAFGG-STAVFSFGAATSSGFGATTQTA 1060 Score = 28.1 bits (61), Expect = 5.4 Identities = 32/92 (34%), Positives = 36/92 (39%), Gaps = 14/92 (15%) Frame = +3 Query: 135 PFGQSSASAF----GQTSSNPFGAQSGF--GQTSTATNP-FGSPTTAFG---AQTGTTSP 284 PFG S+ S G FGA G G A P FGS T FG A T+P Sbjct: 928 PFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSSFT-FGNSAAPAPATAP 986 Query: 285 FGATSSTA----GAFGQPSAPAFGATSTPAFG 368 A +ST P P FG + AFG Sbjct: 987 TPAPASTIKIVPAHVPTPIQPTFGGATHSAFG 1018 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 10/59 (16%) Frame = +3 Query: 138 FGQSSASAFGQTSSNP----------FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 284 FG ++ FG + P FGA S Q PFGS +F G+ +P Sbjct: 1155 FGGTATPTFGLNTPAPGVGTSGSSLSFGASSAPAQGFVGVAPFGSAAPSFSIGAGSKTP 1213
>NU153_HUMAN (P49790) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)| (153 kDa nucleoporin) Length = 1475 Score = 43.9 bits (102), Expect = 9e-05 Identities = 44/105 (41%), Positives = 53/105 (50%), Gaps = 24/105 (22%) Frame = +3 Query: 126 STNPFGQSS----ASAFGQTSSNPFGAQSGFGQTS--TATNPFGSPTTAF----GAQTG- 272 +T FGQSS +SAFG T+ + F Q S T+ G+ T F GA + Sbjct: 1224 ATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNN 1283 Query: 273 -TTSPFG----ATSSTAGA---FGQ----PSA-PAFGATSTPAFG 368 TTS FG TSS+AG+ FG PSA PAFGA TP FG Sbjct: 1284 TTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPTFG 1328 Score = 37.4 bits (85), Expect = 0.009 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSSNPFGAQS--------GFGQTSTATNPFGSPTTAFGAQTG 272 +FG T P S++ AFG + FG GFG S++T F + + G Sbjct: 1305 VFG-TGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFG 1363 Query: 273 TTSPFGATSSTAGAFG-QPSAPAFGATSTPAFGAA 374 T S +SS FG QPS AFG+ +TP +A Sbjct: 1364 TVS----SSSQPPVFGQQPSQSAFGSGTTPNSSSA 1394 Score = 35.4 bits (80), Expect = 0.034 Identities = 33/84 (39%), Positives = 41/84 (48%), Gaps = 9/84 (10%) Frame = +3 Query: 138 FGQSSASA----FGQT-SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS---PFGA 293 FG S+S+ FGQ S + FG SG S++ FGS TT F + S FGA Sbjct: 1362 FGTVSSSSQPPVFGQQPSQSAFG--SGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGA 1419 Query: 294 TSSTAGAFGQPS-APAFGATSTPA 362 SST A QPS + F +PA Sbjct: 1420 NSSTPAASAQPSGSGGFPFNQSPA 1443 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFG-QTST-ATNPFGSPTTAFGAQTGTTSPFGATS 299 S + F S + S P A FG QTST A P +F + ++S ATS Sbjct: 1147 SKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATS 1206 Query: 300 STAGAFGQPSAPAFGATSTPAFG 368 + G FG ++ + +T FG Sbjct: 1207 AGGGIFGSSTSSSNPPVATFVFG 1229
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 43.1 bits (100), Expect = 2e-04 Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 13/93 (13%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGAQS---------GFGQTSTATNPFGSPTT--AFGAQTGT 275 T+ +GQSS S++GQ+ + +G QS G+G + ++ + +G ++ +G Q Sbjct: 47 TSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAP 106 Query: 276 TSPFGA--TSSTAGAFGQPSAPAFGATSTPAFG 368 +S G+ +SS + ++GQP + ++ + P++G Sbjct: 107 SSTSGSYGSSSQSSSYGQPQSGSY--SQQPSYG 137 Score = 33.9 bits (76), Expect = 0.098 Identities = 19/78 (24%), Positives = 40/78 (51%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 ++N + Q + ++G + P G G + ++ P+G + + +Q+ TS +G +S + Sbjct: 2 ASNDYTQQATQSYGAYPTQP-----GQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYS 56 Query: 306 AGAFGQPSAPAFGATSTP 359 + +GQ +G STP Sbjct: 57 S--YGQSQNTGYGTQSTP 72
>NUPL2_XENTR (Q5FVW4) Nucleoporin-like 2| Length = 449 Score = 42.0 bits (97), Expect = 4e-04 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQ--TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 296 G+TN S+ AFG TS+ FG SG T+ + + S ++ FGA T +TS FG Sbjct: 261 GATNSLAGSNVPAFGNKPTSAPSFG--SGGAATAASFSFAPSSSSNFGATT-STSGFGNA 317 Query: 297 SSTA---GAFGQPSAPAFGATST 356 S+TA G +APAFG S+ Sbjct: 318 SNTASFQGTANSAAAPAFGVASS 340 Score = 32.0 bits (71), Expect = 0.37 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 6/76 (7%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT----AFGAQTGTTSP--FGATS 299 F SS+S FG T+S SGFG S + G+ + AFG + +T+ FG Sbjct: 297 FAPSSSSNFGATTST-----SGFGNASNTASFQGTANSAAAPAFGVASSSTAATGFGGGF 351 Query: 300 STAGAFGQPSAPAFGA 347 ST GA F A Sbjct: 352 STTGAMNTGVRDLFSA 367
>NU100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore protein| NUP100/NSP100) Length = 959 Score = 42.0 bits (97), Expect = 4e-04 Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 12/99 (12%) Frame = +3 Query: 117 MFGSTN-----PFGQSSASAFGQTS-------SNPFGAQSGFGQTSTATNPFGSPTTAFG 260 +FG+TN Q S FG T NP QSG G + T P + + FG Sbjct: 418 LFGTTNVPTSNTQSQQGNSLFGATKLTNMPFGGNPTANQSGSGNSLFGTKPASTTGSLFG 477 Query: 261 AQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAP 377 T +T+ ST G FG + + T+T FGA P Sbjct: 478 NNTASTT----VPSTNGLFGNNANNSTSTTNTGLFGAKP 512 Score = 36.6 bits (83), Expect = 0.015 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 13/89 (14%) Frame = +3 Query: 126 STN-PFG----QSSASAFGQTSSNPFGAQSGFG-QTSTATNPFGSPTTAFGA--QTGTTS 281 STN PFG + + FG ++N G S FG Q+++ T FG+ ++FG ++ Sbjct: 128 STNSPFGFNKPNTGGTLFGSQNNNSAGTSSLFGGQSTSTTGTFGNTGSSFGTGLNGNGSN 187 Query: 282 PFGA-----TSSTAGAFGQPSAPAFGATS 353 FGA +++T FG + AFG + Sbjct: 188 IFGAGNNSQSNTTGSLFGNQQSSAFGTNN 216 Score = 36.2 bits (82), Expect = 0.020 Identities = 39/122 (31%), Positives = 52/122 (42%), Gaps = 39/122 (31%) Frame = +3 Query: 117 MFGSTNP--------FGQSSASAFGQTSSNP---FG------------AQSGFGQTSTAT 227 MFG+ P FG +++S GQ S P FG AQSGFG ++A Sbjct: 1 MFGNNRPMFGGSNLSFGSNTSSFGGQQSQQPNSLFGNSNNNNNSTSNNAQSGFGGFTSAA 60 Query: 228 NP-----FGSPTT----AFGAQTGTT--SPFGATSSTAGA-----FGQPSAPAFGATSTP 359 FG+ T AFG G T SPFG+ +S+ + G S +FG + Sbjct: 61 GSNSNSLFGNNNTQNNGAFGQSMGATQNSPFGSLNSSNASNGNTFGGSSSMGSFGGNTNN 120 Query: 360 AF 365 AF Sbjct: 121 AF 122 Score = 35.4 bits (80), Expect = 0.034 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQ----TGTTSPFGATS-ST 305 G SS +FG ++N F S + N + T FG+Q GT+S FG S ST Sbjct: 107 GSSSMGSFGGNTNNAFNNNSNSTNSPFGFNKPNTGGTLFGSQNNNSAGTSSLFGGQSTST 166 Query: 306 AGAFGQPSAPAFG 344 G FG + +FG Sbjct: 167 TGTFGN-TGSSFG 178 Score = 32.7 bits (73), Expect = 0.22 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 12/77 (15%) Frame = +3 Query: 126 STNP-FGQSSASAFGQTSSNPFGAQSG-----------FGQTSTATNPFGSPTTAFGAQT 269 STN FG ++ ++ T++ FGA+ FG +++ ++ G FG T Sbjct: 487 STNGLFGNNANNSTSTTNTGLFGAKPDSQSKPALGGGLFGNSNSNSSTIGQNKPVFGGTT 546 Query: 270 GTTSPFGATSSTAGAFG 320 T FGAT + + A G Sbjct: 547 QNTGLFGATGTNSSAVG 563 Score = 32.7 bits (73), Expect = 0.22 Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGS-PTTAFGAQTGTTSPFGAT 296 FG+T G S + SN FGA + Q++T + FG+ ++AFG S FG Sbjct: 170 FGNT---GSSFGTGLNGNGSNIFGAGNN-SQSNTTGSLFGNQQSSAFGTNNQQGSLFGQQ 225 Query: 297 S-STAGAFGQPSAPAFGATSTPAFGAAPAG 383 S +T AFG + G +S FG+ P G Sbjct: 226 SQNTNNAFGNQN--QLGGSS---FGSKPVG 250 Score = 32.3 bits (72), Expect = 0.28 Identities = 26/70 (37%), Positives = 33/70 (47%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 FG+ N G SS FG S P G+ S FGQ++ N G+ T G + S Sbjct: 233 FGNQNQLGGSS---FG---SKPVGSGSLFGQSN---NTLGNTTNNRNGLFGQMNSSNQGS 283 Query: 300 STAGAFGQPS 329 S +G FGQ S Sbjct: 284 SNSGLFGQNS 293 Score = 30.8 bits (68), Expect = 0.83 Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 12/100 (12%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQ----TSSNPFGAQSG------FGQTSTATNPFGSP--TTAFG 260 +FG N Q S FG T+ + FG S FG T+ T+ S + FG Sbjct: 380 LFGQNNNQQQQSTGLFGAKPAGTTGSLFGGNSSTQPNSLFGTTNVPTSNTQSQQGNSLFG 439 Query: 261 AQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 A T PFG G P+A G+ ++ FG PA Sbjct: 440 ATKLTNMPFG---------GNPTANQSGSGNS-LFGTKPA 469 Score = 27.3 bits (59), Expect = 9.1 Identities = 32/115 (27%), Positives = 43/115 (37%), Gaps = 26/115 (22%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSS----NPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 284 +FG N S+ FGQ ++ N S FG+ +T +N Q + Sbjct: 288 LFGQ-NSMNSSTQGVFGQNNNQMQINGNNNNSLFGKANTFSNSASGGLFGQNNQQQGSGL 346 Query: 285 FGATSSTAGAFG--------QPSA--------PAFGAT------STPAFGAAPAG 383 FG S T+G+ G QP+ FG ST FGA PAG Sbjct: 347 FGQNSQTSGSSGLFGQNNQKQPNTFTQSNTGIGLFGQNNNQQQQSTGLFGAKPAG 401
>NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore protein| NUP116/NSP116) Length = 1113 Score = 41.6 bits (96), Expect = 5e-04 Identities = 32/88 (36%), Positives = 39/88 (44%), Gaps = 9/88 (10%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQS-GFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA----- 308 +S FG SN G G Q + NP + FG++ T S FG T+STA Sbjct: 569 ASGGLFGSKPSNTVGGGLFGNNQVANQNNPASTSGGLFGSKPATGSLFGGTNSTAPNASS 628 Query: 309 -GAFGQPSAPAFGAT--STPAFGAAPAG 383 G FG +A AT ST FG P G Sbjct: 629 GGIFGSNNASNTAATTNSTGLFGNKPVG 656 Score = 41.6 bits (96), Expect = 5e-04 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 6/86 (6%) Frame = +3 Query: 120 FGSTN-----PFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 284 FG+ N FGQ + AF Q + G+ FGQ++ N AFG Q GT + Sbjct: 297 FGANNVSNGGAFGQVNRGAFPQQQTQQ-GSGGIFGQSNANANG-----GAFGQQQGTGAL 350 Query: 285 FGATSSTAGAFGQPS-APAFGATSTP 359 FGA ++ G FGQ + + AFG + P Sbjct: 351 FGAKPASGGLFGQSAGSKAFGMNTNP 376 Score = 35.0 bits (79), Expect = 0.044 Identities = 32/75 (42%), Positives = 38/75 (50%), Gaps = 9/75 (12%) Frame = +3 Query: 126 STNPFGQSSASAFG--QTSSNPFGAQSGFG---QTSTATNP-FGSPTTAFGAQTGTTSPF 287 +T PFG S+ S FG Q P S FG QT+T P FG+ FG QT + SPF Sbjct: 13 TTQPFG-STGSTFGGQQQQQQPVANTSAFGLSQQTNTTQAPAFGN----FGNQT-SNSPF 66 Query: 288 GATSSTAG---AFGQ 323 G + ST FGQ Sbjct: 67 GMSGSTTANGTPFGQ 81 Score = 31.6 bits (70), Expect = 0.48 Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 10/71 (14%) Frame = +3 Query: 186 FGAQSGFGQTSTATNPFGSPTTAFGAQ------TGTTSPFGATSSTAGAFGQPSAPAFG- 344 FG G ++T T PFGS + FG Q TS FG + T APAFG Sbjct: 2 FGVSRGAFPSAT-TQPFGSTGSTFGGQQQQQQPVANTSAFGLSQQT----NTTQAPAFGN 56 Query: 345 ---ATSTPAFG 368 TS FG Sbjct: 57 FGNQTSNSPFG 67 Score = 30.8 bits (68), Expect = 0.83 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Frame = +3 Query: 147 SSASAFGQTSSNPFGA-QSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQ 323 +S + G T +NP G +GFG + + T Q T FG + + G FG Sbjct: 169 TSQNGTGTTFNNPQGTTNTGFGIMGNNNSTTSATTGGLFGQKPATGMFGTGTGSGGGFGS 228 Query: 324 PSAPAFGAT-STPAFGAA 374 GAT ST FG++ Sbjct: 229 ------GATNSTGLFGSS 240 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQ--SGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAG 311 FG ++++A +S FG+ S T+ +T FG+ GA T FG ++++ Sbjct: 616 FGGTNSTAPNASSGGIFGSNNASNTAATTNSTGLFGNKPVGAGASTSAGGLFGNNNNSSL 675 Query: 312 AFGQPSAPAFGATST 356 S FG+ +T Sbjct: 676 NNSNGSTGLFGSNNT 690 Score = 30.0 bits (66), Expect = 1.4 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 6/94 (6%) Frame = +3 Query: 117 MFGSTN-----PFGQSSASAFGQTSSNPFGAQ-SGFGQTSTATNPFGSPTTAFGAQTGTT 278 +FG TN PFGQ+ Q +++ FGA+ +GFG TS F + TT Q+ Sbjct: 498 LFGQTNQNNNQPFGQNGLQQ-PQQNNSLFGAKPTGFGNTSL----FSNSTT---NQSNGI 549 Query: 279 SPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 S + G F PA G FG+ P+ Sbjct: 550 SGNNLQQQSGGLFQNKQQPASGG----LFGSKPS 579 Score = 29.6 bits (65), Expect = 1.8 Identities = 31/90 (34%), Positives = 37/90 (41%), Gaps = 7/90 (7%) Frame = +3 Query: 123 GSTNPFGQ---SSASAFGQTSSNPFGAQSGFGQTSTATNP--FGSPTTAFGAQTGTTSPF 287 GS FG +S FG SS S FG AT+ FG+ T T T F Sbjct: 221 GSGGGFGSGATNSTGLFG--SSTNLSGNSAFGANKPATSGGLFGNTTNNPTNGTNNTGLF 278 Query: 288 GATSS--TAGAFGQPSAPAFGATSTPAFGA 371 G +S G FGQ +FGA + GA Sbjct: 279 GQQNSNTNGGLFGQ-QQNSFGANNVSNGGA 307
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 40.8 bits (94), Expect = 8e-04 Identities = 33/89 (37%), Positives = 39/89 (43%), Gaps = 10/89 (11%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNP----------FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 281 NPFG SS SAF +SS FG S FGQ ST S + AF + Sbjct: 5 NPFGGSSPSAFAVSSSTTGTYQTKSPFRFGQPSLFGQNSTP-----SKSLAFSQVPSFAT 59 Query: 282 PFGATSSTAGAFGQPSAPAFGATSTPAFG 368 P G + S+ S PAFG T T + G Sbjct: 60 PSGGSHSS-------SLPAFGLTQTSSVG 81
>NUP57_YEAST (P48837) Nucleoporin NUP57 (Nuclear pore protein NUP57)| Length = 541 Score = 40.4 bits (93), Expect = 0.001 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 10/97 (10%) Frame = +3 Query: 123 GSTNPFGQSSASA----FGQTSSNPFG--AQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 284 GS N FG A + FGQ ++N + SGFG + N + T FGA T + Sbjct: 6 GSNNGFGNKPAGSTGFSFGQNNNNTNTQPSASGFGFGGSQPNSGTATTGGFGANQATNT- 64 Query: 285 FGA---TSSTAGAFG-QPSAPAFGATSTPAFGAAPAG 383 FG+ +S+ G FG +P+ + G++ST A G G Sbjct: 65 FGSNQQSSTGGGLFGNKPALGSLGSSSTTASGTTATG 101 Score = 33.5 bits (75), Expect = 0.13 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 120 FGSTNP-FGQSSASAFGQT-SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 FG + P G ++ FG ++N FG+ Q+ST FG+ + +T+ G Sbjct: 41 FGGSQPNSGTATTGGFGANQATNTFGSNQ---QSSTGGGLFGNKPALGSLGSSSTTASGT 97 Query: 294 TSSTAGAFGQPSA-PAFGATSTPAFGAAP 377 T++ G FGQ +A P FG P Sbjct: 98 TATGTGLFGQQTAQPQQSTIGGGLFGNKP 126
>NUPL2_BRARE (Q6P0U9) Nucleoporin-like 2| Length = 414 Score = 40.0 bits (92), Expect = 0.001 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 7/73 (9%) Frame = +3 Query: 120 FGSTNPF-------GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTT 278 FGS + F GQ S G SS+ FG+ SGFG +S + FGS A + G+T Sbjct: 306 FGSASGFSFKTATAGQGSGFGSGFGSSSGFGSSSGFGSSSGFGSAFGSAAPAQSSSFGST 365 Query: 279 SPFGATSSTAGAF 317 T S G F Sbjct: 366 GGAADTQSGHGLF 378 Score = 40.0 bits (92), Expect = 0.001 Identities = 39/95 (41%), Positives = 47/95 (49%), Gaps = 8/95 (8%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTS-SNP----FGAQSGFGQTSTATNPFGSPTTAFGA-QTGTTS 281 FGS P S+ S FG TS S+P GA G G S++T F T FGA T S Sbjct: 207 FGSPGPGFGSATSGFGNTSLSSPPAGFGGAGFGSGPQSSSTFSFAQSKTDFGASNTQQAS 266 Query: 282 PFGATSSTAGAFGQPSAPAFG--ATSTPAFGAAPA 380 FG++ AF QPS+ FG A S +F A A Sbjct: 267 GFGSS-----AFAQPSS-GFGNPAPSAASFSFAAA 295 Score = 37.7 bits (86), Expect = 0.007 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA--QTGTTSPFGATSSTAGAFG 320 +SA FG A SGFG TS ++ P G FG+ Q+ +T F + + GA Sbjct: 202 ASAPGFGSPGPGFGSATSGFGNTSLSSPPAGFGGAGFGSGPQSSSTFSFAQSKTDFGASN 261 Query: 321 QPSAPAFGATS 353 A FG+++ Sbjct: 262 TQQASGFGSSA 272 Score = 35.0 bits (79), Expect = 0.044 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Frame = +3 Query: 120 FGSTNPFGQSSASAFG-QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 296 FGS G S+S F S FGA + + ++ F P++ FG + + F + Sbjct: 238 FGS----GPQSSSTFSFAQSKTDFGASNTQQASGFGSSAFAQPSSGFGNPAPSAASF--S 291 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 + A + +PSA FG+ S +F A AG Sbjct: 292 FAAADSESKPSAGGFGSASGFSFKTATAG 320 Score = 34.3 bits (77), Expect = 0.075 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 10/95 (10%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 287 FG+ P S + A + S P FG+ SGF TAT GS FG+ G++S F Sbjct: 280 FGNPAPSAASFSFAAADSESKPSAGGFGSASGFS-FKTATAGQGS---GFGSGFGSSSGF 335 Query: 288 GATS---STAG---AFGQPSAPAFGATSTPAFGAA 374 G++S S++G AFG +APA ++ GAA Sbjct: 336 GSSSGFGSSSGFGSAFGS-AAPAQSSSFGSTGGAA 369 Score = 30.8 bits (68), Expect = 0.83 Identities = 22/67 (32%), Positives = 32/67 (47%) Frame = +3 Query: 174 SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATS 353 SS+P + GFG FGS T+ FG + ++ P G + G+ Q S+ A S Sbjct: 197 SSSPPASAPGFGSPGPG---FGSATSGFGNTSLSSPPAGFGGAGFGSGPQSSSTFSFAQS 253 Query: 354 TPAFGAA 374 FGA+ Sbjct: 254 KTDFGAS 260
>NUPL_MOUSE (Q8K2K6) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 561 Score = 39.7 bits (91), Expect = 0.002 Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 22/137 (16%) Frame = +3 Query: 39 AAVDPILXXXXXXXXXXXXXXXXXXXMFGSTNPFGQSSASA--------FGQT-SSNPFG 191 A +D + +FG T P G S+ + FG T S+NPF Sbjct: 378 AELDSVFSSAATSSNAYTPTSNASSSVFG-TVPVGASAQTQPASSGPAPFGATPSTNPFV 436 Query: 192 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 335 A +G +++TNPF G+ FG + GT + + +S +G+F QP+ P Sbjct: 437 AATG-PSAASSTNPFQTNARGATAATFGTASMSMPAGFGTPAQYSLPTSFSGSFQQPAFP 495 Query: 336 AFGA-TSTPAFGAAPAG 383 A A AF P G Sbjct: 496 AQAAFPQQTAFSQQPNG 512 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 2/89 (2%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNP-FGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGAT 296 G P S ++F + P F AQ+ F Q T+ + P G+ FG +PFG Sbjct: 472 GFGTPAQYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFATFGQTKPVVTPFGQV 531 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 + A G +S P AP G Sbjct: 532 A------------AAGVSSNPFMTGAPTG 548
>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)| Length = 512 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 6/85 (7%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-----GTTSPFG 290 S P+GQ S +GQ++ SG+GQ S+ + +G ++ Q+ G+ +G Sbjct: 29 SNQPYGQQSYGGYGQSTDT-----SGYGQ-SSYSGSYGQTQNSYSTQSAPQGYGSAGGYG 82 Query: 291 ATSSTAGAFGQPSA-PAFGATSTPA 362 ++ S+ ++GQ S+ P +G P+ Sbjct: 83 SSQSSQSSYGQQSSYPGYGQQPAPS 107 Score = 38.1 bits (87), Expect = 0.005 Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 14/89 (15%) Frame = +3 Query: 129 TNPFGQSSAS-AFGQTSSN--------PFGAQSGFGQTSTATNPFGSPTTAFG-----AQ 266 T+ +GQSS S ++GQT ++ +G+ G+G + ++ + +G ++ G A Sbjct: 47 TSGYGQSSYSGSYGQTQNSYSTQSAPQGYGSAGGYGSSQSSQSSYGQQSSYPGYGQQPAP 106 Query: 267 TGTTSPFGATSSTAGAFGQPSAPAFGATS 353 + T+ +G++S ++G +GQP +G S Sbjct: 107 SSTSGSYGSSSQSSG-YGQPQGGGYGQQS 134 Score = 35.0 bits (79), Expect = 0.044 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Frame = +3 Query: 126 STNPFGQSS-ASAFGQTSSNPFGAQSGFG--QTSTATNPFGSPTTAFGAQTGTTSPFGAT 296 ++ +G SS +S +GQ +G QSG+G Q S +P +G Q+ S G Sbjct: 109 TSGSYGSSSQSSGYGQPQGGGYGQQSGYGGQQQSYGQQQSYNPPQGYGQQSQYNSSGGGG 168 Query: 297 SSTAGAFGQ 323 G++GQ Sbjct: 169 GGGGGSYGQ 177
>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (DNup214) Length = 1711 Score = 39.7 bits (91), Expect = 0.002 Identities = 29/94 (30%), Positives = 36/94 (38%), Gaps = 11/94 (11%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGAQS-----------GFGQTSTATNPFGSPTTAFGAQTGT 275 +NP G AS FG ++ FG+ + G G +S F T A G G Sbjct: 1528 SNPVGSPQASPFGGGGNSIFGSPATAPPASGGSIFGGGSSSGGFGSFTQTTPAQGGFGGG 1587 Query: 276 TSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAP 377 G S FG P AP T+ FGA P Sbjct: 1588 FGQGGGGSVAQTGFGSPQAPQQQTTTPGGFGAKP 1621 Score = 35.8 bits (81), Expect = 0.026 Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 6/83 (7%) Frame = +3 Query: 141 GQSSASAFG---QTSSNPFGAQSGFGQT---STATNPFGSPTTAFGAQTGTTSPFGATSS 302 G SS+ FG QT+ G GFGQ S A FGSP A QT T FGA Sbjct: 1564 GGSSSGGFGSFTQTTPAQGGFGGGFGQGGGGSVAQTGFGSPQ-APQQQTTTPGGFGAKPV 1622 Query: 303 TAGAFGQPSAPAFGATSTPAFGA 371 G +PAFGA+ T GA Sbjct: 1623 FGG------SPAFGASPTFGGGA 1639 Score = 33.5 bits (75), Expect = 0.13 Identities = 35/98 (35%), Positives = 42/98 (42%), Gaps = 9/98 (9%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTA---------TNPFGSPTTAFGAQT 269 +FG N G A A G TS FG Q FGQ+S A +NP GSP Sbjct: 1486 IFGGGNTQGAVGAPAAGSTSI--FG-QKVFGQSSAAAPAAGGNIFSNPVGSP-------- 1534 Query: 270 GTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 SPFG ++ FG P AT+ PA G + G Sbjct: 1535 -QASPFGGGGNS--IFGSP------ATAPPASGGSIFG 1563 Score = 31.2 bits (69), Expect = 0.63 Identities = 30/81 (37%), Positives = 34/81 (41%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 +T P G + FG S FGA FG +T FGSP FG FG S Sbjct: 1611 TTTPGGFGAKPVFG--GSPAFGASPTFGGGAT----FGSP-KGFGG-------FGGASPV 1656 Query: 306 AGAFGQPSAPAFGATSTPAFG 368 A S P FGA + PA G Sbjct: 1657 A------SPPPFGAAAKPAQG 1671 Score = 28.9 bits (63), Expect = 3.1 Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 47/135 (34%) Frame = +3 Query: 117 MFGS-----TNPFGQSSASAFGQTSS-NPFGAQSGFGQTSTATNP--FGSPTT------- 251 +FGS T+ FG ++ + T++ P +G ++ +NP FGSPTT Sbjct: 1387 IFGSIPKAETSVFGGATTAPSNTTAAATPDAPPAGLFASAAISNPSPFGSPTTRAPASGG 1446 Query: 252 ----------AFG--AQTG-----------TTSPFGATS-----STAGAFGQPSAPAFGA 347 FG AQ G ++PFG++S +T GA G P+A + Sbjct: 1447 NIFGQAVKPSVFGQPAQAGDSGGSIFGGGSASTPFGSSSIFGGGNTQGAVGAPAAGSTSI 1506 Query: 348 TSTPAFG----AAPA 380 FG AAPA Sbjct: 1507 FGQKVFGQSSAAAPA 1521
>ICEN_PANAN (Q47879) Ice nucleation protein inaU| Length = 1034 Score = 39.3 bits (90), Expect = 0.002 Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQS----GFGQTSTATNPFGSPTTAFGAQTGTTSPF 287 +GST G S+ G S+ G S G+G T TA GS TA G+TS Sbjct: 436 YGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQK--GSDLTA---GYGSTSTA 490 Query: 288 GATSSTAGAFGQPSAPAFGATSTPAFGA 371 G SS +G +G+T T +G+ Sbjct: 491 GYESSLIAGYGSTQTAGYGSTLTAGYGS 518 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%) Frame = +3 Query: 120 FGSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 287 +GST G S G QT+ N +G+G TSTA GA + + + Sbjct: 500 YGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTA-----------GANSSLIAGY 548 Query: 288 GATSSTAGAFGQPSAPAFGATSTPAFGA 371 G+T + ++ +G+T T G+ Sbjct: 549 GSTQT--ASYNSVLTAGYGSTQTAREGS 574
>NUPL_RAT (Q4KLH5) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 561 Score = 39.3 bits (90), Expect = 0.002 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 22/137 (16%) Frame = +3 Query: 39 AAVDPILXXXXXXXXXXXXXXXXXXXMFGSTNPFG--------QSSASAFGQT-SSNPFG 191 A +D + +FG T P G S + FG T S+NPF Sbjct: 378 AELDSVFSSAATSNNAYTSTSNASSSVFG-TVPVGASPQTQPASSGPAPFGATPSTNPFV 436 Query: 192 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 335 A +G +++TNPF G+ FG + GT + + +S +G+F QP P Sbjct: 437 AATG-PSAASSTNPFQTNARGATAATFGTASMSMPAGFGTPAQYSLPTSFSGSFQQPPFP 495 Query: 336 AFGA-TSTPAFGAAPAG 383 A A AF P G Sbjct: 496 AQAAFPQQTAFSQQPNG 512 Score = 31.2 bits (69), Expect = 0.63 Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 2/89 (2%) Frame = +3 Query: 123 GSTNPFGQSSASAF-GQTSSNPFGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGAT 296 G P S ++F G PF AQ+ F Q T+ + P G+ FG +PFG Sbjct: 472 GFGTPAQYSLPTSFSGSFQQPPFPAQAAFPQQTAFSQQPNGAGFATFGQTKPVVTPFGQV 531 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 + A G +S P AP G Sbjct: 532 A------------AAGVSSNPFMTGAPTG 548 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 7/46 (15%) Frame = +3 Query: 120 FGSTNP----FGQSSASAFGQTSSNPF--GAQSG-FGQTSTATNPF 236 FG T P FGQ +A+ SSNPF GA +G F S++TNPF Sbjct: 518 FGQTKPVVTPFGQVAAAG---VSSNPFMTGAPTGQFPTGSSSTNPF 560
>ICEN_ENTAG (P16239) Ice nucleation protein| Length = 1258 Score = 39.3 bits (90), Expect = 0.002 Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQS----GFGQTSTATNPFGSPTTAFGAQTGTTSPF 287 +GST G S+ G S+ G S G+G T TA GS TA G+TS Sbjct: 436 YGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQK--GSDLTA---GYGSTSTA 490 Query: 288 GATSSTAGAFGQPSAPAFGATSTPAFGA 371 G SS +G +G+T T +G+ Sbjct: 491 GYESSLIAGYGSTQTAGYGSTLTAGYGS 518 Score = 30.8 bits (68), Expect = 0.83 Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 31/115 (26%) Frame = +3 Query: 120 FGSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTA--------------------- 224 +GST G S G QT+ N +G+G TSTA Sbjct: 500 YGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSV 559 Query: 225 -TNPFGSPTTA-----FGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 T +GS TA A G+T G+ SS +G ++ ++ T +G+ Sbjct: 560 LTAGYGSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGS 614
>NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)| (153 kDa nucleoporin) Length = 1468 Score = 38.9 bits (89), Expect = 0.003 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 12/93 (12%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPF-GAQSGFGQTSTATNPFGSPTTAFGAQTGTTS-PFGAT- 296 S++ FG S+ S+ Q P G + T++A PF T A T ++ FGAT Sbjct: 1229 SSSAFGNSAESSTSQPLLFPQDGKPATTSSTASAAPPFVFGTGASSNSTVSSGFTFGATT 1288 Query: 297 -SSTAGAF-------GQPSA-PAFGATSTPAFG 368 SS++G+F PSA PAFGA TP FG Sbjct: 1289 TSSSSGSFFVFGTGHSAPSASPAFGANQTPTFG 1321 Score = 33.1 bits (74), Expect = 0.17 Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 11/86 (12%) Frame = +3 Query: 138 FGQSSASA----FGQTSSNPFGAQSGFGQ-TSTATN--PFGSPTTAFGAQTGTTS---PF 287 FG S+S+ FGQ S QS FG T+ A++ FGS TT F S F Sbjct: 1356 FGTVSSSSQPPVFGQQPS-----QSAFGSGTANASSVFQFGSSTTNFNFTNNNPSGVFTF 1410 Query: 288 GATSSTAGAFGQPS-APAFGATSTPA 362 GA+ ST A QPS + F + +PA Sbjct: 1411 GASPSTPAAAAQPSGSGGFSFSQSPA 1436 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/81 (28%), Positives = 37/81 (45%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 +T FG + + Q ++ P + +S++T S + FG+ T ++SP Sbjct: 1162 ATFAFGNQTNTTTDQGAAKPAFSFLNSSSSSSSTPATSSSASIFGSSTSSSSP----PVA 1217 Query: 306 AGAFGQPSAPAFGATSTPAFG 368 A FGQ S P S+ AFG Sbjct: 1218 AFVFGQASNP----VSSSAFG 1234
>ICEA_PANAN (P20469) Ice nucleation protein inaA| Length = 1322 Score = 38.9 bits (89), Expect = 0.003 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 15/99 (15%) Frame = +3 Query: 120 FGSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTATNP------FGSPTTA----- 254 +GST G+ S G QT+ +G+G T TA + +GS TA Sbjct: 420 YGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAQKGSD 479 Query: 255 FGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 A G+TS G SS +G +G+T T +G+ Sbjct: 480 LTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGS 518 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%) Frame = +3 Query: 120 FGSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 287 +GST G S G QT+ N +G+G TSTA GA + + + Sbjct: 500 YGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTA-----------GANSSLIAGY 548 Query: 288 GATSSTAGAFGQPSAPAFGATSTPAFGA 371 G+T + ++ +G+T T G+ Sbjct: 549 GSTQT--ASYNSVLTAGYGSTQTAREGS 574
>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline| helicase 1) Length = 763 Score = 38.9 bits (89), Expect = 0.003 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 6/87 (6%) Frame = +3 Query: 141 GQSSASAFG--QTSSNPFGAQ----SGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 G + S FG T + FG SGFG +T + FG +T G +S FG +++ Sbjct: 47 GNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGGSTA 106 Query: 303 TAGAFGQPSAPAFGATSTPAFGAAPAG 383 T+G + AFG + FG + G Sbjct: 107 TSGFGSGEKSSAFGGSG--GFGGSATG 131 Score = 38.5 bits (88), Expect = 0.004 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Frame = +3 Query: 141 GQSSASAFG--QTSSNPFGAQ----SGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 G + S FG +T + FG SGFG ST +P+G ++ FG T TS FG + Sbjct: 57 GNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGGST-ATSGFG-SGE 114 Query: 303 TAGAFGQPSAPAFGATSTPAFGA 371 + AFG + FG ++T FG+ Sbjct: 115 KSSAFG--GSGGFGGSAT-GFGS 134 Score = 37.0 bits (84), Expect = 0.012 Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFG-AQSGFGQTSTATNPFGS--PTTAFGAQTGTTSPFG 290 FG N G S G T +P+G A SGFG STAT+ FGS ++AFG G Sbjct: 74 FGGGNTCG--SGFGGGSTGGSPYGGASSGFGG-STATSGFGSGEKSSAFGGSGGFGGSAT 130 Query: 291 ATSSTAGAFG 320 S G+FG Sbjct: 131 GFGSGGGSFG 140
>ICEV_PSESX (O33479) Ice nucleation protein| Length = 1196 Score = 38.1 bits (87), Expect = 0.005 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQS----GFGQTSTATNPFGSPTTAFGAQTGTTSPF 287 +GST+ G +S+ G S+ G +S G+G T TA + A G+TS Sbjct: 702 YGSTSTAGSNSSLIAGYGSTQTAGFKSIMTAGYGSTQTAQE-----RSDLVAGYGSTSTA 756 Query: 288 GATSSTAGAFGQPSAPAFGATSTPAFGA 371 G +SS +G +G+T T +G+ Sbjct: 757 GYSSSLIAGYGSTQTAGYGSTLTTGYGS 784 Score = 37.0 bits (84), Expect = 0.012 Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 16/100 (16%) Frame = +3 Query: 120 FGSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTA------TNPFGSPTTAFGAQT 269 +GST G S+ G QTS + +G+G T TA T +GS TA GA + Sbjct: 446 YGSTGTAGVDSSLIAGYGSTQTSGSDSALTAGYGSTQTAQEGSNLTAGYGSTGTA-GADS 504 Query: 270 ------GTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 G+T G+ SS +G G+T T +G+ Sbjct: 505 SLIAGYGSTQTSGSESSLTAGYGSTQTAREGSTLTAGYGS 544
>GAMP_PROCL (Q7M3P2) Gastrolith matrix protein (Fragment)| Length = 96 Score = 38.1 bits (87), Expect = 0.005 Identities = 28/78 (35%), Positives = 37/78 (47%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 FGSTN FG + P +GFG A+ FGSP + G+ +S FG+ S Sbjct: 15 FGSTN---------FGSSGFGPSLGSTGFGSAGFASPGFGSP--SLGSAAFGSSSFGSPS 63 Query: 300 STAGAFGQPSAPAFGATS 353 + FG S FG+TS Sbjct: 64 LGSTGFGSSS---FGSTS 78
>ICEN_PSEFL (P09815) Ice nucleation protein| Length = 1210 Score = 38.1 bits (87), Expect = 0.005 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 15/99 (15%) Frame = +3 Query: 120 FGSTNPFGQSSA--SAFGQTSSNPFGAQ--SGFGQTSTA------TNPFGSPTTAFGAQT 269 +GST + S+ + +G TS+ + + +G+G T TA T +GS TA + T Sbjct: 839 YGSTQTAQEESSLTAGYGSTSTAGYASSLIAGYGSTQTAGYDSILTAGYGSTLTALDSST 898 Query: 270 -----GTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 G+T G SS +G +G+T T +G+ Sbjct: 899 LTAGYGSTETAGFGSSLMAGYGSSQIAGYGSTLTAGYGS 937 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 5/86 (5%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTA-----FGAQTGTTSPFGA 293 T +G + + FG + +G+ G ST T +GS A A G+T G Sbjct: 900 TAGYGSTETAGFGSSLMAGYGSSQIAGYGSTLTAGYGSTQMAERDSTLTAGYGSTGTAGQ 959 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGA 371 SS +G + T +G+ Sbjct: 960 DSSLIAGYGSSLTSGMRSYLTAGYGS 985
>RGS6_CAEEL (Q18563) Regulator of G-protein signaling rgs-6| Length = 737 Score = 38.1 bits (87), Expect = 0.005 Identities = 31/86 (36%), Positives = 43/86 (50%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 ST +++A+A G + S + S QT T T+P SPT+ +GTT+ ATSS Sbjct: 638 STKIGDEAAAAAAGASPSTSAPSTSTSVQTKTTTSPTKSPTSTTITTSGTTT--SATSSV 695 Query: 306 AGAFGQPSAPAFGATSTPAFGAAPAG 383 A A P A + STPA + G Sbjct: 696 ATA-PPPVLHAMRSASTPATSSQLTG 720
>NSP1_YEAST (P14907) Nucleoporin NSP1 (Nuclear pore protein NSP1)| (Nucleoskeletal-like protein) (p110) Length = 823 Score = 37.7 bits (86), Expect = 0.007 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 10/86 (11%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGF-----GQTSTATNPFGSPTT---AFGAQTGTTS 281 +TN + A AFG T + FG + S+ T FGS T AFG T++ Sbjct: 24 TTNQNSSTGAGAFG-TGQSTFGFNNSAPNNTNNANSSITPAFGSNNTGNTAFGNSNPTSN 82 Query: 282 PFGATSSTAGAFGQPSA--PAFGATS 353 FG+ +ST FG SA FG++S Sbjct: 83 VFGSNNSTTNTFGSNSAGTSLFGSSS 108 Score = 32.0 bits (71), Expect = 0.37 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 5/93 (5%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGS---PTTAFGAQTG--TTSP 284 FGS N + +AFG +SNP + FG ++ TN FGS T+ FG+ + T S Sbjct: 64 FGSNN----TGNTAFG--NSNP--TSNVFGSNNSTTNTFGSNSAGTSLFGSSSAQQTKSN 115 Query: 285 FGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 A +T G+ + T+ PAFG G Sbjct: 116 GTAGGNTFGSSSLFNNSTNSNTTKPAFGGLNFG 148
>NUPL1_HUMAN (Q9BVL2) Nucleoporin p58/p45 (Nucleoporin-like 1)| Length = 599 Score = 37.4 bits (85), Expect = 0.009 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 6/89 (6%) Frame = +3 Query: 135 PFGQS-----SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGAT 296 PFG +S G ++ FG SGFG ++T + FG TT +G+ S FG++ Sbjct: 491 PFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCSTTGASTFGFGTT--NKPSGSLSAGFGSS 548 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 S++ F P A + A AG Sbjct: 549 STSGFNFSNPGITASAGLTFGVSNPASAG 577 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 6/77 (7%) Frame = +3 Query: 171 TSSNPFGAQSGFGQTSTATNPFGSPTTAFGA------QTGTTSPFGATSSTAGAFGQPSA 332 TS+ G GF + + + PF P T+ A T++P +T T G +A Sbjct: 101 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 160 Query: 333 PAFGATSTPAFGAAPAG 383 A++ + G A AG Sbjct: 161 TTTTASTGLSLGGALAG 177 Score = 27.3 bits (59), Expect = 9.1 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 12/96 (12%) Frame = +3 Query: 126 STNP-----FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGS-PTTAFGAQTGTTSPF 287 S+NP FG +++ T+S P SGFG T FGS P T F GT + Sbjct: 35 SSNPSVGLNFGNLGSTSTPATTSAP---SSGFG-----TGLFGSKPATGF-TLGGTNTGI 85 Query: 288 GATSSTAGAFGQPSAPAFGAT------STPAFGAAP 377 T +T G P+ + T + PA A P Sbjct: 86 ATTITTGLTLGTPATTSAATTGFSLGFNKPAASATP 121
>NU145_YEAST (P49687) Nucleoporin NUP145 precursor (EC 3.4.21.-) (Nuclear pore| protein NUP145) [Contains: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)] Length = 1317 Score = 37.4 bits (85), Expect = 0.009 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 2/87 (2%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNP--FGSPTTAFGAQTGTTSPFGAT 296 GST F S+ A + FG + TST N FG PTT G +T Sbjct: 117 GSTGLFSGSNNIASSTQNGGLFGNSNNNNITSTTQNGGLFGKPTTTPAGAGGLFGNSSST 176 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGAAP 377 +ST G FG + +ST FG P Sbjct: 177 NSTTGLFGSNNT----QSSTGIFGQKP 199
>ICEN_PSESY (P06620) Ice nucleation protein| Length = 1200 Score = 37.0 bits (84), Expect = 0.012 Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 16/100 (16%) Frame = +3 Query: 120 FGSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTA------TNPFGSPTTAFGAQT 269 +GST G S+ G QTS + +G+G T TA T +GS TA GA + Sbjct: 450 YGSTGTAGVDSSLIAGYGSTQTSGSDSALTAGYGSTQTAQEGSNLTAGYGSTGTA-GADS 508 Query: 270 ------GTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 G+T G+ SS +G G+T T +G+ Sbjct: 509 SLIAGYGSTQTSGSESSLTAGYGSTQTAREGSTLTAGYGS 548
>NUPL2_HUMAN (O15504) Nucleoporin-like 2 (NLP-1) (hCG1) (NUP42 homolog)| Length = 423 Score = 37.0 bits (84), Expect = 0.012 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 4/90 (4%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQ---TSTATNPFGSPT-TAFGAQTGTTSPF 287 FGS+ FG +++++ G ++S P GFG+ TS A+ F SP ++FG+ + P Sbjct: 265 FGSSPAFGAAASTSSGISTSAP---AFGFGKPEVTSAASFSFKSPAASSFGSPGFSGLP- 320 Query: 288 GATSSTAGAFGQPSAPAFGATSTPAFGAAP 377 S G P APAFG S+ A +P Sbjct: 321 --ASLATGPVRAPVAPAFGGGSSVAGFGSP 348 Score = 33.9 bits (76), Expect = 0.098 Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 22/103 (21%) Frame = +3 Query: 138 FGQSSASAF--------GQTSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 281 FG S A+ F +S N F SGF S+ + + AFGA T+S Sbjct: 220 FGSSQAATFMSPGFPVNNSSSDNAQNFSFKTNSGFAAASSGSPAGFGSSPAFGAAASTSS 279 Query: 282 PFGATSSTAGAFGQP----------SAPAFGATSTPAFGAAPA 380 +TS+ A FG+P +PA + +P F PA Sbjct: 280 GI-STSAPAFGFGKPEVTSAASFSFKSPAASSFGSPGFSGLPA 321
>ICEK_PSESX (O30611) Ice nucleation protein| Length = 1148 Score = 37.0 bits (84), Expect = 0.012 Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 16/100 (16%) Frame = +3 Query: 120 FGSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTA------TNPFGSPTTAFGAQT 269 +GST G S+ G QTS + +G+G T TA T +GS TA GA + Sbjct: 398 YGSTGTAGVDSSLIAGYGSTQTSGSDSALTAGYGSTQTAQEGSNLTAGYGSTGTA-GADS 456 Query: 270 ------GTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 G+T G+ SS +G G+T T +G+ Sbjct: 457 SLIAGYGSTQTSGSESSLTAGYGSTQTAREGSTLTAGYGS 496
>PUM2_MOUSE (Q80U58) Pumilio homolog 2| Length = 1066 Score = 36.6 bits (83), Expect = 0.015 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 16/97 (16%) Frame = +3 Query: 120 FGSTNPFGQS-SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 296 +GS++ S S+S F P A GFG S+ GS + FG+ G+++ AT Sbjct: 524 YGSSSLTNSSQSSSLFSHGPGQPGSASLGFGSGSSLGAAIGSALSGFGSSVGSSASSSAT 583 Query: 297 ---------------SSTAGAFGQPSAPAFGATSTPA 362 SS+ GQP + G +S+P+ Sbjct: 584 RRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPS 620
>MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)| Length = 1980 Score = 36.2 bits (82), Expect = 0.020 Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 19/97 (19%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSN----------PFGAQSGFGQTSTATNPFG--SPTTAFGAQTG 272 TNPF SAF +SSN FG S FGQ ST + S ++F A +G Sbjct: 4 TNPFSGQQPSAFSASSSNVGTLPSKPPFRFGQPSLFGQNSTLSGKSSGFSQVSSFPASSG 63 Query: 273 T-------TSPFGATSSTAGAFGQPSAPAFGATSTPA 362 T F TSS G F ATS P+ Sbjct: 64 VSHSSSVQTLGFTQTSSVGPFSGLEHTSTFVATSGPS 100
>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline| helicase 2) Length = 974 Score = 36.2 bits (82), Expect = 0.020 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 3/90 (3%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPT---TAFGAQTGTTSPFGA 293 G+T FG +A G SSN G SGFG + FG+ T FG+ + FG+ Sbjct: 33 GNTGGFGSGNAGGTGFGSSNNGG--SGFGGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGS 90 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 ++ FG +A G S A G G Sbjct: 91 GNAGGTGFGSGNAGGTGFGSGNAGGTGFGG 120 Score = 34.3 bits (77), Expect = 0.075 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGA----QSGFGQTSTATNPFGSPTTA---FGAQTGTT 278 FGS NP G S FG ++ FG+ +GFG ++ + FG FG Sbjct: 17 FGS-NPSGFGGGSGFGSGNTGGFGSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGNAGG 75 Query: 279 SPFGATSSTAGAFGQPSAPAFGATSTPA----FGAAPAG 383 + FG+ ++ FG +A G S A FG+ AG Sbjct: 76 TGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAG 114 Score = 32.0 bits (71), Expect = 0.37 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 5/93 (5%) Frame = +3 Query: 120 FGSTNP----FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFG-SPTTAFGAQTGTTSP 284 FGS N FG +A G S G +GFG FG + + G +G T+ Sbjct: 148 FGSGNAGGTGFGSGNAGGTGFGSGKAGG--TGFGSGKAGGTGFGGNSNSGSGFGSGLTNG 205 Query: 285 FGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 FG+ ++ FG + FG ++ G G Sbjct: 206 FGSGNNHESGFGGGKSGGFGGGNSGGSGFGSGG 238 Score = 29.6 bits (65), Expect = 1.8 Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 7/95 (7%) Frame = +3 Query: 120 FGSTNP----FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPT---TAFGAQTGTT 278 FGS N FG +A G N G +GFG + GS T FG+ Sbjct: 98 FGSGNAGGTGFGSGNAGGTGFGGGNAGG--TGFGSGNAGGTGLGSGNAGGTGFGSGNAGG 155 Query: 279 SPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 + FG+ ++ FG A G S A G G Sbjct: 156 TGFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGG 190
>GUN1_USTMA (P54424) Endoglucanase 1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase 1) (Cellulase 1) (EG 1) Length = 393 Score = 35.8 bits (81), Expect = 0.026 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTA-FGAQTGTTSPFGATS 299 GS + G + AS G + G G+GQ S + S A GA +G+ S G+T+ Sbjct: 283 GSGDASGGADASGAGGAAEGSQGQPEGYGQPSGGNDQGSSNGDATTGAGSGSGSDSGSTA 342 Query: 300 STAGAFGQPSAPAFGATSTPAFGAAPAG 383 + +G+ G P++ + G+ P G + G Sbjct: 343 NGSGS-GAPTSGSDGSAVAPPSGGSNPG 369
>NUPL1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like 1)| Length = 585 Score = 35.8 bits (81), Expect = 0.026 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%) Frame = +3 Query: 135 PFGQS-----SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGAT 296 PFG +S G ++ FG SGFG +T + FG TT +G+ S FG++ Sbjct: 477 PFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCGTTGASTFGFGTT--DKPSGSLSAGFGSS 534 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 S++ F P A + A AG Sbjct: 535 STSGFNFSNPGITASAGLTFGVSNPASAG 563 Score = 35.8 bits (81), Expect = 0.026 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP---TTAFG---AQTGTTSP 284 G+ G +SA TS++ G GF + + + PF P TTA G + T++P Sbjct: 71 GTGFTLGGTSAGTTATTSASTTGFSLGFSKPAASATPFALPVTSTTASGLTLSSALTSAP 130 Query: 285 FGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 +T T G A A++ + G A AG Sbjct: 131 AASTGFTLNNLGATPATTTAASTGLSLGGALAG 163 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +3 Query: 249 TAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFG 368 T F +GT G+T+ G G S +FGA+STP+ G Sbjct: 3 TGFSFGSGT---LGSTTVAPGGTGTGSGFSFGASSTPSVG 39
>AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) Length = 907 Score = 35.8 bits (81), Expect = 0.026 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 9/88 (10%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP---------FGATS 299 S+A T+ +P A + +TA + TT A T TT+P F +T Sbjct: 513 STAPPVPATAPSPAPAVAAAAAATTAATAAATTTTTTSAATATTAPPALDIFGDLFESTP 572 Query: 300 STAGAFGQPSAPAFGATSTPAFGAAPAG 383 A A +AP+ ST AF + P G Sbjct: 573 EVAAAPKPDAAPSIDLFSTDAFSSPPQG 600
>YAE6_SCHPO (Q09847) Hypothetical protein C23D3.06c in chromosome I| Length = 1325 Score = 35.8 bits (81), Expect = 0.026 Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 5/90 (5%) Frame = +3 Query: 120 FGSTNPF--GQSSASAFGQTSSNP-FGAQSGFGQTSTATNPFGSPTTAFGAQT--GTTSP 284 FG F G S+ ++ G S+ P FG S FGQ FG P+ AFG G S Sbjct: 493 FGQATSFDKGLSTDASSGAKSNTPVFGQPSTFGQAPV----FGQPS-AFGQAPVFGQPSA 547 Query: 285 FGATSSTAGAFGQPSAPAFGATSTPAFGAA 374 FG +S + G FG +P GAA Sbjct: 548 FGQSSFSFGTSNMNQKLDFGTFKSPLSGAA 577
>NUPL1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like 1)| Length = 587 Score = 35.8 bits (81), Expect = 0.026 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%) Frame = +3 Query: 135 PFGQS-----SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGAT 296 PFG +S G ++ FG SGFG +T + FG TT +G+ S FG++ Sbjct: 479 PFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCGTTGASTFGFGTT--DKPSGSLSAGFGSS 536 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 S++ F P A + A AG Sbjct: 537 STSGFNFSNPGITASAGLTFGVSNPASAG 565 Score = 34.7 bits (78), Expect = 0.057 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA------QTGTTSPFGATSS 302 G +SA TS++ G GF + + + PF P T+ A T++P +T Sbjct: 79 GGTSAGTAATTSASTTGFSLGFSKPAASATPFALPVTSTSASGLTLSSALTSTPAASTGF 138 Query: 303 TAGAFGQPSAPAFGATSTPAFGAAPAG 383 T G A A++ + G A AG Sbjct: 139 TLNNLGATPATTTTASTGLSLGGALAG 165 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/76 (27%), Positives = 30/76 (39%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G S +FG +S+ FG ++ P + +A G TG FG+ +T G Sbjct: 23 GAGSGFSFGTVASSTPSVGLNFGSLGSSVTPASTSASAGGFGTGL---FGSKPATGFTLG 79 Query: 321 QPSAPAFGATSTPAFG 368 SA TS G Sbjct: 80 GTSAGTAATTSASTTG 95
>NUP54_HUMAN (Q7Z3B4) Nucleoporin p54 (54 kDa nucleoporin)| Length = 507 Score = 35.4 bits (80), Expect = 0.034 Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 3/77 (3%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATN---PFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 S S ++ P G GFG TST F +PT TGTT FG T + F Sbjct: 9 SGTSGTAAATAAPAGGFGGFGTTSTTAGSAFSFSAPT-----NTGTTGLFGGTQNKGFGF 63 Query: 318 GQPSAPAFGATSTPAFG 368 G FG T+ + G Sbjct: 64 G----TGFGTTTGTSTG 76 Score = 33.9 bits (76), Expect = 0.098 Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 7/68 (10%) Frame = +3 Query: 186 FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPA-------FG 344 FGA SG T+ AT +P FG FG TS+TAG+ SAP FG Sbjct: 5 FGAPSGTSGTAAAT---AAPAGGFGG-------FGTTSTTAGSAFSFSAPTNTGTTGLFG 54 Query: 345 ATSTPAFG 368 T FG Sbjct: 55 GTQNKGFG 62 Score = 32.0 bits (71), Expect = 0.37 Identities = 18/39 (46%), Positives = 22/39 (56%) Frame = +3 Query: 255 FGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 FGA +GT+ AT++ AG FG FG TST A A Sbjct: 5 FGAPSGTSGTAAATAAPAGGFG-----GFGTTSTTAGSA 38 Score = 31.2 bits (69), Expect = 0.63 Identities = 21/67 (31%), Positives = 27/67 (40%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 FG ++ SAF ++ G FG T FG T FG TGT++ G Sbjct: 25 FGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKGFGFG---TGFGTTTGTSTGLGTGL 81 Query: 300 STAGAFG 320 T FG Sbjct: 82 GTGLGFG 88
>NUP49_YEAST (Q02199) Nucleoporin NUP49/NSP49 (Nuclear pore protein NUP49/NSP49)| Length = 472 Score = 35.4 bits (80), Expect = 0.034 Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF----GATSSTA 308 G ++ASA G S P G S FG TST++ P FGA+ TS F G T++ Sbjct: 141 GMNNASA-GLFGSKPAGGTSLFGNTSTSSAP-AQNQGMFGAKPAGTSLFGNNAGNTTTGG 198 Query: 309 GAFGQPSAPAFGATS 353 G FG S P GATS Sbjct: 199 GLFG--SKPT-GATS 210 Score = 33.9 bits (76), Expect = 0.098 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 12/101 (11%) Frame = +3 Query: 117 MFGST-NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 +FG+ N + FG S++ G+ G T+ FG+ T S G Sbjct: 87 LFGNKPNNTANTGGGLFGANSNSNSGSLFGSNNAQTSRGLFGNNNT----NNINNSSSGM 142 Query: 294 TSSTAGAFGQPSAPA---FGATSTPA--------FGAAPAG 383 +++AG FG A FG TST + FGA PAG Sbjct: 143 NNASAGLFGSKPAGGTSLFGNTSTSSAPAQNQGMFGAKPAG 183 Score = 30.0 bits (66), Expect = 1.4 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 8/70 (11%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPF----GSPTTA---FGAQ-TG 272 +FGS P G +S TSS P Q FG T+ F G+ TT FG++ TG Sbjct: 149 LFGS-KPAGGTSLFGNTSTSSAPAQNQGMFGAKPAGTSLFGNNAGNTTTGGGLFGSKPTG 207 Query: 273 TTSPFGATSS 302 TS FG++++ Sbjct: 208 ATSLFGSSNN 217 Score = 30.0 bits (66), Expect = 1.4 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 14/101 (13%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTA---FGAQTGTTSP--F 287 GST G S Q+ +N FG + G P + T FGA + + S F Sbjct: 56 GSTGGLGASFGQQQQQSQTNAFGGSATTGGGLFGNKPNNTANTGGGLFGANSNSNSGSLF 115 Query: 288 GATS--STAGAFG-------QPSAPAFGATSTPAFGAAPAG 383 G+ + ++ G FG S+ S FG+ PAG Sbjct: 116 GSNNAQTSRGLFGNNNTNNINNSSSGMNNASAGLFGSKPAG 156
>NU159_YEAST (P40477) Nucleoporin NUP159 (Nuclear pore protein NUP159)| Length = 1460 Score = 35.4 bits (80), Expect = 0.034 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 6/90 (6%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 G ++ +S SAFG+ S FG S FG +++ P S + AFG + T FG+ +S Sbjct: 537 GKSSVESPASGSAFGKPS---FGTPS-FGSGNSSVEPPASGS-AFGKPSFGTPSFGSGNS 591 Query: 303 TA------GAFGQPSAPAFGATSTPAFGAA 374 +A AFG+PS FG T AFG A Sbjct: 592 SAEPPASGSAFGKPS---FG---TSAFGTA 615 Score = 34.7 bits (78), Expect = 0.057 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 21/93 (22%) Frame = +3 Query: 159 AFGQTSSNPFGAQSGFGQTSTATNPFGS---------PTTAFGAQTGTTSPFGATSS--- 302 AFG + P ++ FG+ S FGS +AFG + T FG+ +S Sbjct: 509 AFGAIAKEPSTSEYAFGKPSFGAPSFGSGKSSVESPASGSAFGKPSFGTPSFGSGNSSVE 568 Query: 303 ---TAGAFGQPS--APAFGATST----PAFGAA 374 + AFG+PS P+FG+ ++ PA G+A Sbjct: 569 PPASGSAFGKPSFGTPSFGSGNSSAEPPASGSA 601 Score = 33.5 bits (75), Expect = 0.13 Identities = 23/73 (31%), Positives = 36/73 (49%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 FG S + G +S+ P + S FG+ S T+ FG TA +T + S FG + + +F Sbjct: 581 FGTPSFGS-GNSSAEPPASGSAFGKPSFGTSAFG---TASSNETNSGSIFGKAAFGSSSF 636 Query: 318 GQPSAPAFGATST 356 + FG+ T Sbjct: 637 APANNELFGSNFT 649 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 9/65 (13%) Frame = +3 Query: 126 STNPFG-QSSASAFGQTSSNPFGAQS---GFGQT-----STATNPFGSPTTAFGAQTGTT 278 S+ PFG + + S +T++ FG+ S GF + S T FG+ + F +Q G Sbjct: 685 SSTPFGTKPNTSTKPKTNAFDFGSSSFGSGFSKALESVGSDTTFKFGTQASPFSSQLGNK 744 Query: 279 SPFGA 293 SPF + Sbjct: 745 SPFSS 749
>VG50_ICHV1 (Q00130) Hypothetical gene 50 protein| Length = 670 Score = 35.0 bits (79), Expect = 0.044 Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 1/88 (1%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS-PFGATS 299 G+T ++A G T + G T T T PT A G T TT+ P GAT Sbjct: 494 GATGTVTTTTAKPTGATGTVTVATAKPTGATGTVTTTTAKPTGANGTVTTTTAKPTGATG 553 Query: 300 STAGAFGQPSAPAFGATSTPAFGAAPAG 383 + +P+ T+T A PAG Sbjct: 554 TVTTTTAKPTGANGTVTTTT---AKPAG 578 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS-PFGATS 299 G+T ++A G + G T T T PT A G T TT+ P GA Sbjct: 522 GATGTVTTTTAKPTGANGTVTTTTAKPTGATGTVTTTTAKPTGANGTVTTTTAKPAGANG 581 Query: 300 STAGAFGQPSAPAFGATSTPAFGAAPAG 383 + +P+ T+T A PAG Sbjct: 582 TVTTTTAKPAGANGTVTTTT---AKPAG 606 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS-PFGATS 299 G+T ++A G T + G T T PT A G T TT+ P GA Sbjct: 508 GATGTVTVATAKPTGATGTVTTTTAKPTGANGTVTTTTAKPTGATGTVTTTTAKPTGANG 567 Query: 300 STAGAFGQPSAPAFGATSTPAFGAAPAG 383 + +P+ T+T A PAG Sbjct: 568 TVTTTTAKPAGANGTVTTTT---AKPAG 592
>TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)| Length = 1387 Score = 35.0 bits (79), Expect = 0.044 Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 10/90 (11%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFG------AQSGFGQTSTATNPFGSP---TTAFGAQTGTTSPFG 290 F ++S FG T S G + FG T + F S +T FG T+ FG Sbjct: 797 FSGGASSGFGGTLSTTAGFSGVLSTSTSFGSAPTTSTVFSSALSTSTGFGGILSTSVCFG 856 Query: 291 ATSSTAGAFGQPSAPAFGATSTP-AFGAAP 377 + S++G+FG G ST FG +P Sbjct: 857 GSPSSSGSFG-------GTLSTSICFGGSP 879 Score = 34.7 bits (78), Expect = 0.057 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Frame = +3 Query: 147 SSASAFG--QTSSNPFGAQSGFGQTSTATNPFGSP--TTAFGAQTGTTSPFGATSSTAGA 314 S++ FG +SS FG G ST+ GSP +T FG T+ FG +SST+ Sbjct: 850 STSVCFGGSPSSSGSFG-----GTLSTSICFGGSPCTSTGFGGTLSTSVSFGGSSSTSAN 904 Query: 315 FGQPSAPAFGATSTPAFGAAPAG 383 FG + + +P+ GA G Sbjct: 905 FGGTLSTSICFDGSPSTGAGFGG 927 Score = 34.3 bits (77), Expect = 0.075 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 10/70 (14%) Frame = +3 Query: 141 GQSSASA-FGQTSSNPF------GAQSGFGQTSTATNPFGS---PTTAFGAQTGTTSPFG 290 G SS SA FG T S +GFG + FGS +T FG T++ FG Sbjct: 897 GSSSTSANFGGTLSTSICFDGSPSTGAGFGGALNTSASFGSVLNTSTGFGGAMSTSADFG 956 Query: 291 ATSSTAGAFG 320 T ST+ FG Sbjct: 957 GTLSTSVCFG 966 Score = 33.9 bits (76), Expect = 0.098 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 7/84 (8%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPF-GSPTTA--FGAQTGTTSPFGATSSTAGAF 317 S++ +FG +SS + FG T + + F GSP+T FG T++ FG+ +T+ F Sbjct: 890 STSVSFGGSSST----SANFGGTLSTSICFDGSPSTGAGFGGALNTSASFGSVLNTSTGF 945 Query: 318 G--QPSAPAFGAT--STPAFGAAP 377 G ++ FG T ++ FG +P Sbjct: 946 GGAMSTSADFGGTLSTSVCFGGSP 969 Score = 33.5 bits (75), Expect = 0.13 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 15/89 (16%) Frame = +3 Query: 120 FGSTNPFGQ--SSASAFGQTSSNPFGAQSGFGQTSTATNPFG-----------SPTTA-- 254 F ++ FG S+A+ FG T SN G FG + + FG +P+T+ Sbjct: 1059 FSTSAGFGGALSTAADFGGTPSNSIG----FGAAPSTSVSFGGAHGTSLCFGGAPSTSLC 1114 Query: 255 FGAQTGTTSPFGATSSTAGAFGQPSAPAF 341 FG+ + T FG ST+ F ++P+F Sbjct: 1115 FGSASNTNLCFGGPPSTSACFSGATSPSF 1143 Score = 32.3 bits (72), Expect = 0.28 Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 28/115 (24%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQS------------GFGQTSTATNPF-GSPTTAFG 260 FGST G S+ + G ++S+ FG++ GFG S + F G P+T+ G Sbjct: 1255 FGST--LGTSAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFTGEPSTSTG 1312 Query: 261 AQTGTTSPFGATS------------STAGAFGQPSAPA---FGATSTPAFGAAPA 380 +G +S G + ST+G G PS A G + FG P+ Sbjct: 1313 FSSGPSSIVGFSGGPSTGVGFCSGPSTSGFSGGPSTGAGFGGGPNTGAGFGGGPS 1367 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = +3 Query: 207 GQTSTATNPFGSPTT--AFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 G ST+ G+P T FG T++ FG STA FG + + G FGAAP+ Sbjct: 1037 GAVSTSACFSGAPITNPGFGGAFSTSAGFGGALSTAADFGGTPSNSIG------FGAAPS 1090 Score = 31.6 bits (70), Expect = 0.48 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%) Frame = +3 Query: 126 STNPFGQSSASAFG----QTSSNPFGAQSGF-GQTSTATNPFGSPTTAFGAQTGTTSPFG 290 ++ F ++ +FG ++S G S F G ST+ G ++ FG TT+ F Sbjct: 757 TSTSFSSEASISFGGMPCTSASFSGGVSSSFSGPLSTSATFSGGASSGFGGTLSTTAGFS 816 Query: 291 ATSSTAGAFGQPSAPAFGATSTPAFGAA 374 ST+ +FG SAP T++ F +A Sbjct: 817 GVLSTSTSFG--SAP----TTSTVFSSA 838 Score = 30.8 bits (68), Expect = 0.83 Identities = 37/108 (34%), Positives = 41/108 (37%), Gaps = 24/108 (22%) Frame = +3 Query: 126 STNPFGQSSASA-FGQTSSNP--FGAQSG----FGQTSTATNPFG---SPTTAFGAQTGT 275 ST G S SA FG T S FG G FG +G S T FG T Sbjct: 942 STGFGGAMSTSADFGGTLSTSVCFGGSPGTSVSFGSALNTNAGYGGAVSTNTDFGGTLST 1001 Query: 276 TSPFGATSSTAGAFG-------------QPSAPAFGATSTPA-FGAAP 377 + FG + ST+ FG SA GA ST A F AP Sbjct: 1002 SVCFGGSPSTSAGFGGALNTNASFGCAVSTSASFSGAVSTSACFSGAP 1049 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 2/77 (2%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF- 317 G +++ FG G G G TS + FG GT + FG+T T+ F Sbjct: 1208 GPGTSTGFGGGLGTSAGFSGGLG-TSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFS 1266 Query: 318 -GQPSAPAFGATSTPAF 365 G ++ FG+ +F Sbjct: 1267 GGLSTSDGFGSRPNASF 1283 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQT-----STATNPFGSPTTAFGAQTGTTSPFGATSS 302 F ++ +F S+ G G G T ST+ + + + +FG T+S F + +S Sbjct: 689 FSDGASISFNGAPSSSGGFSGGPGITFGVAPSTSASFSNTASISFGGTLSTSSSFSSAAS 748 Query: 303 TAGAFGQPSAPAFGATSTPAFGAAP 377 + ++ +F + ++ +FG P Sbjct: 749 ISFGCAHSTSTSFSSEASISFGGMP 773 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +3 Query: 189 GAQSGFGQTSTATNPF-GSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGAT 350 GA + G + A+ F G+P+++ G G FG ST+ +F ++ +FG T Sbjct: 682 GASTRAGFSDGASISFNGAPSSSGGFSGGPGITFGVAPSTSASFSNTASISFGGT 736 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Frame = +3 Query: 147 SSASAFGQ--TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 S++++FG T+S F + TST S + FG ++ FG T ST+ FG Sbjct: 820 STSTSFGSAPTTSTVFSSALS---TSTGFGGILSTSVCFGGSPSSSGSFGGTLSTSICFG 876 Query: 321 QP--SAPAFGAT--STPAFGAA 374 ++ FG T ++ +FG + Sbjct: 877 GSPCTSTGFGGTLSTSVSFGGS 898
>CU36_MANSE (Q8MUC5) Pupal cuticle protein 36 precursor (MsCP36) (MS-PCP36)| Length = 342 Score = 35.0 bits (79), Expect = 0.044 Identities = 32/87 (36%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Frame = +3 Query: 120 FGSTNPFGQSSA-----SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS- 281 FG P G S S FG S GA SGFG + G + FG Q G S Sbjct: 37 FGGAGPKGGGSGFGGAGSGFGGAGSGFGGAGSGFGGGAGGAFGHGGAGSGFGGQAGGYSG 96 Query: 282 PFGATSSTAGAFGQPSAPAFGATSTPA 362 GA + GA GQ S GA S A Sbjct: 97 AGGAGGYSGGASGQYSGRG-GAASADA 122
>EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) (Epidermal growth factor receptor pathway substrate 15-related sequence) (Eps15-rs) Length = 907 Score = 34.7 bits (78), Expect = 0.057 Identities = 27/81 (33%), Positives = 37/81 (45%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 F S++PF SS S+ G S+PFG FG +S ++ + A +Q P G S Sbjct: 703 FESSDPFSSSSISSKG---SDPFGTLDPFGSSSFSS----AEGFADFSQMSKPPPSGPFS 755 Query: 300 STAGAFGQPSAPAFGATSTPA 362 S+ G G P TPA Sbjct: 756 SSLGGTGFSDDPFKSKQDTPA 776
>MSA2_PLAF1 (P50496) Merozoite surface antigen 2 precursor (MSA-2)| Length = 286 Score = 34.7 bits (78), Expect = 0.057 Identities = 22/70 (31%), Positives = 32/70 (45%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 + A A G S + S G S + + A G+ +G+ G+ S +AGA G P Sbjct: 54 AGAGASGSAGSGDGASGSASGSASGSAS---GSAGASGSASGSAGASGSASGSAGAEGSP 110 Query: 327 SAPAFGATST 356 S PA T+T Sbjct: 111 STPATTTTTT 120 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/69 (28%), Positives = 30/69 (43%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 GS + SAS S + G+ G S + GSP+T T TT+ A +S Sbjct: 70 GSASGSASGSASGSAGASGSASGSAGASGSASGSAGAEGSPSTP-ATTTTTTTTNDAEAS 128 Query: 303 TAGAFGQPS 329 T+ + P+ Sbjct: 129 TSTSSENPN 137
>SPT5H_CAEEL (Q21338) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1208 Score = 34.3 bits (77), Expect = 0.075 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 10/95 (10%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFG----AQTGTTSP 284 M+GS P + +G + G ++ T +GS T A+G + T Sbjct: 810 MYGSKTPMYGAQTPMYGSMTPAYDGGRTPAYGEGGRTPAYGSKTPAYGDLDEHSSSRTPA 869 Query: 285 FGATSSTAGAFGQPS---APAFGATS---TPAFGA 371 +G SS A+G PA+G+T TPA+G+ Sbjct: 870 YGNDSSRTPAYGSADGARTPAYGSTEGGRTPAYGS 904 Score = 27.7 bits (60), Expect = 7.0 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 1/87 (1%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 G P S A+G + +G S+ T +GS A G+T G + Sbjct: 843 GGRTPAYGSKTPAYGDLDEHSSSRTPAYGNDSSRTPAYGSADGARTPAYGSTE--GGRTP 900 Query: 303 TAGAFGQPSAPAFGATS-TPAFGAAPA 380 G+ PA+ + TP + + P+ Sbjct: 901 AYGSMDNSRTPAYDDSGRTPGYESMPS 927
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 34.3 bits (77), Expect = 0.075 Identities = 19/77 (24%), Positives = 39/77 (50%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 ST+ S++S+ TS + S TS+++ +T+ + + +TSP ++S+ Sbjct: 211 STSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSS 270 Query: 306 AGAFGQPSAPAFGATST 356 + PS+ + A+ST Sbjct: 271 SSTSTSPSSKSTSASST 287 Score = 34.3 bits (77), Expect = 0.075 Identities = 20/77 (25%), Positives = 39/77 (50%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 ST+P S++S+ TSS+ S TS ++ S T+ + + +TS ++S+ Sbjct: 197 STSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSS 256 Query: 306 AGAFGQPSAPAFGATST 356 + PS+ + ++ST Sbjct: 257 SSTSTSPSSTSTSSSST 273 Score = 33.1 bits (74), Expect = 0.17 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 4/89 (4%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTS---TATNPFGSPTTAFGAQTGTTSPFGAT 296 ST+P S++S+ TSS+ TS T+T+P + T++ T +S + Sbjct: 225 STSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSA 284 Query: 297 SSTA-GAFGQPSAPAFGATSTPAFGAAPA 380 SST+ ++ ++P+ ++S +P+ Sbjct: 285 SSTSTSSYSTSTSPSLTSSSPTLASTSPS 313 Score = 32.3 bits (72), Expect = 0.28 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 7/92 (7%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT----TSPFGA 293 ST+ S++++ TS++P + + +ST+T+P T+A T + TSP Sbjct: 244 STSTSQSSTSTSSSSTSTSP--SSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLT 301 Query: 294 TSSTAGAFGQPSAPAFGAT---STPAFGAAPA 380 +SS A PS+ + +T ST + G++ A Sbjct: 302 SSSPTLASTSPSSTSISSTFTDSTSSLGSSIA 333 Score = 32.0 bits (71), Expect = 0.37 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 4/89 (4%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQT---STATNPFGSPTTAFGAQTGTTSPFGAT 296 ST+P S++ + TSS+ S T ST+T+P + T++ T ++S + Sbjct: 190 STSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQ 249 Query: 297 SSTAGAFGQPS-APAFGATSTPAFGAAPA 380 SST+ + S +P+ +TS+ + +P+ Sbjct: 250 SSTSTSSSSTSTSPSSTSTSSSSTSTSPS 278
>NUPL2_PONPY (Q5RB98) Nucleoporin-like 2| Length = 423 Score = 33.9 bits (76), Expect = 0.098 Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 22/103 (21%) Frame = +3 Query: 138 FGQSSASAF--------GQTSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 281 FG S A+ F +S N F SGF S+ + + AFGA T+S Sbjct: 220 FGSSQAATFVSPGFPVNNSSSDNAQNFSFKTNSGFAAASSGSPAGFRSSPAFGAAASTSS 279 Query: 282 PFGATSSTAGAFGQP----------SAPAFGATSTPAFGAAPA 380 +TS+ A FG+P +PA + +P F PA Sbjct: 280 AI-STSAPAFGFGKPEVTSAASFSFKSPAASSFGSPGFSGLPA 321 Score = 32.0 bits (71), Expect = 0.37 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Frame = +3 Query: 120 FGSTNPFGQSSAS-AFGQTSSNPFGAQSGFG-QTSTATNPFGSPTT-AFGAQTGTTSPFG 290 FG P S+AS +F +++ FG+ G S AT P +P AFG + Sbjct: 288 FGFGKPEVTSAASFSFKSPAASSFGSPGFSGLPASLATGPVRAPVAPAFGGGSSVAGFGS 347 Query: 291 ATSSTAGAFGQPSAPAFGATS 353 S + AF +PS+ FG +S Sbjct: 348 LGSHSHAAFSKPSSDTFGNSS 368
>NUPL2_XENLA (Q5XGN1) Nucleoporin-like 2| Length = 491 Score = 33.9 bits (76), Expect = 0.098 Identities = 22/61 (36%), Positives = 25/61 (40%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 F S+ S FG T+SN SGFG S A G+ A G S S G F Sbjct: 325 FAPSTISGFGSTASN-----SGFGAASNAAGFQGAANIAAAPAFGVASSTAPASGFGGGF 379 Query: 318 G 320 G Sbjct: 380 G 380
>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 522 Score = 33.9 bits (76), Expect = 0.098 Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF---GATSSTAGAF 317 ++ S FG SSN A S +S T P G FG T + +P G S T G+ Sbjct: 109 ANPSGFGLGSSNLTNAISSTVTSSQGTAPTGF---VFGPSTTSVAPATTSGGFSFTGGST 165 Query: 318 GQPSAPAFGATSTPAFGAAPA 380 QPS G+ A APA Sbjct: 166 AQPSGFNIGSAGNSAQPTAPA 186
>FBSH_HUMAN (Q9HAH7) Probable fibrosin-1 long transcript protein| Length = 372 Score = 33.9 bits (76), Expect = 0.098 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPF----GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA- 293 ++P +A+ ++NPF GA F ST +PFG PT+ + FG Sbjct: 47 SHPASLFTATGAVHAAANPFTAAPGAHGPFLSPSTHIDPFGRPTSFASLAALSNGAFGGL 106 Query: 294 ---TSSTAGAFGQPSAPAFGATSTPAFGAAP 377 T ++ F Q +P + PAF + P Sbjct: 107 GSPTFNSGAVFAQKESPG----APPAFASPP 133 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = +3 Query: 165 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP-SAPAF 341 GQ S+P + G A NP F A G PF + S+ FG+P S + Sbjct: 43 GQELSHPASLFTATGAVHAAANP-------FTAAPGAHGPFLSPSTHIDPFGRPTSFASL 95 Query: 342 GATSTPAFG 368 A S AFG Sbjct: 96 AALSNGAFG 104
>PUM2_HUMAN (Q8TB72) Pumilio homolog 2 (Pumilio-2)| Length = 1066 Score = 33.9 bits (76), Expect = 0.098 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 16/97 (16%) Frame = +3 Query: 120 FGSTNPFGQS-SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 296 +GS++ S S+S F P GFG ++ GS + FG+ G+++ AT Sbjct: 524 YGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSAT 583 Query: 297 ---------------SSTAGAFGQPSAPAFGATSTPA 362 SS+ GQP + G +S+P+ Sbjct: 584 RRESLSTSSDLYKRSSSSLAPIGQPFYNSLGFSSSPS 620
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 33.5 bits (75), Expect = 0.13 Identities = 23/68 (33%), Positives = 27/68 (39%) Frame = +3 Query: 174 SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATS 353 + +PFGA ST T+ G PT TSPFG + S P T Sbjct: 204 AGSPFGAAPSAPSHSTTTS--GPPTAPT-----PTSPFGTAPMVLSSSSTSSGPPTAPTP 256 Query: 354 TPAFGAAP 377 T FG AP Sbjct: 257 TSPFGTAP 264 Score = 32.7 bits (73), Expect = 0.22 Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 11/80 (13%) Frame = +3 Query: 171 TSSNPFG-AQSGFGQTSTATNP--FGSPTTAFGA--------QTGTTSPFGATSSTAGAF 317 T ++PFG A +ST++ P +PT+ FG GT SP S+ A Sbjct: 229 TPTSPFGTAPMVLSSSSTSSGPPTAPTPTSPFGTAPMPPGPPPPGTVSPPLPPSAPAVGV 288 Query: 318 GQPSAPAFGATSTPAFGAAP 377 G PS PA G A AP Sbjct: 289 GGPSVPAAGMPPAAAAATAP 308 Score = 32.3 bits (72), Expect = 0.28 Identities = 36/103 (34%), Positives = 43/103 (41%), Gaps = 20/103 (19%) Frame = +3 Query: 132 NPFGQS-SASAFGQTSSNPFGAQSGFGQTSTATNPFG-------SPTTAFGAQTG--TTS 281 +PFG + SA + T+S P A T T+PFG S +T+ G T TS Sbjct: 206 SPFGAAPSAPSHSTTTSGPPTAP-------TPTSPFGTAPMVLSSSSTSSGPPTAPTPTS 258 Query: 282 PFGAT--------SSTAGAFGQPSAPA--FGATSTPAFGAAPA 380 PFG T PSAPA G S PA G PA Sbjct: 259 PFGTAPMPPGPPPPGTVSPPLPPSAPAVGVGGPSVPAAGMPPA 301 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +3 Query: 249 TAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAP 377 T+ A + SPFGA S S P T T FG AP Sbjct: 196 TSMTANSPAGSPFGAAPSAPSHSTTTSGPPTAPTPTSPFGTAP 238
>NUP54_RAT (P70582) Nucleoporin p54 (54 kDa nucleoporin)| Length = 510 Score = 33.5 bits (75), Expect = 0.13 Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 7/68 (10%) Frame = +3 Query: 186 FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPA-------FG 344 FGA SG TSTAT +P FG FG T++TAG+ SAP G Sbjct: 5 FGAPSGTSGTSTAT---AAPAGGFGG-------FGTTTTTAGSAFSFSAPTNTGSTGLLG 54 Query: 345 ATSTPAFG 368 T FG Sbjct: 55 GTQNKGFG 62 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +3 Query: 255 FGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 FGA +GT+ AT++ AG FG FG T+T A A Sbjct: 5 FGAPSGTSGTSTATAAPAGGFG-----GFGTTTTTAGSA 38 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/80 (27%), Positives = 27/80 (33%), Gaps = 22/80 (27%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNP---FGSPT-------------------TAFG 260 S S ++ P G GFG T+T F +PT T FG Sbjct: 9 SGTSGTSTATAAPAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKGFGFGTGFG 68 Query: 261 AQTGTTSPFGATSSTAGAFG 320 TGT + G T FG Sbjct: 69 TSTGTGTGLGTGLGTGLGFG 88
>NUP54_MOUSE (Q8BTS4) Nucleoporin p54 (54 kDa nucleoporin)| Length = 510 Score = 33.5 bits (75), Expect = 0.13 Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 7/68 (10%) Frame = +3 Query: 186 FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPA-------FG 344 FGA SG TSTAT +P FG FG T++TAG+ SAP G Sbjct: 5 FGAPSGTSGTSTAT---AAPAGGFGG-------FGTTTTTAGSAFSFSAPTNTGSTGLLG 54 Query: 345 ATSTPAFG 368 T FG Sbjct: 55 GTQNKGFG 62 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +3 Query: 255 FGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 FGA +GT+ AT++ AG FG FG T+T A A Sbjct: 5 FGAPSGTSGTSTATAAPAGGFG-----GFGTTTTTAGSA 38 Score = 27.3 bits (59), Expect = 9.1 Identities = 22/80 (27%), Positives = 27/80 (33%), Gaps = 22/80 (27%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNP---FGSPT-------------------TAFG 260 S S ++ P G GFG T+T F +PT T FG Sbjct: 9 SGTSGTSTATAAPAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKGFGFGTGFG 68 Query: 261 AQTGTTSPFGATSSTAGAFG 320 TGT + G T FG Sbjct: 69 TTTGTGTGLGTGLGTGLGFG 88
>CU36A_MANSE (Q8T634) Pupal cuticle protein 36a precursor (CP36a)| Length = 280 Score = 33.5 bits (75), Expect = 0.13 Identities = 32/87 (36%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Frame = +3 Query: 120 FGSTNPFGQSSA-----SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS- 281 FG P G S S FG S GA SGFG + G + FG Q G S Sbjct: 37 FGGAGPKGGGSGFGGAGSGFGGAGSGFGGAGSGFGGGAGGGFGHGGAGSGFGGQAGGYSG 96 Query: 282 PFGATSSTAGAFGQPSAPAFGATSTPA 362 GA GA GQ S GA S A Sbjct: 97 AGGAGGYIGGASGQYSGRG-GAASADA 122
>PICA_DROME (Q9VI75) Phosphatidylinositol-binding clathrin assembly protein LAP| (Like-AP180) Length = 468 Score = 33.5 bits (75), Expect = 0.13 Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 16/95 (16%) Frame = +3 Query: 144 QSSASAFGQTS-SNPFGAQSGF---------GQTSTATNPF----GSPTT--AFGAQTGT 275 QSS+SAFG + S+ F +G + A N + SPT+ A GA Sbjct: 312 QSSSSAFGTAAASSKFDTTNGIDEQLKAQVLAEEEAAMNQYKSKVSSPTSSGAAGASAAL 371 Query: 276 TSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 +PF +S A GQP FGA S AA A Sbjct: 372 ANPF-LSSPPAAQAGQPIVDLFGAASAQPAAAAAA 405
>AMO1_SCHPO (O74315) Nucleoporin-like protein amo1 (Aberrent microtubule| protein 1) Length = 475 Score = 33.5 bits (75), Expect = 0.13 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = +3 Query: 138 FGQSSASAF-GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 314 FG + SAF Q +++PF +Q+ + T +NP + ++FG+ S FG+ +S A Sbjct: 207 FGAPTTSAFTSQLNASPF-SQNTSSNSFTGSNPVQNNPSSFGS-----SSFGSATSGPSA 260 Query: 315 FGQPSAP 335 FG S P Sbjct: 261 FGGISQP 267 Score = 32.3 bits (72), Expect = 0.28 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Frame = +3 Query: 171 TSSNPFGAQSG----FGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG----QP 326 T ++PF + S F A + FG+PTT+ SPF +S+ G Q Sbjct: 182 TQNSPFNSFSNNNNSFNNNQQANDIFGAPTTSAFTSQLNASPFSQNTSSNSFTGSNPVQN 241 Query: 327 SAPAFGATSTPAFGAAPAG 383 + +FG++S FG+A +G Sbjct: 242 NPSSFGSSS---FGSATSG 257
>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72) Length = 650 Score = 33.5 bits (75), Expect = 0.13 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%) Frame = +3 Query: 144 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT---------TSPFGAT 296 + SAS ++ ++ G +G G +GSP +AFGAQ G + +G + Sbjct: 518 RDSASYRDRSETDRAGYANGSG--------YGSPNSAFGAQAGQYTYGQGTYGAAAYGTS 569 Query: 297 SSTAGAFGQPSAPAFGATSTPAFG 368 S TA +G A +GA+ST + G Sbjct: 570 SYTAQEYG---AGTYGASSTTSTG 590
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 33.5 bits (75), Expect = 0.13 Identities = 25/87 (28%), Positives = 33/87 (37%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 GS + A +NP + G T T P P+TA G +T G +++ Sbjct: 112 GSAPGVSSAPPPAVSAPPANPPTTGAPPGPGPTPTPPPAVPSTAPGPPPPSTPSSGVSTT 171 Query: 303 TAGAFGQPSAPAFGATSTPAFGAAPAG 383 G P PA GA P G P G Sbjct: 172 PPQTGGPPPPPAGGAGPGPKPGPGPGG 198
>NKX61_RAT (O35762) Homeobox protein Nkx-6.1| Length = 365 Score = 33.1 bits (74), Expect = 0.17 Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 27/112 (24%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGAQSGFG----------------QTSTATNPFG------- 239 T P SS+S+ + S P GA + G Q +A P G Sbjct: 45 TGPPSSSSSSSSSSSPSPPLGAHNPGGLKPPAAGGLSSLGSPPQQLSAATPHGINDILSR 104 Query: 240 -SPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAA---PAG 383 S A GA + SP G++SS++ + SA A A + A AA PAG Sbjct: 105 PSMPVASGAALPSASPSGSSSSSSSSASATSASAAAAAAAAAAAAAASSPAG 156
>KCNAE_DROME (Q02280) Potassium voltage-gated channel protein eag (Ether-a-go-go| protein) Length = 1174 Score = 33.1 bits (74), Expect = 0.17 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = +3 Query: 150 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 314 +A+ TSS G G G +T T P PTTA G+ +GT + AT++ G+ Sbjct: 1111 TAAQLPSTSSGGAGGGGGSGSGATPTTP--PPTTAGGSGSGTPTSTTATTTPTGS 1163
>IASPP_MOUSE (Q5I1X5) RelA-associated inhibitor (Inhibitor of ASPP protein)| (Protein iASPP) (PPP1R13B-like protein) (NFkB-interacting protein 1) Length = 824 Score = 33.1 bits (74), Expect = 0.17 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 5/88 (5%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT----AFGAQTGTTS-PF 287 G+ +P G++ + G G + F A +P GSP AF + G + P Sbjct: 148 GAGSPHGRAPSPRPGIGPVRQPGPSTPFDYLGRAGSPRGSPLAEGPQAFFPERGPSPRPP 207 Query: 288 GATSSTAGAFGQPSAPAFGATSTPAFGA 371 A TAG FG P A G+ TP A Sbjct: 208 AAAYDTAGTFGSPLLGAGGSAFTPPLRA 235
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 33.1 bits (74), Expect = 0.17 Identities = 21/83 (25%), Positives = 33/83 (39%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 S+ P +++ SS P + + TS ++ P S + +T+P TSS Sbjct: 469 SSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSV 528 Query: 306 AGAFGQPSAPAFGATSTPAFGAA 374 S P A ST A A+ Sbjct: 529 LPTSSVSSTPLSSANSTTATSAS 551 Score = 33.1 bits (74), Expect = 0.17 Identities = 21/83 (25%), Positives = 33/83 (39%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 S+ P +++ SS P + + TS ++ P S + +T+P TSS Sbjct: 355 SSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSV 414 Query: 306 AGAFGQPSAPAFGATSTPAFGAA 374 S P A ST A A+ Sbjct: 415 LPTSSVSSTPLSSANSTTATSAS 437
>RESIL_DROME (Q9V7U0) Pro-resilin precursor| Length = 620 Score = 33.1 bits (74), Expect = 0.17 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%) Frame = +3 Query: 162 FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPS---- 329 FG S+ +GA GQ ++ +G+P + G +S +GA S G G+PS Sbjct: 262 FGGRPSDSYGAP---GQNQKPSDSYGAPGSGNGNGGRPSSSYGAPGSGPG--GRPSDSYG 316 Query: 330 APAFGATSTPAFGAAPAG 383 PA G+ + A G+ P G Sbjct: 317 PPASGSGAGGAGGSGPGG 334
>HRBL_MOUSE (Q80WC7) HIV-1 Rev-binding protein-like protein (Rev/Rex activation| domain binding protein-related) (RAB-R) Length = 479 Score = 33.1 bits (74), Expect = 0.17 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +3 Query: 144 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 287 Q + S+FG ++ G + +TNPF + ++AF ++ TT+PF Sbjct: 431 QQNGSSFGDLGTSKLGQRPLSQPAGISTNPFMTGSSAFASKPPTTNPF 478
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 33.1 bits (74), Expect = 0.17 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = +3 Query: 171 TSSNPFGAQSGFGQTSTATN-PFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGA 347 ++SNP A SG T+T + P G+ T GAQ + + ++ G S+ G Sbjct: 266 STSNPDAAASGGASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSSTSGG 325 Query: 348 TSTPA 362 TPA Sbjct: 326 AGTPA 330 Score = 31.2 bits (69), Expect = 0.63 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 10/92 (10%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 ST+ G SS S+ + P + G T + +NP + + TG+ +P GA + Sbjct: 238 STSTNGNSSTSS---SVEQPTSGLTPAGGTVSTSNPDAAASGGASTATGSKAPSGAVTIR 294 Query: 306 AGAFG----------QPSAPAFGATSTPAFGA 371 GA G Q SAP+ +S+ + GA Sbjct: 295 VGAQGNNVQSGSSNAQSSAPSGTISSSTSGGA 326
>CAP9_ARATH (P94017) Putative clathrin assembly protein At1g14910| Length = 692 Score = 32.7 bits (73), Expect = 0.22 Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 9/82 (10%) Frame = +3 Query: 159 AFGQTSSNPFGAQSGF------GQTSTATNPFG--SPTTAFGAQTGTTSPFGATSSTAGA 314 A+G +SNPF Q F S NPFG PT Q + ++ G Sbjct: 472 AYGVPASNPFEVQDLFAFSDSVSPPSAVNNPFGLYEPTYHQQEQQPQLQVAPSPANPFGD 531 Query: 315 FGQ-PSAPAFGATSTPAFGAAP 377 FG+ P P ST +FGA P Sbjct: 532 FGEFPIVPVSEPQSTTSFGAFP 553
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 32.3 bits (72), Expect = 0.28 Identities = 24/77 (31%), Positives = 32/77 (41%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 +SA TS++ SG G T+ +P + +T T TTS G T S Sbjct: 101 TSAPTTSTTSASTASTTSGPG---TSLSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTT 157 Query: 327 SAPAFGATSTPAFGAAP 377 SAP TS P +P Sbjct: 158 SAPTTSTTSGPGTTPSP 174 Score = 32.0 bits (71), Expect = 0.37 Identities = 25/81 (30%), Positives = 35/81 (43%) Frame = +3 Query: 135 PFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 314 P +++++ T+S P S TST + P S T+A A T TS G + S Sbjct: 72 PTTSTTSASTASTTSGPGTTPSPVPTTSTTSAPTTSTTSASTAST--TSGPGTSLSPVPT 129 Query: 315 FGQPSAPAFGATSTPAFGAAP 377 SAP TS P +P Sbjct: 130 TSTTSAPTTSTTSGPGTTPSP 150 Score = 29.3 bits (64), Expect = 2.4 Identities = 24/73 (32%), Positives = 31/73 (42%) Frame = +3 Query: 135 PFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 314 P ++++ T+S P S TST + P S T+A A T TS G T S Sbjct: 40 PTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSASTAST--TSGPGTTPSPVPT 97 Query: 315 FGQPSAPAFGATS 353 SAP TS Sbjct: 98 TSTTSAPTTSTTS 110
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 32.3 bits (72), Expect = 0.28 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA--QTGTTSPFGATS 299 ST+ ++ S TS+ S TST+++ +PTT A T TTS ++ Sbjct: 204 STSSSTSTTVSVTSSTSTTTSTTSSTLISTSTSSSSSSTPTTTSSAPISTSTTSSTSTST 263 Query: 300 STAGAFGQPSAPAFGATSTP 359 ST SAP + +TP Sbjct: 264 STTSPTSS-SAPTSSSNTTP 282 Score = 30.8 bits (68), Expect = 0.83 Identities = 24/77 (31%), Positives = 33/77 (42%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 S+ P SSA T+S+ + S TS++ S TT TTSP A SST Sbjct: 240 SSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTTSPSTAPSST 299 Query: 306 AGAFGQPSAPAFGATST 356 + +A +T T Sbjct: 300 TVTYTSTTASPITSTIT 316 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 SS+S TSS P S TST+T+ +++ + T+P T +T P Sbjct: 238 SSSSTPTTTSSAPIST-STTSSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTTSPSTAP 296 Query: 327 SAPAFGATSTPA 362 S+ TST A Sbjct: 297 SSTTVTYTSTTA 308
>RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 32.3 bits (72), Expect = 0.28 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 15/100 (15%) Frame = +3 Query: 126 STNPFG--QSSASAFGQTSSNPFGAQS--GFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 S P+G Q SASA P A S +G ++ +G+ +++GAQ ++ A Sbjct: 301 SLGPYGGAQPSASALSSYGGQPAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRA 360 Query: 294 TSS---------TAGAFGQPSAP--AFGATSTPAFGAAPA 380 +S + G++G +A A A S+ A+GA A Sbjct: 361 AASSYNTQGAANSLGSYGAQAASYGAQSAASSLAYGAQAA 400
>FIBH_BOMMO (P05790) Fibroin heavy chain precursor (Fib-H) (H-fibroin)| Length = 5263 Score = 32.3 bits (72), Expect = 0.28 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 3/86 (3%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPT---TAFGAQTGTTSPFGA 293 GS G + + +G + +GA +G G S A G+ G+ G S GA Sbjct: 470 GSGTGAGSGAGAGYGAGAGAGYGAGAGSGAASGAGAGSGAGAGSGAGAGSGAGAGSGAGA 529 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGA 371 S +G + +GA + +GA Sbjct: 530 GSGAGAGYGAGAGAGYGAGAGAGYGA 555 Score = 32.0 bits (71), Expect = 0.37 Identities = 19/78 (24%), Positives = 38/78 (48%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 +G + + +G + + G+ +G G + A + G+ + A GA +G + GA S + Sbjct: 4950 YGVGAGAGYGAGAGSGAGSGAGAGSGAGAGSGAGAGSGA-GAGSGAGAGSGAGSGAGAGY 5008 Query: 318 GQPSAPAFGATSTPAFGA 371 G + +GA + +GA Sbjct: 5009 GAGAGAGYGAGAGAGYGA 5026 Score = 30.8 bits (68), Expect = 0.83 Identities = 24/85 (28%), Positives = 35/85 (41%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 FG G S + +S + FG SG G S A G+ GA +G + GA + Sbjct: 1826 FGPYVAHGGYSGYEYAWSSESDFGTGSGAGAGSGAGAGSGA-----GAGSGAGAGSGAGA 1880 Query: 300 STAGAFGQPSAPAFGATSTPAFGAA 374 + G + +GA +GAA Sbjct: 1881 GSGAGAGSGAGAGYGAGVGAGYGAA 1905 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/78 (29%), Positives = 36/78 (46%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 + SS S FG S G+ +G G + A + G+ + A GA +G + GA + Sbjct: 1840 YAWSSESDFGTGSGAGAGSGAGAGSGAGAGSGAGAGSGA-GAGSGAGAGSGAGAGYGAGV 1898 Query: 318 GQPSAPAFGATSTPAFGA 371 G A+GA + +GA Sbjct: 1899 GAGYGAAYGAGAGAGYGA 1916 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/77 (27%), Positives = 36/77 (46%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G +AS G S G+ +G G + A + G+ + A GA +G + GA + + G Sbjct: 4787 GSGAASGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGA-GAGSGAGAGSGAGAGSGAGAG 4845 Query: 321 QPSAPAFGATSTPAFGA 371 + +GA + +GA Sbjct: 4846 SGAGAGYGAGAGVGYGA 4862 Score = 29.6 bits (65), Expect = 1.8 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 7/91 (7%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTA-----FGAQTGTTSP 284 FG+ + G S + G + GA +G+G A G A GA +GT S Sbjct: 2319 FGTGSGAGAGSGAGAGAGAGAGSGAGAGYGAGVGAGYGAGYGAGAGAGYGAGAGSGTGSG 2378 Query: 285 FGATSSTAGAFGQPSAPAF--GATSTPAFGA 371 GA S +G + GA S AFGA Sbjct: 2379 AGAGSGAGAGYGAGVGAGYGAGAGSGAAFGA 2409 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPT-TAFGAQTGTTSPFGATS 299 GS G + + G + + GA SG G S A + G+ + GA +G + GA + Sbjct: 2139 GSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGSGSGAGAGSGAGAGSGAGAGSGAGA 2198 Query: 300 STAGAFGQPSAPAFGATSTPAFGA 371 + G + +GA + +GA Sbjct: 2199 GSGAGAGSGAGAGYGAGAGAGYGA 2222 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/83 (26%), Positives = 37/83 (44%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 GS G + S G S G+ +G G + A + G+ + A GA +G + GA + Sbjct: 1919 GSGAASGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGA-GAGSGAGAGSGAGAG 1977 Query: 303 TAGAFGQPSAPAFGATSTPAFGA 371 + G + +GA + +GA Sbjct: 1978 SGAGAGSGAGAGYGAGAGAGYGA 2000 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPT-TAFGAQTGTTSPFGAT 296 +G+ G +S + G + + GA SG G S A G+ + GA +G + GA Sbjct: 409 YGAGAGSGAASGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAG 468 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGA 371 + + G + +GA + +GA Sbjct: 469 AGSGTGAGSGAGAGYGAGAGAGYGA 493 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/77 (25%), Positives = 35/77 (45%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G + S G S G+ +G G + A + G+ + A GA +G + GA + +G Sbjct: 4601 GSGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGA-GAGSGAGAGSGAGAGYGAGYG 4659 Query: 321 QPSAPAFGATSTPAFGA 371 + +GA + +GA Sbjct: 4660 AGAGAGYGAGAGVGYGA 4676 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/87 (24%), Positives = 38/87 (43%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 G+ + G + + G S G+ +G G + A + G+ + A GA +G + GA + Sbjct: 4023 GAASGAGAGAGAGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGA-GAGSGAGAGSGAGAG 4081 Query: 303 TAGAFGQPSAPAFGATSTPAFGAAPAG 383 + G + +GA +GA G Sbjct: 4082 SGAGAGSGAGAGYGAGVGAGYGAGYGG 4108 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTA-FGAQTGTTSPFGATSSTAGA 314 +G + + +G + + G SG G S A +G+ A +GA G+ + FGA + Sbjct: 2359 YGAGAGAGYGAGAGS--GTGSGAGAGSGAGAGYGAGVGAGYGAGAGSGAAFGAGAGAGAG 2416 Query: 315 FGQPSAPAFGATSTPAFGA 371 G + GA S G+ Sbjct: 2417 SGAGAGSGAGAGSGAGAGS 2435 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/77 (28%), Positives = 32/77 (41%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G S + G + + GA SG G S A G+ GA +G S GA + + G Sbjct: 2001 GAGSGAGSGAGAGSGAGAGSGAGAGSGAGAGSGA-----GAGSGAGSGSGAGAGSGAGAG 2055 Query: 321 QPSAPAFGATSTPAFGA 371 + +GA +GA Sbjct: 2056 SGAGAGYGAGVGAGYGA 2072 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/77 (25%), Positives = 35/77 (45%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G + S G S G+ +G G + A + G+ + A GA +G + GA + + G Sbjct: 966 GAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGA-GAGSGAGAGSGAGAGSGAGAG 1024 Query: 321 QPSAPAFGATSTPAFGA 371 + +GA + +GA Sbjct: 1025 SGAGAGYGAGAGAGYGA 1041 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/77 (22%), Positives = 29/77 (37%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G + + G + P+ A G+ A + T GA G+ + G+ + G Sbjct: 1220 GAGAGAGTGSSGFGPYVAHGGYSGYEYAWSSESDFGTGSGAGAGSGAGAGSGAGAGSGAG 1279 Query: 321 QPSAPAFGATSTPAFGA 371 S +GA +GA Sbjct: 1280 AGSGAGYGAGVGAGYGA 1296
>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) Length = 864 Score = 32.3 bits (72), Expect = 0.28 Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFG----AQTGTTSPF 287 F S++PF SS S+ G S+PFG FG GS +A G +Q P Sbjct: 705 FESSDPFSSSSVSSKG---SDPFGTLDPFGS--------GSFNSAEGFADFSQMSKPPPS 753 Query: 288 GATSSTAGAFGQPSAPAFGATSTPA 362 G +S+ G G P TPA Sbjct: 754 GPFTSSLGGAGFSDDPFKSKQDTPA 778
>SSB_COREF (Q8FLP9) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 232 Score = 32.3 bits (72), Expect = 0.28 Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 18/105 (17%) Frame = +3 Query: 123 GSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 290 G FG + FG NP G Q GFGQ T FG Q G FG Sbjct: 125 GGQGGFGGNQGGGFGGQGGNQGGNPGGGQGGFGQN----------TGGFGGQQGNQGGFG 174 Query: 291 --------------ATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 + G FG A + P A PAG Sbjct: 175 GGQGGNPGGNQGQSGNNFNQGGFGGGGNQAAAPDNDPWNSAPPAG 219
>CDSN_MOUSE (Q7TPC1) Corneodesmosin precursor| Length = 561 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG-TTSPFGATSS 302 S + G SS+S + S + +G+ Q+S + GS G+QTG ++S G++SS Sbjct: 82 SFSSHGGSSSSQGSSSGSLIYKPGTGYSQSSYSYGSGGSRPGGSGSQTGSSSSQTGSSSS 141 Query: 303 TAGAFGQPS 329 +G+ G S Sbjct: 142 QSGSSGSQS 150
>NUPL2_MOUSE (Q8CIC2) Nucleoporin-like 2 (NLP-1)| Length = 420 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/69 (31%), Positives = 33/69 (47%) Frame = +3 Query: 174 SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATS 353 S++ FG+ FG +A + S T AFG ATS+ + +F P A +F + Sbjct: 261 STSVFGSHPAFGAGPSAGSSISSSTPAFGLGKPE-----ATSAASFSFKSPEASSF---A 312 Query: 354 TPAFGAAPA 380 +P F PA Sbjct: 313 SPGFSGFPA 321 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/63 (30%), Positives = 25/63 (39%) Frame = +3 Query: 192 AQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 A FG S FGSP + +T + ++ G PS S PAFGA Sbjct: 214 AVPAFGFGSKQAGSFGSPGFPVNNSSSSTVQNFSFKTSPGLATPPSGSTSVFGSHPAFGA 273 Query: 372 APA 380 P+ Sbjct: 274 GPS 276
>KRHB4_MOUSE (Q99M73) Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4)| (65 kDa type II keratin) Length = 603 Score = 32.0 bits (71), Expect = 0.37 Identities = 32/93 (34%), Positives = 35/93 (37%), Gaps = 10/93 (10%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTS-------SNPFGAQSGFGQTSTATNPFGSPT-TAFGAQTGT 275 F FG S FG +S S P GFG S FGS F A +G Sbjct: 44 FRGLGGFGSRSVINFGSSSPRIAVGCSRPVRCGVGFGAGSGMA--FGSGDGLGFRASSGV 101 Query: 276 TSPFGATSSTAGAFGQP--SAPAFGATSTPAFG 368 FGA T+ FG P P FG P FG Sbjct: 102 GLGFGAGGCTSYGFGGPGFGGPGFGG---PGFG 131 Score = 27.7 bits (60), Expect = 7.0 Identities = 24/84 (28%), Positives = 27/84 (32%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAG 311 N F SS S S F GFG S SP A G G + + Sbjct: 29 NRFRSSSVSC---RSGPGFRGLGGFGSRSVINFGSSSPRIAVGCSRPVRCGVGFGAGSGM 85 Query: 312 AFGQPSAPAFGATSTPAFGAAPAG 383 AFG F A+S G G Sbjct: 86 AFGSGDGLGFRASSGVGLGFGAGG 109
>HBA1_SCHPO (Q09146) Brefeldin A resistance protein (Caffeine resistance| protein 1) Length = 399 Score = 32.0 bits (71), Expect = 0.37 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G+ ++A S +PF S F S A++PF + +TA S FGA +S+ AF Sbjct: 125 GKKESAAKPAASVSPF---SQFASFSNASSPFSNVSTASSEPKEEKSAFGAFASSKSAFT 181 Query: 321 QPS 329 S Sbjct: 182 MKS 184
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 32.0 bits (71), Expect = 0.37 Identities = 21/76 (27%), Positives = 39/76 (51%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 SSAS SS+P + + +S+A + S + A + + + S + SS+A + P Sbjct: 448 SSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAP 507 Query: 327 SAPAFGATSTPAFGAA 374 S+ A ++S P+ A+ Sbjct: 508 SSSA-SSSSAPSSSAS 522 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 1/84 (1%) Frame = +3 Query: 126 STNPFGQSSASAFGQTS-SNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 +T S +SA G TS S+ G+ + S ++ SP+++ + + ++S ++ S Sbjct: 420 TTTTGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPS 479 Query: 303 TAGAFGQPSAPAFGATSTPAFGAA 374 ++ A PS+ A ++S+P+ A+ Sbjct: 480 SSAASSSPSSSA-SSSSSPSSSAS 502
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 31.6 bits (70), Expect = 0.48 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 5/91 (5%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 + +P SS S+ S P A + + +P G P A A+ T +P ++ Sbjct: 172 AASPASSSSGSSGSSGSPGPSAAPRRW--SPARGDPVGEPGPA--ARPRTPAPPAQPAAV 227 Query: 306 AGAFGQ-----PSAPAFGATSTPAFGAAPAG 383 A A + P++PA G S P G AP+G Sbjct: 228 AAAPARRGPASPASPAAGPVSAPGGGGAPSG 258
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 31.6 bits (70), Expect = 0.48 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = +3 Query: 171 TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG-TTSPFGATSSTAGAFGQPSAPAFGA 347 T+ +P A G + T P G+ + + TTSP G+T+ GA S+ A Sbjct: 136 TAQSPHAAAPGSSTPGSMTPPGGAHSPKSSSPVSPTTSPPGSTTPPGGAHSPKSSSAVSP 195 Query: 348 TSTPAFGAAP 377 ++P AP Sbjct: 196 ATSPPGSMAP 205 Score = 27.7 bits (60), Expect = 7.0 Identities = 24/80 (30%), Positives = 37/80 (46%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 GST P G + + ++SS A S G + + SPTT+ A +TSP +S+ Sbjct: 176 GSTTPPGGAHSP---KSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVSPSSA 232 Query: 303 TAGAFGQPSAPAFGATSTPA 362 + P AP +T P+ Sbjct: 233 PMTSPPAPMAPKSSSTIPPS 252
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)| Length = 662 Score = 31.6 bits (70), Expect = 0.48 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Frame = +3 Query: 156 SAFGQTSSNPFGAQSGFGQ--TSTATNPFGSPTTAFG-AQTGTTSPFGATSSTAGAFGQP 326 +A G+ S+ P A + G+ T+ A T A G A T TT+P + A Sbjct: 29 AAAGEVSAPPTAAVAATGEDATTAAATAAAETTAAAGEAPTTTTAPATTAAGKAPTTAAA 88 Query: 327 SAPAFGATSTP--AFGAAPA 380 +AP A P A G APA Sbjct: 89 TAPTTAAAGAPTTATGKAPA 108
>MUC13_RAT (P97881) Mucin-13 precursor| Length = 547 Score = 31.6 bits (70), Expect = 0.48 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 S+AS T+ P GA S T+T T P GS + GTT P G S+ QP Sbjct: 128 STASQTPGTTQPPGGASS---PTTTVTQPTGSSSQT----PGTTQPPGGASTPTTTVTQP 180 Query: 327 --SAPAFGATSTPAFGAA 374 S+ T+ P GA+ Sbjct: 181 TGSSSQTSGTTQPPGGAS 198 Score = 30.8 bits (68), Expect = 0.83 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 3/58 (5%) Frame = +3 Query: 213 TSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP---SAPAFGATSTPAFGAAP 377 TST T PT+ GTT P G SS QP S+ G T P + P Sbjct: 116 TSTPTTTATQPTSTASQTPGTTQPPGGASSPTTTVTQPTGSSSQTPGTTQPPGGASTP 173 Score = 30.8 bits (68), Expect = 0.83 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 ST ++A+ TS+ G TST T PT GTT G TS+ Sbjct: 33 STTSTPTTTATQPTSTSTQTPGTTQLPSTTSTPTTTATQPTXTSTQTPGTTQLPGTTSTP 92 Query: 306 AGAFGQPSAPAF---GATSTPAFGAAP 377 QP++ +F G T P+ + P Sbjct: 93 TTTATQPTSTSFQTPGTTQLPSSTSTP 119 Score = 29.6 bits (65), Expect = 1.8 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 3/90 (3%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFG---SPTTAFGAQTGTTSPFGA 293 G+T P G +S+ T + P G+ S QT T P G +PTT T P G+ Sbjct: 135 GTTQPPGGASSPT--TTVTQPTGSSS---QTPGTTQPPGGASTPTTTV------TQPTGS 183 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 +S T+G + P GA+S+ ++ G Sbjct: 184 SSQTSGT----TQPPGGASSSTVTSSSSTG 209 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 ST ++A+ TS+ G G TST T PT+ GTT +TS+ Sbjct: 60 STTSTPTTTATQPTXTSTQTPGTTQLPGTTSTPTTTATQPTSTSFQTPGTTQLPSSTSTP 119 Query: 306 AGAFGQPSAPAF---GATSTPAFGAAP 377 QP++ A G T P ++P Sbjct: 120 TTTATQPTSTASQTPGTTQPPGGASSP 146 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 3/60 (5%) Frame = +3 Query: 207 GQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAF---GATSTPAFGAAP 377 G TST T PT+ GTT TS+ QP++ + G T P+ + P Sbjct: 6 GGTSTPTTTATQPTSTSTQTPGTTQLLSTTSTPTTTATQPTSTSTQTPGTTQLPSTTSTP 65
>DESM_MESAU (P02541) Desmin| Length = 468 Score = 31.6 bits (70), Expect = 0.48 Identities = 20/78 (25%), Positives = 33/78 (42%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 FG + + + G S+P ++GFG ++++ T TS AG Sbjct: 17 FGGAPSFSLGSPLSSPVFPRAGFGTKGSSSSV-----------TSRVYQVSRTSGGAGGL 65 Query: 318 GQPSAPAFGATSTPAFGA 371 G A G+T P++GA Sbjct: 66 GSLRASRLGSTRAPSYGA 83
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 31.6 bits (70), Expect = 0.48 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 13/92 (14%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTT-----------SPFGA 293 SS+S+ TSS+ A G +STAT P S +++ G + S A Sbjct: 153 SSSSSSSSTSSSTSSASPTAGASSTATCPASSSSSSGNGSGGKSGSIKQEHTEIHSSSSA 212 Query: 294 TSSTAGAFGQPSAPAFGATSTPAF--GAAPAG 383 S+ A + PA S+PA G PAG Sbjct: 213 ISAAAASTVMSPPPAEATRSSPATPEGGGPAG 244
>FBSH_MOUSE (Q8R089) Probable fibrosin-1 long transcript protein| Length = 378 Score = 31.2 bits (69), Expect = 0.63 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 20/91 (21%) Frame = +3 Query: 165 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS---PFGATSSTA-------GA 314 GQ S+P + G A NPF + A G ++ PFG +S A GA Sbjct: 43 GQELSHPASLFTATGAVHAAANPFTTAPGAHGPFLSPSTHIDPFGRPTSFASLAALSNGA 102 Query: 315 FGQPSAPAFGATST----------PAFGAAP 377 FG +P F +++ PAF + P Sbjct: 103 FGGLGSPTFNSSAVFAQKESPGAPPAFASPP 133
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 31.2 bits (69), Expect = 0.63 Identities = 20/63 (31%), Positives = 31/63 (49%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 G T G ++ + G + SG GQ+ST + GS TTA G+ +G +S G+ Sbjct: 1118 GGTGSGGSATTLSTGDAVRSTTSG-SGSGQSSTGSGAGGSGTTASGSGSGGSSGTGSDGV 1176 Query: 303 TAG 311 +G Sbjct: 1177 NSG 1179 Score = 30.0 bits (66), Expect = 1.4 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 10/91 (10%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFG-----SPTTAFGAQT----- 269 + ST +SS SA ++S+ S TST T P S TT+ G+ T Sbjct: 655 YSSTTIESESSTSAVASSTSSTPSTPSSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQES 714 Query: 270 GTTSPFGATSSTAGAFGQPSAPAFGATSTPA 362 TTS T S+ S + +ST A Sbjct: 715 TTTSEESTTDSSTTTISDTSTTSSSPSSTTA 745 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 +T+P S +SS+ + ST+T+P + TT+ TT+P +T+ Sbjct: 450 TTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTS------TTAPSTSTTGP 503 Query: 306 AGAFGQPSAPAFGATSTPA 362 + + PS+ A + S+ A Sbjct: 504 SSSSSTPSSTASSSVSSTA 522
>SALL1_HUMAN (Q9NSC2) Sal-like protein 1 (Zinc finger protein SALL1) (Spalt-like| transcription factor 1) (HSal1) Length = 1324 Score = 31.2 bits (69), Expect = 0.63 Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 1/82 (1%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGA-QSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 G SAS G P QS G T +N SP A TT + Sbjct: 298 GLAQSLASQSASISGVKQLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVTTPSSEKVA 357 Query: 300 STAGAFGQPSAPAFGATSTPAF 365 S+AGA S PA ++S+PAF Sbjct: 358 SSAGA-SHVSNPAVSSSSSPAF 378
>K2CB_BOVIN (P04262) Keratin, type II cytoskeletal 68 kDa, component IB| (Fragment) Length = 166 Score = 31.2 bits (69), Expect = 0.63 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Frame = +3 Query: 120 FGSTNPFGQ----SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 287 FG + FG S +S FG S + FG SGF + ++ FG ++ FG+ +G S Sbjct: 85 FGGGSGFGGGSGISGSSGFGGGSGSGFGGGSGF----SGSSGFGGGSSGFGSGSGGRSGV 140 Query: 288 GATSSTAGA 314 ++G+ Sbjct: 141 SGGGLSSGS 149
>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) Length = 650 Score = 31.2 bits (69), Expect = 0.63 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%) Frame = +3 Query: 165 GQTSSNPFGAQSGFGQTSTATNP-FGSPTTAFGAQTG----TTSPFGATS-STAGAFGQP 326 G+ S + +S + S A +GSP +AFGAQ G +GA + T+G Q Sbjct: 516 GRRDSTSYRDRSETDRASYANGSGYGSPNSAFGAQAGQYTYAQGTYGAAAYGTSGYTAQE 575 Query: 327 -SAPAFGATSTPAFG 368 +A +GA+ST + G Sbjct: 576 YAAGTYGASSTASAG 590
>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis| thaliana envelope membrane integrase) (Ath4) (ALBINO3-like protein 1) Length = 1013 Score = 31.2 bits (69), Expect = 0.63 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = +3 Query: 177 SNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATS 353 SN G+ +G TST+ SP G+ T G+ ST G G PS G S Sbjct: 386 SNSGGSGNGTNSTSTSGGGSPSPGGGSGSPPSTGGGSGSPPSTGGGGGSPSKGGGGGKS 444
>RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1840 Score = 31.2 bits (69), Expect = 0.63 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFG---SPTTAFGAQTGTTSPFG 290 + T+P ++ ++G TS + + QS S A +P SP + + + SP Sbjct: 1706 YSPTSPSYSPTSPSYGPTSPS-YNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTS 1764 Query: 291 ATSSTAGAFGQPSAPAFGATSTPAFGAAP 377 + S PS+P + +S + GA+P Sbjct: 1765 PSYSPTSPSYSPSSPTYSPSSPYSSGASP 1793
>PKN2_MYXXA (P54736) Serine/threonine-protein kinase pkn2 (EC 2.7.11.1)| Length = 830 Score = 30.8 bits (68), Expect = 0.83 Identities = 27/79 (34%), Positives = 34/79 (43%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 S A+ TS G+ SG T T F A A +GT + FG SS+ A G Sbjct: 301 SGATPSSGTSVFGTGSASGSSSGPTGTAAFAGVAPAPQASSGTAA-FGVASSSGSASGAL 359 Query: 327 SAPAFGATSTPAFGAAPAG 383 A A T T +FG +G Sbjct: 360 PA-ASPHTGTASFGLKSSG 377
>SEC9_DEBHA (Q6BKU3) Protein transport protein SEC9| Length = 490 Score = 30.8 bits (68), Expect = 0.83 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSG---FGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 296 +TNP+G S A + GA S G +T TNP+G + A +P+G Sbjct: 100 TTNPYGSRSERANNPYGNGNVGASSRGERAGGRNTQTNPYGGARASGRASGSKPNPYGGV 159 Query: 297 SS 302 + Sbjct: 160 QN 161
>CS66_WHEAT (P46526) Cold shock protein CS66| Length = 469 Score = 30.8 bits (68), Expect = 0.83 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 1/69 (1%) Frame = +3 Query: 165 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAF-GAQTGTTSPFGATSSTAGAFGQPSAPAF 341 G + +G Q G T T T+ G + + G TAG +GQ A Sbjct: 146 GTATGGSYGEQRHTGVTGTGTHDIGEKKSLMENIKEKLPGGHGDNQQTAGTYGQQGHFAT 205 Query: 342 GATSTPAFG 368 G TPA G Sbjct: 206 GTHGTPATG 214
>VTU2_DROME (P13238) Vitelline membrane protein Vm26Ab precursor (Protein TU-4)| (Protein SV23) Length = 168 Score = 30.8 bits (68), Expect = 0.83 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = +3 Query: 192 AQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 A G+G A + A A + +P ++ A A+ P+APA+ A + PA+ A Sbjct: 48 AYGGYGAAPAAPSYSAPAAPAAQAYSAPAAP-AYSAPAAPAYSAPAAPAYSAPAAPAYSA 106 Query: 372 APA 380 A Sbjct: 107 PAA 109 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/74 (28%), Positives = 36/74 (48%) Frame = +3 Query: 150 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPS 329 S +A+G + P A S + A + +P A A + +P ++ A A+ P+ Sbjct: 45 SRAAYGGYGAAP-AAPSYSAPAAPAAQAYSAP--AAPAYSAPAAP-AYSAPAAPAYSAPA 100 Query: 330 APAFGATSTPAFGA 371 APA+ A + PA+ A Sbjct: 101 APAYSAPAAPAYSA 114
>PUM1_MOUSE (Q80U78) Pumilio homolog 1| Length = 1189 Score = 30.8 bits (68), Expect = 0.83 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 15/85 (17%) Frame = +3 Query: 150 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFG---------------AQTGTTSP 284 S+S F Q S+ P GFG +S+ GS FG + TG++ Sbjct: 658 SSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDL 717 Query: 285 FGATSSTAGAFGQPSAPAFGATSTP 359 + TSS+ G + +S+P Sbjct: 718 YKRTSSSLAPIGHSFYSSLSYSSSP 742
>HIRA_MOUSE (Q61666) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1015 Score = 30.4 bits (67), Expect = 1.1 Identities = 25/71 (35%), Positives = 30/71 (42%) Frame = +3 Query: 150 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPS 329 S+S G S+P G Q P S T +FGA T P ATS+ S Sbjct: 485 SSSLAGTMLSSPSGQQ---------LLPLDSSTPSFGASKPCTEPVAATSARPTG-ESVS 534 Query: 330 APAFGATSTPA 362 + ATSTPA Sbjct: 535 KDSMNATSTPA 545
>YI94_SCHPO (Q9UT55) Protein C806.04c| Length = 440 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = -1 Query: 265 CAPKAVVGLPKGLVAVLVWPNPDWAPKG---LLEVCPKA 158 C VVGLP GL + P W G ++E CPKA Sbjct: 402 CKADVVVGLPDGLYEKIAKDLPHWERTGKYAVVEFCPKA 440
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 30.4 bits (67), Expect = 1.1 Identities = 29/110 (26%), Positives = 37/110 (33%), Gaps = 33/110 (30%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTS----TATNPFGSPTT-------------- 251 S +P S F S PFG+ +TS + P G+P T Sbjct: 1339 SGSPDSSGETSGFFDVSGQPFGSSGVSEETSGIPEISGQPSGTPDTTATSGVTELNELSS 1398 Query: 252 --------------AFGAQTGTTSPFGATSSTAGAFGQPSA-PAFGATST 356 G +G TS G TS + GQPS P F T+T Sbjct: 1399 GQPDVSGDGSGILFGSGQSSGITSVSGETSGISDLSGQPSGFPVFSGTAT 1448 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +3 Query: 168 QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAG 311 + +SNP+ Q G + S A G +T TGT+ AT +G Sbjct: 1786 EVNSNPWTFQEGTREGSAAPEVSGESSTTSDIDTGTSGVPSATPMASG 1833
>NG79_SCHPO (Q09793) Putative nucleoporin C22G7.09c| Length = 425 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/70 (28%), Positives = 29/70 (41%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 FG + +FG T + + G ++N FG+ T Q T + G T GAF Sbjct: 2 FGLNKTPSFGSTGTQNQNTGTSAGTGLFSSNTFGNNT-----QANTPASTGFGGVTGGAF 56 Query: 318 GQPSAPAFGA 347 GQ G+ Sbjct: 57 GQTKPQTGGS 66 Score = 29.3 bits (64), Expect = 2.4 Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 8/85 (9%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNP----FG-SPTTAFGAQ---TGTTSPFGA 293 FG + AFGQT G+ G +T+T P FG +P A G TT P Sbjct: 48 FGGVTGGAFGQTKPQTGGSLFGNKPNATSTTPGLNLFGQNPQAAPGGSLFGASTTKP--- 104 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFG 368 + G F Q A A + P G Sbjct: 105 -QAPGGLFNQNQTQAQPAQAAPTGG 128
>MSA2_PLAFF (P19599) Merozoite surface antigen 2 precursor (MSA-2) (Merozoite| 45 kDa surface antigen) (AG513) Length = 264 Score = 30.4 bits (67), Expect = 1.1 Identities = 22/86 (25%), Positives = 40/86 (46%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 G+ P + AS +++++ + + G++ T T P + T A G+Q T S +TS+ Sbjct: 54 GANAPNADTIASGSQRSTNSASTSTTNNGESQTTT-PTAADTIASGSQRSTNS--ASTST 110 Query: 303 TAGAFGQPSAPAFGATSTPAFGAAPA 380 T Q + P T T +P+ Sbjct: 111 TNNGESQTTTPTAADTPTATESISPS 136
>COE4_HUMAN (Q9BQW3) Transcription factor COE4 (Early B-cell factor 4) (EBF-4)| (Olf-1/EBF-like 4) (OE-4) (O/E-4) Length = 644 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/78 (24%), Positives = 32/78 (41%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAG 311 N F A A G + P + G+ ++ ++ +P G + Q+G GA G Sbjct: 531 NAFSSPLAIAVGDATPGP---EPGYARSCSSASPRGFAPSPGSQQSGYGGGLGAG---LG 584 Query: 312 AFGQPSAPAFGATSTPAF 365 +G P G +P+F Sbjct: 585 GYGAPGVAGLGVPGSPSF 602
>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)| (Protein kinase A interference protein) Length = 376 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/79 (22%), Positives = 40/79 (50%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 S+ S ++F +S + + S S++++ F +T+ +++ T+S +TSS+ Sbjct: 86 SSTSIASISFTSFSFSSDSSTSSSSSASSDSSSSSSFSISSTSATSESSTSSTQTSTSSS 145 Query: 306 AGAFGQPSAPAFGATSTPA 362 + PS+ + +T T A Sbjct: 146 SSLSSTPSSSSSPSTITSA 164
>YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 precursor| Length = 1317 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTS---TATNPFGSPTTAFGAQTGTTSPFGAT 296 STN QS++++ G S++ FG S +TS TAT+ S ++ + TS Sbjct: 412 STNE--QSTSTSSGGHSTSTFGTTSETPETSTDFTATSTSSSSDSSTQSSNAQTSTIENG 469 Query: 297 SSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 S+T PS + AT T + G Sbjct: 470 STTTNFTSAPSTSSTPATPTTTYNWPTGG 498 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/69 (33%), Positives = 31/69 (44%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 S++S +TSS+ +QS TST S T TG T+ ST+ + G Sbjct: 369 STSSPMAETSSSSTTSQSSPASTSTVPE---SSTVGSTPTTGLTTLSTNEQSTSTSSGGH 425 Query: 327 SAPAFGATS 353 S FG TS Sbjct: 426 STSTFGTTS 434
>STFQ_ECOLI (P77515) Side tail fiber protein homolog from lambdoid prophage Qin| Length = 320 Score = 30.4 bits (67), Expect = 1.1 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 8/79 (10%) Frame = +3 Query: 153 ASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTA-FGAQTGTTSPFGA-------TSSTA 308 AS S G +S S ++ G+ TT+ F T +T+ GA T+++A Sbjct: 146 ASGRAVLSQEQDGIKSHTHSASASSTDLGTETTSSFDYGTKSTNNTGAHTHSISGTANSA 205 Query: 309 GAFGQPSAPAFGATSTPAF 365 GA S+ AFG T+T F Sbjct: 206 GAHQHKSSGAFGGTNTSIF 224
>MRP_RABIT (P35566) MARCKS-related protein (MARCKS-like protein 1) (Macrophage| myristoylated alanine-rich C kinase substrate) (Mac-MARCKS) (MacMARCKS) Length = 198 Score = 30.4 bits (67), Expect = 1.1 Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 5/86 (5%) Frame = +3 Query: 141 GQSSASA--FGQTSSNPFGAQSGFG---QTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 G SSAS+ + GA S G + A P A GA+ G G T Sbjct: 113 GDSSASSPTEEEQEQGEIGACSEEGTAPEGKAAATPESQEPQAKGAEAGAACKGGDTEEE 172 Query: 306 AGAFGQPSAPAFGATSTPAFGAAPAG 383 AG +PS P S P G PAG Sbjct: 173 AGPPAEPSTP-----SGPESGPTPAG 193
>SGP1_CHRVI (O52057) Sulfur globule protein CV1 precursor| Length = 127 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/66 (28%), Positives = 30/66 (45%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G+ +G+ + +GA G+G P+G +GA G +P+GA A Sbjct: 59 GRGYGRGYGRGNGYGYGAPYGYGAPYGYGAPYG-----YGAPYGYGAPYGAMPYGAMPPQ 113 Query: 321 QPSAPA 338 P+APA Sbjct: 114 MPAAPA 119
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101| Length = 621 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Frame = +3 Query: 165 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT---TSPFGATSSTAGAFGQPSAP 335 G P G S AT SP TA + TGT T P A S T+G PSAP Sbjct: 372 GSPGGMPVGPDGYHQPVSAAT--MASPLTAMSS-TGTPAVTPPSSAVSYTSGHSPSPSAP 428 Query: 336 AFGATS 353 A S Sbjct: 429 AMSPQS 434
>ZN703_HUMAN (Q9H7S9) Zinc finger protein 703| Length = 590 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 G SS S+ +SS+ G ++GF S A PF A + ++SP G+ Sbjct: 171 GSSSVSSTSSSSSSSPGDKAGFRVPSAACPPFPPHGAPVSASSSSSSPGGS 221
>34KD_MYCPA (Q04959) 34 kDa antigenic protein| Length = 298 Score = 30.0 bits (66), Expect = 1.4 Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 8/94 (8%) Frame = +3 Query: 120 FGSTNPFGQSSASAF-----GQTSSNPFGAQ---SGFGQTSTATNPFGSPTTAFGAQTGT 275 +G +GQ + GQ P G Q G+G G+PT FGAQ Sbjct: 174 YGQYGQYGQYGQQPYYGQPGGQPGGQPGGQQHSPQGYGSQYGGYGQGGAPTGGFGAQ--- 230 Query: 276 TSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAP 377 SP +A Q P+ T P+F P Sbjct: 231 PSPQSGPQQSA----QQQGPSTPPTGFPSFSPPP 260
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 30.0 bits (66), Expect = 1.4 Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 10/89 (11%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTS--TATNPFGS-----PTTAFGAQTGTTSP 284 ST P S+ S QTS+ + T+ T+T P S PTT+ + T TTS Sbjct: 228 STTPT-TSTTSTTSQTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTST 286 Query: 285 FG---ATSSTAGAFGQPSAPAFGATSTPA 362 TS+T+ F SA A ST A Sbjct: 287 ISTAPTTSTTSSTFSTSSASASSVISTTA 315 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS- 302 ST P +++S F +S++ S TST +P T+ + TTS T++ Sbjct: 288 STAPTTSTTSSTFSTSSASASSVISTTATTSTTFASLTTPATSTASTDHTTSSVSTTNAF 347 Query: 303 TAGAFGQPSAPAFGATSTPA 362 T A ++ + ++S+P+ Sbjct: 348 TTSATTTTTSDTYISSSSPS 367 Score = 28.5 bits (62), Expect = 4.1 Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPF-GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 ST P S+ S TS+ P S QTST + +PTT+ + T TTS TS+ Sbjct: 213 STTPT-TSTTSTTPTTSTTPTTSTTSTTSQTSTKST---TPTTSSTSTTPTTSTTPTTST 268 Query: 303 TAGAFGQPSAPAFGATST 356 T+ +AP TST Sbjct: 269 TS------TAPTTSTTST 280 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/77 (24%), Positives = 34/77 (44%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 ST P ++++ ++++ S T T + +PTT+ + T TTS T +T Sbjct: 159 STTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTT 218 Query: 306 AGAFGQPSAPAFGATST 356 + P+ TST Sbjct: 219 STTSTTPTTSTTPTTST 235 Score = 27.3 bits (59), Expect = 9.1 Identities = 23/70 (32%), Positives = 32/70 (45%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 S+ TS+ P + + T T+T P S TT+ +QT T S TSST+ Sbjct: 204 STTPTTSTTSTTPTTSTTSTTPT-TSTTPTTS-TTSTTSQTSTKSTTPTTSSTSTTPTTS 261 Query: 327 SAPAFGATST 356 + P TST Sbjct: 262 TTPTTSTTST 271
>CIC_MOUSE (Q924A2) Protein capicua homolog| Length = 1606 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = +3 Query: 225 TNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQ--PSAPAF 341 T P G T++ +QTGT + +G TSS A F PS PAF Sbjct: 1012 TLPLG--TSSACSQTGTVTSYGPTSSVALGFTSLGPSGPAF 1050
>PHP_DROME (P39769) Polyhomeotic-proximal chromatin protein| Length = 1589 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/72 (30%), Positives = 33/72 (45%) Frame = +3 Query: 144 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQ 323 Q S + QTS QS GQ ++ PF ++ A T+S A S +GA Q Sbjct: 938 QQSGATSQQTSQQQQHHQS--GQLQLSSVPFSVSSSTTPAGIATSSALQAALSASGAIFQ 995 Query: 324 PSAPAFGATSTP 359 + P ++S+P Sbjct: 996 TAKPGTCSSSSP 1007 Score = 28.1 bits (61), Expect = 5.4 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 9/84 (10%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 +S+ G + P G T+T P GSP T + T+P +T +T A + Sbjct: 1115 ASSGGGGSIPATPTKETPSKGPTATLV-PIGSPKTPVSGKDTCTTPKSSTPATVSASVEA 1173 Query: 327 SA---------PAFGATSTPAFGA 371 S+ A +STP+ GA Sbjct: 1174 SSSTGEALSNGDASDRSSTPSKGA 1197
>NUPL2_CHICK (Q5ZI22) Nucleoporin-like 2| Length = 413 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 10/94 (10%) Frame = +3 Query: 132 NPFGQSSASA----------FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 281 NP G ++SA G TS SGFG ++ A + +P + T Sbjct: 279 NPVGSGNSSAPSAASFSFKTSGTTSGCGTSGLSGFGSSAAANSSSTAPLPVSATPSAATG 338 Query: 282 PFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 + +S+A A A TS P+ A P G Sbjct: 339 TSQSGASSASAAQTAGASGHNVTSAPS--AVPNG 370 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/75 (33%), Positives = 31/75 (41%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 FG AS+FG S P + SG S NP P A A S+A A Sbjct: 217 FGGQQASSFGFPSF-PVSSSSGAASFSFKANPSVPPGNA-----------AAVGSSAAA- 263 Query: 318 GQPSAPAFGATSTPA 362 + P FG TS+P+ Sbjct: 264 --SNPPTFGVTSSPS 276 Score = 28.5 bits (62), Expect = 4.1 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 4/87 (4%) Frame = +3 Query: 135 PFGQSSASA---FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 P SS +A F S P G + G ++ A+NP PT + +P G+ +S+ Sbjct: 231 PVSSSSGAASFSFKANPSVPPGNAAAVGSSAAASNP---PTFGVTSSPSVPNPVGSGNSS 287 Query: 306 AGAFGQPSAPAFG-ATSTPAFGAAPAG 383 A PSA +F TS G +G Sbjct: 288 A-----PSAASFSFKTSGTTSGCGTSG 309 Score = 28.1 bits (61), Expect = 5.4 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 12/84 (14%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQ----SGFGQTSTATNPFGSP---TTAFGAQTGTTS 281 GS N S+AS +TS G SGFG ++ A + +P + A TGT+ Sbjct: 282 GSGNSSAPSAASFSFKTSGTTSGCGTSGLSGFGSSAAANSSSTAPLPVSATPSAATGTSQ 341 Query: 282 PFGATSS---TAGAFGQ--PSAPA 338 +++S TAGA G SAP+ Sbjct: 342 SGASSASAAQTAGASGHNVTSAPS 365
>MSA2_PLAFJ (P50499) Merozoite surface antigen 2 precursor (MSA-2)| Length = 264 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/86 (25%), Positives = 40/86 (46%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 G+ P + AS +++++ + + G++ T T P + T A G+Q T S +TS+ Sbjct: 54 GANAPNADTIASGSQRSTNSASTSTTNNGESQTTT-PTAADTIASGSQRSTNS--ASTST 110 Query: 303 TAGAFGQPSAPAFGATSTPAFGAAPA 380 T Q + P T T +P+ Sbjct: 111 TNNGESQTTTPTAADTPTTTESNSPS 136
>SMBT2_MOUSE (Q5DTW2) Scm-like with four MBT domains protein 2| Length = 938 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -1 Query: 274 VPVCAPKAV-VGLPKGLVAVLVWPNPDWAPKGLLEVCPKALAEDCPNG 134 VP P+ + G+P+G+ A + P+ P+G+ E P+A+ E P G Sbjct: 717 VPAGVPEDIPAGIPEGIPASI----PESIPEGIPESLPEAIPESIPKG 760
>PRY1_YEAST (P47032) Protein PRY1 precursor (Pathogen related in Sc 1)| Length = 299 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 314 +G+++ S TSS Q +T + P + TT+ A T TTS ATSS + + Sbjct: 99 WGKTTDSTTTLTSSE--STSQSLAQATTTSTPAAASTTSTPAATTTTSQAAATSSASSS 155
>KIC1_YEAST (P38692) Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase| that interacts with CDC31) (N-rich kinase 1) Length = 1080 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 2/81 (2%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP--TTAFGAQTGTTSPFGATSSTAGAFG 320 +S S T +N + + + + N GS TA Q G T+P T + Sbjct: 668 ASNSGISSTPNN----SNNYNNNTDSENSRGSSGSNTANSTQMGITNPGNVTKLSTHKAS 723 Query: 321 QPSAPAFGATSTPAFGAAPAG 383 PS P FG ++P PAG Sbjct: 724 SPSRPLFGVGTSP--NRKPAG 742
>API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease I) (API)| (Lysyl endopeptidase) Length = 653 Score = 30.0 bits (66), Expect = 1.4 Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT---TSPFGA 293 G T F SS + G +S + G G TSTATNP A G T T T GA Sbjct: 487 GLTATFTDSSTDSDGSIASRSWNF--GDGSTSTATNP-SKTYAAAGTYTVTLTVTDNGGA 543 Query: 294 TSSTAGAF---GQPSAPAF 341 T++ G+ G P A + Sbjct: 544 TNTKTGSVTVSGGPGAQTY 562
>EP15_HUMAN (P42566) Epidermal growth factor receptor substrate 15 (Protein| Eps15) (AF-1p protein) Length = 896 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/90 (27%), Positives = 32/90 (35%), Gaps = 20/90 (22%) Frame = +3 Query: 120 FGSTNPFG----------------QSSASAFGQTSSNPFGAQSGFGQTSTAT----NPFG 239 FG +PFG + S F +S++PF A + TS T +PF Sbjct: 636 FGKIDPFGGDPFKGSDPFASDCFFRQSTDPFATSSTDPFSAANNSSITSVETLKHNDPFA 695 Query: 240 SPTTAFGAQTGTTSPFGATSSTAGAFGQPS 329 T A T PF A FG S Sbjct: 696 PGGTVVAASDSATDPF------ASVFGNES 719
>NUP62_MOUSE (Q63850) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 526 Score = 29.6 bits (65), Expect = 1.8 Identities = 27/75 (36%), Positives = 32/75 (42%) Frame = +3 Query: 150 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPS 329 SA G + P GA G TST T + TTA A TT+ A S PS Sbjct: 252 SAGTLGFSLKAP-GAAPGASTTSTTTTTTTTTTTAAAAAASTTTTGFALSLKPLVSAGPS 310 Query: 330 APAFGATSTPAFGAA 374 + A AT+ PA A Sbjct: 311 SVA--ATALPASSTA 323
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 29.6 bits (65), Expect = 1.8 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 10/97 (10%) Frame = +3 Query: 120 FGSTNPFGQS----SASAFGQTSSNP------FGAQSGFGQTSTATNPFGSPTTAFGAQT 269 F +N FG+ +ASA + + P +G+Q+ FG P +P + Sbjct: 15 FIESNDFGEDPLIRAASAAEEGFTQPAAPDLLYGSQNMFGVDDA---PLSTPAVVIPPPS 71 Query: 270 GTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 T P G + + PSA G TPA A PA Sbjct: 72 PTPEPRGGKAKRS-----PSAAGSGGPPTPAAAAQPA 103
>CUTL1_MOUSE (P53564) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Cux) Length = 1515 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/72 (26%), Positives = 26/72 (36%) Frame = +3 Query: 165 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFG 344 G+ +S P G +P A T T+P AT + A P+ + Sbjct: 1392 GEDASRPRPLPEGLADAPAPVPSLAAPAAGEDAATSATAPATATEAPGAARAGPAERSSA 1451 Query: 345 ATSTPAFGAAPA 380 ST A APA Sbjct: 1452 LPSTSAPANAPA 1463
>RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Frame = +3 Query: 126 STNPFG--QSSASAFGQTSSNPFGAQS--GFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 S P+G Q SASA A S +G ++ +G+ +++GAQ ++ A Sbjct: 301 SLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRA 360 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 +S+ G S+ ++GA A Sbjct: 361 AASSYNTQGAASSLGSYGAQAASYGAQSA 389
>RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif protein 14)| (RRM-containing coactivator activator/modulator) (Synaptotagmin-interacting protein) (SYT-interacting protein) Length = 669 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Frame = +3 Query: 126 STNPFG--QSSASAFGQTSSNPFGAQS--GFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 S P+G Q SASA A S +G ++ +G+ +++GAQ ++ A Sbjct: 301 SLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRA 360 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 +S+ G S+ ++GA A Sbjct: 361 AASSYNTQGAASSLGSYGAQAASYGAQSA 389
>PGCA_HUMAN (P16112) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) (Chondroitin sulfate proteoglycan core protein 1) [Contains: Aggrecan core protein 2] Length = 2415 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/77 (28%), Positives = 31/77 (40%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 G G++S +G +S PFG G+TS + G P+ G T+ S Sbjct: 1646 GQPGVSGEASGVLYG--TSQPFGITDLSGETSGVPDLSGQPSGLPGFSGATSGVPDLVSG 1703 Query: 303 TAGAFGQPSAPAFGATS 353 T G+ S F TS Sbjct: 1704 TTSGSGESSGITFVDTS 1720
>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)| Length = 1094 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/76 (26%), Positives = 28/76 (36%) Frame = +3 Query: 135 PFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 314 P GQ++ FGQ + + Q + FGSP G Q P+G ++A Sbjct: 77 PCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQSFGSPLAPVGNQPPVLQPYGPPPTSAQV 136 Query: 315 FGQPSAPAFGATSTPA 362 Q S PA Sbjct: 137 ATQLSGMQISGAVAPA 152
>FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 231 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA-QTGTTSPFGATSS 302 S +++ S +TS G S FG T NPFG + A +G + G + + Sbjct: 77 SATSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGDRATKGDSKA 136 Query: 303 TAG 311 T G Sbjct: 137 TQG 139
>CUT2_CAEEL (P34682) Cuticlin-2 precursor| Length = 231 Score = 29.6 bits (65), Expect = 1.8 Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 2/82 (2%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G ++ AFG + P G P G + G G +P G + AFG Sbjct: 95 GYATGPAFGGAA--PIGGAYQAAPAFVGAAPVGGAYQS-GPAFGGAAPAGGAYQSGPAFG 151 Query: 321 QPSAPAFGA-TSTPAF-GAAPA 380 +APA GA S PAF GAAPA Sbjct: 152 G-AAPAGGAYQSGPAFGGAAPA 172
>Y1819_MYCTU (Q50614) Hypothetical ABC transporter ATP-binding protein| Rv1819c/MT1867 Length = 639 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +3 Query: 303 TAGAFGQPSAPAFGATSTPAFGA 371 TAGA G P+AP+ G ST FGA Sbjct: 196 TAGAGGTPNAPSNGTASTLLFGA 218
>PUM1_HUMAN (Q14671) Pumilio homolog 1 (Pumilio-1) (HsPUM)| Length = 1186 Score = 29.6 bits (65), Expect = 1.8 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 15/93 (16%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFG--------------- 260 S N QSS S F Q S+ P GFG +S+ GS FG Sbjct: 650 SLNSNSQSS-SLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRD 708 Query: 261 AQTGTTSPFGATSSTAGAFGQPSAPAFGATSTP 359 + TG++ + TSS+ G +S+P Sbjct: 709 SLTGSSDLYKRTSSSLTPIGHSFYNGLSFSSSP 741
>PHXR5_MOUSE (P08399) Per-hexamer repeat protein 5| Length = 672 Score = 29.6 bits (65), Expect = 1.8 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQ---TSTATNPFGSPTTAFGAQTGTTSPFGA 293 G+ + G + + G S G SG G T TAT T G TGT + G+ Sbjct: 328 GTGSGSGTGTGTGTGSGSGTGTGTGSGSGTAKVTGTATGTGTGTDTGTGTGTGTGTGTGS 387 Query: 294 TSSTAGAFGQPSAPA 338 S TA G + A Sbjct: 388 GSGTAKVTGTATTTA 402
>MUCAP_PIG (P12021) Apomucin (Mucin core protein) (Fragment)| Length = 1150 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 11/60 (18%) Frame = +3 Query: 237 GSPTTAFGAQTGTTSPFGATSSTAGAFGQP-----------SAPAFGATSTPAFGAAPAG 383 G+ T GA T S G+T +T + GQP APA + ++ A G + AG Sbjct: 11 GTTGTVSGASGSTGSSSGSTGATGASIGQPETSRISVAGSSGAPAVSSGASQAAGTSGAG 70
>HRPA1_XANCV (P80151) Hypersensitivity response secretion protein hrpA1| precursor Length = 607 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 4/75 (5%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT----TSPF 287 FG P G S++ FG + G SG G P++ FG + + SP Sbjct: 238 FGRVQPIGGGSSNTFGNAAQGQGGGASGI---------LGLPSSWFGGASSSDRVPVSPP 288 Query: 288 GATSSTAGAFGQPSA 332 S A A G P++ Sbjct: 289 LPGSGAAAAAGSPAS 303
>Y575_WOLSU (Q7M9Z1) UPF0323 lipoprotein WS0575 precursor| Length = 217 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/83 (26%), Positives = 43/83 (51%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAG 311 NP Q+ A ++ +Q+ F +S+AT P G+ T A +++P +S+ G Sbjct: 141 NPNYQAQQRATYKSPQAYERSQNSFKSSSSATAPRGTSTGA------SSTP---SSAKGG 191 Query: 312 AFGQPSAPAFGATSTPAFGAAPA 380 FG S+P+ +S+ + ++P+ Sbjct: 192 YFGSSSSPSSAPSSSSSSSSSPS 214
>GUXA_CELFI (P50401) Exoglucanase A precursor (EC 3.2.1.91)| (Exocellobiohydrolase A) (1,4-beta-cellobiohydrolase A) (CBP95) Length = 872 Score = 29.3 bits (64), Expect = 2.4 Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Frame = +3 Query: 165 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFG 344 G T S A+ G TS A+ S TT G TT+P T TAG S P Sbjct: 637 GTTYSFSVRAKDVAGNTSAASAAV-SATTQTGTVVDTTAPSVPTGLTAGTTTTSSVPLTW 695 Query: 345 ATSTP-AFGAAPAG 383 ST A G+ AG Sbjct: 696 TASTDNAGGSGVAG 709
>FHOD1_MOUSE (Q6P9Q4) FH1/FH2 domain-containing protein (Formin homolog| overexpressed in spleen) (FHOS) (Formin homology 2 domain-containing protein 1) Length = 1196 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/34 (50%), Positives = 21/34 (61%) Frame = +3 Query: 267 TGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFG 368 TG+ SP G+T ST A P+ PAF +T PA G Sbjct: 385 TGSASPVGSTPSTGSA--PPTNPAFSSTG-PASG 415
>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7| Length = 695 Score = 29.3 bits (64), Expect = 2.4 Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAG 311 NP S SS +G S G+T+ NP T A SP T+ Sbjct: 324 NPTDASKTKIIQPPSS--YGTGSSAGKTNPPVNPTIKVTAAI------PSPLQNTNPAPS 375 Query: 312 AFGQPS--APAFGATSTPAFGAAPA 380 F PS +PAF +ST APA Sbjct: 376 TFPNPSVASPAFPNSSTSNPSTAPA 400
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/72 (31%), Positives = 32/72 (44%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 SSA+ TSS A + T+TA + TTA TT+ T++T A Sbjct: 241 SSATTAATTSSTTTAATT-TAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTT 299 Query: 327 SAPAFGATSTPA 362 +A AT+T A Sbjct: 300 AATTTAATTTAA 311 Score = 29.3 bits (64), Expect = 2.4 Identities = 24/78 (30%), Positives = 34/78 (43%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 ST+ GQS++S +SS+P TS T PT+ + +TS +SST Sbjct: 34 STSGSGQSTSSGTTNSSSSP--------TTSPPTTSSSPPTSTHTSSPSSTST--QSSST 83 Query: 306 AGAFGQPSAPAFGATSTP 359 A + A TS P Sbjct: 84 AATSSSAPSTASSTTSIP 101 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA---QTGTTSPFG-ATSSTAGA 314 SS S GQ++S+ G T+++++P SP T + T T+SP +T S++ A Sbjct: 33 SSTSGSGQSTSS--------GTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTA 84 Query: 315 FGQPSAPAFGATST 356 SAP+ +++T Sbjct: 85 ATSSSAPSTASSTT 98 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +3 Query: 213 TSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATST 356 T+TA + TTA TT+ T++T A +P G+TST Sbjct: 292 TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTST 339 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/64 (29%), Positives = 31/64 (48%) Frame = +3 Query: 171 TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGAT 350 T+S+ + SG +S TN SPTT+ + + TSS + Q S+ A ++ Sbjct: 29 TTSSSSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSS 88 Query: 351 STPA 362 S P+ Sbjct: 89 SAPS 92 Score = 27.7 bits (60), Expect = 7.0 Identities = 26/82 (31%), Positives = 38/82 (46%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 308 T+ S +S Q+SS A + STA++ PT+ +T TT+P T+ST Sbjct: 66 TSTHTSSPSSTSTQSSST---AATSSSAPSTASSTTSIPTST-STETTTTTP---TASTT 118 Query: 309 GAFGQPSAPAFGATSTPAFGAA 374 +AP AT+T AA Sbjct: 119 TPTTTTAAPTTAATTTAVTTAA 140
>NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1)| Length = 1076 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Frame = +3 Query: 177 SNPFGAQSGFGQTSTATNPF-------GSPTTAFGAQTGTTSPFGATSSTAGAFG 320 S+ FGA + G S TNP G PTT+FG + G ++ + G Sbjct: 1005 SDIFGANAASGSNSNVTNPSSIFGGAGGVPTTSFGQPQSAPNQMGMGTNNGMSMG 1059
>HRBL_HUMAN (O95081) HIV-1 Rev-binding protein-like protein (Rev/Rex activation| domain-binding protein-related) (RAB-R) Length = 481 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +3 Query: 144 QSSASAFGQTSSNPFGAQSGFGQTSTATNPF--GSPTTAFGAQTGTTSPF 287 Q + S+FG S G + +TNPF G ++ F ++ TT+PF Sbjct: 431 QQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTTNPF 480 Score = 28.5 bits (62), Expect = 4.1 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 16/97 (16%) Frame = +3 Query: 117 MFGSTNPFGQSSASA----FGQTSSNPFGA--------QSGFGQTSTATNP----FGSPT 248 +FGS P GQ+S A G + PFGA + + P G P+ Sbjct: 273 VFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPS 332 Query: 249 TAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTP 359 + FG G P + + G G + AFGA + P Sbjct: 333 SLFG-MAGQVPPLQSVTMGGGG-GSSTGLAFGAFTNP 367
>RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Frame = +3 Query: 126 STNPFG--QSSASAFGQTSSNPFGAQS--GFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 S P+G Q SASA A S +G ++ +G+ +++GAQ ++ A Sbjct: 301 SLGPYGGVQPSASALSTYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRA 360 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 +S+ G S+ ++GA A Sbjct: 361 AASSYNTQGAASSLGSYGAQAASYGAQSA 389
>HMB1_STRPU (P13545) Homeobox protein HB1 (SPHBOX1)| Length = 308 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 6/66 (9%) Frame = +3 Query: 150 SASAFGQTSSNPFGAQSGFGQTSTATNPFG------SPTTAFGAQTGTTSPFGATSSTAG 311 +A+ +G + + F +G+G ST + +G SPT+A+ ++ T + STA Sbjct: 69 AATFYGGGTLSNFSTTAGYGDHSTTSAGYGSMSQPISPTSAWDSRMAATYNSASWGSTAA 128 Query: 312 AFGQPS 329 G S Sbjct: 129 ELGDGS 134
>K2C4_HUMAN (P19013) Keratin, type II cytoskeletal 4 (Cytokeratin-4) (CK-4)| (Keratin-4) (K4) Length = 534 Score = 29.3 bits (64), Expect = 2.4 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 9/88 (10%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGF---GQTSTATNPFGSPTTA-FGAQTGT-TSPFGATSSTAG 311 S + G+ SS FG++S + G S + + GS A FG G T FGA AG Sbjct: 34 SMSGGAGRCSSGGFGSRSLYNLRGNKSISMSVAGSRQGACFGGAGGFGTGGFGAGGFGAG 93 Query: 312 ----AFGQPSAPAFGATSTPAFGAAPAG 383 FG +F P F PAG Sbjct: 94 FGTGGFGGGFGGSFSGKGGPGFPVCPAG 121
>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein| Eps15) (AF-1p protein) Length = 897 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/63 (33%), Positives = 30/63 (47%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 FG +PFG S+PF + F QTST +PF T +T PF A+S Sbjct: 636 FGKIDPFGGDPFKG-----SDPFASDCFFKQTST--DPF---------TTSSTDPFSASS 679 Query: 300 STA 308 +++ Sbjct: 680 NSS 682
>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1185 Score = 29.3 bits (64), Expect = 2.4 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 2/88 (2%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGF-GQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 +++P G +AS G P+G ++ G TAT P P + +TGT + TS Sbjct: 617 ASSPAGYKTASPPGPP---PYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSP 673 Query: 303 TAG-AFGQPSAPAFGATSTPAFGAAPAG 383 AG +P +P G P A P+G Sbjct: 674 PAGPGTFKPGSPTVGPGPLPP--AGPSG 699
>FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 231 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +3 Query: 144 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA-QTGTTSPFGATSSTAG 311 +++ S +TS G S FG T NPFG + A +G + G + +T G Sbjct: 83 KNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGDRATKGDSKATQG 139
>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1186 Score = 29.3 bits (64), Expect = 2.4 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 2/88 (2%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGF-GQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 +++P G +AS G P+G ++ G TAT P P + +TGT + TS Sbjct: 618 ASSPAGYKTASPPGPP---PYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSP 674 Query: 303 TAG-AFGQPSAPAFGATSTPAFGAAPAG 383 AG +P +P G P A P+G Sbjct: 675 PAGPGTFKPGSPTVGPGPLPP--AGPSG 700
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS---PFGATSSTAGAF 317 ++A+ T+S+ A + T+TA + TTA TT+ G+TS+T + Sbjct: 216 TAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTGAST 275 Query: 318 GQPSA-PAFGATSTPAFGAAPA 380 PSA A AT T +A A Sbjct: 276 STPSASTATSATPTSTSTSAAA 297 Score = 29.3 bits (64), Expect = 2.4 Identities = 24/78 (30%), Positives = 34/78 (43%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 ST+ GQS++S +SS+P TS T PT+ + +TS +SST Sbjct: 34 STSGSGQSTSSGTTNSSSSP--------TTSPPTTSSSPPTSTHTSSPSSTST--QSSST 83 Query: 306 AGAFGQPSAPAFGATSTP 359 A + A TS P Sbjct: 84 AATSSSAPSTASSTTSIP 101 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA---QTGTTSPFG-ATSSTAGA 314 SS S GQ++S+ G T+++++P SP T + T T+SP +T S++ A Sbjct: 33 SSTSGSGQSTSS--------GTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTA 84 Query: 315 FGQPSAPAFGATST 356 SAP+ +++T Sbjct: 85 ATSSSAPSTASSTT 98 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 ++ +A T++ A + TS+AT + TTA TT+ T++T A Sbjct: 203 ATTTAATTTAATTTAATTTAATTSSATT--AATTTAATTTAATTTAATTTAATTTAATTT 260 Query: 327 SAPAFGATST 356 +P G+TST Sbjct: 261 GSPTSGSTST 270 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/64 (29%), Positives = 31/64 (48%) Frame = +3 Query: 171 TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGAT 350 T+S+ + SG +S TN SPTT+ + + TSS + Q S+ A ++ Sbjct: 29 TTSSSSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSS 88 Query: 351 STPA 362 S P+ Sbjct: 89 SAPS 92 Score = 27.7 bits (60), Expect = 7.0 Identities = 26/82 (31%), Positives = 38/82 (46%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 308 T+ S +S Q+SS A + STA++ PT+ +T TT+P T+ST Sbjct: 66 TSTHTSSPSSTSTQSSST---AATSSSAPSTASSTTSIPTST-STETTTTTP---TASTT 118 Query: 309 GAFGQPSAPAFGATSTPAFGAA 374 +AP AT+T AA Sbjct: 119 TPTTTTAAPTTAATTTAVTTAA 140
>RSMN_RAT (P63164) Small nuclear ribonucleoprotein-associated protein N| (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) Length = 240 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/59 (32%), Positives = 21/59 (35%) Frame = +3 Query: 207 GQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 G + P G T A A T S GA + G P P AT P A P G Sbjct: 136 GPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPG 194
>RSMN_MOUSE (P63163) Small nuclear ribonucleoprotein-associated protein N| (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific splicing protein) Length = 240 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/59 (32%), Positives = 21/59 (35%) Frame = +3 Query: 207 GQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 G + P G T A A T S GA + G P P AT P A P G Sbjct: 136 GPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPG 194
>RSMN_HUMAN (P63162) Small nuclear ribonucleoprotein-associated protein N| (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific splicing protein) Length = 240 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/59 (32%), Positives = 21/59 (35%) Frame = +3 Query: 207 GQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 G + P G T A A T S GA + G P P AT P A P G Sbjct: 136 GPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPG 194
>NUP62_RAT (P17955) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 525 Score = 29.3 bits (64), Expect = 2.4 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%) Frame = +3 Query: 150 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG--- 320 S SA T++ P GF + P G+ TT+ T TT+ +TSS+ G Sbjct: 240 SLSAPATTAATPTAGTLGFSLKAPGAAP-GASTTSTTTTTTTTTTTASTSSSTTTTGFAL 298 Query: 321 --QPSAPA----FGATSTPAFGAA 374 +P PA AT+ PA A Sbjct: 299 SLKPLVPAGPSSVAATALPASSTA 322 Score = 28.9 bits (63), Expect = 3.1 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 14/100 (14%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQT--------------STATNPFGSPTTAFGA 263 ST+ F ++ ++ QT FG G T STA P + T +FG Sbjct: 58 STSLFSLATQTSTTQTPGFNFGTTPASGGTGFSLGISTPKLSLSSTAATPATANTGSFGL 117 Query: 264 QTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 + T + + +ST+ P+ FG+++T A G Sbjct: 118 GSSTLTNAISGASTSSQGTAPTGFVFGSSTTSAPSTGTTG 157 Score = 28.1 bits (61), Expect = 5.4 Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 11/80 (13%) Frame = +3 Query: 162 FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG-----------TTSPFGATSSTA 308 FG T + G G +T+T T G +A G TG T+P + S A Sbjct: 6 FGGTGAPAGGFTFGTAKTATTTPATGFSFSASGTGTGGFNFGTPSQPAATTPSTSLFSLA 65 Query: 309 GAFGQPSAPAFGATSTPAFG 368 P F +TPA G Sbjct: 66 TQTSTTQTPGFNFGTTPASG 85
>K2C6C_HUMAN (P48666) Keratin, type II cytoskeletal 6C (Cytokeratin-6C) (CK 6C)| (K6c keratin) Length = 563 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 7/73 (9%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQS-----GFGQTSTATNPFGSPTTAFGAQTGTTSPF--GAT 296 FG S G + G S G+G + A+ FG + FG G F G Sbjct: 55 FGSRSLYGLGGSKRISIGGGSCAISGGYGSRARASYGFGGAGSGFGFGGGAGIGFDLGGG 114 Query: 297 SSTAGAFGQPSAP 335 + AG FG P P Sbjct: 115 AGLAGGFGGPGFP 127
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 8/57 (14%) Frame = +3 Query: 237 GSPTTAFGAQTG---TTSPFGA-----TSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 GSP T G TSP G+ TSST ++GQP A + T AP+G Sbjct: 1389 GSPATTASPTRGYMTPTSPAGSERSPSTSSTIHSYGQPPTTANYGSQTEELPHAPSG 1445
>COE4_MOUSE (Q8K4J2) Transcription factor COE4 (Early B-cell factor 4) (EBF-4)| (Olf-1/EBF-like 4) (OE-4) (O/E-4) Length = 599 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 4/88 (4%) Frame = +3 Query: 123 GSTNP---FGQSSASAFGQTSSNPFGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFG 290 G T P + +S SA + + +P QS +G +G+P G+ S Sbjct: 442 GDTTPEPGYARSCGSASPRFAPSPGSQQSSYGSGLGAGLGSYGAPGVTGLGVPGSPSFLN 501 Query: 291 ATSSTAGAFGQPSAPAFGATSTPAFGAA 374 +++T+ PS+P A S+ + AA Sbjct: 502 GSTATSPFAIMPSSPPLAAASSMSLPAA 529
>YJ4A_SCHPO (P78797) Hypothetical proline-rich protein C70.10 precursor| Length = 155 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 6/91 (6%) Frame = +3 Query: 126 STNPFGQSSA--SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 +T P ++ A A +P QS + + T+P GSP T + T+ Sbjct: 41 TTRPMAEARARPGATAVPRRSPTSPQSAYVPATVYTSPIGSPRRGSVRYTHVMAHPNTTT 100 Query: 300 STAGAFGQ----PSAPAFGATSTPAFGAAPA 380 + + + P +PA A++TP A+PA Sbjct: 101 TVSENLPEEVPPPYSPAATASNTPQNEASPA 131
>CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)| Length = 442 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG 272 GQS+ S GQTS++ + SG G S + + GS + A A +G Sbjct: 356 GQSTGSQSGQTSASGQASASGSGSGSGSGSGSGSGSGAVEASSG 399 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG 272 G T+ GQ+SAS G S + G+ SG G ++ + ++G G Sbjct: 364 GQTSASGQASASGSGSGSGSGSGSGSGSGAVEASSGNYWIVKNSWGTSWG 413
>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1852 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/87 (25%), Positives = 37/87 (42%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 + T+P ++ + TS S T T ++P +PT+ G + SP T Sbjct: 1730 YSPTSPSYSPTSPQYSPTSPQ----YSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTY 1785 Query: 300 STAGAFGQPSAPAFGATSTPAFGAAPA 380 S PS+P + TS P + +P+ Sbjct: 1786 SPTSPSYTPSSPQYSPTS-PTYTPSPS 1811
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 28.9 bits (63), Expect = 3.1 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 G ++P S AS+ G S P A + + +P G P A A+ T +P ++ Sbjct: 165 GRSSPSAASPASSSG--SPGPSAAPRRW--SPARGDPVGEPGPA--ARPRTPAPPAQPAA 218 Query: 303 TAGAFGQ-----PSAPAFGATSTPAFGAAPA 380 A A + P++PA G S P G AP+ Sbjct: 219 VAAAPARRGPASPASPAAGPVSAPGGGGAPS 249
>CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog| Length = 319 Score = 28.9 bits (63), Expect = 3.1 Identities = 25/84 (29%), Positives = 29/84 (34%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 S NP ++ A QTS NP + T NP PT+ Q P TS Sbjct: 30 SENPPSPPTSPAAPQTSENPPSPPTSPAVPQTRENPPSPPTSPAAPQPRENPPSPPTSPA 89 Query: 306 AGAFGQPSAPAFGATSTPAFGAAP 377 A P S P AAP Sbjct: 90 A------PQPRENPPSPPTSPAAP 107
>SPT6H_DROME (Q9W420) Transcription elongation factor SPT6| Length = 1831 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = +3 Query: 189 GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTP 359 G S G ++ T +G +G+++P SS+ +G S P+FGA +TP Sbjct: 1579 GISSAVGGGGSSAYSITQSITGYGT-SGSSAPGAGVSSSH--YGSSSTPSFGAINTP 1632 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Frame = +3 Query: 156 SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQ------TGTTSPFGATSSTAGAF 317 S+ QTS P S G + T G + G T + + +G + S+A Sbjct: 1552 SSSSQTSLGPQAPYSVTGSVTGGTPRSGISSAVGGGGSSAYSITQSITGYGTSGSSAPGA 1611 Query: 318 GQPSAPAFGATSTPAFGA 371 G S+ +G++STP+FGA Sbjct: 1612 GVSSSH-YGSSSTPSFGA 1628
>K1C3_XENLA (P05782) Keratin, type I cytoskeletal 47 kDa (Fragment)| Length = 280 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/76 (31%), Positives = 36/76 (47%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G S++G SS+ FG G G FG +GA G + G +SS++G FG Sbjct: 19 GGGFGSSYGGGSSSSFGGGYGAG--------FGG---GYGAGFGGGASSGFSSSSSGGFG 67 Query: 321 QPSAPAFGATSTPAFG 368 +A ++S +FG Sbjct: 68 AAAA----SSSFSSFG 79 Score = 27.3 bits (59), Expect = 9.1 Identities = 22/77 (28%), Positives = 34/77 (44%) Frame = +3 Query: 150 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPS 329 S+S++ S N G GFG + G +++FG G G FG + Sbjct: 5 SSSSYSVQSKNVSGG-GGFGSSYG-----GGSSSSFGGGYGA----GFGGGYGAGFGGGA 54 Query: 330 APAFGATSTPAFGAAPA 380 + F ++S+ FGAA A Sbjct: 55 SSGFSSSSSGGFGAAAA 71
>YPS1_YEAST (P32329) Aspartic proteinase 3 precursor (EC 3.4.23.41) (Yapsin-1)| Length = 569 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/69 (26%), Positives = 30/69 (43%) Frame = +3 Query: 174 SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATS 353 S NP+ + + G + +++ G+ +PFG + T A G P+A G S Sbjct: 112 SDNPYCSSNSMGSSRRRVIDKRDDSSSGGSLINDINPFGWLTGTGSAIG-PTATGLGGGS 170 Query: 354 TPAFGAAPA 380 A + PA Sbjct: 171 GTATQSVPA 179
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 28.9 bits (63), Expect = 3.1 Identities = 27/92 (29%), Positives = 29/92 (31%), Gaps = 5/92 (5%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSS-----NPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 287 G P G A A G P G GQ NP G P + G P Sbjct: 149 GPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNP-GRPGQSGQRSRGLPGPS 207 Query: 288 GATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 G G G P P G+T PA P G Sbjct: 208 GRPGPQ-GPPGAPGQPGSGSTPGPAGPPGPPG 238
>PTPRM_MOUSE (P28828) Receptor-type tyrosine-protein phosphatase mu precursor| (EC 3.1.3.48) (Protein-tyrosine phosphatase mu) (R-PTP-mu) Length = 1452 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = +3 Query: 255 FGAQTGTTSPFGATSSTAGAFGQPSAPAF----GATSTPAF 365 FG GTT F +STA FG P+ F A S PA+ Sbjct: 551 FGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAY 591
>PTPRM_HUMAN (P28827) Receptor-type tyrosine-protein phosphatase mu precursor| (EC 3.1.3.48) (Protein-tyrosine phosphatase mu) (R-PTP-mu) Length = 1452 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = +3 Query: 255 FGAQTGTTSPFGATSSTAGAFGQPSAPAF----GATSTPAF 365 FG GTT F +STA FG P+ F A S PA+ Sbjct: 551 FGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAY 591
>K1C5_XENLA (P08778) Keratin, type I cytoskeletal 47 kDa| Length = 433 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +3 Query: 171 TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGAT 350 + S FG + G + G+ T + T+S FG +S+ AG+ +PAF + Sbjct: 9 SQSARFGVLASPGVNRARSVAGGASTVRMSSANVTSSAFGGSSAFAGSSSFAGSPAFNVS 68 Query: 351 ST 356 T Sbjct: 69 VT 70
>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic| region Length = 551 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG-ATSSTAGAFGQ 323 SS+ + +SS F S F +S++++ S +++ + + ++S F +TSS++ + Sbjct: 222 SSSYSSSSSSSTLFSYSSSFSSSSSSSS--SSSSSSSSSSSSSSSYFTLSTSSSSSIYSS 279 Query: 324 PSAPAFGATST 356 S P+F ++S+ Sbjct: 280 SSYPSFSSSSS 290
>CECR6_MOUSE (Q99MX7) Cat eye syndrome critical region protein 6 homolog| Length = 572 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/61 (32%), Positives = 28/61 (45%) Frame = +3 Query: 192 AQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGA 371 AQ G ++TA S +T + + T + FGA ++ G S A GA T GA Sbjct: 101 AQGGVPVSATAPAAASSTSTPTSSCSMTAADFGAGAAAGTVGGPGSRSAVGAGGTGTGGA 160 Query: 372 A 374 A Sbjct: 161 A 161
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/59 (30%), Positives = 20/59 (33%) Frame = +3 Query: 162 FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPA 338 F P G GF G FG + G G T GAFG+P PA Sbjct: 362 FAGRPGGPGGGGGGFAGRPGGPGGGGGGRPGFGGRPGGP---GGRGGTQGAFGRPGGPA 417 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/34 (35%), Positives = 13/34 (38%) Frame = +3 Query: 282 PFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 P G G G+P P G P FG P G Sbjct: 366 PGGPGGGGGGFAGRPGGPGGGGGGRPGFGGRPGG 399
>PYRD_HALMA (Q5UYF1) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 350 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/44 (31%), Positives = 19/44 (43%) Frame = +3 Query: 150 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 281 + AFG T NP G +GF + +T S F G T+ Sbjct: 51 AVEAFGHTFDNPVGVAAGFDKNATIPETLASLGFGFAEVGGVTA 94
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Frame = +3 Query: 171 TSSNPFGAQSGFGQTSTATNPFGSPTTA-FGAQTG--TTSPFGATSSTAGAFGQPSAPAF 341 T ++P G++ +STA + SPTTA +G+QT +P G ++ A +P + + Sbjct: 1398 TPASPAGSERSPSPSSTAHSYGHSPTTANYGSQTEDLPQAPSGLAAAGRAAREKPLSASD 1457 Query: 342 GATSTP 359 G TP Sbjct: 1458 GEGGTP 1463
>P100_HCMVA (P08318) Large structural phosphoprotein (pp150) (150 kDa matrix| phosphoprotein) (Basic phosphoprotein) (BPP) (Tegument protein UL32) Length = 1048 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 6/59 (10%) Frame = +3 Query: 219 TATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPA------FGATSTPAFGAAP 377 T F PT FGA + GA T +APA F T TP G +P Sbjct: 567 TTAYKFEQPTLTFGAGVNVPAGAGAAILTPTPVNPSTAPAPAPTPTFAGTQTPVNGNSP 625
>NCOA5_HUMAN (Q9HCD5) Nuclear receptor coactivator 5 (NCoA-5) (Coactivator| independent of AF-2) (CIA) Length = 579 Score = 28.5 bits (62), Expect = 4.1 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 1/84 (1%) Frame = +3 Query: 126 STNPFGQSS-ASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 S P G +S AS Q SS P QSG S P PT+ Q S F + + Sbjct: 387 SRQPLGATSGASLKTQPSSQPL--QSGQVLPSATPTPSAPPTSQQELQAKILSLFNSGTV 444 Query: 303 TAGAFGQPSAPAFGATSTPAFGAA 374 TA + + A G T F A Sbjct: 445 TANSSSASPSVAAGNTPNQNFSTA 468
>ASPT_TETHA (Q8L3K8) Aspartate/alanine antiporter| Length = 543 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = +3 Query: 243 PTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAF 365 P + GAQTG + A + + G ++P F A PA+ Sbjct: 484 PISIIGAQTGADTLSAALNDVSERVGSDASPFFAAAVAPAY 524
>P2RX1_MOUSE (P51576) P2X purinoceptor 1 (ATP receptor) (P2X1) (Purinergic| receptor) Length = 399 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/61 (31%), Positives = 24/61 (39%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 F + A G + NP G G Q + P + A G +TG PF T T F Sbjct: 106 FIMTPQQAQGHCAENPEG---GICQDDSGCTPGKAERKAQGIRTGNCVPFNGTVKTCEIF 162 Query: 318 G 320 G Sbjct: 163 G 163
>MUCSM_CANFA (P83762) Submaxillary mucin (CSM) (Fragment)| Length = 89 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/64 (32%), Positives = 27/64 (42%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G +ASA G T G + G ST + G+P T + GTT + S G G Sbjct: 24 GSPTASARGGTPGGSEGFTAAPGSESTGGHS-GAPGTTLAGRAGTTLGPRSEPSGTGVGG 82 Query: 321 QPSA 332 P A Sbjct: 83 SPVA 86
>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (FAP-A) Length = 381 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 4/88 (4%) Frame = +3 Query: 126 STNPFGQSSASAFGQT----SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 S +P + +A A ++ + P + G + A G+P A G T+P Sbjct: 282 SNDPVDKVAAKALAESIQAWTPPPAPPAAPGGPGAPAPGAPGAPAPGAPAAPGVTAPAAP 341 Query: 294 TSSTAGAFGQPSAPAFGATSTPAFGAAP 377 + GA P APA PA +P Sbjct: 342 APAAPGAPAAPGAPAPEPGQAPAVEVSP 369
>YO86_CAEEL (P34622) Hypothetical protein ZK1236.6| Length = 206 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Frame = +3 Query: 201 GFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP--SAPAFGATSTP 359 G+G +S +NP+G+ + +GA + + + QP P +G P Sbjct: 131 GYGTSSQTSNPYGASASPYGAPQQNPQQYQEQPQSYQTYQQPQQQQPQYGQQQNP 185
>EPN2_HUMAN (O95208) Epsin-2 (EPS-15-interacting protein 2)| Length = 642 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = +3 Query: 258 GAQTGTTSPFGATSST--AGAFGQPSAPAFGATSTPAFGAAPA 380 G P+G ++ST +G P+APA + P+FG PA Sbjct: 346 GPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPA 388
>ASCL1_MOUSE (Q02067) Achaete-scute homolog 1 (Mash-1)| Length = 231 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Frame = +3 Query: 195 QSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATS-TPAFGA 371 +SG GQ PF P F A + A ++ + QP AP A +P + Sbjct: 8 ESGAGQQPQPPQPFLPPAACFFATAAAAAAAAAAAAQSAQQQQPQAPPQQAPQLSPVADS 67 Query: 372 APAG 383 P+G Sbjct: 68 QPSG 71
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/77 (25%), Positives = 34/77 (44%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 S+ SS+S T+S+ S +S+++ S T+ + T T+S TSS+ Sbjct: 159 SSATHSSSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSS 218 Query: 306 AGAFGQPSAPAFGATST 356 A + ATS+ Sbjct: 219 TSASSSSETSSTQATSS 235 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/76 (23%), Positives = 37/76 (48%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 S++ S+ S TSS + S +S+ + S T++ A + +T+ +++ST Sbjct: 187 SSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTST 246 Query: 306 AGAFGQPSAPAFGATS 353 A PS+ + G ++ Sbjct: 247 ATVTSTPSSTSIGTST 262 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/72 (26%), Positives = 37/72 (51%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 326 SS+S+ ++S + TST+++P + ++ + + TS ATSS+ + Sbjct: 184 SSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSS 243 Query: 327 SAPAFGATSTPA 362 ++ A TSTP+ Sbjct: 244 TSTA-TVTSTPS 254
>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG repeat| protein 26) (Glycin-tryptophan protein of 182 kDa) (GW182 autoantigen) (GW1 protein) (EMSY interactor protein) Length = 1962 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/70 (27%), Positives = 34/70 (48%) Frame = +3 Query: 174 SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATS 353 S+ + SG+G+ P+G P+T TS +G + ++G+P A A+S Sbjct: 1050 SNKEASSGSGWGE------PWGEPSTPATTVDNGTSAWGKPIDSGPSWGEPIA---AASS 1100 Query: 354 TPAFGAAPAG 383 T +G++ G Sbjct: 1101 TSTWGSSSVG 1110
>KAPR_TRIAT (Q86ZN7) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 462 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = +3 Query: 162 FGQTSSNP-FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 F + +NP FG S S ++PFG+ FG + +PFG ++S Sbjct: 59 FPPSPTNPHFGMMS-----SQFSSPFGANANPFGGSSSNPNPFGGSAS 101
>GCR_ONCMY (P49843) Glucocorticoid receptor (GR)| Length = 758 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +3 Query: 204 FGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFG 344 F Q S+ P S + G+ +G + P+GA +STA + Q P FG Sbjct: 282 FCQISSLDLP--STHNSAGSISGPSYPYGANTSTAVSLQQDQKPVFG 326
>ILF3_MOUSE (Q9Z1X4) Interleukin enhancer-binding factor 3| Length = 898 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPF--GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 F + G+S +++G + S+ + G+ G+G S ++ + + +Q+ +SP G+ Sbjct: 809 FNYSGSGGRSGGNSYGSSGSSSYNTGSHGGYGTGSGGSSSYQGKQGGYSSQSNYSSP-GS 867 Query: 294 TSSTAG 311 + S +G Sbjct: 868 SQSYSG 873
>CPO_DROME (Q01617) Protein couch potato| Length = 738 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +3 Query: 147 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 +SA+A T+ +P G+ + T+TAT A A TGT + + S Sbjct: 354 NSATASAPTTPSPAGSVTSAAPTATATAAAAGSAAATAAATGTPATSAVSDS 405
>ARX_MOUSE (O35085) Homeobox protein ARX (Aristaless-related homeobox)| Length = 564 Score = 28.5 bits (62), Expect = 4.1 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Frame = +3 Query: 174 SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPS-----APA 338 S P G + G F SP AFG T +P + S+ A QP+ A A Sbjct: 458 SGAPLGLSTFLGAAVFRHPAFISP--AFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVA 515 Query: 339 FGATSTPAFGAA 374 GA + PA AA Sbjct: 516 SGALADPATAAA 527
>ARX_HUMAN (Q96QS3) Homeobox protein ARX (Aristaless-related homeobox)| Length = 562 Score = 28.5 bits (62), Expect = 4.1 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Frame = +3 Query: 174 SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPS-----APA 338 S P G + G F SP AFG T +P + S+ A QP+ A A Sbjct: 456 SGAPLGLSTFLGAAVFRHPAFISP--AFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVA 513 Query: 339 FGATSTPAFGAA 374 GA + PA AA Sbjct: 514 SGALADPATAAA 525
>SSB_BACAN (Q81JI3) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 172 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +3 Query: 144 QSSASAFGQTSSNPFGAQSGFGQTSTATN 230 Q S + FG SSNPFG S G N Sbjct: 118 QPSGAGFGNQSSNPFGQSSNSGNQGNQGN 146
>P53_MOUSE (P02340) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 390 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +2 Query: 158 RFWADL*QPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 283 + W P S +R + QH + +R+ H RC+DGD LA Sbjct: 141 QLWVSATPPAGSRVRAMAIYKKSQHMTEVVRRCPHHERCSDGDGLA 186
>MUCS_BOVIN (P98091) Submaxillary mucin-like protein| Length = 563 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +3 Query: 213 TSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 T T T+ S T G QTG T T+S+ G F Sbjct: 176 TETTTSRHSSDATGSGIQTGITGTGSGTTSSPGGF 210
>DPOL_ASFL6 (P43139) DNA polymerase (EC 2.7.7.7)| Length = 1244 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT 251 NP G + + G + NP G +G + A NP G+P + Sbjct: 1083 NPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAS 1122 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP 245 NP G + + G + NP G +G + A NP G+P Sbjct: 1079 NPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNP 1116 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP 245 NP G + + G + NP G +G + A NP G+P Sbjct: 1075 NPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNP 1112 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 Query: 132 NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP 245 NP G + + G + NP G +G + A NP G+P Sbjct: 1071 NPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNP 1108
>VLPC_MYCHR (P29230) Variant surface antigen C precursor (VLPC prolipoprotein)| Length = 160 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/63 (31%), Positives = 28/63 (44%) Frame = +3 Query: 171 TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGAT 350 + S+ G QSG +T GS T+ G Q+GTTS G T+ S + Sbjct: 43 SGSSTSGDQSG----TTTGGHSGSGTSTSGGQSGTTSGSGTTTGEQTETAPKSPESGSQE 98 Query: 351 STP 359 +TP Sbjct: 99 ATP 101
>RNP1_CAEEL (Q10667) RNA-binding protein rnp-1| Length = 305 Score = 28.1 bits (61), Expect = 5.4 Identities = 25/88 (28%), Positives = 32/88 (36%), Gaps = 1/88 (1%) Frame = +3 Query: 123 GSTNPFGQSSASAFG-QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 GST F SS+S +S P GA T + P A +P+ S Sbjct: 190 GSTAGFALSSSSTVPVPVASAPPGA------TQLSAAPVSYQPNAPPVIASINAPYAVAS 243 Query: 300 STAGAFGQPSAPAFGATSTPAFGAAPAG 383 + + SAP A S P PAG Sbjct: 244 NLRAPYALQSAPYASAASAPYGSVTPAG 271
>YCFD_SCHPO (O94725) Protein C1393.13| Length = 442 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%) Frame = -1 Query: 295 VAPKGEVVPVCAPKA--VVGLPKGLVAVLVWPNPDWAPKG---LLEVCPK 161 +A K ++ + KA VVGL KG+ + NP W G ++E CPK Sbjct: 392 IAGKFNILALRTIKADVVVGLGKGVYEEIAKDNPHWERTGKYAVVEFCPK 441
>GSPD_XANCP (P29041) General secretion pathway protein D precursor| Length = 759 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/71 (30%), Positives = 28/71 (39%) Frame = +3 Query: 117 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 296 +FG G S S N G SG + GS + A G G TS + Sbjct: 350 VFGGRGNGGNSGPSLVPGGVVNMLGNNSGGADRDES---LGSSSGATGGDIGGTSNGSSQ 406 Query: 297 SSTAGAFGQPS 329 S T+G+FG S Sbjct: 407 SGTSGSFGGSS 417
>HCFC1_HUMAN (P51610) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory| protein) (VCAF) (CFF) [Contains: HCF N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N-terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain Length = 2035 Score = 28.1 bits (61), Expect = 5.4 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 8/86 (9%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA--------QTGTTSP 284 T+ GQ + S + SNP G T+TAT + G +TGTT+ Sbjct: 1061 TSTVGQQNGSVV-RVCSNPPCETHETGTTNTATTATSNMAGQHGCSNPPCETHETGTTNT 1119 Query: 285 FGATSSTAGAFGQPSAPAFGATSTPA 362 S+ GA Q A A TPA Sbjct: 1120 ATTAMSSVGANHQRDARRACAAGTPA 1145
>COE2_MOUSE (O08792) Transcription factor COE2 (Early B-cell factor 2) (EBF-2)| (Olf-1/EBF-like 3) (OE-3) (O/E-3) (Metencephalon-mesencephalon-olfactory transcription factor 1) (MET-mesencephalon-olfactory transcription factor 1) (MET-mesencephalon-olfacto Length = 575 Score = 28.1 bits (61), Expect = 5.4 Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Frame = +3 Query: 126 STNPFGQSSASAFGQ----TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 S +P G SS+S Q TSSN S + GSP G+ TG SP+G Sbjct: 455 SISPRGYSSSSTPQQSNYSTSSNSMNGYSNVPMANLGVP--GSPGFLNGSPTG--SPYGI 510 Query: 294 TSS--TAGAFGQPSAPAFGATSTPA 362 SS T G+ S F ++ PA Sbjct: 511 MSSSPTVGSSSTSSILPFSSSVFPA 535
>CLFA_STAAS (Q6GB45) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 928 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/57 (33%), Positives = 23/57 (40%) Frame = +3 Query: 168 QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPA 338 +TSSN + G+TS A NP TT TT T A Q + PA Sbjct: 77 KTSSN-----TNNGETSVAQNPAQQETTQSALTNATTEETPVTGEATTATNQANTPA 128
>C3G_DROME (O77086) Guanine nucleotide-releasing factor 2 (CRK SH3-binding| GNRP) Length = 1571 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 8/70 (11%) Frame = +3 Query: 123 GSTNPFGQ---SSASAFGQTSSNPFGAQSGF-----GQTSTATNPFGSPTTAFGAQTGTT 278 G T G+ ++AS G+T+SN +SGF +TST T + ++ + + + Sbjct: 689 GGTGGAGEGVAAAASGDGETNSNRHSNESGFVSMREFRTSTQTTDYSVQSSTKSSSSNSE 748 Query: 279 SPFGATSSTA 308 F + STA Sbjct: 749 IAFSISESTA 758
>LARP_DROME (Q9VAW5) La-related protein (dlarp)| Length = 1403 Score = 28.1 bits (61), Expect = 5.4 Identities = 26/77 (33%), Positives = 32/77 (41%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 S N Q++AS +T Q T T T + T A A TTS ATSS Sbjct: 37 SQNNNAQNTASN-KKTQQQQQPQQGATTTTQTTTAAAAAATAAAAATAATTSAAAATSSA 95 Query: 306 AGAFGQPSAPAFGATST 356 A P+A AT+T Sbjct: 96 AAV---PAATTETATTT 109
>COLL7_MIMIV (Q5UNS9) Collagen-like protein 7| Length = 1937 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 8/73 (10%) Frame = +3 Query: 189 GAQSGFGQTSTATNPFGSPTTAFGAQ--------TGTTSPFGATSSTAGAFGQPSAPAFG 344 GA+ S+ N G TT FGAQ +G T G+ ++ + AFGQ + + Sbjct: 1274 GAEGSIAFGSSEIN--GIITTGFGAQGSIVGGYSSGGTIATGSGANASEAFGQATTGSLI 1331 Query: 345 ATSTPAFGAAPAG 383 T A G++ G Sbjct: 1332 TTGPGAIGSSTRG 1344
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/70 (31%), Positives = 27/70 (38%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 F +S A S F QT + FGS A TGTT F ++T G Sbjct: 739 FEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAPTGTTGAFPGAAATVGGV 798 Query: 318 GQPSAPAFGA 347 P A + GA Sbjct: 799 -DPFATSGGA 807
>PPQ1_YEAST (P32945) Serine/threonine-protein phosphatase PPQ (EC 3.1.3.16)| Length = 549 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/73 (26%), Positives = 33/73 (45%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 S N S +S + + S + ++A++ S + G + SP ++S Sbjct: 142 SNNILTSPSYRESNYSSPSSYSFSSYYSSATSASSSTSSFLKSSGLSSRVKSP--SSSVK 199 Query: 306 AGAFGQPSAPAFG 344 AG+FG PS+P G Sbjct: 200 AGSFGAPSSPTSG 212
>ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) Length = 407 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = +3 Query: 189 GAQSGFGQTS---TATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTP 359 GA +G G S ++ P S +++ +Q+ +P TSST A PSAPA + ++P Sbjct: 184 GALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTR-ATPAPSAPAAASATSP 242 Query: 360 A 362 + Sbjct: 243 S 243
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Frame = +3 Query: 240 SPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGA-----TSTPAFGAAPAG 383 S +TA GA T G+TS A G ++ +FGA T++ +FGA+ G Sbjct: 602 SSSTASGASASVT---GSTSFGASVTGSTASTSFGASVTGSTASTSFGASVTG 651
>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3511 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -1 Query: 289 PKGEVVPVCAPKAVVGLPKGLVAVLVWPNP-DWAPKGLLEVCPK 161 P+ + P PK VVG VLV P P WAP G + PK Sbjct: 2470 PERPLAPEARPKTVVGTGPPAKPVLVRPTPQSWAP-GSVAKAPK 2512
>CDSN_MACMU (Q5TM45) Corneodesmosin precursor| Length = 534 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 G SS+S G + S P G + + GS + + G+ TG++S ++SST Sbjct: 123 GASSSSQLGGSGSQP-------GSSGSQPGSSGSHSGSSGSNTGSSSSHSSSSST 170
>TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (TIF1-gamma)| (Tripartite motif protein 33) Length = 1142 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +3 Query: 207 GQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 G + A++ + A G+ P GA S+ A A APA PA APA Sbjct: 65 GGVAAASSSSAPAASVPAASVGSAVPGGAASTPAPAAAPAPAPAPAPAPAPAPAPAPA 122
>PYRD_DROME (P32748) Dihydroorotate dehydrogenase, mitochondrial precursor (EC| 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase) Length = 405 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Frame = +3 Query: 156 SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFG-AQTGTTSPFGATSSTAGAFGQPSA 332 S FG+ SNP G +GF + + A + G FG + GT +P A G P Sbjct: 89 SFFGRMLSNPIGIAAGFDKNAEAVD--GLQDLGFGFIEVGTVTP-------AAQEGNPKP 139 Query: 333 PAFGATSTPA 362 F T A Sbjct: 140 RVFRLTEDKA 149
>CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity factor 6| Length = 548 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/61 (29%), Positives = 21/61 (34%), Gaps = 1/61 (1%) Frame = +3 Query: 204 FGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF-GQPSAPAFGATSTPAFGAAPA 380 +GQ S T P G P +G G P GAF +P P P P Sbjct: 285 YGQPSIVTLPPGPPPPGYGPPPGPPPPQQGPPPPPGAFPPRPPGPPMALGPPPHLPGPPP 344 Query: 381 G 383 G Sbjct: 345 G 345
>COE2_HUMAN (Q9HAK2) Transcription factor COE2 (Early B-cell factor 2) (EBF-2)| (Fragment) Length = 343 Score = 28.1 bits (61), Expect = 5.4 Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Frame = +3 Query: 126 STNPFGQSSASAFGQ----TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 S +P G SS+S Q TSSN S + GSP G+ TG SP+G Sbjct: 223 SISPRGYSSSSTPQQSNYSTSSNSMNGYSNVPMANLGVP--GSPGFLNGSPTG--SPYGI 278 Query: 294 TSS--TAGAFGQPSAPAFGATSTPA 362 SS T G+ S F ++ PA Sbjct: 279 MSSSPTVGSSSTSSILPFSSSVFPA 303
>CLFA_STAAW (Q8NXJ1) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 946 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/57 (33%), Positives = 23/57 (40%) Frame = +3 Query: 168 QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPA 338 +TSSN + G+TS A NP TT TT T A Q + PA Sbjct: 77 KTSSN-----TNNGETSVAQNPAQQETTQSALTNATTEETPVTGEATTATNQANTPA 128
>PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2364 Score = 28.1 bits (61), Expect = 5.4 Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 6/91 (6%) Frame = +3 Query: 123 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 302 GS + G++S FG S P G G+TS G P+ +G +G T G S Sbjct: 1541 GSPDISGETSG-LFG-VSGQPSGFPDISGETSGLLEVSGQPSGFYGEISGVTELSGLASG 1598 Query: 303 TAGAFGQPS------APAFGATSTPAFGAAP 377 G+ S P FG T G AP Sbjct: 1599 QPEISGEASGILSGLGPPFGITDLS--GEAP 1627
>EPN2_RAT (Q9Z1Z3) Epsin-2 (EPS-15-interacting protein 2)| Length = 583 Score = 28.1 bits (61), Expect = 5.4 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Frame = +3 Query: 129 TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTAT-NPFGSPTTA-FGAQTGTTSPFGATSS 302 TNP+G + A A S+P+ + FG A+ +P+G PTTA + + P+ A+ Sbjct: 312 TNPWGGTVAPA---NISDPWPS---FGTKPAASVDPWGVPTTASIQSVPKNSDPWAASQQ 365 Query: 303 TAGAFGQPSAPAFGATS-TPAFGA 371 A G+ +A A+GA +PA G+ Sbjct: 366 PASDAGK-TADAWGAAKPSPASGS 388
>ZCH14_HUMAN (Q8WYQ9) Zinc finger CCHC domain-containing protein 14 (BDG-29)| Length = 949 Score = 27.7 bits (60), Expect = 7.0 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Frame = +3 Query: 159 AFGQTSSNPFGA-QSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAP 335 AF SS P G Q GF S +P P+T+F A T A SS+ P + Sbjct: 684 AFSAMSSMPVGPLQGGFCANSNTASPSSHPSTSF-ANMATLPSCPAPSSSPALSSVPESS 742 Query: 336 AFGAT 350 + ++ Sbjct: 743 FYSSS 747
>YES_XIPHE (P27447) Tyrosine-protein kinase Yes (EC 2.7.10.2) (p61-Yes)| Length = 543 Score = 27.7 bits (60), Expect = 7.0 Identities = 21/51 (41%), Positives = 28/51 (54%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 293 GQS A Q +S+P A S FG S+ PFG +T+F + T +PF A Sbjct: 40 GQSPAMKT-QNNSHPT-ALSPFGGVSSPMTPFGGASTSFTSVT-VNNPFPA 87
>VLPE_MYCHR (Q49537) Variant surface antigen E precursor (VLPE prolipoprotein)| Length = 243 Score = 27.7 bits (60), Expect = 7.0 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = +3 Query: 153 ASAFGQTSSNPFGAQ---SGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQ 323 A + GQT+ N +Q SG G S GS G+ +GTT+ G T+ + A G Sbjct: 27 AISCGQTTDNLSQSQQPGSGTGSGSGTNTENGSNN---GSGSGTTNSSGGTNQSGSASGN 83 Query: 324 PSAPAFGATSTP 359 S+ + + STP Sbjct: 84 GSSNS--SVSTP 93
>UBQL1_MOUSE (Q8R317) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) Length = 582 Score = 27.7 bits (60), Expect = 7.0 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQ-SGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 314 FG + ++ +SS+ G Q S NP+ T+ +GTT T ST+G Sbjct: 282 FGGNPFASLVSSSSSAEGTQPSRTENRDPLPNPWAPQTSQSSPASGTTGSTTNTMSTSGG 341 Query: 315 FGQPSAPAFGATSTPA 362 S PA +TS P+ Sbjct: 342 TA-TSTPAGQSTSGPS 356
>RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1853 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/87 (25%), Positives = 36/87 (41%) Frame = +3 Query: 120 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 299 + T+P ++ + TS S T T ++P +PT+ + SP T Sbjct: 1731 YSPTSPSYSPTSPQYSPTSPQ----YSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTY 1786 Query: 300 STAGAFGQPSAPAFGATSTPAFGAAPA 380 S PS+P + TS P + +PA Sbjct: 1787 SPTSPSYTPSSPQYSPTS-PTYTPSPA 1812
>RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1745 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 288 GATSSTAGAFGQPSAPAFGATSTPAF 365 GATS +G P++P FG S+P F Sbjct: 1520 GATSPFSGYGNGPTSPGFGDVSSPGF 1545
>P2RX1_RAT (P47824) P2X purinoceptor 1 (ATP receptor) (P2X1) (Purinergic| receptor) (RP-2 protein) Length = 399 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/52 (32%), Positives = 21/52 (40%) Frame = +3 Query: 165 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 320 G + NP G G Q + P + A G +TG PF T T FG Sbjct: 115 GHCAENPEG---GICQDDSGCTPGKAERKAQGIRTGNCVPFNGTVKTCEIFG 163
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 27.7 bits (60), Expect = 7.0 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 10/97 (10%) Frame = +3 Query: 120 FGSTNPFGQS----SASAFGQTSSNP------FGAQSGFGQTSTATNPFGSPTTAFGAQT 269 F +N FG+ +ASA + + P +G+Q+ FG P +P + Sbjct: 15 FIESNDFGEDPLIRAASAAEEGFTQPAAPDLLYGSQNMFGVDDA---PLSTPAVVIPPPS 71 Query: 270 GTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 P G + + PSA G TPA A PA Sbjct: 72 PAPEPRGGKAKRS-----PSAAGSGGPPTPAAAAQPA 103
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 27.7 bits (60), Expect = 7.0 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 10/97 (10%) Frame = +3 Query: 120 FGSTNPFGQS----SASAFGQTSSNP------FGAQSGFGQTSTATNPFGSPTTAFGAQT 269 F +N FG+ +ASA + + P +G+Q+ FG P +P + Sbjct: 15 FIESNDFGEDPLIRAASAAEEGFTQPAAPDLLYGSQNMFGVDDA---PLSTPVVVIPPPS 71 Query: 270 GTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 P G + + PSA G TPA A PA Sbjct: 72 PAPEPRGGKAKRS-----PSAAGSGGPPTPAAAAQPA 103
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 27.7 bits (60), Expect = 7.0 Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Frame = +3 Query: 225 TNPFGSPTTA-FGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPAG 383 T P G P A + G P G + ST GA G P P PA A P G Sbjct: 760 TGPIGPPGPAGANGEKGEAGPPGPSGST-GARGAPGEPGETGPPGPAGFAGPPG 812
>SPD2_NEPCL (P46804) Spidroin 2 (Dragline silk fibroin 2) (Fragment)| Length = 627 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 4/86 (4%) Frame = +3 Query: 138 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 317 +G SASA + G+G + GS + A A +G G + Sbjct: 347 YGPGSASAAAAAAGPGQQGPGGYGPGQQGPSGPGSASAAAAAAAAGPGGYGPGQQGPGGY 406 Query: 318 --GQ--PSAPAFGATSTPAFGAAPAG 383 GQ PS P + + A A P G Sbjct: 407 APGQQGPSGPGSASAAAAAAAAGPGG 432
>PYRD_PYRKO (Q5JHR7) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 302 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 250 VVGLPKGLVAVLVWPNPDWAPKGLLEV 170 +V LP GL+ + PNP W KG LE+ Sbjct: 62 IVELPYGLINAMGLPNPGW--KGFLEM 86
>GUX1_ASPAC (O59843) Exoglucanase 1 precursor (EC 3.2.1.91) (Exoglucanase I)| (Exocellobiohydrolase I) (1,4-beta-cellobiohydrolase I) (Beta-glucancellobiohydrolase I) Length = 540 Score = 27.7 bits (60), Expect = 7.0 Identities = 20/71 (28%), Positives = 33/71 (46%) Frame = +3 Query: 156 SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAP 335 S + TSS + S T +T+ S TT ++T TTS ++++ A +GQ Sbjct: 459 STYSGTSSGGSSSSSTTLTTKASTSTTSSKTTTTTSKTSTTS--SSSTNVAQLYGQCGGQ 516 Query: 336 AFGATSTPAFG 368 + +T A G Sbjct: 517 GWTGPTTCASG 527
>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)| Length = 220 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/58 (29%), Positives = 31/58 (53%) Frame = +3 Query: 141 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 314 G S+ ++ G +SSN G+ SG G S ++ S A + + S G++SS++ + Sbjct: 63 GSSAGNSSGSSSSNSSGS-SGIGSLSRNSSSSSSSQAAGSSSSRRVSADGSSSSSSAS 119
>MARCS_RAT (P30009) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (Protein kinase C substrate 80 kDa protein) Length = 308 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +3 Query: 243 PTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 P+ A G + +P GAT+ A + P A AT PA AAP+ Sbjct: 244 PSEAVGEKAEEPAP-GATADDAPSAAGPEQEAPAATDEPAASAAPS 288
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTA 254 S++ +G SS+S G SSN G SG+ S ++ +G+P+ + Sbjct: 585 SSSNWGGSSSSGGGWGSSNN-GGYSGYSGRSNGSSSYGNPSAS 626
>STK39_MOUSE (Q9Z1W9) STE20/SPS1-related proline-alanine-rich protein kinase (EC| 2.7.11.1) (Ste-20-related kinase) (Serine/threonine-protein kinase 39) Length = 556 Score = 27.7 bits (60), Expect = 7.0 Identities = 21/47 (44%), Positives = 24/47 (51%) Frame = +3 Query: 240 SPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPAFGATSTPAFGAAPA 380 +P TA A T+P ATS+ A A APA A PA AAPA Sbjct: 18 APVTAAAA----TAPAAATSAPAPA--PAPAPAASAAPAPAPAAAPA 58
>FRU_DROME (Q8IN81) Sex determination protein fruitless| Length = 955 Score = 27.7 bits (60), Expect = 7.0 Identities = 23/85 (27%), Positives = 40/85 (47%) Frame = +3 Query: 126 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 305 +T+P S+ + S GA +G G S + G+ +G+ + A+ +T Sbjct: 795 ATHPSHSQSSPHYPSAS----GAGAGAGSVSVSIA---------GSASGSATSAPASVAT 841 Query: 306 AGAFGQPSAPAFGATSTPAFGAAPA 380 + QPS+ + G+TS+ A AA A Sbjct: 842 SAVSPQPSSSSTGSTSSAAAVAAAA 866 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.135 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,158,042 Number of Sequences: 219361 Number of extensions: 759310 Number of successful extensions: 3733 Number of sequences better than 10.0: 295 Number of HSP's better than 10.0 without gapping: 2706 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3370 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
