ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1M3K9_HUMAN (P80192) Mitogen-activated protein kinase kinase kina... 31 0.71
2GPX42_MOUSE (Q91XR9) Phospholipid hydroperoxide glutathione pero... 29 3.5

>M3K9_HUMAN (P80192) Mitogen-activated protein kinase kinase kinase 9 (EC|
           2.7.11.25) (Mixed lineage kinase 1)
          Length = 1104

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 16  PPNSIASLPQFQPTLSAPAAGPEHCRCSIA 105
           P NS  S PQ  PT S    G  H RC +A
Sbjct: 723 PVNSATSTPQLTPTNSLKRGGAHHRRCEVA 752



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>GPX42_MOUSE (Q91XR9) Phospholipid hydroperoxide glutathione peroxidase, nuclear|
           (EC 1.11.1.12) (GPX-4)
          Length = 253

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = +2

Query: 188 RWRGRCGGRATSPRGRISRGSTRCGAR 268
           R RGRC  R  SPRGR  RG  R   R
Sbjct: 7   RKRGRCRQRGGSPRGRRRRGPGRQSPR 33


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,819,780
Number of Sequences: 219361
Number of extensions: 284917
Number of successful extensions: 1419
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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