Clone Information

BLAST Search Result

Clone Name	bastl43d09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_462832.1\| Oryza sativa (japonica cultivar-group), predic...	478	e-132
2	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	478	e-132
3	dbj\|AP003103.2\| Oryza sativa (japonica cultivar-group) genomic D...	478	e-132
4	dbj\|AP002862.2\| Oryza sativa (japonica cultivar-group) genomic D...	478	e-132
5	gb\|AC120539.4\| Oryza sativa (japonica cultivar-group) chromosome...	375	e-101
6	gb\|AC123897.3\| Oryza sativa (japonica cultivar-group) chromosome...	375	e-101
7	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	375	e-101
8	dbj\|AK072825.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	375	e-101
9	dbj\|AK069716.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	375	e-101
10	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	375	e-101
11	dbj\|AK120719.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	367	2e-98
12	dbj\|AK120713.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	367	2e-98
13	dbj\|AB080596.1\| Botryococcus braunii bCOP mRNA for coatomer subu...	100	8e-18
14	ref\|XM_323756.1\| Neurospora crassa OR74A hypothetical protein (N...	44	0.40
15	ref\|XM_952388.1\| Neurospora crassa OR74A hypothetical protein (N...	44	0.40
16	ref\|XM_956946.1\| Neurospora crassa OR74A hypothetical protein (N...	44	0.40
17	ref\|XM_330944.1\| Neurospora crassa OR74A hypothetical protein (N...	44	0.40
18	ref\|XM_754415.1\| Ustilago maydis 521 hypothetical protein (UM033...	44	0.40
19	emb\|X80052.1\|NCFOX2 N.crassa fox-2 gene	44	0.40
20	emb\|BX908809.1\| Neurospora crassa DNA linkage group IV Cosmid co...	44	0.40
21	ref\|XM_544073.2\| PREDICTED: Canis familiaris similar to CG12002-...	42	1.6
22	ref\|XM_505605.1\| Yarrowia lipolytica CLIB122, YALI0F19074g predi...	42	1.6
23	gb\|AE005990.1\| Caulobacter crescentus CB15 section 316 of 359 of...	42	1.6
24	ref\|XM_693623.1\| PREDICTED: Danio rerio similar to CG12002-PA, i...	42	1.6
25	ref\|XM_571941.1\| Cryptococcus neoformans var. neoformans JEC21 c...	42	1.6
26	emb\|BX649351.10\| Zebrafish DNA sequence from clone CH211-168F19 ...	42	1.6
27	gb\|AE015451.1\| Pseudomonas putida KT2440 complete genome	42	1.6
28	emb\|CR382132.1\| Yarrowia lipolytica chromosome F of strain CLIB1...	42	1.6
29	gb\|CP000112.1\| Desulfovibrio desulfuricans G20, complete genome	40	6.3
30	ref\|XM_463570.1\| Oryza sativa (japonica cultivar-group), predic...	40	6.3
31	gb\|AE017347.1\| Cryptococcus neoformans var. neoformans JEC21 chr...	40	6.3
32	gb\|AY372423.1\| Medicago truncatula B gene, partial sequence	40	6.3
33	gb\|CP000316.1\| Polaromonas sp. JS666, complete genome	40	6.3
34	emb\|CR925828.3\| Zebrafish DNA sequence from clone DKEY-156K7 in ...	40	6.3
35	emb\|CR936945.2\| Medicago truncatula chromosome 5 clone mte1-67e6...	40	6.3
36	dbj\|AP008229.1\| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c...	40	6.3
37	gb\|AE005768.1\| Caulobacter crescentus CB15 section 94 of 359 of ...	40	6.3
38	gb\|CP000264.1\| Jannaschia sp. CCS1, complete genome	40	6.3
39	gb\|AF229199.1\|AF229199 Oryza sativa chromosome 1 clone OSJNBa004...	40	6.3
40	dbj\|BA000030.2\| Streptomyces avermitilis MA-4680 genomic DNA, co...	40	6.3
41	dbj\|AP003346.4\| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
42	dbj\|AP003379.2\| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
43	dbj\|BA000040.2\| Bradyrhizobium japonicum USDA 110 DNA, complete ...	40	6.3
44	gb\|AE013598.1\| Xanthomonas oryzae pv. oryzae KACC10331, complete...	40	6.3
45	gb\|AE016825.1\| Chromobacterium violaceum ATCC 12472, complete ge...	40	6.3
46	gb\|AE016958.1\| Mycobacterium avium subsp. paratuberculosis str. ...	40	6.3
47	gb\|AC157784.2\| Mus musculus chromosome 18, clone RP24-163C18, co...	40	6.3

>ref|XM_462832.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3111

 Score =  478 bits (241), Expect = e-132
 Identities = 364/405 (89%)
 Strand = Plus / Plus

                                                                       
Query: 61  ccggcgccatggacaagccgtcgacgctgcttgtccacttcgacaagggctccgccgcca 120
           ||||||||||||| ||||||   |||||||| ||||||||||||||||||||||||||||
Sbjct: 251 ccggcgccatggagaagccgagcacgctgctggtccacttcgacaagggctccgccgcca 310

                                                                       
Query: 121 tggtgaactagatcaaggcggatctggagggcagcgacgtcgccgccaaggtcgaggcca 180
           |||      |||||||||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 311 tggccggtgagatcaaggcggatctcgagggcagcgacgtggccgccaaggtggacgcca 370

                                                                       
Query: 181 tgaagcgcgccgtcatgctcctcctcaatggcgagacactgcctacgctcttcatcacca 240
           |||||||||||||||||||||||||||| |||||||| || || || |||||||||||| 
Sbjct: 371 tgaagcgcgccgtcatgctcctcctcaacggcgagaccctccccaccctcttcatcaccg 430

                                                                       
Query: 241 tcgtccgctacgtcctcccttccgaggatcacaccattcagaagctgctgctcctctacc 300
           ||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 431 tcgtccgctacgtcctcccctccgaggaccacaccatccagaagctgctcctcctctacc 490

                                                                       
Query: 301 tcgagatcattgacaagcgcaacgccgccggccgcgttctcccggagatgatcctcatct 360
           |||||||||| ||||||||| ||||||||||| | |  ||||||||||||||||||||||
Sbjct: 491 tcgagatcatcgacaagcgcgacgccgccggcaggggcctcccggagatgatcctcatct 550

                                                                       
Query: 361 gccaggaccttcgcaacaacctgcagcaccccaacgagtacatccgcggcgtcacgctgc 420
           ||||| |||| ||||||||||| || ||||||||||||||||||||||||||||| || |
Sbjct: 551 gccagaacctccgcaacaacctccaccaccccaacgagtacatccgcggcgtcaccctcc 610

                                                        
Query: 421 ggttcctctgccgcctctccgagctggaggtgcttgagccgctcg 465
           | ||||||||||||||||||||||  |||||||| ||||||||||
Sbjct: 611 gcttcctctgccgcctctccgagcccgaggtgctcgagccgctcg 655

to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  478 bits (241), Expect = e-132
 Identities = 364/405 (89%)
 Strand = Plus / Minus

                                                                            
Query: 61       ccggcgccatggacaagccgtcgacgctgcttgtccacttcgacaagggctccgccgcca 120
                ||||||||||||| ||||||   |||||||| ||||||||||||||||||||||||||||
Sbjct: 10025973 ccggcgccatggagaagccgagcacgctgctggtccacttcgacaagggctccgccgcca 10025914

                                                                            
Query: 121      tggtgaactagatcaaggcggatctggagggcagcgacgtcgccgccaaggtcgaggcca 180
                |||      |||||||||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 10025913 tggccggtgagatcaaggcggatctcgagggcagcgacgtggccgccaaggtggacgcca 10025854

                                                                            
Query: 181      tgaagcgcgccgtcatgctcctcctcaatggcgagacactgcctacgctcttcatcacca 240
                |||||||||||||||||||||||||||| |||||||| || || || |||||||||||| 
Sbjct: 10025853 tgaagcgcgccgtcatgctcctcctcaacggcgagaccctccccaccctcttcatcaccg 10025794

                                                                            
Query: 241      tcgtccgctacgtcctcccttccgaggatcacaccattcagaagctgctgctcctctacc 300
                ||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 10025793 tcgtccgctacgtcctcccctccgaggaccacaccatccagaagctgctcctcctctacc 10025734

                                                                            
Query: 301      tcgagatcattgacaagcgcaacgccgccggccgcgttctcccggagatgatcctcatct 360
                |||||||||| ||||||||| ||||||||||| | |  ||||||||||||||||||||||
Sbjct: 10025733 tcgagatcatcgacaagcgcgacgccgccggcaggggcctcccggagatgatcctcatct 10025674

                                                                            
Query: 361      gccaggaccttcgcaacaacctgcagcaccccaacgagtacatccgcggcgtcacgctgc 420
                ||||| |||| ||||||||||| || ||||||||||||||||||||||||||||| || |
Sbjct: 10025673 gccagaacctccgcaacaacctccaccaccccaacgagtacatccgcggcgtcaccctcc 10025614

                                                             
Query: 421      ggttcctctgccgcctctccgagctggaggtgcttgagccgctcg 465
                | ||||||||||||||||||||||  |||||||| ||||||||||
Sbjct: 10025613 gcttcctctgccgcctctccgagcccgaggtgctcgagccgctcg 10025569



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 127      actagatcaaggcggatctggagg 150
                |||||||| |||||||||||||||
Sbjct: 38534541 actagatccaggcggatctggagg 38534518

to top

>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F09
          Length = 132713

 Score =  478 bits (241), Expect = e-132
 Identities = 364/405 (89%)
 Strand = Plus / Minus

                                                                          
Query: 61     ccggcgccatggacaagccgtcgacgctgcttgtccacttcgacaagggctccgccgcca 120
              ||||||||||||| ||||||   |||||||| ||||||||||||||||||||||||||||
Sbjct: 106255 ccggcgccatggagaagccgagcacgctgctggtccacttcgacaagggctccgccgcca 106196

                                                                          
Query: 121    tggtgaactagatcaaggcggatctggagggcagcgacgtcgccgccaaggtcgaggcca 180
              |||      |||||||||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 106195 tggccggtgagatcaaggcggatctcgagggcagcgacgtggccgccaaggtggacgcca 106136

                                                                          
Query: 181    tgaagcgcgccgtcatgctcctcctcaatggcgagacactgcctacgctcttcatcacca 240
              |||||||||||||||||||||||||||| |||||||| || || || |||||||||||| 
Sbjct: 106135 tgaagcgcgccgtcatgctcctcctcaacggcgagaccctccccaccctcttcatcaccg 106076

                                                                          
Query: 241    tcgtccgctacgtcctcccttccgaggatcacaccattcagaagctgctgctcctctacc 300
              ||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 106075 tcgtccgctacgtcctcccctccgaggaccacaccatccagaagctgctcctcctctacc 106016

                                                                          
Query: 301    tcgagatcattgacaagcgcaacgccgccggccgcgttctcccggagatgatcctcatct 360
              |||||||||| ||||||||| ||||||||||| | |  ||||||||||||||||||||||
Sbjct: 106015 tcgagatcatcgacaagcgcgacgccgccggcaggggcctcccggagatgatcctcatct 105956

                                                                          
Query: 361    gccaggaccttcgcaacaacctgcagcaccccaacgagtacatccgcggcgtcacgctgc 420
              ||||| |||| ||||||||||| || ||||||||||||||||||||||||||||| || |
Sbjct: 105955 gccagaacctccgcaacaacctccaccaccccaacgagtacatccgcggcgtcaccctcc 105896

                                                           
Query: 421    ggttcctctgccgcctctccgagctggaggtgcttgagccgctcg 465
              | ||||||||||||||||||||||  |||||||| ||||||||||
Sbjct: 105895 gcttcctctgccgcctctccgagcccgaggtgctcgagccgctcg 105851

to top

>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0036E02
          Length = 145931

 Score =  478 bits (241), Expect = e-132
 Identities = 364/405 (89%)
 Strand = Plus / Minus

                                                                          
Query: 61     ccggcgccatggacaagccgtcgacgctgcttgtccacttcgacaagggctccgccgcca 120
              ||||||||||||| ||||||   |||||||| ||||||||||||||||||||||||||||
Sbjct: 120466 ccggcgccatggagaagccgagcacgctgctggtccacttcgacaagggctccgccgcca 120407

                                                                          
Query: 121    tggtgaactagatcaaggcggatctggagggcagcgacgtcgccgccaaggtcgaggcca 180
              |||      |||||||||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 120406 tggccggtgagatcaaggcggatctcgagggcagcgacgtggccgccaaggtggacgcca 120347

                                                                          
Query: 181    tgaagcgcgccgtcatgctcctcctcaatggcgagacactgcctacgctcttcatcacca 240
              |||||||||||||||||||||||||||| |||||||| || || || |||||||||||| 
Sbjct: 120346 tgaagcgcgccgtcatgctcctcctcaacggcgagaccctccccaccctcttcatcaccg 120287

                                                                          
Query: 241    tcgtccgctacgtcctcccttccgaggatcacaccattcagaagctgctgctcctctacc 300
              ||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 120286 tcgtccgctacgtcctcccctccgaggaccacaccatccagaagctgctcctcctctacc 120227

                                                                          
Query: 301    tcgagatcattgacaagcgcaacgccgccggccgcgttctcccggagatgatcctcatct 360
              |||||||||| ||||||||| ||||||||||| | |  ||||||||||||||||||||||
Sbjct: 120226 tcgagatcatcgacaagcgcgacgccgccggcaggggcctcccggagatgatcctcatct 120167

                                                                          
Query: 361    gccaggaccttcgcaacaacctgcagcaccccaacgagtacatccgcggcgtcacgctgc 420
              ||||| |||| ||||||||||| || ||||||||||||||||||||||||||||| || |
Sbjct: 120166 gccagaacctccgcaacaacctccaccaccccaacgagtacatccgcggcgtcaccctcc 120107

                                                           
Query: 421    ggttcctctgccgcctctccgagctggaggtgcttgagccgctcg 465
              | ||||||||||||||||||||||  |||||||| ||||||||||
Sbjct: 120106 gcttcctctgccgcctctccgagcccgaggtgctcgagccgctcg 120062

to top

>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score =  375 bits (189), Expect = e-101
 Identities = 329/375 (87%), Gaps = 3/375 (0%)
 Strand = Plus / Minus

                                                                         
Query: 93    gtccacttcgacaagggctccgccgccatggtgaactagatcaaggcggatctggagggc 152
             ||||||||||||||||||||| || ||||||  ||| |||||||||| || || ||||||
Sbjct: 21405 gtccacttcgacaagggctccccctccatggccaacgagatcaaggccgacctcgagggc 21346

                                                                         
Query: 153   agcgacgtcgccgccaaggtcgaggccatgaagcgcgccgtcatgctcctcctcaatggc 212
             ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||
Sbjct: 21345 agcgacgtcgccgccaaggtcgacgccatgaagcgcgccatcatgctgctcctcaacggc 21286

                                                                         
Query: 213   gagacactgcctacgctcttcatcaccatcgtccgctacgtcctcccttccgaggatcac 272
             ||||| || ||    |||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct: 21285 gagaccctcccccacctcttcatcaccgtcgtccgctacgtcctcccctccgaggaccac 21226

                                                                         
Query: 273   accattcagaagctgctgctcctctacctcgagatcattgacaagcgcaa---cgccgcc 329
             ||||| |||||||| || |||||||||||||||||| | ||||||||| |   |||| ||
Sbjct: 21225 accatccagaagctcctcctcctctacctcgagatcgtcgacaagcgcgacgtcgcctcc 21166

                                                                         
Query: 330   ggccgcgttctcccggagatgatcctcatctgccaggaccttcgcaacaacctgcagcac 389
             |||   || ||||||||||||||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 21165 ggcaaggtactcccggagatgatcctcatctgccagaacctccgcaacaacctccagcac 21106

                                                                         
Query: 390   cccaacgagtacatccgcggcgtcacgctgcggttcctctgccgcctctccgagctggag 449
             |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||  |||
Sbjct: 21105 cccaacgagtacatccgcggggtcacgctgcgcttcctctgccgcctcaacgagcccgag 21046

                            
Query: 450   gtgcttgagccgctc 464
              |||| |||||||||
Sbjct: 21045 ctgctcgagccgctc 21031

to top

>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24
              map S20116S, complete sequence
          Length = 174210

 Score =  375 bits (189), Expect = e-101
 Identities = 329/375 (87%), Gaps = 3/375 (0%)
 Strand = Plus / Minus

                                                                          
Query: 93     gtccacttcgacaagggctccgccgccatggtgaactagatcaaggcggatctggagggc 152
              ||||||||||||||||||||| || ||||||  ||| |||||||||| || || ||||||
Sbjct: 170870 gtccacttcgacaagggctccccctccatggccaacgagatcaaggccgacctcgagggc 170811

                                                                          
Query: 153    agcgacgtcgccgccaaggtcgaggccatgaagcgcgccgtcatgctcctcctcaatggc 212
              ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||
Sbjct: 170810 agcgacgtcgccgccaaggtcgacgccatgaagcgcgccatcatgctgctcctcaacggc 170751

                                                                          
Query: 213    gagacactgcctacgctcttcatcaccatcgtccgctacgtcctcccttccgaggatcac 272
              ||||| || ||    |||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct: 170750 gagaccctcccccacctcttcatcaccgtcgtccgctacgtcctcccctccgaggaccac 170691

                                                                          
Query: 273    accattcagaagctgctgctcctctacctcgagatcattgacaagcgcaa---cgccgcc 329
              ||||| |||||||| || |||||||||||||||||| | ||||||||| |   |||| ||
Sbjct: 170690 accatccagaagctcctcctcctctacctcgagatcgtcgacaagcgcgacgtcgcctcc 170631

                                                                          
Query: 330    ggccgcgttctcccggagatgatcctcatctgccaggaccttcgcaacaacctgcagcac 389
              |||   || ||||||||||||||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 170630 ggcaaggtactcccggagatgatcctcatctgccagaacctccgcaacaacctccagcac 170571

                                                                          
Query: 390    cccaacgagtacatccgcggcgtcacgctgcggttcctctgccgcctctccgagctggag 449
              |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||  |||
Sbjct: 170570 cccaacgagtacatccgcggggtcacgctgcgcttcctctgccgcctcaacgagcccgag 170511

                             
Query: 450    gtgcttgagccgctc 464
               |||| |||||||||
Sbjct: 170510 ctgctcgagccgctc 170496

to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  375 bits (189), Expect = e-101
 Identities = 329/375 (87%), Gaps = 3/375 (0%)
 Strand = Plus / Minus

                                                                           
Query: 93      gtccacttcgacaagggctccgccgccatggtgaactagatcaaggcggatctggagggc 152
               ||||||||||||||||||||| || ||||||  ||| |||||||||| || || ||||||
Sbjct: 3653733 gtccacttcgacaagggctccccctccatggccaacgagatcaaggccgacctcgagggc 3653674

                                                                           
Query: 153     agcgacgtcgccgccaaggtcgaggccatgaagcgcgccgtcatgctcctcctcaatggc 212
               ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||
Sbjct: 3653673 agcgacgtcgccgccaaggtcgacgccatgaagcgcgccatcatgctgctcctcaacggc 3653614

                                                                           
Query: 213     gagacactgcctacgctcttcatcaccatcgtccgctacgtcctcccttccgaggatcac 272
               ||||| || ||    |||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct: 3653613 gagaccctcccccacctcttcatcaccgtcgtccgctacgtcctcccctccgaggaccac 3653554

                                                                           
Query: 273     accattcagaagctgctgctcctctacctcgagatcattgacaagcgcaa---cgccgcc 329
               ||||| |||||||| || |||||||||||||||||| | ||||||||| |   |||| ||
Sbjct: 3653553 accatccagaagctcctcctcctctacctcgagatcgtcgacaagcgcgacgtcgcctcc 3653494

                                                                           
Query: 330     ggccgcgttctcccggagatgatcctcatctgccaggaccttcgcaacaacctgcagcac 389
               |||   || ||||||||||||||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 3653493 ggcaaggtactcccggagatgatcctcatctgccagaacctccgcaacaacctccagcac 3653434

                                                                           
Query: 390     cccaacgagtacatccgcggcgtcacgctgcggttcctctgccgcctctccgagctggag 449
               |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||  |||
Sbjct: 3653433 cccaacgagtacatccgcggggtcacgctgcgcttcctctgccgcctcaacgagcccgag 3653374

                              
Query: 450     gtgcttgagccgctc 464
                |||| |||||||||
Sbjct: 3653373 ctgctcgagccgctc 3653359

to top

>dbj|AK072825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136B14, full
           insert sequence
          Length = 1667

 Score =  375 bits (189), Expect = e-101
 Identities = 329/375 (87%), Gaps = 3/375 (0%)
 Strand = Plus / Plus

                                                                       
Query: 93  gtccacttcgacaagggctccgccgccatggtgaactagatcaaggcggatctggagggc 152
           ||||||||||||||||||||| || ||||||  ||| |||||||||| || || ||||||
Sbjct: 102 gtccacttcgacaagggctccccctccatggccaacgagatcaaggccgacctcgagggc 161

                                                                       
Query: 153 agcgacgtcgccgccaaggtcgaggccatgaagcgcgccgtcatgctcctcctcaatggc 212
           ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||
Sbjct: 162 agcgacgtcgccgccaaggtcgacgccatgaagcgcgccatcatgctgctcctcaacggc 221

                                                                       
Query: 213 gagacactgcctacgctcttcatcaccatcgtccgctacgtcctcccttccgaggatcac 272
           ||||| || ||    |||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct: 222 gagaccctcccccacctcttcatcaccgtcgtccgctacgtcctcccctccgaggaccac 281

                                                                       
Query: 273 accattcagaagctgctgctcctctacctcgagatcattgacaagcgcaa---cgccgcc 329
           ||||| |||||||| || |||||||||||||||||| | ||||||||| |   |||| ||
Sbjct: 282 accatccagaagctcctcctcctctacctcgagatcgtcgacaagcgcgacgtcgcctcc 341

                                                                       
Query: 330 ggccgcgttctcccggagatgatcctcatctgccaggaccttcgcaacaacctgcagcac 389
           |||   || ||||||||||||||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 342 ggcaaggtactcccggagatgatcctcatctgccagaacctccgcaacaacctccagcac 401

                                                                       
Query: 390 cccaacgagtacatccgcggcgtcacgctgcggttcctctgccgcctctccgagctggag 449
           |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||  |||
Sbjct: 402 cccaacgagtacatccgcggggtcacgctgcgcttcctctgccgcctcaacgagcccgag 461

                          
Query: 450 gtgcttgagccgctc 464
            |||| |||||||||
Sbjct: 462 ctgctcgagccgctc 476

to top

>dbj|AK069716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F21, full
           insert sequence
          Length = 3363

 Score =  375 bits (189), Expect = e-101
 Identities = 329/375 (87%), Gaps = 3/375 (0%)
 Strand = Plus / Plus

                                                                       
Query: 93  gtccacttcgacaagggctccgccgccatggtgaactagatcaaggcggatctggagggc 152
           ||||||||||||||||||||| || ||||||  ||| |||||||||| || || ||||||
Sbjct: 169 gtccacttcgacaagggctccccctccatggccaacgagatcaaggccgacctcgagggc 228

                                                                       
Query: 153 agcgacgtcgccgccaaggtcgaggccatgaagcgcgccgtcatgctcctcctcaatggc 212
           ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||
Sbjct: 229 agcgacgtcgccgccaaggtcgacgccatgaagcgcgccatcatgctgctcctcaacggc 288

                                                                       
Query: 213 gagacactgcctacgctcttcatcaccatcgtccgctacgtcctcccttccgaggatcac 272
           ||||| || ||    |||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct: 289 gagaccctcccccacctcttcatcaccgtcgtccgctacgtcctcccctccgaggaccac 348

                                                                       
Query: 273 accattcagaagctgctgctcctctacctcgagatcattgacaagcgcaa---cgccgcc 329
           ||||| |||||||| || |||||||||||||||||| | ||||||||| |   |||| ||
Sbjct: 349 accatccagaagctcctcctcctctacctcgagatcgtcgacaagcgcgacgtcgcctcc 408

                                                                       
Query: 330 ggccgcgttctcccggagatgatcctcatctgccaggaccttcgcaacaacctgcagcac 389
           |||   || ||||||||||||||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 409 ggcaaggtactcccggagatgatcctcatctgccagaacctccgcaacaacctccagcac 468

                                                                       
Query: 390 cccaacgagtacatccgcggcgtcacgctgcggttcctctgccgcctctccgagctggag 449
           |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||  |||
Sbjct: 469 cccaacgagtacatccgcggggtcacgctgcgcttcctctgccgcctcaacgagcccgag 528

                          
Query: 450 gtgcttgagccgctc 464
            |||| |||||||||
Sbjct: 529 ctgctcgagccgctc 543

to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  375 bits (189), Expect = e-101
 Identities = 329/375 (87%), Gaps = 3/375 (0%)
 Strand = Plus / Minus

                                                                           
Query: 93      gtccacttcgacaagggctccgccgccatggtgaactagatcaaggcggatctggagggc 152
               ||||||||||||||||||||| || ||||||  ||| |||||||||| || || ||||||
Sbjct: 3662427 gtccacttcgacaagggctccccctccatggccaacgagatcaaggccgacctcgagggc 3662368

                                                                           
Query: 153     agcgacgtcgccgccaaggtcgaggccatgaagcgcgccgtcatgctcctcctcaatggc 212
               ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||
Sbjct: 3662367 agcgacgtcgccgccaaggtcgacgccatgaagcgcgccatcatgctgctcctcaacggc 3662308

                                                                           
Query: 213     gagacactgcctacgctcttcatcaccatcgtccgctacgtcctcccttccgaggatcac 272
               ||||| || ||    |||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct: 3662307 gagaccctcccccacctcttcatcaccgtcgtccgctacgtcctcccctccgaggaccac 3662248

                                                                           
Query: 273     accattcagaagctgctgctcctctacctcgagatcattgacaagcgcaa---cgccgcc 329
               ||||| |||||||| || |||||||||||||||||| | ||||||||| |   |||| ||
Sbjct: 3662247 accatccagaagctcctcctcctctacctcgagatcgtcgacaagcgcgacgtcgcctcc 3662188

                                                                           
Query: 330     ggccgcgttctcccggagatgatcctcatctgccaggaccttcgcaacaacctgcagcac 389
               |||   || ||||||||||||||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 3662187 ggcaaggtactcccggagatgatcctcatctgccagaacctccgcaacaacctccagcac 3662128

                                                                           
Query: 390     cccaacgagtacatccgcggcgtcacgctgcggttcctctgccgcctctccgagctggag 449
               |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||  |||
Sbjct: 3662127 cccaacgagtacatccgcggggtcacgctgcgcttcctctgccgcctcaacgagcccgag 3662068

                              
Query: 450     gtgcttgagccgctc 464
                |||| |||||||||
Sbjct: 3662067 ctgctcgagccgctc 3662053

to top

>dbj|AK120719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G07, full
           insert sequence
          Length = 3332

 Score =  367 bits (185), Expect = 2e-98
 Identities = 328/375 (87%), Gaps = 3/375 (0%)
 Strand = Plus / Plus

                                                                       
Query: 93  gtccacttcgacaagggctccgccgccatggtgaactagatcaaggcggatctggagggc 152
           ||||||||||||||||||||| || ||||||  ||| |||||||||| || || ||||||
Sbjct: 138 gtccacttcgacaagggctccccctccatggccaacgagatcaaggccgacctcgagggc 197

                                                                       
Query: 153 agcgacgtcgccgccaaggtcgaggccatgaagcgcgccgtcatgctcctcctcaatggc 212
           ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||
Sbjct: 198 agcgacgtcgccgccaaggtcgacgccatgaagcgcgccatcatgctgctcctcaacggc 257

                                                                       
Query: 213 gagacactgcctacgctcttcatcaccatcgtccgctacgtcctcccttccgaggatcac 272
           ||||| || ||    |||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct: 258 gagaccctcccccacctcttcatcaccgtcgtccgctacgtcctcccctccgaggaccac 317

                                                                       
Query: 273 accattcagaagctgctgctcctctacctcgagatcattgacaagcgcaa---cgccgcc 329
           ||||| |||||||| || |||||||||||||||||| | ||||||||| |   |||| ||
Sbjct: 318 accatccagaagctcctcctcctctacctcgagatcgtcgacaagcgcgacgtcgcctcc 377

                                                                       
Query: 330 ggccgcgttctcccggagatgatcctcatctgccaggaccttcgcaacaacctgcagcac 389
           |||   || ||||||||||||||||||||||||| | |||| ||||||||||| ||||||
Sbjct: 378 ggcaaggtactcccggagatgatcctcatctgcctgaacctccgcaacaacctccagcac 437

                                                                       
Query: 390 cccaacgagtacatccgcggcgtcacgctgcggttcctctgccgcctctccgagctggag 449
           |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||  |||
Sbjct: 438 cccaacgagtacatccgcggggtcacgctgcgcttcctctgccgcctcaacgagcccgag 497

                          
Query: 450 gtgcttgagccgctc 464
            |||| |||||||||
Sbjct: 498 ctgctcgagccgctc 512

to top

>dbj|AK120713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002A09, full
           insert sequence
          Length = 3332

 Score =  367 bits (185), Expect = 2e-98
 Identities = 328/375 (87%), Gaps = 3/375 (0%)
 Strand = Plus / Plus

                                                                       
Query: 93  gtccacttcgacaagggctccgccgccatggtgaactagatcaaggcggatctggagggc 152
           ||||||||||||||||||||| || ||||||  ||| |||||||||| || || ||||||
Sbjct: 138 gtccacttcgacaagggctccccctccatggccaacgagatcaaggccgacctcgagggc 197

                                                                       
Query: 153 agcgacgtcgccgccaaggtcgaggccatgaagcgcgccgtcatgctcctcctcaatggc 212
           ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||
Sbjct: 198 agcgacgtcgccgccaaggtcgacgccatgaagcgcgccatcatgctgctcctcaacggc 257

                                                                       
Query: 213 gagacactgcctacgctcttcatcaccatcgtccgctacgtcctcccttccgaggatcac 272
           ||||| || ||    |||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct: 258 gagaccctcccccacctcttcatcaccgtcgtccgctacgtcctcccctccgaggaccac 317

                                                                       
Query: 273 accattcagaagctgctgctcctctacctcgagatcattgacaagcgcaa---cgccgcc 329
           ||||| |||||||| || |||||||||||||||||| | ||||||||| |   |||| ||
Sbjct: 318 accatccagaagctcctcctcctctacctcgagatcgtcgacaagcgcgacgtcgcctcc 377

                                                                       
Query: 330 ggccgcgttctcccggagatgatcctcatctgccaggaccttcgcaacaacctgcagcac 389
           |||   || ||||||||||||||||||||||||| | |||| ||||||||||| ||||||
Sbjct: 378 ggcaaggtactcccggagatgatcctcatctgcctgaacctccgcaacaacctccagcac 437

                                                                       
Query: 390 cccaacgagtacatccgcggcgtcacgctgcggttcctctgccgcctctccgagctggag 449
           |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||  |||
Sbjct: 438 cccaacgagtacatccgcggggtcacgctgcgcttcctctgccgcctcaacgagcccgag 497

                          
Query: 450 gtgcttgagccgctc 464
            |||| |||||||||
Sbjct: 498 ctgctcgagccgctc 512

to top

>dbj|AB080596.1| Botryococcus braunii bCOP mRNA for coatomer subunit beta, complete
           cds
          Length = 3313

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                       
Query: 345 gagatgatcctcatctgccaggaccttcgcaacaacctgcagcaccccaacgagtacatc 404
           |||||||| || || |||||| |||| |||||||||||||||||||| ||||||||||||
Sbjct: 484 gagatgattctgatttgccagaacctgcgcaacaacctgcagcacccgaacgagtacatc 543

                                         
Query: 405 cgcggcgtcacgctgcggttcctctgccgc 434
           || || ||||||||||| ||||| ||||||
Sbjct: 544 cggggggtcacgctgcgcttcctgtgccgc 573

to top

>ref|XM_323756.1| Neurospora crassa OR74A hypothetical protein (NCU04404.1) partial
           mRNA
          Length = 2874

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 382 tgcagcaccccaacgagtacatccgcggcgtcacgctgcggttcct 427
           |||| ||||| |||||||||||||| |||  ||||||||| |||||
Sbjct: 323 tgcaacacccgaacgagtacatccgaggcaacacgctgcgcttcct 368

to top

>ref|XM_952388.1| Neurospora crassa OR74A hypothetical protein (NCU04404.1) partial
           mRNA
          Length = 2874

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 382 tgcagcaccccaacgagtacatccgcggcgtcacgctgcggttcct 427
           |||| ||||| |||||||||||||| |||  ||||||||| |||||
Sbjct: 323 tgcaacacccgaacgagtacatccgaggcaacacgctgcgcttcct 368

to top

>ref|XM_956946.1| Neurospora crassa OR74A hypothetical protein (NCU08828.1) partial
            mRNA
          Length = 2685

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 100  tcgacaagggctccgccgccat 121
            ||||||||||||||||||||||
Sbjct: 2162 tcgacaagggctccgccgccat 2183

to top

>ref|XM_330944.1| Neurospora crassa OR74A hypothetical protein (NCU08828.1) partial
            mRNA
          Length = 2685

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 100  tcgacaagggctccgccgccat 121
            ||||||||||||||||||||||
Sbjct: 2162 tcgacaagggctccgccgccat 2183

to top

>ref|XM_754415.1| Ustilago maydis 521 hypothetical protein (UM03361.1) partial mRNA
          Length = 2949

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 382 tgcagcaccccaacgagtacat 403
           ||||||||||||||||||||||
Sbjct: 332 tgcagcaccccaacgagtacat 353

to top

>emb|X80052.1|NCFOX2 N.crassa fox-2 gene
          Length = 3401

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 100  tcgacaagggctccgccgccat 121
            ||||||||||||||||||||||
Sbjct: 2665 tcgacaagggctccgccgccat 2686

to top

>emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid contig 29E8
          Length = 197698

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 382   tgcagcaccccaacgagtacatccgcggcgtcacgctgcggttcct 427
             |||| ||||| |||||||||||||| |||  ||||||||| |||||
Sbjct: 18647 tgcaacacccgaacgagtacatccgaggcaacacgctgcgcttcct 18692

to top

>ref|XM_544073.2| PREDICTED: Canis familiaris similar to CG12002-PA, isoform A
            (LOC486944), mRNA
          Length = 3891

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 373  gcaacaacctgcagcacccca 393
            |||||||||||||||||||||
Sbjct: 1685 gcaacaacctgcagcacccca 1705

to top

>ref|XM_505605.1| Yarrowia lipolytica CLIB122, YALI0F19074g predicted mRNA
          Length = 2859

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 379 acctgcagcaccccaacgagtacat 403
           ||||||||||||| |||||||||||
Sbjct: 314 acctgcagcaccctaacgagtacat 338

to top

>gb|AE005990.1| Caulobacter crescentus CB15 section 316 of 359 of the complete
           genome
          Length = 10324

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 139 cggatctggagggcagcgacgtcgccgcc 167
           |||||||| ||||| ||||||||||||||
Sbjct: 542 cggatctgcagggcggcgacgtcgccgcc 514



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 144 ctggagggcagcgacgtcgccgcc 167
           ||||||||| ||||||||||||||
Sbjct: 508 ctggagggcggcgacgtcgccgcc 531

to top

>ref|XM_693623.1| PREDICTED: Danio rerio similar to CG12002-PA, isoform A
           (LOC570177), mRNA
          Length = 2301

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 373 gcaacaacctgcagcacccca 393
           |||||||||||||||||||||
Sbjct: 146 gcaacaacctgcagcacccca 166

to top

>ref|XM_571941.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 2933

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 381 ctgcagcaccccaacgagtacatccgcgg 409
           ||||| || ||||||||||||||||||||
Sbjct: 322 ctgcaacatcccaacgagtacatccgcgg 350

to top

>emb|BX649351.10| Zebrafish DNA sequence from clone CH211-168F19 in linkage group 4,
              complete sequence
          Length = 144569

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 282    aagctgctgctcctctacctcgaga 306
              |||||||||||||||||| ||||||
Sbjct: 106154 aagctgctgctcctctacatcgaga 106130

to top

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 160     tcgccgccaaggtcgaggcca 180
               |||||||||||||||||||||
Sbjct: 4038174 tcgccgccaaggtcgaggcca 4038194

to top

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 379     acctgcagcaccccaacgagtacat 403
               ||||||||||||| |||||||||||
Sbjct: 2553906 acctgcagcaccctaacgagtacat 2553882

to top

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     caagcgcaacgccgccggcc 333
               ||||||||||||||||||||
Sbjct: 3200120 caagcgcaacgccgccggcc 3200101

to top

>ref|XM_463570.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 127 actagatcaaggcggatctggagg 150
           |||||||| |||||||||||||||
Sbjct: 465 actagatccaggcggatctggagg 488

to top

>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
              sequence
          Length = 1347793

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    cccaacgagtacatccgcgg 409
              ||||||||||||||||||||
Sbjct: 773058 cccaacgagtacatccgcgg 773039

to top

>gb|AY372423.1| Medicago truncatula B gene, partial sequence
          Length = 6574

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 376 acaacctgcagcaccccaacgagt 399
           |||| |||||||||||||||||||
Sbjct: 935 acaaactgcagcaccccaacgagt 912

to top

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     gccgccaaggtcgaggccat 181
               ||||||||||||||||||||
Sbjct: 2893165 gccgccaaggtcgaggccat 2893146

to top

>emb|CR925828.3| Zebrafish DNA sequence from clone DKEY-156K7 in linkage group 16,
              complete sequence
          Length = 188634

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 283    agctgctgctcctctacctcgaga 306
              ||||||||||||||||| ||||||
Sbjct: 147809 agctgctgctcctctacatcgaga 147832

to top

>emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6, COMPLETE SEQUENCE
          Length = 127675

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 376   acaacctgcagcaccccaacgagt 399
             |||| |||||||||||||||||||
Sbjct: 42307 acaaactgcagcaccccaacgagt 42330

to top

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     ccaaggtcgaggccatgaag 185
               ||||||||||||||||||||
Sbjct: 1720007 ccaaggtcgaggccatgaag 1720026



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    ccaaggtcgaggccatgaag 185
              ||||||||||||||||||||
Sbjct: 728522 ccaaggtcgaggccatgaag 728541

to top

>gb|AE005768.1| Caulobacter crescentus CB15 section 94 of 359 of the complete genome
          Length = 11751

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 39   ccaaccaccatcaacccacccgcc 62
            ||||||| ||||||||||||||||
Sbjct: 9838 ccaaccagcatcaacccacccgcc 9861

to top

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 131     gatcaaggcggatctggagg 150
               ||||||||||||||||||||
Sbjct: 1763887 gatcaaggcggatctggagg 1763868

to top

>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence
          Length = 193444

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 127    actagatcaaggcggatctggagg 150
              |||||||| |||||||||||||||
Sbjct: 127628 actagatccaggcggatctggagg 127605

to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 158     cgtcgccgccaaggtcgagg 177
               ||||||||||||||||||||
Sbjct: 4994308 cgtcgccgccaaggtcgagg 4994327

to top

>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0434C04
          Length = 150064

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 127   actagatcaaggcggatctggagg 150
             |||||||| |||||||||||||||
Sbjct: 55222 actagatccaggcggatctggagg 55199

to top

>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0408G07
          Length = 126631

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 127    actagatcaaggcggatctggagg 150
              |||||||| |||||||||||||||
Sbjct: 119956 actagatccaggcggatctggagg 119933

to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 200     cctcctcaatggcgagacactgcc 223
               |||||||||||||||||| |||||
Sbjct: 7448022 cctcctcaatggcgagactctgcc 7448045

to top

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    ccaaggtcgaggccatgaag 185
              ||||||||||||||||||||
Sbjct: 759001 ccaaggtcgaggccatgaag 759020

to top

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 154     gcgacgtcgccgccaaggtc 173
               ||||||||||||||||||||
Sbjct: 1266036 gcgacgtcgccgccaaggtc 1266017

to top

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 318     cgcaacgccgccggccgcgttctcccgg 345
               ||||||||||| ||||||||||||||||
Sbjct: 1217539 cgcaacgccgc-ggccgcgttctcccgg 1217565

to top

>gb|AC157784.2| Mus musculus chromosome 18, clone RP24-163C18, complete sequence
          Length = 182283

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     ccagatccactctgcccagg 32
              ||||||||||||||||||||
Sbjct: 122525 ccagatccactctgcccagg 122506


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,285,717
Number of Sequences: 3902068
Number of extensions: 3285717
Number of successful extensions: 74453
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 73298
Number of HSP's gapped (non-prelim): 1152
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result