ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IF2_CHLCV (Q823F2) Translation initiation factor IF-2 29 4.0
2ERRFI_MOUSE (Q99JZ7) ERBB receptor feedback inhibitor 1 (Mitogen... 29 4.0
3ATG11_ASHGO (Q75B79) Autophagy-related protein 11 28 6.8
4KLOT_RAT (Q9Z2Y9) Klotho precursor (EC 3.2.1.31) [Contains: Klot... 28 8.8

>IF2_CHLCV (Q823F2) Translation initiation factor IF-2|
          Length = 887

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 31  VSIDLSKPPPPLPVSGDAAA 90
           VS DL+ P PP+PV  DA+A
Sbjct: 96  VSEDLNSPQPPVPVDSDASA 115



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>ERRFI_MOUSE (Q99JZ7) ERBB receptor feedback inhibitor 1 (Mitogen-inducible gene|
           6 protein homolog) (Mig-6)
          Length = 461

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 46  SKPPPPLPVSGDAAADRAGSE 108
           S+P PPLP+S D   D A SE
Sbjct: 149 SRPLPPLPISEDLCVDEADSE 169



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>ATG11_ASHGO (Q75B79) Autophagy-related protein 11|
          Length = 1072

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 34   SIDLSKPPPPLPVSGDA 84
            S+DLS PPPPLP +  +
Sbjct: 973  SVDLSTPPPPLPTASQS 989



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>KLOT_RAT (Q9Z2Y9) Klotho precursor (EC 3.2.1.31) [Contains: Klotho peptide]|
          Length = 1014

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 4   RGVPPNAVDVSIDLSKPPPPLPVSGDAAAD 93
           R +P ++  V      P PPLP +GD A+D
Sbjct: 100 RAIPEDSPIVMAPSGAPLPPLPSTGDVASD 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.305    0.127    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,635,170
Number of Sequences: 219361
Number of extensions: 207783
Number of successful extensions: 825
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 80,573,946
effective HSP length: 34
effective length of database: 73,115,672
effective search space used: 1754776128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
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