Clone Name | bastl43d05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 113 bits (57), Expect = 2e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 114 gatggacgcggagctcctggagctgcagcggcagctggaggcggcgcagagcgcgcggac 173 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 99530 gatggacgcggagctcctggagctgcagcggcagctggaggcggcacagagcgcgcggtc 99589 Query: 174 gagcg 178 ||||| Sbjct: 99590 gagcg 99594
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 113 bits (57), Expect = 2e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 114 gatggacgcggagctcctggagctgcagcggcagctggaggcggcgcagagcgcgcggac 173 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 895106 gatggacgcggagctcctggagctgcagcggcagctggaggcggcacagagcgcgcggtc 895165 Query: 174 gagcg 178 ||||| Sbjct: 895166 gagcg 895170 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggaggcg 156 ||||||||||||||||||||| Sbjct: 16527784 ctgcagcggcagctggaggcg 16527804 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 65 tccccgtctccggcgacgccgcagcgg 91 |||||||| ||||||||||||| |||| Sbjct: 16863327 tccccgtcgccggcgacgccgccgcgg 16863301
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 48.1 bits (24), Expect = 0.009 Identities = 24/24 (100%) Strand = Plus / Plus Query: 74 ccggcgacgccgcagcggatcgcg 97 |||||||||||||||||||||||| Sbjct: 1854233 ccggcgacgccgcagcggatcgcg 1854256
>ref|XM_450627.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2124 Score = 46.1 bits (23), Expect = 0.036 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 ccgtctccggcgacgccgcagcggatc 94 ||||||||||||||||||| ||||||| Sbjct: 45 ccgtctccggcgacgccgccgcggatc 71
>gb|DQ397871.1| Cenarchaeum symbiosum clone C18C04, complete sequence Length = 36161 Score = 46.1 bits (23), Expect = 0.036 Identities = 23/23 (100%) Strand = Plus / Plus Query: 133 gagctgcagcggcagctggaggc 155 ||||||||||||||||||||||| Sbjct: 7570 gagctgcagcggcagctggaggc 7592
>gb|DQ397634.1| Cenarchaeum symbiosum clone C05E04, complete sequence Length = 40921 Score = 46.1 bits (23), Expect = 0.036 Identities = 23/23 (100%) Strand = Plus / Plus Query: 133 gagctgcagcggcagctggaggc 155 ||||||||||||||||||||||| Sbjct: 7219 gagctgcagcggcagctggaggc 7241
>gb|DQ397620.1| Cenarchaeum symbiosum clone C07H12, complete sequence Length = 40229 Score = 46.1 bits (23), Expect = 0.036 Identities = 23/23 (100%) Strand = Plus / Minus Query: 133 gagctgcagcggcagctggaggc 155 ||||||||||||||||||||||| Sbjct: 99 gagctgcagcggcagctggaggc 77
>gb|DQ397578.1| Cenarchaeum symbiosum clone C13F12, complete sequence Length = 39464 Score = 46.1 bits (23), Expect = 0.036 Identities = 23/23 (100%) Strand = Plus / Minus Query: 133 gagctgcagcggcagctggaggc 155 ||||||||||||||||||||||| Sbjct: 36033 gagctgcagcggcagctggaggc 36011
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.036 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 ccgtctccggcgacgccgcagcggatc 94 ||||||||||||||||||| ||||||| Sbjct: 11880869 ccgtctccggcgacgccgccgcggatc 11880895
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 46.1 bits (23), Expect = 0.036 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 ccgtctccggcgacgccgcagcggatc 94 ||||||||||||||||||| ||||||| Sbjct: 62359 ccgtctccggcgacgccgccgcggatc 62385
>dbj|AK111875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043A02, full insert sequence Length = 2124 Score = 46.1 bits (23), Expect = 0.036 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 ccgtctccggcgacgccgcagcggatc 94 ||||||||||||||||||| ||||||| Sbjct: 45 ccgtctccggcgacgccgccgcggatc 71
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 gcggatcgcgccggcagcgaag 109 |||||||||||||||||||||| Sbjct: 3078796 gcggatcgcgccggcagcgaag 3078817
>gb|AC105219.6| Homo sapiens chromosome 8, clone RP11-429J17, complete sequence Length = 177816 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 tgcagcggcagctggaggcggcgcag 162 ||||||||||||||||||||| |||| Sbjct: 38392 tgcagcggcagctggaggcggtgcag 38367
>ref|XM_937564.1| PREDICTED: Homo sapiens hypothetical protein LOC648513 (LOC648513), mRNA Length = 1479 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Plus Query: 137 tgcagcggcagctggaggcggcgcag 162 ||||||||||||||||||||| |||| Sbjct: 1274 tgcagcggcagctggaggcggtgcag 1299
>ref|XM_926060.1| PREDICTED: Homo sapiens similar to CG3104-PA, isoform A (LOC642574), mRNA Length = 1665 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Plus Query: 137 tgcagcggcagctggaggcggcgcag 162 ||||||||||||||||||||| |||| Sbjct: 1460 tgcagcggcagctggaggcggtgcag 1485
>gb|AC105049.4| Homo sapiens chromosome 8, clone RP11-299M14, complete sequence Length = 92291 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 tgcagcggcagctggaggcggcgcag 162 ||||||||||||||||||||| |||| Sbjct: 69925 tgcagcggcagctggaggcggtgcag 69900
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggaggcg 156 ||||||||||||||||||||| Sbjct: 26523 ctgcagcggcagctggaggcg 26543
>ref|XM_583626.2| PREDICTED: Bos taurus hypothetical LOC507073 (LOC507073), mRNA Length = 2007 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctgga 152 ||||||||||||||||||||| Sbjct: 387 ggagctgcagcggcagctgga 407
>ref|XM_870885.1| PREDICTED: Bos taurus similar to myosin, heavy polypeptide 7B, cardiac muscle, beta (LOC521764), mRNA Length = 6475 Score = 42.1 bits (21), Expect = 0.56 Identities = 30/33 (90%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggaggcggcgcagag 164 |||| |||||||| ||||||||||||| ||||| Sbjct: 5070 ggagatgcagcgggagctggaggcggcccagag 5102
>gb|DQ481668.1| Takifugu rubripes HoxDa gene cluster, complete sequence Length = 366816 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 gagctgcagcggcagctggag 153 ||||||||||||||||||||| Sbjct: 260075 gagctgcagcggcagctggag 260055
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 agctgcagcggcagctggagg 154 ||||||||||||||||||||| Sbjct: 821232 agctgcagcggcagctggagg 821212
>ref|XM_842757.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0827) partial mRNA Length = 999 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 agctgcagcggcagctggagg 154 ||||||||||||||||||||| Sbjct: 362 agctgcagcggcagctggagg 382
>gb|BC007808.1| Homo sapiens myosin, heavy polypeptide 7B, cardiac muscle, beta, mRNA (cDNA clone IMAGE:4298477), partial cds Length = 3289 Score = 42.1 bits (21), Expect = 0.56 Identities = 30/33 (90%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggaggcggcgcagag 164 |||| |||||||| ||||||||||||| ||||| Sbjct: 1600 ggagatgcagcgggagctggaggcggcacagag 1632 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctgg 151 |||||||||||||||||||| Sbjct: 1009 ggagctgcagcggcagctgg 1028
>emb|AL132825.35|HSDJ756N5 Human DNA sequence from clone RP4-756N5 on chromosome 20q11.21-12 Contains the MYH7B gene for myosin heavy polypeptide 7B (cardiac muscle) beta, the C20orf188 gene for a novel protein similar to Trp4-associated protein TAP1 (ABCB2) and two CpG islands, complete sequence Length = 123782 Score = 42.1 bits (21), Expect = 0.56 Identities = 30/33 (90%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggaggcggcgcagag 164 |||| |||||||| ||||||||||||| ||||| Sbjct: 19715 ggagatgcagcgggagctggaggcggcacagag 19747 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctgg 151 |||||||||||||||||||| Sbjct: 18806 ggagctgcagcggcagctgg 18825
>gb|AC023687.3| Drosophila melanogaster X BAC RP98-36C7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185848 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 gcggagctcctggagctgcag 141 ||||||||||||||||||||| Sbjct: 168438 gcggagctcctggagctgcag 168418
>gb|AC023690.3| Drosophila melanogaster X BAC RP98-6M20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176233 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 gcggagctcctggagctgcag 141 ||||||||||||||||||||| Sbjct: 140266 gcggagctcctggagctgcag 140286
>ref|NM_020884.1| Homo sapiens myosin, heavy polypeptide 7B, cardiac muscle, beta (MYH7B), mRNA Length = 6289 Score = 42.1 bits (21), Expect = 0.56 Identities = 30/33 (90%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggaggcggcgcagag 164 |||| |||||||| ||||||||||||| ||||| Sbjct: 4622 ggagatgcagcgggagctggaggcggcacagag 4654 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctgg 151 |||||||||||||||||||| Sbjct: 4031 ggagctgcagcggcagctgg 4050
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 ggcgcagagcgcgcggacgag 176 ||||||||||||||||||||| Sbjct: 2709745 ggcgcagagcgcgcggacgag 2709725 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccgtctccggcgacgccgc 86 ||||||||||||||||||| Sbjct: 26268653 ccgtctccggcgacgccgc 26268671
>ref|XM_230774.3| PREDICTED: Rattus norvegicus myosin, heavy polypeptide 7B, cardiac muscle, beta (predicted) (Myh7b_predicted), mRNA Length = 6165 Score = 42.1 bits (21), Expect = 0.56 Identities = 30/33 (90%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggaggcggcgcagag 164 |||| |||||||| | ||||||||||||||||| Sbjct: 4641 ggagatgcagcgggaactggaggcggcgcagag 4673 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctg 150 ||||||||||||||||||| Sbjct: 4050 ggagctgcagcggcagctg 4068
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 ggcgcagagcgcgcggacgag 176 ||||||||||||||||||||| Sbjct: 165086 ggcgcagagcgcgcggacgag 165066
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 ggcgcagagcgcgcggacgag 176 ||||||||||||||||||||| Sbjct: 121492 ggcgcagagcgcgcggacgag 121472
>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete sequence Length = 315134 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 gcggagctcctggagctgcag 141 ||||||||||||||||||||| Sbjct: 181700 gcggagctcctggagctgcag 181720
>dbj|AB040945.2| Homo sapiens mRNA for KIAA1512 protein, partial cds Length = 6289 Score = 42.1 bits (21), Expect = 0.56 Identities = 30/33 (90%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggaggcggcgcagag 164 |||| |||||||| ||||||||||||| ||||| Sbjct: 4622 ggagatgcagcgggagctggaggcggcacagag 4654 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctgg 151 |||||||||||||||||||| Sbjct: 4031 ggagctgcagcggcagctgg 4050
>gb|AC145948.5| Gallus gallus BAC clone CH261-24O17 from chromosome unknown, complete sequence Length = 242530 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 ggagctgcagcggcagctgga 152 ||||||||||||||||||||| Sbjct: 48530 ggagctgcagcggcagctgga 48510
>ref|XM_474423.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1650 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 agctcctggagctgcagcggcagc 148 |||||| ||||||||||||||||| Sbjct: 1098 agctccaggagctgcagcggcagc 1121
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgaaggcgcgatggacgcgg 124 |||||||||||||||||||| Sbjct: 1435720 cgaaggcgcgatggacgcgg 1435701
>ref|XM_413933.1| PREDICTED: Gallus gallus similar to NADPH oxidase 5 alpha (LOC415565), mRNA Length = 3105 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggaggc 155 ||||||||||| |||||||||||| Sbjct: 600 ggagctgcagcagcagctggaggc 623
>ref|XM_419571.1| PREDICTED: Gallus gallus similar to hypothetical protein DKFZp547N043 (LOC421530), mRNA Length = 1813 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 agctcctggagctgcagcggcagc 148 ||||||||||||||||||| |||| Sbjct: 200 agctcctggagctgcagcgccagc 177
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgaaggcgcgatggacgcgg 124 |||||||||||||||||||| Sbjct: 2661851 cgaaggcgcgatggacgcgg 2661832
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tccccgtctccggcgacgcc 84 |||||||||||||||||||| Sbjct: 4025532 tccccgtctccggcgacgcc 4025513
>gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete sequence Length = 33673 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 ctggagctgcagcggcagctggag 153 ||||||||| |||||||||||||| Sbjct: 26996 ctggagctggagcggcagctggag 26973
>ref|XM_756004.1| Ustilago maydis 521 hypothetical protein (UM04950.1) partial mRNA Length = 3345 Score = 40.1 bits (20), Expect = 2.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 129 cctggagctgcagcggcagctggaggcg 156 |||||||||||||| ||||||| ||||| Sbjct: 2897 cctggagctgcagctgcagctgcaggcg 2870
>ref|XM_541475.2| PREDICTED: Canis familiaris similar to SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (GKAP/SAPAP interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor interacting protein) (SSTR interacting protein) (SSTRIP) (LOC484359), mRNA Length = 3516 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 gctcctggagctgcagcggc 145 |||||||||||||||||||| Sbjct: 2936 gctcctggagctgcagcggc 2917
>emb|BX571818.3| Human DNA sequence from clone RP11-38J22 on chromosome 1 Contains a novel gene, a ribosomal protein L22 (RPL22) pseudogene, a novel gene, the AVPR1B gene for arginine vasopressin receptor 1B, two novel genes, the CTSE gene for cathepsin E and two CpG islands, complete sequence Length = 170924 Score = 40.1 bits (20), Expect = 2.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 127 ctcctggagctgcagcggcagctggagg 154 |||||||||| ||||||||||| ||||| Sbjct: 144776 ctcctggagcggcagcggcagcgggagg 144803
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgaaggcgcgatggacgcgg 124 |||||||||||||||||||| Sbjct: 2283103 cgaaggcgcgatggacgcgg 2283122
>gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 of the complete genome Length = 324746 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 123 ggagctcctggagctgcagcggcagctggagg 154 |||||| ||| || |||||||||||||||||| Sbjct: 13064 ggagctgctgtaggtgcagcggcagctggagg 13033
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgaaggcgcgatggacgcgg 124 |||||||||||||||||||| Sbjct: 1721626 cgaaggcgcgatggacgcgg 1721645
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 agctcctggagctgcagcggcagc 148 |||||| ||||||||||||||||| Sbjct: 3672 agctccaggagctgcagcggcagc 3649
>emb|AJ245966.1|DRE245966 Danio rerio mRNA for Pbx4/Lazarus homeodomain protein (pbx4 gene, lzr gene) Length = 2438 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gctgcagcggcagctggagg 154 |||||||||||||||||||| Sbjct: 936 gctgcagcggcagctggagg 955
>gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from chromosome unknown, complete sequence Length = 188107 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ctgcagcggcagctggaggc 155 |||||||||||||||||||| Sbjct: 138495 ctgcagcggcagctggaggc 138476
>ref|XM_943542.1| PREDICTED: Homo sapiens hypothetical protein LOC649019 (LOC649019), mRNA Length = 777 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ggacgcggagctcctggagc 136 |||||||||||||||||||| Sbjct: 665 ggacgcggagctcctggagc 646
>ref|XM_933529.1| PREDICTED: Homo sapiens hypothetical protein LOC646305 (LOC646305), mRNA Length = 777 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ggacgcggagctcctggagc 136 |||||||||||||||||||| Sbjct: 665 ggacgcggagctcctggagc 646
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 123 ggagctcctggagctgcagcggcagctggagg 154 |||||| ||| || |||||||||||||||||| Sbjct: 1154512 ggagctgctgtaggtgcagcggcagctggagg 1154543
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 2.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 gcggagctcctggagctgcagcggcagc 148 ||||||| || ||||||||||||||||| Sbjct: 1472456 gcggagcgccaggagctgcagcggcagc 1472483
>ref|NM_171275.2| Caenorhabditis elegans K08D12.6 (K08D12.6) mRNA, complete cds Length = 2181 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 ctggagctgcagcggcagctggag 153 ||||||||| |||||||||||||| Sbjct: 1036 ctggagctggagcggcagctggag 1013
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 agctcctggagctgcagcggcagc 148 |||||| ||||||||||||||||| Sbjct: 35067169 agctccaggagctgcagcggcagc 35067146
>gb|DQ009621.1| Methanotorris igneus ribosomal protein L1 operon, complete sequence Length = 2320 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 ctggagctgcagcggcagctggag 153 ||||||||||||| |||||||||| Sbjct: 2113 ctggagctgcagcagcagctggag 2090
>gb|AE004519.1| Pseudomonas aeruginosa PAO1, section 80 of 529 of the complete genome Length = 11622 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ggcggcgcagagcgcgcgga 172 |||||||||||||||||||| Sbjct: 1611 ggcggcgcagagcgcgcgga 1630
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 123 ggagctcctggagctgcagcggcagctggagg 154 |||||| ||| || |||||||||||||||||| Sbjct: 916930 ggagctgctgtaggtgcagcggcagctggagg 916899
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 123 ggagctcctggagctgcagcggcagctggagg 154 |||||| ||| || |||||||||||||||||| Sbjct: 916252 ggagctgctgtaggtgcagcggcagctggagg 916221
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 agctcctggagctgcagcggcagc 148 |||||| ||||||||||||||||| Sbjct: 21902 agctccaggagctgcagcggcagc 21879
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 agcgaaggcgcgatggacgc 122 |||||||||||||||||||| Sbjct: 1193906 agcgaaggcgcgatggacgc 1193887
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgaaggcgcgatggacgcgg 124 |||||||||||||||||||| Sbjct: 2481112 cgaaggcgcgatggacgcgg 2481131
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 agctcctggagctgcagcggcagc 148 |||||| ||||||||||||||||| Sbjct: 126216 agctccaggagctgcagcggcagc 126193
>emb|AL513423.3|HS518K17 Homo sapiens chromosome 9 BAC RP11-518K17, complete sequence Length = 170535 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ggacgcggagctcctggagc 136 |||||||||||||||||||| Sbjct: 83582 ggacgcggagctcctggagc 83563
>emb|AL590327.3|CNS07EG8 Human chromosome 14 DNA sequence Partial sequence from BAC C-2507D9 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 59297 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 gcggcagctggaggcggcgc 160 |||||||||||||||||||| Sbjct: 23318 gcggcagctggaggcggcgc 23299
>ref|XM_479662.1| Oryza sativa (japonica cultivar-group), mRNA Length = 635 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 141 gcggcagctggaggcggcg 159 ||||||||||||||||||| Sbjct: 339 gcggcagctggaggcggcg 321
>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06, complete sequence Length = 143130 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 65 tccccgtctccggcgacgccgcagcgg 91 |||||||| ||||||||||||| |||| Sbjct: 75823 tccccgtcgccggcgacgccgccgcgg 75797
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 38.2 bits (19), Expect = 8.7 Identities = 28/31 (90%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggaggcggcgcag 162 ||||| |||||||||||||||| ||| |||| Sbjct: 532454 ggagcagcagcggcagctggagccggggcag 532484
>gb|AC120532.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0054A24 map S1559, complete sequence Length = 69349 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 cgtctccggcgacgccgca 87 ||||||||||||||||||| Sbjct: 19356 cgtctccggcgacgccgca 19338
>gb|AC099038.2| Drosophila melanogaster clone BACR28A23, complete sequence Length = 164826 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 agctgcagcggcagctgga 152 ||||||||||||||||||| Sbjct: 160009 agctgcagcggcagctgga 160027
>gb|AY947465.1| Prunus dulcis FL (FL) mRNA, complete cds Length = 1574 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 134 agctgcagcggcagctggaggcg 156 |||||||||||||||| |||||| Sbjct: 197 agctgcagcggcagcttgaggcg 175
>ref|XM_422270.1| PREDICTED: Gallus gallus similar to torsin family 3, member A; ATP-dependant interferon response protein 1; ATP-dependant interferon responsive (LOC424426), mRNA Length = 1353 Score = 38.2 bits (19), Expect = 8.7 Identities = 28/31 (90%) Strand = Plus / Plus Query: 123 ggagctcctggagctgcagcggcagctggag 153 |||||||||||||| ||||| || ||||||| Sbjct: 1056 ggagctcctggagcagcagctgcggctggag 1086
>ref|XM_426243.1| PREDICTED: Gallus gallus similar to paraneoplastic antigen (LOC428685), mRNA Length = 1392 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 124 gagctcctggagctgcagc 142 ||||||||||||||||||| Sbjct: 748 gagctcctggagctgcagc 766
>ref|XM_590631.2| PREDICTED: Bos taurus similar to C15A7.2 (LOC513015), mRNA Length = 1200 Score = 38.2 bits (19), Expect = 8.7 Identities = 31/35 (88%) Strand = Plus / Minus Query: 132 ggagctgcagcggcagctggaggcggcgcagagcg 166 ||||| |||||||| || | ||||||||||||||| Sbjct: 55 ggagcagcagcggcggcagcaggcggcgcagagcg 21
>ref|XM_584090.2| PREDICTED: Bos taurus similar to centrosomal protein 2 (LOC507479), mRNA Length = 7634 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggagg 154 ||||||||||| ||||||||||| Sbjct: 1425 ggagctgcagcagcagctggagg 1447
>gb|BC012443.1| Homo sapiens hook homolog 2 (Drosophila), mRNA (cDNA clone MGC:8882 IMAGE:3859634), complete cds Length = 2545 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggagg 154 |||||||||||| |||||||||| Sbjct: 1543 ggagctgcagcgccagctggagg 1565
>ref|XM_534397.2| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 7B, cardiac muscle, beta (LOC477206), mRNA Length = 5775 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 133 gagctgcagcggcagctgg 151 ||||||||||||||||||| Sbjct: 3616 gagctgcagcggcagctgg 3634
>gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, complete sequence Length = 200841 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 133 gagctgcagcggcagctggaggc 155 |||| |||||||||||||||||| Sbjct: 87304 gagcagcagcggcagctggaggc 87282
>ref|XM_540486.2| PREDICTED: Canis familiaris similar to hepatocyte growth factor-regulated tyrosine kinase substrate, transcript variant 1 (LOC483367), mRNA Length = 2351 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 129 cctggagctgcagcggcagctgg 151 ||||||| ||||||||||||||| Sbjct: 1583 cctggaggtgcagcggcagctgg 1605
>ref|XM_850826.1| PREDICTED: Canis familiaris similar to hepatocyte growth factor-regulated tyrosine kinase substrate, transcript variant 3 (LOC483367), mRNA Length = 2285 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 129 cctggagctgcagcggcagctgg 151 ||||||| ||||||||||||||| Sbjct: 1517 cctggaggtgcagcggcagctgg 1539
>ref|XM_801911.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511823.14) partial mRNA Length = 3388 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 3301 ctgcagcggcagctggagg 3319 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 3196 ctgcagcggcagctggagg 3214 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 3091 ctgcagcggcagctggagg 3109 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2986 ctgcagcggcagctggagg 3004 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2881 ctgcagcggcagctggagg 2899 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2776 ctgcagcggcagctggagg 2794 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2671 ctgcagcggcagctggagg 2689 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2566 ctgcagcggcagctggagg 2584 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2461 ctgcagcggcagctggagg 2479 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2356 ctgcagcggcagctggagg 2374 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2251 ctgcagcggcagctggagg 2269 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2146 ctgcagcggcagctggagg 2164 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2041 ctgcagcggcagctggagg 2059 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 1936 ctgcagcggcagctggagg 1954 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 1831 ctgcagcggcagctggagg 1849
>ref|XM_811656.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511821.179) partial mRNA Length = 3718 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 2177 ctgcagcggcagctggagg 2195 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 1967 ctgcagcggcagctggagg 1985 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 1862 ctgcagcggcagctggagg 1880 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 1757 ctgcagcggcagctggagg 1775 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 1547 ctgcagcggcagctggagg 1565 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 1337 ctgcagcggcagctggagg 1355 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 1127 ctgcagcggcagctggagg 1145 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 1022 ctgcagcggcagctggagg 1040 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 917 ctgcagcggcagctggagg 935 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 812 ctgcagcggcagctggagg 830 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 707 ctgcagcggcagctggagg 725 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 602 ctgcagcggcagctggagg 620 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 497 ctgcagcggcagctggagg 515 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 392 ctgcagcggcagctggagg 410 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 287 ctgcagcggcagctggagg 305 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 182 ctgcagcggcagctggagg 200 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 ctgcagcggcagctggagg 154 ||||||||||||||||||| Sbjct: 77 ctgcagcggcagctggagg 95
>emb|CR713173.2|CNS0GD8H Tetraodon nigroviridis full-length cDNA Length = 587 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 135 gctgcagcggcagctggaggcggcgca 161 |||||||| |||||||||||| ||||| Sbjct: 347 gctgcagcagcagctggaggctgcgca 373
>emb|CR709304.2|CNS0GA90 Tetraodon nigroviridis full-length cDNA Length = 1023 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 135 gctgcagcggcagctggaggcggcgca 161 |||||||| |||||||||||| ||||| Sbjct: 336 gctgcagcagcagctggaggctgcgca 362
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 cgccgcagcggatcgcgcc 99 ||||||||||||||||||| Sbjct: 96806 cgccgcagcggatcgcgcc 96824
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 agctgcagcggcagctgga 152 ||||||||||||||||||| Sbjct: 285396 agctgcagcggcagctgga 285414
>gb|AC163343.2| Mus musculus BAC clone RP23-472D11 from chromosome 13, complete sequence Length = 164331 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 cggcagctggaggcggcgc 160 ||||||||||||||||||| Sbjct: 32793 cggcagctggaggcggcgc 32811
>gb|AC020934.9| Homo sapiens chromosome 19 clone CTD-2265O21, complete sequence Length = 119347 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 132 ggagctgcagcggcagctggagg 154 |||||||||||| |||||||||| Sbjct: 1094 ggagctgcagcgccagctggagg 1072
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 38.2 bits (19), Expect = 8.7 Identities = 29/31 (93%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 130 ctggagctgcagcggcagctggaggcggcgc 160 ||||||||||||| |||||||| |||||||| Sbjct: 170266 ctggagctgcagctgcagctgg-ggcggcgc 170295
>gb|AY094695.1| Drosophila melanogaster GH09650 full insert cDNA Length = 1440 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 agctgcagcggcagctgga 152 ||||||||||||||||||| Sbjct: 612 agctgcagcggcagctgga 630
>ref|NM_132828.1| Drosophila melanogaster CG8134-RA (CG8134), mRNA Length = 1431 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 agctgcagcggcagctgga 152 ||||||||||||||||||| Sbjct: 612 agctgcagcggcagctgga 630
>gb|AC092401.1|AC092401 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone BACR25C18, complete sequence Length = 185200 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 agctgcagcggcagctgga 152 ||||||||||||||||||| Sbjct: 16459 agctgcagcggcagctgga 16477
>dbj|AK012650.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810002O05 product:sideroflexin 1, full insert sequence Length = 1228 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 cggcagctggaggcggcgc 160 ||||||||||||||||||| Sbjct: 29 cggcagctggaggcggcgc 47
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 cgtctccggcgacgccgca 87 ||||||||||||||||||| Sbjct: 3837730 cgtctccggcgacgccgca 3837712
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 141 gcggcagctggaggcggcg 159 ||||||||||||||||||| Sbjct: 153190 gcggcagctggaggcggcg 153172
>gb|AC010670.8|AC010670 Drosophila melanogaster, chromosome 3R, region 94E-95A, BAC clone BACR01E13, complete sequence Length = 155957 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 cgtcgacgtctcgatcgat 42 ||||||||||||||||||| Sbjct: 91962 cgtcgacgtctcgatcgat 91944
>gb|AE004727.1| Pseudomonas aeruginosa PAO1, section 288 of 529 of the complete genome Length = 12772 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 ccggcgacgccgcagcgga 92 ||||||||||||||||||| Sbjct: 6497 ccggcgacgccgcagcgga 6479
>gb|AF260753.1|AF260753 Cricetulus griseus plectin mRNA, partial cds Length = 14618 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 130 ctggagctgcagcggcagc 148 ||||||||||||||||||| Sbjct: 7504 ctggagctgcagcggcagc 7522
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccgtctccggcgacgccgc 86 ||||||||||||||||||| Sbjct: 133193 ccgtctccggcgacgccgc 133211
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 141 gcggcagctggaggcggcg 159 ||||||||||||||||||| Sbjct: 68525 gcggcagctggaggcggcg 68507
>dbj|AK120363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068G21, full insert sequence Length = 635 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 141 gcggcagctggaggcggcg 159 ||||||||||||||||||| Sbjct: 339 gcggcagctggaggcggcg 321
>dbj|AK129729.1| Homo sapiens cDNA FLJ26218 fis, clone ADG08191 Length = 2095 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggagg 154 |||||||||||| |||||||||| Sbjct: 359 ggagctgcagcgccagctggagg 381
>ref|XM_312517.2| Anopheles gambiae str. PEST ENSANGP00000014236 (ENSANGG00000011747), partial mRNA Length = 1671 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggagg 154 ||||||| ||||||||||||||| Sbjct: 888 ggagctgaagcggcagctggagg 910
>emb|CT030176.18| Mouse DNA sequence from clone RP23-142L17 on chromosome 13, complete sequence Length = 218075 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 cggcagctggaggcggcgc 160 ||||||||||||||||||| Sbjct: 206472 cggcagctggaggcggcgc 206490
>dbj|AK065812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038A03, full insert sequence Length = 1389 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccgtctccggcgacgccgc 86 ||||||||||||||||||| Sbjct: 67 ccgtctccggcgacgccgc 49
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccgtctccggcgacgccgc 86 ||||||||||||||||||| Sbjct: 36409 ccgtctccggcgacgccgc 36427
>gb|AE003742.4| Drosophila melanogaster chromosome 3R, section 80 of 118 of the complete sequence Length = 233746 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 cgtcgacgtctcgatcgat 42 ||||||||||||||||||| Sbjct: 201917 cgtcgacgtctcgatcgat 201899
>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete sequence Length = 300896 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 agctgcagcggcagctgga 152 ||||||||||||||||||| Sbjct: 300015 agctgcagcggcagctgga 300033
>gb|AC151999.5| Mus musculus BAC clone RP23-98D11 from chromosome 8, complete sequence Length = 229414 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 125 agctcctggagctgcagcg 143 ||||||||||||||||||| Sbjct: 146447 agctcctggagctgcagcg 146465
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 132 ggagctgcagcggcagctggaggcggc 158 |||| |||||| ||||||||||||||| Sbjct: 99292 ggaggtgcagcagcagctggaggcggc 99266
>gb|U10425.1|MSU10425 Mycobacterium smegmatis ferric exochelin uptake proteins FxuB (fxuB), FxuA (fxuA) genes, complete cds, FxuC (fxuC) gene, partial cds, and ferric exochelin biosynthesis protein FxbA (fxbA) gene, complete cds Length = 4261 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gccgtcgacgtctcgatcg 40 ||||||||||||||||||| Sbjct: 1947 gccgtcgacgtctcgatcg 1965
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 cgtctccggcgacgccgca 87 ||||||||||||||||||| Sbjct: 3846424 cgtctccggcgacgccgca 3846406
>emb|CT030137.13| Mouse DNA sequence from clone RP24-374C21 on chromosome 12, complete sequence Length = 197285 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 138 gcagcggcagctggaggcggcgc 160 ||||||||||| ||||||||||| Sbjct: 68994 gcagcggcagcgggaggcggcgc 69016
>gb|DQ280500.1| Streptomyces olindensis DAUFPE 5622 cosmomycin gene cluster, partial sequence Length = 14080 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ccccaacgccgtcgacgtc 33 ||||||||||||||||||| Sbjct: 11516 ccccaacgccgtcgacgtc 11534
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 135 gctgcagcggcagctggag 153 ||||||||||||||||||| Sbjct: 2862877 gctgcagcggcagctggag 2862895
>gb|L07319.1|HS5DUT Murine cytomegalovirus (clone HindIII D) transmembrane protein gene, complete cds; dUTPase (dut) gene, complete cds; UL71 gene homologue, complete cds; helicase/primase (hel/pri) gene, complete cds; tegument protein gene, complete cds Length = 9340 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 132 ggagctgcagcggcagctggaggcggc 158 |||| |||||| ||||||||||||||| Sbjct: 5765 ggaggtgcagcagcagctggaggcggc 5791
>gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosome 8, complete sequence Length = 214760 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 133 gagctgcagcggcagctggaggc 155 |||| |||||||||||||||||| Sbjct: 189917 gagcagcagcggcagctggaggc 189939 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,058,521 Number of Sequences: 3902068 Number of extensions: 1058521 Number of successful extensions: 93710 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 90701 Number of HSP's gapped (non-prelim): 3008 length of query: 178 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 156 effective length of database: 17,147,199,772 effective search space: 2674963164432 effective search space used: 2674963164432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)