ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469034.1| Oryza sativa (japonica cultivar-group), mRNA 591 e-166
2dbj|AK102019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 583 e-163
3gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome... 244 2e-61
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 244 2e-61
5gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genom... 244 2e-61
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
7ref|NM_121828.3| Arabidopsis thaliana transcription regulator AT... 119 8e-24
8gb|AF370523.1|AF370523 Arabidopsis thaliana Unknown protein (MRG... 119 8e-24
9gb|BT002177.1| Arabidopsis thaliana Unknown protein (At5g18230) ... 119 8e-24
10emb|BX832691.1|CNS09YVD Arabidopsis thaliana Full-length cDNA Co... 105 1e-19
11gb|AC167711.1| Medicago truncatula chromosome 7 BAC clone mth2-1... 84 5e-13
12dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 80 7e-12
13emb|BX934282.2| Gallus gallus finished cDNA, clone ChEST664c2 60 7e-06
14emb|CR353749.1| Gallus gallus finished cDNA, clone ChEST927a10 60 7e-06
15ref|XM_512885.1| PREDICTED: Pan troglodytes CCR4-NOT transcripti... 58 3e-05
16ref|XM_965414.1| PREDICTED: Tribolium castaneum similar to CCR4-... 58 3e-05
17ref|NM_014516.2| Homo sapiens CCR4-NOT transcription complex, su... 56 1e-04
18ref|XM_605695.2| PREDICTED: Bos taurus similar to CCR4-NOT trans... 56 1e-04
19gb|BC016474.1| Homo sapiens CCR4-NOT transcription complex, subu... 56 1e-04
20dbj|AK160386.1| Homo sapiens mRNA for FLJ00420 protein 56 1e-04
21dbj|AB014591.1| Homo sapiens mRNA for KIAA0691 protein, partial cds 56 1e-04
22gb|AF180474.1|AF180474 Homo sapiens Not3p (NOT3) mRNA, complete cds 56 1e-04
23emb|CT032980.1| Platynereis dumerilii EST IB0AAA28CB11EM1 56 1e-04
24ref|XM_503626.1| Yarrowia lipolytica CLIB122, YALI0E06435g predi... 54 4e-04
25emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 54 4e-04
26gb|BC053437.1| Mus musculus CCR4-NOT transcription complex, subu... 50 0.006
27gb|BC030332.1| Mus musculus CCR4-NOT transcription complex, subu... 50 0.006
28gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hos... 50 0.006
29ref|XM_806046.1| Trypanosoma cruzi strain CL Brener hypothetical... 50 0.006
30gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's ... 50 0.006
31gb|AC130680.13| Mus musculus chromosome 7, clone RP23-180G17, co... 50 0.006
32dbj|AK141718.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 50 0.006
33gb|AC012314.8| Homo sapiens chromosome 19 clone CTD-3093M3, comp... 50 0.006
34ref|XM_218187.3| PREDICTED: Rattus norvegicus CCR4-NOT transcrip... 50 0.006
35gb|AC171680.5| Mus musculus chromosome 7, clone RP23-146B24, com... 50 0.006
36ref|NM_146176.1| Mus musculus CCR4-NOT transcription complex, su... 50 0.006
37gb|AC163770.3| Pan troglodytes BAC clone CH251-4E4 from chromoso... 48 0.025
38gb|AC163764.4| Pan troglodytes BAC clone CH251-169M18 from chrom... 48 0.025
39gb|AC156839.4| Pan troglodytes BAC clone CH251-349M12 from chrom... 48 0.025
40gb|AF296835.1|T8M17 Arabidopsis thaliana BAC T8M17 48 0.025
41dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 46 0.100
42gb|DQ127560.1| Emiliania huxleyi virus 163 clone mike228.seq par... 44 0.39
43emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 44 0.39
44ref|XM_362518.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.6
45gb|AC139569.3| Mus musculus BAC clone RP24-340F13 from chromosom... 42 1.6
46emb|CR847503.8| Zebrafish DNA sequence from clone DKEY-20D21 in ... 42 1.6
47gb|AC162183.4| Mus musculus BAC clone RP23-27I10 from chromosome... 42 1.6
48ref|XM_694579.1| PREDICTED: Danio rerio similar to cadherin EGF ... 42 1.6
49gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosyn... 42 1.6
50gb|AF207765.1|AF207765 Hepatitis C virus strain MD24 complete ge... 42 1.6
51gb|AC149407.2| Phakopsora pachyrhizi clone JGIAFNA-69I13, comple... 40 6.1
52gb|AC149394.2| Phakopsora pachyrhizi clone JGIAFNA-61H10, comple... 40 6.1
53gb|AE010359.1| Methanopyrus kandleri AV19 section 58 of 157 of t... 40 6.1
54gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
55gb|AC149414.1| Phakopsora pachyrhizi clone JGIAFNA-77J10, comple... 40 6.1
56ref|NM_023547.1| Mus musculus zinc finger, HIT type 4 (Znhit4), ... 40 6.1
57gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.1
58gb|BC058788.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA ... 40 6.1
59gb|BC019383.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA ... 40 6.1
60gb|BC047990.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA ... 40 6.1
61gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Can... 40 6.1
62ref|XM_368968.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 6.1
63ref|NM_031288.2| Homo sapiens zinc finger, HIT type 4 (ZNHIT4), ... 40 6.1
64gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 6.1
65gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence 40 6.1
66gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
67gb|BC064425.1| Homo sapiens zinc finger, HIT type 4, mRNA (cDNA ... 40 6.1
68gb|BC050666.2| Homo sapiens zinc finger, HIT type 4, mRNA (cDNA ... 40 6.1
69gb|BC039617.1| Homo sapiens zinc finger, HIT type 4, mRNA (cDNA ... 40 6.1
70gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, comp... 40 6.1
71ref|XM_757449.1| Ustilago maydis 521 hypothetical protein (UM063... 40 6.1
72gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, com... 40 6.1
73ref|XM_857733.1| PREDICTED: Canis familiaris similar to CCR4-NOT... 40 6.1
74ref|XM_857708.1| PREDICTED: Canis familiaris similar to CCR4-NOT... 40 6.1
75ref|XM_857684.1| PREDICTED: Canis familiaris similar to CCR4-NOT... 40 6.1
76ref|XM_541428.2| PREDICTED: Canis familiaris similar to CCR4-NOT... 40 6.1
77ref|XM_504771.1| Yarrowia lipolytica CLIB122, YALI0E34397g predi... 40 6.1
78emb|AL136136.7| Human DNA sequence from clone RP11-141E20 on chr... 40 6.1
79ref|XM_795335.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 6.1
80ref|XM_775255.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.1
81emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 6.1
82emb|CR625948.1| full-length cDNA clone CS0CAP002YH01 of Thymus o... 40 6.1
83emb|CR613137.1| full-length cDNA clone CS0DL003YN10 of B cells (... 40 6.1
84emb|CR600070.1| full-length cDNA clone CS0DF034YL10 of Fetal bra... 40 6.1
85dbj|AK055333.1| Homo sapiens cDNA FLJ30771 fis, clone FEBRA2000740 40 6.1
86gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genom... 40 6.1
87dbj|AK171909.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.1
88dbj|AK010946.1| Mus musculus 13 days embryo liver cDNA, RIKEN fu... 40 6.1
89gb|AY129332.1| Mycobacteriophage Bxz2, complete genome 40 6.1
90dbj|AK084736.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.1
91gb|AC149356.2| Phakopsora pachyrhizi clone JGIAFNA-41F14, comple... 40 6.1
92dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
93gb|AC010708.10|AC010708 Drosophila melanogaster, chromosome X, r... 40 6.1
94gb|AC012098.9|AC012098 Drosophila melanogaster, chromosome X, re... 40 6.1
95gb|AC005041.2|AC005041 Homo sapiens BAC clone RP11-523H20 from C... 40 6.1
96ref|XM_575576.1| PREDICTED: Rattus norvegicus similar to PAP-1 b... 40 6.1
97dbj|AK189382.1| Mus musculus cDNA, clone:Y0G0148P15, strand:minu... 40 6.1
98dbj|AB054538.1| Homo sapiens mRNA for PAPA-1, complete cds 40 6.1
99dbj|AB054537.1| Mus musculus gene for PAPA-1, complete cds 40 6.1
100emb|Y14428.1|MKY14428 Methanopyrus kandleri mtrE, mtrD, mtrC, mt... 40 6.1
101gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 ... 40 6.1
102gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone ... 40 6.1
103gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.1
104emb|AL845305.5| Mouse DNA sequence from clone RP23-202K13 on chr... 40 6.1
105dbj|AP003775.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.1 
>ref|XM_469034.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2662

 Score =  591 bits (298), Expect = e-166
 Identities = 361/382 (94%)
 Strand = Plus / Plus

                                                                       
Query: 75  gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtgctcaagaaggttcag 134
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 89  gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtcctcaagaaggtccag 148

                                                                       
Query: 135 gagggcgtcgacgtcttcgacagcatctggaacaaggtctacgacaccgagaatgcgaac 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gagggcgtcgacgtcttcgacagcatctggaacaaggtctacgacaccgagaatgcgaac 208

                                                                       
Query: 195 cagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgctaccgg 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 209 cagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcggtacagg 268

                                                                       
Query: 255 gaccagatcaagacctggatccagtccagcgagatcaaggacaagaaggctctcatggat 314
           |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 269 gaccagatcaagacgtggatccagtccagcgagatcaaggacaagaaggctcttatggat 328

                                                                       
Query: 315 gcccgcaagcagattgagcgcgagatggaacgatttaaggtctgtgagaaggaaactaaa 374
           ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 329 gcccgaaagcagattgaacgcgagatggaacgatttaaggtttgtgagaaggaaactaaa 388

                                                                       
Query: 375 accaaggccttctcgaaagaagggttaggacaacagccgaaaactgatcctagagagaaa 434
           || |||||||| || || ||||||||||| ||||| |||||||||||||| | |||||| 
Sbjct: 389 acgaaggccttttccaaggaagggttaggtcaacaaccgaaaactgatccaaaagagaag 448

                                 
Query: 435 ggctaagctgaaacaagagatt 456
           |   ||||||||||||||||||
Sbjct: 449 gcaaaagctgaaacaagagatt 470
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>dbj|AK102019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080H16, full
           insert sequence
          Length = 2754

 Score =  583 bits (294), Expect = e-163
 Identities = 360/382 (94%)
 Strand = Plus / Plus

                                                                       
Query: 75  gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtgctcaagaaggttcag 134
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 31  gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtcctcaagaaggtccag 90

                                                                       
Query: 135 gagggcgtcgacgtcttcgacagcatctggaacaaggtctacgacaccgagaatgcgaac 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  gagggcgtcgacgtcttcgacagcatctggaacaaggtctacgacaccgagaatgcgaac 150

                                                                       
Query: 195 cagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgctaccgg 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 151 cagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcggtacagg 210

                                                                       
Query: 255 gaccagatcaagacctggatccagtccagcgagatcaaggacaagaaggctctcatggat 314
           |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 211 gaccagatcaagacgtggatccagtccagcgagatcaaggacaagaaggctcttatggat 270

                                                                       
Query: 315 gcccgcaagcagattgagcgcgagatggaacgatttaaggtctgtgagaaggaaactaaa 374
           ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 271 gcccgaaagcagattgaacgcgagatggaacgatttaaggtttgtgagaaggaaactaaa 330

                                                                       
Query: 375 accaaggccttctcgaaagaagggttaggacaacagccgaaaactgatcctagagagaaa 434
           || |||||||| || || ||||||||||| ||||| |||||||||||||  | |||||| 
Sbjct: 331 acgaaggccttttccaaggaagggttaggtcaacaaccgaaaactgatcaaaaagagaag 390

                                 
Query: 435 ggctaagctgaaacaagagatt 456
           |   ||||||||||||||||||
Sbjct: 391 gcaaaagctgaaacaagagatt 412
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>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17
              map near S16403, complete sequence
          Length = 172238

 Score =  244 bits (123), Expect = 2e-61
 Identities = 132/135 (97%)
 Strand = Plus / Plus

                                                                          
Query: 169    aggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctcaagaagg 228
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164706 aggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctcaagaagg 164765

                                                                          
Query: 229    agatcaagaagctgcagcgctaccgggaccagatcaagacctggatccagtccagcgaga 288
              ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||
Sbjct: 164766 agatcaagaagctgcagcggtacagggaccagatcaagacgtggatccagtccagcgaga 164825

                             
Query: 289    tcaaggacaagaagg 303
              |||||||||||||||
Sbjct: 164826 tcaaggacaagaagg 164840



 Score =  176 bits (89), Expect = 4e-41
 Identities = 95/97 (97%)
 Strand = Plus / Plus

                                                                          
Query: 75     gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtgctcaagaaggttcag 134
              |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 164439 gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtcctcaagaaggtccag 164498

                                                   
Query: 135    gagggcgtcgacgtcttcgacagcatctggaacaagg 171
              |||||||||||||||||||||||||||||||||||||
Sbjct: 164499 gagggcgtcgacgtcttcgacagcatctggaacaagg 164535



 Score =  159 bits (80), Expect = 1e-35
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                          
Query: 301    aggctctcatggatgcccgcaagcagattgagcgcgagatggaacgatttaaggtctgtg 360
              ||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 166741 aggctcttatggatgcccgaaagcagattgaacgcgagatggaacgatttaaggtttgtg 166800

                                                                          
Query: 361    agaaggaaactaaaaccaaggccttctcgaaagaagggttaggacaacagccgaaaactg 420
              |||||||||||||||| |||||||| || || ||||||||||| ||||| ||||||||||
Sbjct: 166801 agaaggaaactaaaacgaaggccttttccaaggaagggttaggtcaacaaccgaaaactg 166860
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  244 bits (123), Expect = 2e-61
 Identities = 132/135 (97%)
 Strand = Plus / Plus

                                                                            
Query: 169      aggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctcaagaagg 228
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25048269 aggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctcaagaagg 25048328

                                                                            
Query: 229      agatcaagaagctgcagcgctaccgggaccagatcaagacctggatccagtccagcgaga 288
                ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||
Sbjct: 25048329 agatcaagaagctgcagcggtacagggaccagatcaagacgtggatccagtccagcgaga 25048388

                               
Query: 289      tcaaggacaagaagg 303
                |||||||||||||||
Sbjct: 25048389 tcaaggacaagaagg 25048403



 Score =  176 bits (89), Expect = 4e-41
 Identities = 95/97 (97%)
 Strand = Plus / Plus

                                                                            
Query: 75       gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtgctcaagaaggttcag 134
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 25048002 gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtcctcaagaaggtccag 25048061

                                                     
Query: 135      gagggcgtcgacgtcttcgacagcatctggaacaagg 171
                |||||||||||||||||||||||||||||||||||||
Sbjct: 25048062 gagggcgtcgacgtcttcgacagcatctggaacaagg 25048098



 Score =  159 bits (80), Expect = 1e-35
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                            
Query: 301      aggctctcatggatgcccgcaagcagattgagcgcgagatggaacgatttaaggtctgtg 360
                ||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 25050304 aggctcttatggatgcccgaaagcagattgaacgcgagatggaacgatttaaggtttgtg 25050363

                                                                            
Query: 361      agaaggaaactaaaaccaaggccttctcgaaagaagggttaggacaacagccgaaaactg 420
                |||||||||||||||| |||||||| || || ||||||||||| ||||| ||||||||||
Sbjct: 25050364 agaaggaaactaaaacgaaggccttttccaaggaagggttaggtcaacaaccgaaaactg 25050423



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 227      ggagatcaagaagctgcagc 246
                ||||||||||||||||||||
Sbjct: 30591182 ggagatcaagaagctgcagc 30591201
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>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete
             sequence
          Length = 170020

 Score =  244 bits (123), Expect = 2e-61
 Identities = 132/135 (97%)
 Strand = Plus / Plus

                                                                         
Query: 169   aggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctcaagaagg 228
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80076 aggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctcaagaagg 80135

                                                                         
Query: 229   agatcaagaagctgcagcgctaccgggaccagatcaagacctggatccagtccagcgaga 288
             ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||
Sbjct: 80136 agatcaagaagctgcagcggtacagggaccagatcaagacgtggatccagtccagcgaga 80195

                            
Query: 289   tcaaggacaagaagg 303
             |||||||||||||||
Sbjct: 80196 tcaaggacaagaagg 80210



 Score =  176 bits (89), Expect = 4e-41
 Identities = 95/97 (97%)
 Strand = Plus / Plus

                                                                         
Query: 75    gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtgctcaagaaggttcag 134
             |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 79809 gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtcctcaagaaggtccag 79868

                                                  
Query: 135   gagggcgtcgacgtcttcgacagcatctggaacaagg 171
             |||||||||||||||||||||||||||||||||||||
Sbjct: 79869 gagggcgtcgacgtcttcgacagcatctggaacaagg 79905



 Score =  159 bits (80), Expect = 1e-35
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                         
Query: 301   aggctctcatggatgcccgcaagcagattgagcgcgagatggaacgatttaaggtctgtg 360
             ||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 82111 aggctcttatggatgcccgaaagcagattgaacgcgagatggaacgatttaaggtttgtg 82170

                                                                         
Query: 361   agaaggaaactaaaaccaaggccttctcgaaagaagggttaggacaacagccgaaaactg 420
             |||||||||||||||| |||||||| || || ||||||||||| ||||| ||||||||||
Sbjct: 82171 agaaggaaactaaaacgaaggccttttccaaggaagggttaggtcaacaaccgaaaactg 82230
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  244 bits (123), Expect = 2e-61
 Identities = 132/135 (97%)
 Strand = Plus / Plus

                                                                            
Query: 169      aggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctcaagaagg 228
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25139578 aggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctcaagaagg 25139637

                                                                            
Query: 229      agatcaagaagctgcagcgctaccgggaccagatcaagacctggatccagtccagcgaga 288
                ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||
Sbjct: 25139638 agatcaagaagctgcagcggtacagggaccagatcaagacgtggatccagtccagcgaga 25139697

                               
Query: 289      tcaaggacaagaagg 303
                |||||||||||||||
Sbjct: 25139698 tcaaggacaagaagg 25139712



 Score =  176 bits (89), Expect = 4e-41
 Identities = 95/97 (97%)
 Strand = Plus / Plus

                                                                            
Query: 75       gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtgctcaagaaggttcag 134
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 25139311 gccatgggcgccagccggaagctgcagggcgagatcgaccgcgtcctcaagaaggtccag 25139370

                                                     
Query: 135      gagggcgtcgacgtcttcgacagcatctggaacaagg 171
                |||||||||||||||||||||||||||||||||||||
Sbjct: 25139371 gagggcgtcgacgtcttcgacagcatctggaacaagg 25139407



 Score =  159 bits (80), Expect = 1e-35
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                            
Query: 301      aggctctcatggatgcccgcaagcagattgagcgcgagatggaacgatttaaggtctgtg 360
                ||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 25141613 aggctcttatggatgcccgaaagcagattgaacgcgagatggaacgatttaaggtttgtg 25141672

                                                                            
Query: 361      agaaggaaactaaaaccaaggccttctcgaaagaagggttaggacaacagccgaaaactg 420
                |||||||||||||||| |||||||| || || ||||||||||| ||||| ||||||||||
Sbjct: 25141673 agaaggaaactaaaacgaaggccttttccaaggaagggttaggtcaacaaccgaaaactg 25141732



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 227      ggagatcaagaagctgcagc 246
                ||||||||||||||||||||
Sbjct: 30682604 ggagatcaagaagctgcagc 30682623
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>ref|NM_121828.3| Arabidopsis thaliana transcription regulator AT5G18230 mRNA,
           complete cds
          Length = 2876

 Score =  119 bits (60), Expect = 8e-24
 Identities = 165/200 (82%)
 Strand = Plus / Plus

                                                                       
Query: 102 ggcgagatcgaccgcgtgctcaagaaggttcaggagggcgtcgacgtcttcgacagcatc 161
           |||||||| || || ||||| ||||||||||| || || || || || ||||||||||||
Sbjct: 207 ggcgagatagatcgggtgctgaagaaggttcaagaaggtgttgatgttttcgacagcatc 266

                                                                       
Query: 162 tggaacaaggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctc 221
           ||||||||||| || || || || ||||  || || ||||| ||||| ||||| ||| | 
Sbjct: 267 tggaacaaggtatatgatacagacaatgttaatcaaaaggaaaagtttgaggcggacttg 326

                                                                       
Query: 222 aagaaggagatcaagaagctgcagcgctaccgggaccagatcaagacctggatccagtcc 281
           |||||||| ||||||||||||||||| ||  | |||||||||||||| ||||| ||||| 
Sbjct: 327 aagaaggaaatcaagaagctgcagcggtatagagaccagatcaagacatggattcagtct 386

                               
Query: 282 agcgagatcaaggacaagaa 301
           || |||||||| || |||||
Sbjct: 387 agtgagatcaaagataagaa 406
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>gb|AF370523.1|AF370523 Arabidopsis thaliana Unknown protein (MRG7.18) mRNA, complete cds
          Length = 2816

 Score =  119 bits (60), Expect = 8e-24
 Identities = 165/200 (82%)
 Strand = Plus / Plus

                                                                       
Query: 102 ggcgagatcgaccgcgtgctcaagaaggttcaggagggcgtcgacgtcttcgacagcatc 161
           |||||||| || || ||||| ||||||||||| || || || || || ||||||||||||
Sbjct: 206 ggcgagatagatcgggtgctgaagaaggttcaagaaggtgttgatgttttcgacagcatc 265

                                                                       
Query: 162 tggaacaaggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctc 221
           ||||||||||| || || || || ||||  || || ||||| ||||| ||||| ||| | 
Sbjct: 266 tggaacaaggtatatgatacagacaatgttaatcaaaaggaaaagtttgaggcggacttg 325

                                                                       
Query: 222 aagaaggagatcaagaagctgcagcgctaccgggaccagatcaagacctggatccagtcc 281
           |||||||| ||||||||||||||||| ||  | |||||||||||||| ||||| ||||| 
Sbjct: 326 aagaaggaaatcaagaagctgcagcggtatagagaccagatcaagacatggattcagtct 385

                               
Query: 282 agcgagatcaaggacaagaa 301
           || |||||||| || |||||
Sbjct: 386 agtgagatcaaagataagaa 405
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>gb|BT002177.1| Arabidopsis thaliana Unknown protein (At5g18230) mRNA, complete cds
          Length = 2599

 Score =  119 bits (60), Expect = 8e-24
 Identities = 165/200 (82%)
 Strand = Plus / Plus

                                                                       
Query: 102 ggcgagatcgaccgcgtgctcaagaaggttcaggagggcgtcgacgtcttcgacagcatc 161
           |||||||| || || ||||| ||||||||||| || || || || || ||||||||||||
Sbjct: 25  ggcgagatagatcgggtgctgaagaaggttcaagaaggtgttgatgttttcgacagcatc 84

                                                                       
Query: 162 tggaacaaggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctc 221
           ||||||||||| || || || || ||||  || || ||||| ||||| ||||| ||| | 
Sbjct: 85  tggaacaaggtatatgatacagacaatgttaatcaaaaggaaaagtttgaggcggacttg 144

                                                                       
Query: 222 aagaaggagatcaagaagctgcagcgctaccgggaccagatcaagacctggatccagtcc 281
           |||||||| ||||||||||||||||| ||  | |||||||||||||| ||||| ||||| 
Sbjct: 145 aagaaggaaatcaagaagctgcagcggtatagagaccagatcaagacatggattcagtct 204

                               
Query: 282 agcgagatcaaggacaagaa 301
           || |||||||| || |||||
Sbjct: 205 agtgagatcaaagataagaa 224
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>emb|BX832691.1|CNS09YVD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH8ZG06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2794

 Score =  105 bits (53), Expect = 1e-19
 Identities = 165/201 (82%), Gaps = 1/201 (0%)
 Strand = Plus / Plus

                                                                       
Query: 102 ggcgagatcgaccgcgtgctcaagaaggttcaggagggcgtcgacgtcttcgacagcatc 161
           |||||||| || || ||||| ||||||||||| || || || || || ||||||||||||
Sbjct: 195 ggcgagatagatcgggtgctgaagaaggttcaagaaggtgttgatgttttcgacagcatc 254

                                                                       
Query: 162 tggaacaaggtctacgacaccgagaatgcgaaccagaaggagaagttcgaggccgacctc 221
           ||||||||||| || || || || ||||  || || ||||| ||||| ||||| ||| | 
Sbjct: 255 tggaacaaggtatatgatacagacaatgttaatcaaaaggaaaagtttgaggcggacttg 314

                                                                       
Query: 222 aagaaggagatcaagaagctgcagcgc-taccgggaccagatcaagacctggatccagtc 280
           |||||||| |||||||||||||||||  ||  | |||||||||||||| ||||| |||||
Sbjct: 315 aagaaggaaatcaagaagctgcagcgggtatagagaccagatcaagacatggattcagtc 374

                                
Query: 281 cagcgagatcaaggacaagaa 301
            || |||||||| || |||||
Sbjct: 375 tagtgagatcaaagataagaa 395
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>gb|AC167711.1| Medicago truncatula chromosome 7 BAC clone mth2-167p21, complete sequence
          Length = 132340

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                          
Query: 186    aatgcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcag 245
              ||||| || ||||||||||| || || || || |||||||||||||| ||||||||||||
Sbjct: 107384 aatgctaatcagaaggagaaatttgaagctgatctcaagaaggagattaagaagctgcag 107325

                                                                        
Query: 246    cgctaccgggaccagatcaagacctggatccagtccagcgagatcaaggacaagaagg 303
               | || || || ||||| ||||| ||||| || ||||| ||||||||||| |||||||
Sbjct: 107324 aggtatcgagatcagattaagacttggattcaatccagtgagatcaaggataagaagg 107267



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                          
Query: 312    gatgcccgcaagcagattgagcgcgagatggaacgatttaaggtctgtgagaaggaaact 371
              ||||| || |||| |||||| || || |||||| |||||||| | |||||||||||||| 
Sbjct: 106430 gatgcgcggaagctgattgaacgggaaatggaaagatttaagatatgtgagaaggaaaca 106371

                                        
Query: 372    aaaaccaaggccttctcgaaagaagg 397
              || ||||| || ||||| ||||||||
Sbjct: 106370 aagaccaaagcattctccaaagaagg 106345



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 120    ctcaagaaggttcaggagggcgtcgacgtcttcgacagcatctggaacaaggt 172
              |||||||||||||| || || || || || |||||||| ||||||||||||||
Sbjct: 107564 ctcaagaaggttcaagaaggtgttgaagtgttcgacagtatctggaacaaggt 107512
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>dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRG7
          Length = 83948

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                         
Query: 198   aaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgctaccgggac 257
             ||||| ||||| ||||| ||| | |||||||| ||||||||||||||||| ||  | |||
Sbjct: 49988 aaggaaaagtttgaggcggacttgaagaaggaaatcaagaagctgcagcggtatagagac 49929

                                                         
Query: 258   cagatcaagacctggatccagtccagcgagatcaaggacaagaa 301
             ||||||||||| ||||| ||||| || |||||||| || |||||
Sbjct: 49928 cagatcaagacatggattcagtctagtgagatcaaagataagaa 49885



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 102   ggcgagatcgaccgcgtgctcaagaaggttcaggagggcgtcgacgtcttcgacagcatc 161
             |||||||| || || ||||| ||||||||||| || || || || || ||||||||||||
Sbjct: 50513 ggcgagatagatcgggtgctgaagaaggttcaagaaggtgttgatgttttcgacagcatc 50454

                        
Query: 162   tggaacaaggt 172
             |||||||||||
Sbjct: 50453 tggaacaaggt 50443
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>emb|BX934282.2| Gallus gallus finished cDNA, clone ChEST664c2
          Length = 645

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 192 aaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcag 245
           ||||||||||| ||||  ||||| ||||| |||||||||||||| |||||||||
Sbjct: 298 aaccagaaggaaaagtatgaggctgacctgaagaaggagatcaaaaagctgcag 351



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 91  ggaagctgcagggcgagatcgaccgcgtgctcaagaaggt 130
           |||||||||| ||||| |||||||||   |||||||||||
Sbjct: 197 ggaagctgcaaggcgaaatcgaccgctgcctcaagaaggt 236
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>emb|CR353749.1| Gallus gallus finished cDNA, clone ChEST927a10
          Length = 639

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 192 aaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcag 245
           ||||||||||| ||||  ||||| ||||| |||||||||||||| |||||||||
Sbjct: 292 aaccagaaggaaaagtatgaggctgacctgaagaaggagatcaaaaagctgcag 345



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 91  ggaagctgcagggcgagatcgaccgcgtgctcaagaaggt 130
           |||||||||| ||||| |||||||||   |||||||||||
Sbjct: 191 ggaagctgcaaggcgaaatcgaccgctgcctcaagaaggt 230
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>ref|XM_512885.1| PREDICTED: Pan troglodytes CCR4-NOT transcription complex, subunit
           3 (LOC456279), mRNA
          Length = 2474

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Plus

                                                                       
Query: 192 aaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgctac 251
           |||||||| || ||||  ||||| ||||| ||||||||||| |||||||| || ||    
Sbjct: 411 aaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctg 470

                                                            
Query: 252 cgggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
            |||||||||||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 471 agggaccagatcaagacatgggtagcgtccaacgagatcaaggacaaga 519
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>ref|XM_965414.1| PREDICTED: Tribolium castaneum similar to CCR4-NOT transcription
           complex, subunit 3 (LOC659082), mRNA
          Length = 2220

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 192 aaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgca 244
           |||||||| ||||| | ||| ||||| |||||||||||||| |||||||||||
Sbjct: 316 aaccagaaagagaaatacgaagccgatctcaagaaggagattaagaagctgca 368
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>ref|NM_014516.2| Homo sapiens CCR4-NOT transcription complex, subunit 3 (CNOT3),
           mRNA
          Length = 2855

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 91/112 (81%)
 Strand = Plus / Plus

                                                                       
Query: 189 gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgc 248
           ||||||||||| || ||||  ||||| ||||| ||||||||||| |||||||| || || 
Sbjct: 423 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacgg 482

                                                               
Query: 249 taccgggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
               ||||||| |||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 483 ctgagggaccaaatcaagacatgggtagcgtccaacgagatcaaggacaaga 534
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>ref|XM_605695.2| PREDICTED: Bos taurus similar to CCR4-NOT transcription complex
           subunit 3 (CCR4-associated factor 3) (LOC527305), mRNA
          Length = 2327

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 91/112 (81%)
 Strand = Plus / Plus

                                                                       
Query: 189 gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgc 248
           ||||||||||| || ||||  ||||| || || ||||||||||| |||||||| || || 
Sbjct: 156 gcgaaccagaaagaaaagtatgaggctgatctaaagaaggagattaagaagcttcaacgg 215

                                                               
Query: 249 taccgggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
               |||||||||||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 216 ctgagggaccagatcaagacatgggtagcgtccaacgagatcaaggacaaga 267
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>gb|BC016474.1| Homo sapiens CCR4-NOT transcription complex, subunit 3, mRNA (cDNA
           clone MGC:17152 IMAGE:4181383), complete cds
          Length = 2831

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 91/112 (81%)
 Strand = Plus / Plus

                                                                       
Query: 189 gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgc 248
           ||||||||||| || ||||  ||||| ||||| ||||||||||| |||||||| || || 
Sbjct: 389 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacgg 448

                                                               
Query: 249 taccgggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
               ||||||| |||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 449 ctgagggaccaaatcaagacatgggtagcgtccaacgagatcaaggacaaga 500
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>dbj|AK160386.1| Homo sapiens mRNA for FLJ00420 protein
          Length = 4512

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 91/112 (81%)
 Strand = Plus / Plus

                                                                       
Query: 189 gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgc 248
           ||||||||||| || ||||  ||||| ||||| ||||||||||| |||||||| || || 
Sbjct: 369 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacgg 428

                                                               
Query: 249 taccgggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
               ||||||| |||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 429 ctgagggaccaaatcaagacatgggtagcgtccaacgagatcaaggacaaga 480
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>dbj|AB014591.1| Homo sapiens mRNA for KIAA0691 protein, partial cds
          Length = 4133

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 91/112 (81%)
 Strand = Plus / Plus

                                                                        
Query: 189  gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgc 248
            ||||||||||| || ||||  ||||| ||||| ||||||||||| |||||||| || || 
Sbjct: 1710 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacgg 1769

                                                                
Query: 249  taccgggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
                ||||||| |||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 1770 ctgagggaccaaatcaagacatgggtagcgtccaacgagatcaaggacaaga 1821
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>gb|AF180474.1|AF180474 Homo sapiens Not3p (NOT3) mRNA, complete cds
          Length = 2142

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 91/112 (81%)
 Strand = Plus / Plus

                                                                       
Query: 189 gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcgc 248
           ||||||||||| || ||||  ||||| ||||| ||||||||||| |||||||| || || 
Sbjct: 162 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacgg 221

                                                               
Query: 249 taccgggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
               ||||||| |||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 222 ctgagggaccaaatcaagacatgggtagcgtccaacgagatcaaggacaaga 273
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>emb|CT032980.1| Platynereis dumerilii EST IB0AAA28CB11EM1
          Length = 918

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 192 aaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagctgcagcg 247
           ||||||||||||||||  || ||||| ||||| ||||| |||||||| ||||||||
Sbjct: 255 aaccagaaggagaagtatgaagccgatctcaaaaaggaaatcaagaaactgcagcg 310
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>ref|XM_503626.1| Yarrowia lipolytica CLIB122, YALI0E06435g predicted mRNA
          Length = 1881

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                       
Query: 228 gagatcaagaagctgcagcgctaccgggaccagatcaagacctggatccagtccagcgag 287
           |||||||| ||||||||||| |  || |||||||||||||| |||||    |||| ||| 
Sbjct: 148 gagatcaaaaagctgcagcgattacgagaccagatcaagacatggatgggttccaacgac 207

                          
Query: 288 atcaaggacaagaag 302
           |||||||||||||||
Sbjct: 208 atcaaggacaagaag 222
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                          
Query: 228    gagatcaagaagctgcagcgctaccgggaccagatcaagacctggatccagtccagcgag 287
              |||||||| ||||||||||| |  || |||||||||||||| |||||    |||| ||| 
Sbjct: 731962 gagatcaaaaagctgcagcgattacgagaccagatcaagacatggatgggttccaacgac 731903

                             
Query: 288    atcaaggacaagaag 302
              |||||||||||||||
Sbjct: 731902 atcaaggacaagaag 731888



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 223     agaaggagatcaagaagctgcagc 246
               |||||||| |||||||||||||||
Sbjct: 4085630 agaaggagttcaagaagctgcagc 4085653
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>gb|BC053437.1| Mus musculus CCR4-NOT transcription complex, subunit 3, mRNA (cDNA
           clone MGC:59466 IMAGE:6394085), complete cds
          Length = 2767

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 189 gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
           ||||||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 239 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 291
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>gb|BC030332.1| Mus musculus CCR4-NOT transcription complex, subunit 3, mRNA (cDNA
           clone MGC:40675 IMAGE:5400871), complete cds
          Length = 2849

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 189 gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
           ||||||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 407 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 459
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>gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 243051

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 189    gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
              ||||||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 243016 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 242964
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>ref|XM_806046.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053504045.5) partial mRNA
          Length = 192

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 219 ctcaagaaggagatcaagaagctgcagcg 247
           |||||||||||||||||||| ||||||||
Sbjct: 142 ctcaagaaggagatcaagaaactgcagcg 170
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>gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 199047

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                   
Query: 189    gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
              ||||||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 137107 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 137159
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>gb|AC130680.13| Mus musculus chromosome 7, clone RP23-180G17, complete sequence
          Length = 136680

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 189   gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
             ||||||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 68218 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 68270
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>dbj|AK141718.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030040O10 product:CCR4-NOT
           transcription complex, subunit 3, full insert sequence
          Length = 2964

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 189 gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
           ||||||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 458 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 510
to top
>gb|AC012314.8| Homo sapiens chromosome 19 clone CTD-3093M3, complete sequence
          Length = 198017

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                   
Query: 189    gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
              ||||||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 120695 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 120747



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                              
Query: 253    gggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
              ||||||| |||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 120902 gggaccaaatcaagacatgggtagcgtccaacgagatcaaggacaaga 120949
to top
>ref|XM_218187.3| PREDICTED: Rattus norvegicus CCR4-NOT transcription complex,
           subunit 3 (predicted) (Cnot3_predicted), mRNA
          Length = 2822

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 189 gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
           ||||||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 404 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 456
to top
>gb|AC171680.5| Mus musculus chromosome 7, clone RP23-146B24, complete sequence
          Length = 200031

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 189   gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
             ||||||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 64619 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 64671
to top
>ref|NM_146176.1| Mus musculus CCR4-NOT transcription complex, subunit 3 (Cnot3),
           mRNA
          Length = 2849

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 189 gcgaaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
           ||||||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 407 gcgaaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 459
to top
>gb|AC163770.3| Pan troglodytes BAC clone CH251-4E4 from chromosome unknown, complete
              sequence
          Length = 210071

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                              
Query: 253    gggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
              |||||||||||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 127183 gggaccagatcaagacatgggtagcgtccaacgagatcaaggacaaga 127136



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 192    aaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
              |||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 127387 aaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 127338
to top
>gb|AC163764.4| Pan troglodytes BAC clone CH251-169M18 from chromosome unknown, complete
              sequence
          Length = 195947

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 253    gggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
              |||||||||||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 177309 gggaccagatcaagacatgggtagcgtccaacgagatcaaggacaaga 177356



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 192    aaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
              |||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 177105 aaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 177154
to top
>gb|AC156839.4| Pan troglodytes BAC clone CH251-349M12 from chromosome unknown,
             complete sequence
          Length = 190719

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 253   gggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
             |||||||||||||||| ||| |   ||||| |||||||||||||||||
Sbjct: 58291 gggaccagatcaagacatgggtagcgtccaacgagatcaaggacaaga 58244



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 192   aaccagaaggagaagttcgaggccgacctcaagaaggagatcaagaagct 241
             |||||||| || ||||  ||||| ||||| ||||||||||| ||||||||
Sbjct: 58495 aaccagaaagaaaagtatgaggctgacctaaagaaggagattaagaagct 58446
to top
>gb|AF296835.1|T8M17 Arabidopsis thaliana BAC T8M17
          Length = 114695

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 258   cagatcaagacctggatccagtccagcgagatcaaggacaagaa 301
             ||||||||||| ||||| |||||||| |||||||| || |||||
Sbjct: 35930 cagatcaagacatggattcagtccagtgagatcaaagataagaa 35973
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 97      tgcagggcgagatcgaccgcgtg 119
               |||||||||||||||||||||||
Sbjct: 1553742 tgcagggcgagatcgaccgcgtg 1553764
to top
>gb|DQ127560.1| Emiliania huxleyi virus 163 clone mike228.seq partial sequence
          Length = 4345

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 222  aagaaggagatcaagaagctgc 243
            ||||||||||||||||||||||
Sbjct: 1492 aagaaggagatcaagaagctgc 1513
to top
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86
          Length = 407339

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 222    aagaaggagatcaagaagctgc 243
              ||||||||||||||||||||||
Sbjct: 283645 aagaaggagatcaagaagctgc 283666
to top
>ref|XM_362518.1| Magnaporthe grisea 70-15 hypothetical protein (MG08101.4) partial
           mRNA
          Length = 1998

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 219 ctcaagaaggagatcaagaagctgcagcg 247
           |||||||  ||||||||||||||||||||
Sbjct: 139 ctcaagagagagatcaagaagctgcagcg 167
to top
>gb|AC139569.3| Mus musculus BAC clone RP24-340F13 from chromosome 14, complete sequence
          Length = 173736

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 252    cgggaccagatcaagacctggatcc 276
              ||||| |||||||||||||||||||
Sbjct: 118740 cgggaacagatcaagacctggatcc 118716
to top
>emb|CR847503.8| Zebrafish DNA sequence from clone DKEY-20D21 in linkage group 8, complete
              sequence
          Length = 217514

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 223    agaaggagatcaagaagctgc 243
              |||||||||||||||||||||
Sbjct: 199961 agaaggagatcaagaagctgc 199941
to top
>gb|AC162183.4| Mus musculus BAC clone RP23-27I10 from chromosome 14, complete
            sequence
          Length = 225212

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 252  cgggaccagatcaagacctggatcc 276
            ||||| |||||||||||||||||||
Sbjct: 1563 cgggaacagatcaagacctggatcc 1539
to top
>ref|XM_694579.1| PREDICTED: Danio rerio similar to cadherin EGF LAG seven-pass G-type
            receptor 3 (LOC571026), mRNA
          Length = 10326

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 223  agaaggagatcaagaagctgc 243
            |||||||||||||||||||||
Sbjct: 8864 agaaggagatcaagaagctgc 8884
to top
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete
             cds
          Length = 77457

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   aggagggcgtcgacgtcttcg 153
             |||||||||||||||||||||
Sbjct: 39159 aggagggcgtcgacgtcttcg 39179
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>gb|AF207765.1|AF207765 Hepatitis C virus strain MD24 complete genome
          Length = 9379

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 262  tcaagacctggatccagtcca 282
            |||||||||||||||||||||
Sbjct: 6301 tcaagacctggatccagtcca 6321
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>gb|AC149407.2| Phakopsora pachyrhizi clone JGIAFNA-69I13, complete sequence
          Length = 37218

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   cctcctcctcctccccaatc 52
            ||||||||||||||||||||
Sbjct: 7463 cctcctcctcctccccaatc 7444
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>gb|AC149394.2| Phakopsora pachyrhizi clone JGIAFNA-61H10, complete sequence
          Length = 39352

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    cctcctcctcctccccaatc 52
             ||||||||||||||||||||
Sbjct: 15219 cctcctcctcctccccaatc 15200
to top
>gb|AE010359.1| Methanopyrus kandleri AV19 section 58 of 157 of the complete genome
          Length = 11422

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  agcgctaccgggaccagatc 263
            ||||||||||||||||||||
Sbjct: 3375 agcgctaccgggaccagatc 3394
to top
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    cctcctcctcctccccaatc 52
             ||||||||||||||||||||
Sbjct: 32403 cctcctcctcctccccaatc 32422
to top
>gb|AC149414.1| Phakopsora pachyrhizi clone JGIAFNA-77J10, complete sequence
          Length = 35913

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    cctcctcctcctccccaatc 52
             ||||||||||||||||||||
Sbjct: 29471 cctcctcctcctccccaatc 29452
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>ref|NM_023547.1| Mus musculus zinc finger, HIT type 4 (Znhit4), mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 457 gacctcaagaaggagatcaa 476
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     agctgcagggcgagatcgac 113
              ||||||||||||||||||||
Sbjct: 660790 agctgcagggcgagatcgac 660771
to top
>gb|BC058788.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA clone MGC:65219
           IMAGE:6440887), complete cds
          Length = 1161

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 503 gacctcaagaaggagatcaa 522
to top
>gb|BC019383.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA clone MGC:30535
           IMAGE:5010975), complete cds
          Length = 1155

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 491 gacctcaagaaggagatcaa 510
to top
>gb|BC047990.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA clone
           IMAGE:6509498), partial cds
          Length = 1155

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 492 gacctcaagaaggagatcaa 511
to top
>gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 219634

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   gacctcaagaaggagatcaa 235
             ||||||||||||||||||||
Sbjct: 49870 gacctcaagaaggagatcaa 49851
to top
>ref|XM_368968.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00276.4) partial mRNA
          Length = 1545

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 ttcaggagggcgtcgacgtc 149
           ||||||||||||||||||||
Sbjct: 911 ttcaggagggcgtcgacgtc 930
to top
>ref|NM_031288.2| Homo sapiens zinc finger, HIT type 4 (ZNHIT4), mRNA
          Length = 1217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 541 gacctcaagaaggagatcaa 560
to top
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    aagaaggagatcaagaagct 241
              ||||||||||||||||||||
Sbjct: 933488 aagaaggagatcaagaagct 933469
to top
>gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence
          Length = 314335

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    agaaggagatcaagaagctg 242
              ||||||||||||||||||||
Sbjct: 308104 agaaggagatcaagaagctg 308123
to top
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0018K15, complete sequence
          Length = 168519

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    ccctcctcctcctccccaat 51
             ||||||||||||||||||||
Sbjct: 65808 ccctcctcctcctccccaat 65827
to top
>gb|BC064425.1| Homo sapiens zinc finger, HIT type 4, mRNA (cDNA clone MGC:70669
           IMAGE:5760624), complete cds
          Length = 1182

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 497 gacctcaagaaggagatcaa 516
to top
>gb|BC050666.2| Homo sapiens zinc finger, HIT type 4, mRNA (cDNA clone MGC:60188
           IMAGE:6527060), complete cds
          Length = 1164

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 492 gacctcaagaaggagatcaa 511
to top
>gb|BC039617.1| Homo sapiens zinc finger, HIT type 4, mRNA (cDNA clone
           IMAGE:5770045)
          Length = 982

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 507 gacctcaagaaggagatcaa 526
to top
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence
          Length = 357655

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 215    cgacctcaagaaggagatcaagaa 238
              ||||||| ||||||||||||||||
Sbjct: 170212 cgacctccagaaggagatcaagaa 170235
to top
>ref|XM_757449.1| Ustilago maydis 521 hypothetical protein (UM06395.1) partial mRNA
          Length = 2208

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 216 gacctcaagaaggagatcaagaagctgcagcg 247
           ||||||||||   |||||||||||||||||||
Sbjct: 136 gacctcaagacacagatcaagaagctgcagcg 167
to top
>gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, complete sequence
          Length = 215781

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ccggaagctgcagggcgaga 108
              ||||||||||||||||||||
Sbjct: 150934 ccggaagctgcagggcgaga 150915
to top
>ref|XM_857733.1| PREDICTED: Canis familiaris similar to CCR4-NOT transcription
           complex, subunit 3, transcript variant 5 (LOC484312),
           mRNA
          Length = 2168

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 253 gggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
           |||||||||||||||| ||| |    |||| |||||||||||||||||
Sbjct: 487 gggaccagatcaagacatgggtagcatccaacgagatcaaggacaaga 534
to top
>ref|XM_857708.1| PREDICTED: Canis familiaris similar to CCR4-NOT transcription
           complex, subunit 3, transcript variant 4 (LOC484312),
           mRNA
          Length = 2504

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 253 gggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
           |||||||||||||||| ||| |    |||| |||||||||||||||||
Sbjct: 487 gggaccagatcaagacatgggtagcatccaacgagatcaaggacaaga 534
to top
>ref|XM_857684.1| PREDICTED: Canis familiaris similar to CCR4-NOT transcription
           complex, subunit 3, transcript variant 3 (LOC484312),
           mRNA
          Length = 1250

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 253 gggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
           |||||||||||||||| ||| |    |||| |||||||||||||||||
Sbjct: 487 gggaccagatcaagacatgggtagcatccaacgagatcaaggacaaga 534
to top
>ref|XM_541428.2| PREDICTED: Canis familiaris similar to CCR4-NOT transcription
           complex, subunit 3, transcript variant 1 (LOC484312),
           mRNA
          Length = 2570

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 253 gggaccagatcaagacctggatccagtccagcgagatcaaggacaaga 300
           |||||||||||||||| ||| |    |||| |||||||||||||||||
Sbjct: 487 gggaccagatcaagacatgggtagcatccaacgagatcaaggacaaga 534
to top
>ref|XM_504771.1| Yarrowia lipolytica CLIB122, YALI0E34397g predicted mRNA
          Length = 1479

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 223 agaaggagatcaagaagctgcagc 246
           |||||||| |||||||||||||||
Sbjct: 404 agaaggagttcaagaagctgcagc 427
to top
>emb|AL136136.7| Human DNA sequence from clone RP11-141E20 on chromosome 1q31.2-31.3
              Contains GSSs and STSs, complete sequence
          Length = 146158

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 183    gagaatgcgaaccagaaggagaag 206
              ||||||| ||||||||||||||||
Sbjct: 125705 gagaatgagaaccagaaggagaag 125728
to top
>ref|XM_795335.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC587087 (LOC587087), mRNA
          Length = 1596

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 33  cctcctcctcctccccaatc 52
           ||||||||||||||||||||
Sbjct: 397 cctcctcctcctccccaatc 378
to top
>ref|XM_775255.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal
           protein L36 (LOC574853), mRNA
          Length = 608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 caaggacaagaaggctctca 309
           ||||||||||||||||||||
Sbjct: 189 caaggacaagaaggctctca 208
to top
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     tcgacgtcttcgacagcatc 161
               ||||||||||||||||||||
Sbjct: 4843256 tcgacgtcttcgacagcatc 4843237
to top
>emb|CR625948.1| full-length cDNA clone CS0CAP002YH01 of Thymus of Homo sapiens
           (human)
          Length = 1069

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 511 gacctcaagaaggagatcaa 530
to top
>emb|CR613137.1| full-length cDNA clone CS0DL003YN10 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1668

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 513 gacctcaagaaggagatcaa 532
to top
>emb|CR600070.1| full-length cDNA clone CS0DF034YL10 of Fetal brain of Homo sapiens
           (human)
          Length = 1014

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 506 gacctcaagaaggagatcaa 525
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>dbj|AK055333.1| Homo sapiens cDNA FLJ30771 fis, clone FEBRA2000740
          Length = 2042

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 527 gacctcaagaaggagatcaa 546
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>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete
              sequence
          Length = 139872

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    ggagatcaagaagctgcagc 246
              ||||||||||||||||||||
Sbjct: 122755 ggagatcaagaagctgcagc 122774
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>dbj|AK171909.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830019B22 product:serine/threonine kinase
            11, full insert sequence
          Length = 3664

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 210  gaggccgacctcaagaaggagatc 233
            |||||| |||||||||||||||||
Sbjct: 1089 gaggccaacctcaagaaggagatc 1112
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>dbj|AK010946.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:2510009I23 product:PAPA-1, full insert
           sequence
          Length = 1200

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 559 gacctcaagaaggagatcaa 578
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>gb|AY129332.1| Mycobacteriophage Bxz2, complete genome
          Length = 50913

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    agctgcagggcgagatcgac 113
             ||||||||||||||||||||
Sbjct: 29752 agctgcagggcgagatcgac 29733
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>dbj|AK084736.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330037D08 product:hypothetical protein,
           full insert sequence
          Length = 3108

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  ccggaagctgcagggcgaga 108
           ||||||||||||||||||||
Sbjct: 469 ccggaagctgcagggcgaga 488
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>gb|AC149356.2| Phakopsora pachyrhizi clone JGIAFNA-41F14, complete sequence
          Length = 38174

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   cctcctcctcctccccaatc 52
            ||||||||||||||||||||
Sbjct: 3578 cctcctcctcctccccaatc 3559
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 32       ccctcctcctcctccccaat 51
                ||||||||||||||||||||
Sbjct: 23380272 ccctcctcctcctccccaat 23380291



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 33       cctcctcctcctccccaatc 52
                ||||||||||||||||||||
Sbjct: 16533664 cctcctcctcctccccaatc 16533683
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>gb|AC010708.10|AC010708 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone
              BACR10E05, complete sequence
          Length = 188766

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    tcaagaaggagatcaagaag 239
              ||||||||||||||||||||
Sbjct: 177019 tcaagaaggagatcaagaag 177000
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>gb|AC012098.9|AC012098 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone
             BACR03K10, complete sequence
          Length = 188489

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   tcaagaaggagatcaagaag 239
             ||||||||||||||||||||
Sbjct: 92396 tcaagaaggagatcaagaag 92377
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>gb|AC005041.2|AC005041 Homo sapiens BAC clone RP11-523H20 from Ch2, complete sequence
          Length = 191356

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   gacctcaagaaggagatcaa 235
             ||||||||||||||||||||
Sbjct: 79071 gacctcaagaaggagatcaa 79052
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>ref|XM_575576.1| PREDICTED: Rattus norvegicus similar to PAP-1 binding protein
           (LOC500225), mRNA
          Length = 1667

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 839 gacctcaagaaggagatcaa 858
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>dbj|AK189382.1| Mus musculus cDNA, clone:Y0G0148P15, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000032109, based on BLAT search
          Length = 207

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 139 gacctcaagaaggagatcaa 158
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>dbj|AB054538.1| Homo sapiens mRNA for PAPA-1, complete cds
          Length = 1164

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 494 gacctcaagaaggagatcaa 513
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>dbj|AB054537.1| Mus musculus gene for PAPA-1, complete cds
          Length = 1237

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 gacctcaagaaggagatcaa 235
           ||||||||||||||||||||
Sbjct: 552 gacctcaagaaggagatcaa 571
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>emb|Y14428.1|MKY14428 Methanopyrus kandleri mtrE, mtrD, mtrC, mtrB, mtrA, mtrF, mtrG, mtrH
            genes
          Length = 6027

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  agcgctaccgggaccagatc 263
            ||||||||||||||||||||
Sbjct: 3281 agcgctaccgggaccagatc 3300
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>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete
             sequence
          Length = 315109

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   tcaagaaggagatcaagaag 239
             ||||||||||||||||||||
Sbjct: 16408 tcaagaaggagatcaagaag 16389
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>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete
              sequence
          Length = 193277

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    gacctcaagaaggagatcaa 235
              ||||||||||||||||||||
Sbjct: 160579 gacctcaagaaggagatcaa 160560
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     tctggaacaaggtctacgac 179
               ||||||||||||||||||||
Sbjct: 1659819 tctggaacaaggtctacgac 1659838
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>emb|AL845305.5| Mouse DNA sequence from clone RP23-202K13 on chromosome 2, complete
             sequence
          Length = 200141

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   agaaggaaactaaaaccaag 380
             ||||||||||||||||||||
Sbjct: 52121 agaaggaaactaaaaccaag 52140
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>dbj|AP003775.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-206H19, complete
             sequences
          Length = 179680

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 288   atcaaggacaagaaggctctcatg 311
             ||||||||||||||||||| ||||
Sbjct: 69134 atcaaggacaagaaggctcccatg 69111


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,892,357
Number of Sequences: 3902068
Number of extensions: 4892357
Number of successful extensions: 408524
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 406636
Number of HSP's gapped (non-prelim): 1886
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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