>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)|
           (dRING protein) (Sex comb extra protein)
          Length = 435

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +3

Query: 186 DKAHRDVSPAGKDRSGAFKTASNQFPSQIEDKQRDSQQRRSSPTKRSNSPTNRSGMSPV 362
           D+ +RD   +G   + A  +ASN  PS   +    +   R      SN P+ RS  SPV
Sbjct: 213 DRENRDPGHSGTSAASAITSASNAAPSSSANSGASTSATRMQVDDASNPPSVRSTPSPV 271

>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 18/72 (25%), Positives = 30/72 (41%)
 Frame = +3

Query: 147 PPLLPPCPTKMLTDKAHRDVSPAGKDRSGAFKTASNQFPSQIEDKQRDSQQRRSSPTKRS 326
           PP    C TK      H D +P  K ++   KT + +  + +      + +  S+P    
Sbjct: 274 PPTTTSC-TKEKPTPPHHDTTPCTKKKTTTSKTCTKKTTTPVPTPSSSTTESSSAPVPTP 332

Query: 327 NSPTNRSGMSPV 362
           +S T  S  +PV
Sbjct: 333 SSSTTESSSAPV 344

>CDC20_YEAST (P26309) APC/C activator protein CDC20 (Cell division control|
           protein 20)
          Length = 610

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 124 CSSAVQTRRLFYLPVPPRCSPTRRTETFLRRVRTGAALSRRQAISSRLRL-KIN 282
           C   +  R L Y+P PP+CS  R+ ++++ + RT  +  + Q I   ++L KIN
Sbjct: 194 CGLDMNKRILQYMPEPPKCSSLRQ-KSYIMKKRTHYSYQQEQKIPDLIKLRKIN 246

>IF2_CHLAB (Q5L627) Translation initiation factor IF-2|
          Length = 874

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 198 RDVSPAGKDRSGAFKTASNQFPSQIEDKQRDSQQRRSSPTKRSNS 332
           ++  PA K+R+G  +T   Q      DKQ  S  R+S P  R ++
Sbjct: 188 KEDKPAPKERTGTVQTKPQQSSEVPSDKQHSSNNRQSQPFYRRDT 232

>MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domains 8 (EGF-like|
            domain-containing protein 4) (Multiple EGF-like domain
            protein 4)
          Length = 2330

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 29/104 (27%), Positives = 35/104 (33%)
 Frame = +1

Query: 94   CGHCHALLPRCSSAVQTRRLFYLPVPPRCSPTRRTETFLRRVRTGAALSRRQAISSRLRL 273
            C  CH     C S  Q  RL    VPP CSP  R+    RR+RT +              
Sbjct: 1377 CTWCHGA---CLSGDQAHRLG-CGVPP-CSPMPRSPEECRRLRTCSE------------- 1418

Query: 274  KINREIVSKEGALQQRDQTRPPTDLACHPSRCSWSRTCGEKGCL 405
                        L +  +T  P D      RC W   C E  C+
Sbjct: 1419 -----------CLARHPRTLQPGDGEASIPRCKWCTNCPEGACI 1451

>RSP40_ARATH (P92965) Arginine/serine-rich splicing factor RSP40|
          Length = 350

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
 Frame = +3

Query: 198 RDVSPAGKDRSGAFKTASNQFPSQIEDKQ-RDSQQRR---SSPTKRSNSPTN-RSGMSPV 362
           R  SP  K R G+        P    D++  DS +RR   +SPTK S SP N R  MSP 
Sbjct: 229 RSPSPYKKSRRGS--------PEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPN 280

Query: 363 KMLMEQDMWREGVPDDE 413
               +++  R GV + E
Sbjct: 281 HSPFKKESPRNGVGEVE 297

>ZBT10_RAT (Q9WTY8) Zinc finger and BTB domain-containing protein 10 (Zinc|
           finger protein RIN ZF)
          Length = 836

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 298 KEGALQQRDQTRPPTDLACHPSRCSWSRTCG 390
           + G+ QQ  Q+RPP DL   P    W+R  G
Sbjct: 69  RRGSRQQWQQSRPPGDLGVAPQAFQWARAGG 99

>TLE1_MOUSE (Q62440) Transducin-like enhancer protein 1 (Groucho-related|
           protein 1) (Grg-1)
          Length = 770

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +3

Query: 219 KDRSGA-FKTASNQFPSQIEDKQRDSQQRRSSPTKRSNSPTNRSGM 353
           KD SG+   TAS+   S ++ K+    ++ ++P  +S++PT RS M
Sbjct: 279 KDASGSPASTASSGSSSSLKSKEVSLHEKANTPVLKSSTPTPRSDM 324

>KU70_HUMAN (P12956) ATP-dependent DNA helicase 2 subunit 1 (EC 3.6.1.-)|
           (ATP-dependent DNA helicase II 70 kDa subunit) (Lupus Ku
           autoantigen protein p70) (Ku70) (70 kDa subunit of Ku
           antigen) (Thyroid-lupus autoantigen) (TLAA) (CTC
           box-binding factor 75
          Length = 608

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = +1

Query: 193 RTETFLRRVRTGAALSRRQAISSRLRLKINREIVSKEGA--LQQRDQTRPPTDL 348
           + E  LR+VR  A  +R++A+S RL+LK+N++IV   G   L Q+    PP  L
Sbjct: 237 KLEDLLRKVR--AKETRKRALS-RLKLKLNKDIVISVGIYNLVQKALKPPPIKL 287

>ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs)|
          Length = 1669

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +3

Query: 171 TKMLTDKAHRDVSPAGKDRSGAFKTASNQFPSQIEDKQRDSQQRRSSPTKRSNSPT 338
           TK  T  A   V+ A  D+S  F    +Q     E ++R  ++  SSP++R  +PT
Sbjct: 391 TKCETTSAKTTVAVAVADKSSTFPPTGSQNNVLNEQQRRVLKRPSSSPSQRKQAPT 446

>Y1590_HAEIN (P45262) Hypothetical protein HI1590|
          Length = 446

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 141 DAPPLLPPCPTKMLTDKAHRDVSPAGKDRSGAFKTASNQFPSQIEDKQ 284
           D PP L   PT ++ +  +        D   A+    N FP +++D Q
Sbjct: 366 DVPPHLRNAPTNLMKELGYGTEYRYAHDEPNAYAAGENYFPPELKDTQ 413

>YG49_SCHPO (O60184) Protein C23E6.09 in chromosome II|
          Length = 1102

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/74 (22%), Positives = 35/74 (47%)
 Frame = +3

Query: 159  PPCPTKMLTDKAHRDVSPAGKDRSGAFKTASNQFPSQIEDKQRDSQQRRSSPTKRSNSPT 338
            P      +++ +HR+ S +   +S   +T+++      +  QRDS ++  + T  S SP+
Sbjct: 838  PRSRNNSISNVSHRERSNSVSSKSRETRTSASNESDPKKSTQRDSSKKLENSTVVSGSPS 897

Query: 339  NRSGMSPVKMLMEQ 380
            + S     K +  Q
Sbjct: 898  SSSKSDAAKSIKPQ 911

>GLT10_CAEEL (O45947) Putative polypeptide N-acetylgalactosaminyltransferase 10|
           (EC 2.4.1.41) (Protein-UDP
           acetylgalactosaminyltransferase 10)
           (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 10) (pp-GaNTase 10)
          Length = 622

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
 Frame = +3

Query: 147 PPLLPP---------CPTKMLTDKAHRDVSPAGKDRSGAFKTASNQFPSQIEDKQRDSQQ 299
           PPLL P         CP   + D    +V P  +   G+F  A N     +  K R+S  
Sbjct: 263 PPLLDPIAEDYRTVVCPFVDVIDCETYEVRPQDEGARGSFDWAFNYKRLPLTKKDRES-- 320

Query: 300 RRSSPTKRSNSPTNRSG 350
               PTK  NSP    G
Sbjct: 321 ----PTKPFNSPVMAGG 333

>MRGA1_MOUSE (Q91WW5) Mas-related G-protein coupled receptor member A1 (RF-amide|
           G-protein coupled receptor)
          Length = 304

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -1

Query: 399 PLLSTCPAP*AS*RVTCQICWWASLISLLESSFFADYLSVYLQSETG 259
           P+   C  P  +  V C + W  SL+  + +S+F  +L+   ++E G
Sbjct: 115 PIWYHCHRPEHTSTVMCAVIWVLSLLICILNSYFCGFLNTQYKNENG 161

>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22|
          Length = 1010

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
 Frame = +3

Query: 198 RDVSPAGKDRSGAFKTASNQFPSQIEDKQRD--------SQQRRSSPTKRSNSPTNRSGM 353
           R  SP  +D S  +++   + PS    + R         S  R  SPT RS SP+ RS  
Sbjct: 41  RTPSPPSRDPS-PYRSPGERTPSPSPRRDRSLSPRDQPHSHPRSRSPTPRSQSPSRRSVR 99

Query: 354 SP 359
           SP
Sbjct: 100 SP 101

>TSH3_MOUSE (Q8CGV9) Teashirt homolog 3 (Zinc finger protein 537)|
          Length = 1081

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
 Frame = +3

Query: 153 LLPPCPTKMLTDKAHRDVSPAGKDRSGAFKTASNQFP---SQIEDKQRDSQQRRSSPTKR 323
           ++ P  T+ L        SP  K    A +    +     +++E+K ++ + + S P + 
Sbjct: 582 IVSPTKTQTLVSPPSSQTSPMPKTNFHAMEELVKKVTEKVAKVEEKMKEPEGKLSPPKRA 641

Query: 324 SNSPTNRSGMSPVKMLMEQD 383
           + SP +     P+KM    D
Sbjct: 642 TPSPCSSEQSEPIKMEASSD 661

>DNJA2_RAT (O35824) DnaJ homolog subfamily A member 2 (RDJ2)|
          Length = 412

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = -3

Query: 262 GN*LLAVLKAPLRSLPAGETSRCALSVSILV----GQGGRRGGASVLHCCSEVGV 110
           G  ++  LK  L  L  G+T++  LS ++L     GQGG+ G       C   GV
Sbjct: 113 GEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGV 167

>DNJA2_MOUSE (Q9QYJ0) DnaJ homolog subfamily A member 2 (mDj3)|
          Length = 412

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = -3

Query: 262 GN*LLAVLKAPLRSLPAGETSRCALSVSILV----GQGGRRGGASVLHCCSEVGV 110
           G  ++  LK  L  L  G+T++  LS ++L     GQGG+ G       C   GV
Sbjct: 113 GEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGV 167

>DNJA2_HUMAN (O60884) DnaJ homolog subfamily A member 2 (HIRA-interacting|
           protein 4) (Cell cycle progression restoration gene 3
           protein) (Dnj3) (NY-REN-14 antigen)
          Length = 412

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = -3

Query: 262 GN*LLAVLKAPLRSLPAGETSRCALSVSILV----GQGGRRGGASVLHCCSEVGV 110
           G  ++  LK  L  L  G+T++  LS ++L     GQGG+ G       C   GV
Sbjct: 113 GEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGV 167

>HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock protein 110)|
          Length = 886

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +3

Query: 222 DRSGAFKTAS----NQFPSQIEDKQRDSQQRRSSPTKRSNSPTNRS 347
           D  G FK +S     + P+Q ED   DS    + P+K   S  ++S
Sbjct: 483 DGHGIFKVSSASLIEKLPAQAEDAMEDSSPEENGPSKEEGSGASQS 528

>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like|
            domain-containing protein 4) (Multiple EGF-like domain
            protein 4)
          Length = 2386

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 27/104 (25%), Positives = 33/104 (31%)
 Frame = +1

Query: 94   CGHCHALLPRCSSAVQTRRLFYLPVPPRCSPTRRTETFLRRVRTGAALSRRQAISSRLRL 273
            C  CH     C S  Q  RL     P  CSP  R+    RR+RT +              
Sbjct: 1433 CTWCHGA---CLSGDQAHRLGCGGSP--CSPMPRSPEECRRLRTCSE------------- 1474

Query: 274  KINREIVSKEGALQQRDQTRPPTDLACHPSRCSWSRTCGEKGCL 405
                        L +  +T  P D      RC W   C E  C+
Sbjct: 1475 -----------CLARHPRTLQPGDGEASTPRCKWCTNCPEGACI 1507

>TLE1_HUMAN (Q04724) Transducin-like enhancer protein 1 (ESG1) (E(Sp1) homolog)|
          Length = 770

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 228 SGAFKTASNQFPSQIEDKQRDSQQRRSSPTKRSNSPTNRSGM 353
           S    TAS+   + ++ K+    ++ S+P  +S++PT RS M
Sbjct: 285 SSPASTASSASSTSLKSKEMSLHEKASTPVLKSSTPTPRSDM 326

>ADG3_SCHPO (O74851) Protein adg3 precursor|
          Length = 1131

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/74 (24%), Positives = 34/74 (45%)
 Frame = +3

Query: 171  TKMLTDKAHRDVSPAGKDRSGAFKTASNQFPSQIEDKQRDSQQRRSSPTKRSNSPTNRSG 350
            T  LT K    +S +    +    ++S+  PS    +        SS +KRS+S T+   
Sbjct: 974  TNSLTVKPESSLSSS---TTSGLTSSSSTIPSSTRSESNSESASTSSASKRSSSSTSLVQ 1030

Query: 351  MSPVKMLMEQDMWR 392
             +PVK ++  + ++
Sbjct: 1031 SNPVKTVVSLESYK 1044

>PRGR_HUMAN (P06401) Progesterone receptor (PR)|
          Length = 933

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +1

Query: 163 PVPPRCSPTRRTETFLRRVRTGAALSRRQAISSRLRLKINREIVSKEGALQQRDQTRPPT 342
           P+PPR +P+R  E  +      A++S   +  S L   + +     EGA  Q+    PP 
Sbjct: 424 PLPPRATPSRPGEAAVTAAPASASVSSASSSGSTLECILYK----AEGAPPQQGPFAPPP 479

Query: 343 DLACHPSRC 369
             A   S C
Sbjct: 480 CKAPGASGC 488

>FGD5_HUMAN (Q6ZNL6) FYVE, RhoGEF and PH domain-containing protein 5 (Zinc|
           finger FYVE domain-containing protein 23)
          Length = 1462

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 23/77 (29%), Positives = 37/77 (48%)
 Frame = +3

Query: 174 KMLTDKAHRDVSPAGKDRSGAFKTASNQFPSQIEDKQRDSQQRRSSPTKRSNSPTNRSGM 353
           K   +K H DV+ +    S     +S   PS+I +  R S    +SP  +S +   R+  
Sbjct: 663 KKTENKLHVDVNVSSSRSSSE---SSYHGPSRILEVDRRSLS--NSPQLKSRTGKLRASE 717

Query: 354 SPVKMLMEQDMWREGVP 404
           SP  ++  +D  R+GVP
Sbjct: 718 SPSSLIFYRDGKRKGVP 734


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,636,058
Number of Sequences: 219361
Number of extensions: 1092135
Number of successful extensions: 4090
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4083
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)