>HAM1_CLOTE (Q891I4) HAM1 protein homolog|
          Length = 201

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = +2

Query: 293 IKAIISELSLKVTNLKELPVKVDQIRKQLTMMSNVIMQIDTVY 421
           IK I+ EL+LKV +LKE+ + V+    +LT M N + +  T+Y
Sbjct: 17  IKDILCELNLKVVSLKEVGINVEVEEDELTFMGNALKKALTLY 59

>PTPR2_RAT (Q63475) Receptor-type tyrosine-protein phosphatase N2 precursor|
           (EC 3.1.3.48) (R-PTP-N2) (PTP NE-6) (PTPNE6) (Phogrin)
          Length = 1004

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = -3

Query: 242 PRPFELLDTCSRWPM----EQDSTHMPNERPV*SILMGSAAEPRGKKGAAGSAVGESKAN 75
           PRPF       RWP+     +DS  M ++  + S+L     + + +    GS   E +A+
Sbjct: 269 PRPFAAPALSQRWPLPPGDSKDSLSMGDDTLLRSLL--KDLQQQAEVDRLGSLKLEEQAD 326

Query: 74  *IGSACESDSCEGGR 30
            I  A +SD  EG +
Sbjct: 327 SIAGAIQSDPVEGSQ 341

>ATM_CRYNE (Q5KFE0) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase TEL1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2967

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +2

Query: 8   PSMYAVHNAPPRMNHSHKPSRFS*PCSRPLQIQQPPSFPSALLQSPSEL 154
           P+MY           S  P RF+         Q PP+FPS LL +P+ +
Sbjct: 816 PTMYDTPPQEEEAESSDPPKRFT---------QYPPTFPSTLLPTPTPI 855

>EX5A_BUCBP (Q89AB2) Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)|
          Length = 618

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/89 (20%), Positives = 40/89 (44%)
 Frame = +2

Query: 131 LLQSPSELITLVVHSXXXXXXXXXXTCYKCLEAQMAEAVLIAVTKIGSILGDEAIKAIIS 310
           L ++  ++ ++ +H           T +K   ++ +E VLI  T + SIL  E I   ++
Sbjct: 522 LPKNQEQIYSIPIHLVPEHQTNWTMTVHKSQGSEFSEVVLILPTIMTSILTKELIYTAVT 581

Query: 311 ELSLKVTNLKELPVKVDQIRKQLTMMSNV 397
               K+T   +  + +  ++K +   S +
Sbjct: 582 RSKKKLTIYSDENIFIKSLKKNIIRYSGL 610

>PA2_MEGPE (Q7M4I6) Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine|
           2-acylhydrolase)
          Length = 136

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
 Frame = -1

Query: 205 GLWSRTALTCRMNDQCDQF*WALQQSRGERRGLLD-LQWARARLTKSARLVRVIHARGGV 29
           GLW  T   CR +D C      + ++ G + GL +   + R            +H  G  
Sbjct: 22  GLWKETDACCRTHDMCPD----IIEAHGSKHGLTNPADYTRLNCECDEEFRHCLHNSGDA 77

Query: 28  VHGIHTGR 5
           V     GR
Sbjct: 78  VSAAFVGR 85

>RBS_PORAE (Q09125) Ribulose bisphosphate carboxylase small chain (EC|
           4.1.1.39) (RuBisCO small subunit)
          Length = 138

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
 Frame = +1

Query: 205 HLLQVSRSSNGRGCTYCC---------NEDWFHFRR*SHQGHHI*ALLKSY 330
           + ++V+   N RG   CC         NE  FH  R   QG +I   +KSY
Sbjct: 78  YYIKVNAFDNTRGVESCCLSFIINRPINEPGFHLERQEVQGRNILYTIKSY 128

>SAK1_SCHPO (P48383) Protein sak1|
          Length = 766

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 8   PSMYAVHNAPPRMNHSHKPSRF-S*PCSRPLQIQQP-PSFPSALLQSPSELI 157
           PS  +  N PP+++HS  PS       S+P    QP P F S+ +   S ++
Sbjct: 277 PSHLSQSNVPPQLSHSSVPSPAPPRSVSQPTYFSQPMPQFSSSFVPGTSSIV 328


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,658,055
Number of Sequences: 219361
Number of extensions: 1153694
Number of successful extensions: 3424
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3424
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)