Clone Name | bastl43b11 |
---|---|
Clone Library Name | barley_pub |
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 708 bits (357), Expect = 0.0 Identities = 360/361 (99%) Strand = Plus / Minus Query: 1 agcttaagcaggacacacatcttcttcccctccgagatccaaatcaccaaactgacagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5900 agcttaagcaggacacacatcttcttcccctccgagatccaaatcaccaaactgacagca 5841 Query: 61 gcccagatccacccaccccacctcacctctctcgcccccgccggtgggtttaggggcggc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5840 gcccagatccacccaccccacctcacctctctcgcccccgccggtgggtttaggggcggc 5781 Query: 121 cgccggagagggagggcggcggcgagacgagatgctgaccaagttcgagaccaagagcaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5780 cgccggagagggagggcggcggcgagacgagatgctgaccaagttcgagaccaagagcaa 5721 Query: 181 ccgggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5720 ccgggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacag 5661 Query: 241 cggggtcgtccagatgtgggactaccgcatgggcacccccctcgaccgcttcgacgagca 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5660 cggggtcgtccagatgtgggactaccgcatgggcaccctcctcgaccgcttcgacgagca 5601 Query: 301 cgacggccccgtacgcggcgtccacttccacaagacacagccgctcttcgtttccggagg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5600 cgacggccccgtacgcggcgtccacttccacaagacacagccgctcttcgtttccggagg 5541 Query: 361 t 361 | Sbjct: 5540 t 5540
>dbj|AK103786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I16, full insert sequence Length = 4284 Score = 299 bits (151), Expect = 3e-78 Identities = 205/223 (91%) Strand = Plus / Plus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 227 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 286 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 287 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 346 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 347 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 406 Query: 330 acaagacacagccgctcttcgtttccggaggtgacgattacaa 372 || || |||||||||||||| ||||||||||| |||||||| Sbjct: 407 acgccacccagccgctcttcgtctccggaggtgatgattacaa 449
>dbj|AK100467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J01, full insert sequence Length = 2535 Score = 299 bits (151), Expect = 3e-78 Identities = 205/223 (91%) Strand = Plus / Minus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 1285 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 1226 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1225 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 1166 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1165 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 1106 Query: 330 acaagacacagccgctcttcgtttccggaggtgacgattacaa 372 || || |||||||||||||| ||||||||||| |||||||| Sbjct: 1105 acgccacccagccgctcttcgtctccggaggtgatgattacaa 1063
>dbj|AK100286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075G08, full insert sequence Length = 4221 Score = 299 bits (151), Expect = 3e-78 Identities = 205/223 (91%) Strand = Plus / Plus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 143 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 202 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 203 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 262 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 263 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 322 Query: 330 acaagacacagccgctcttcgtttccggaggtgacgattacaa 372 || || |||||||||||||| ||||||||||| |||||||| Sbjct: 323 acgccacgcagccgctcttcgtctccggaggtgatgattacaa 365
>ref|XM_469514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3657 Score = 295 bits (149), Expect = 5e-77 Identities = 203/221 (91%) Strand = Plus / Plus Query: 152 atgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgcgg 211 |||||||||||||||||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 1 atgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgcgg 60 Query: 212 cgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatg 271 || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61 cggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgcatg 120 Query: 272 ggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttccac 331 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 ggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccac 180 Query: 332 aagacacagccgctcttcgtttccggaggtgacgattacaa 372 || |||||||||||||| ||||||||||| |||||||| Sbjct: 181 gccacgcagccgctcttcgtctccggaggtgatgattacaa 221
>ref|XM_469513.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3657 Score = 295 bits (149), Expect = 5e-77 Identities = 203/221 (91%) Strand = Plus / Plus Query: 152 atgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgcgg 211 |||||||||||||||||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 1 atgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgcgg 60 Query: 212 cgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgcatg 271 || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61 cggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgcatg 120 Query: 272 ggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttccac 331 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 ggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccac 180 Query: 332 aagacacagccgctcttcgtttccggaggtgacgattacaa 372 || |||||||||||||| ||||||||||| |||||||| Sbjct: 181 gccacgcagccgctcttcgtctccggaggtgatgattacaa 221
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 289 bits (146), Expect = 3e-75 Identities = 197/214 (92%) Strand = Plus / Minus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 28441262 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 28441203 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28441202 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 28441143 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28441142 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 28441083 Query: 330 acaagacacagccgctcttcgtttccggaggtga 363 || || |||||||||||||| ||||||||||| Sbjct: 28441082 acgccacgcagccgctcttcgtctccggaggtga 28441049 Score = 285 bits (144), Expect = 5e-74 Identities = 195/212 (91%) Strand = Plus / Minus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 28429642 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 28429583 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28429582 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 28429523 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28429522 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 28429463 Query: 330 acaagacacagccgctcttcgtttccggaggt 361 || || |||||||||||||| ||||||||| Sbjct: 28429462 acgccacgcagccgctcttcgtctccggaggt 28429431
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 289 bits (146), Expect = 3e-75 Identities = 197/214 (92%) Strand = Plus / Minus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 28532586 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 28532527 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28532526 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 28532467 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28532466 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 28532407 Query: 330 acaagacacagccgctcttcgtttccggaggtga 363 || || |||||||||||||| ||||||||||| Sbjct: 28532406 acgccacgcagccgctcttcgtctccggaggtga 28532373 Score = 285 bits (144), Expect = 5e-74 Identities = 195/212 (91%) Strand = Plus / Minus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 28520966 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 28520907 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28520906 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 28520847 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28520846 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 28520787 Query: 330 acaagacacagccgctcttcgtttccggaggt 361 || || |||||||||||||| ||||||||| Sbjct: 28520786 acgccacgcagccgctcttcgtctccggaggt 28520755
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 289 bits (146), Expect = 3e-75 Identities = 197/214 (92%) Strand = Plus / Minus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 35392 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 35333 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 35332 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 35273 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 35272 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 35213 Query: 330 acaagacacagccgctcttcgtttccggaggtga 363 || || |||||||||||||| ||||||||||| Sbjct: 35212 acgccacgcagccgctcttcgtctccggaggtga 35179 Score = 285 bits (144), Expect = 5e-74 Identities = 195/212 (91%) Strand = Plus / Minus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 23772 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 23713 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23712 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 23653 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 23652 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 23593 Query: 330 acaagacacagccgctcttcgtttccggaggt 361 || || |||||||||||||| ||||||||| Sbjct: 23592 acgccacgcagccgctcttcgtctccggaggt 23561
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 285 bits (144), Expect = 5e-74 Identities = 195/212 (91%) Strand = Plus / Minus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 2079192 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 2079133 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2079132 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 2079073 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2079072 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 2079013 Query: 330 acaagacacagccgctcttcgtttccggaggt 361 || || |||||||||||||| ||||||||| Sbjct: 2079012 acgccacccagccgctcttcgtctccggaggt 2078981
>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1610_C11 Length = 104553 Score = 285 bits (144), Expect = 5e-74 Identities = 195/212 (91%) Strand = Plus / Minus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 4609 agatgctgaccaagttcgagacgaagagcaaccgggtgaaggggctgagcttccacccgc 4550 Query: 210 ggcgcccatggatcctcgccagcctccacagcggggtcgtccagatgtgggactaccgca 269 |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4549 ggcggccatggatcctggccagcctccacagcggggtgatccagatgtgggactaccgca 4490 Query: 270 tgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgcggcgtccacttcc 329 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4489 tgggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttcc 4430 Query: 330 acaagacacagccgctcttcgtttccggaggt 361 || || |||||||||||||| ||||||||| Sbjct: 4429 acgccacccagccgctcttcgtctccggaggt 4398
>ref|XM_323673.1| Neurospora crassa OR74A hypothetical protein (NCU10066.1) partial mRNA Length = 3672 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 257 tgggactaccgcatgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgc 316 ||||||||||||||||| |||| | ||||| ||||| |||||||| |||||||| ||| Sbjct: 124 tgggactaccgcatgggtaccctgattgaccgattcgaagagcacgatggccccgtccgc 183 Query: 317 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaa 372 ||||| | ||||||||||||||||| |||||||| || || |||||||| ||||| Sbjct: 184 ggcgttgatttccacaagacacagcccctcttcgtatctggcggtgacgactacaa 239
>ref|XM_952788.1| Neurospora crassa OR74A hypothetical protein (NCU10066.1) partial mRNA Length = 3672 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 257 tgggactaccgcatgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgc 316 ||||||||||||||||| |||| | ||||| ||||| |||||||| |||||||| ||| Sbjct: 124 tgggactaccgcatgggtaccctgattgaccgattcgaagagcacgatggccccgtccgc 183 Query: 317 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaa 372 ||||| | ||||||||||||||||| |||||||| || || |||||||| ||||| Sbjct: 184 ggcgttgatttccacaagacacagcccctcttcgtatctggcggtgacgactacaa 239
>gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172175 Score = 71.9 bits (36), Expect = 1e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 183 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 242 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 75913 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 75972 Query: 243 gggtcgtccagatgtgggactaccgcatgggcacccccctcgaccgcttcgacgagcacg 302 | ||| ||||| ||||||||||||| ||| ||| | |||||| ||||||||||||| Sbjct: 75973 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 76032 Query: 303 acgg 306 |||| Sbjct: 76033 acgg 76036
>gb|AC105264.3| Drosophila melanogaster 3L BAC RP98-17K18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177583 Score = 71.9 bits (36), Expect = 1e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 183 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 242 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 33100 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 33041 Query: 243 gggtcgtccagatgtgggactaccgcatgggcacccccctcgaccgcttcgacgagcacg 302 | ||| ||||| ||||||||||||| ||| ||| | |||||| ||||||||||||| Sbjct: 33040 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 32981 Query: 303 acgg 306 |||| Sbjct: 32980 acgg 32977
>gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166862 Score = 71.9 bits (36), Expect = 1e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 183 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 242 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 118841 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 118782 Query: 243 gggtcgtccagatgtgggactaccgcatgggcacccccctcgaccgcttcgacgagcacg 302 | ||| ||||| ||||||||||||| ||| ||| | |||||| ||||||||||||| Sbjct: 118781 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 118722 Query: 303 acgg 306 |||| Sbjct: 118721 acgg 118718
>ref|NM_167908.1| Drosophila melanogaster -coatomer protein CG7961-RB, transcript variant B (alphaCop), mRNA Length = 3992 Score = 71.9 bits (36), Expect = 1e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 183 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 242 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 180 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 239 Query: 243 gggtcgtccagatgtgggactaccgcatgggcacccccctcgaccgcttcgacgagcacg 302 | ||| ||||| ||||||||||||| ||| ||| | |||||| ||||||||||||| Sbjct: 240 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 299 Query: 303 acgg 306 |||| Sbjct: 300 acgg 303
>ref|NM_058047.3| Drosophila melanogaster -coatomer protein CG7961-RA, transcript variant A (alphaCop), mRNA Length = 3979 Score = 71.9 bits (36), Expect = 1e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 183 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 242 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 167 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 226 Query: 243 gggtcgtccagatgtgggactaccgcatgggcacccccctcgaccgcttcgacgagcacg 302 | ||| ||||| ||||||||||||| ||| ||| | |||||| ||||||||||||| Sbjct: 227 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 286 Query: 303 acgg 306 |||| Sbjct: 287 acgg 290
>gb|AY075425.1| Drosophila melanogaster LD46584 full length cDNA Length = 3969 Score = 71.9 bits (36), Expect = 1e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 183 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 242 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 147 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 206 Query: 243 gggtcgtccagatgtgggactaccgcatgggcacccccctcgaccgcttcgacgagcacg 302 | ||| ||||| ||||||||||||| ||| ||| | |||||| ||||||||||||| Sbjct: 207 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 266 Query: 303 acgg 306 |||| Sbjct: 267 acgg 270
>gb|AC067938.1|AC067938 Neurospora crassa chromosome 7, clone G21-F8, complete sequence Length = 37068 Score = 71.9 bits (36), Expect = 1e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 257 tgggactaccgcatgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgc 316 ||||||||||||||||| |||| | ||||| ||||| |||||||| |||||||| ||| Sbjct: 23950 tgggactaccgcatgggtaccctgattgaccgattcgaagagcacgatggccccgtccgc 23891 Query: 317 ggcgtccacttccacaagacacag 340 ||||| | ||||||||||||||| Sbjct: 23890 ggcgttgatttccacaagacacag 23867
>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete sequence Length = 303191 Score = 71.9 bits (36), Expect = 1e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 183 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 242 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 110228 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 110169 Query: 243 gggtcgtccagatgtgggactaccgcatgggcacccccctcgaccgcttcgacgagcacg 302 | ||| ||||| ||||||||||||| ||| ||| | |||||| ||||||||||||| Sbjct: 110168 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 110109 Query: 303 acgg 306 |||| Sbjct: 110108 acgg 110105
>gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, region 62A10-62B5, P1 clones DS02777, DS03222, DS02345, and DS04808, complete sequence Length = 257867 Score = 71.9 bits (36), Expect = 1e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 183 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 242 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 33394 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 33335 Query: 243 gggtcgtccagatgtgggactaccgcatgggcacccccctcgaccgcttcgacgagcacg 302 | ||| ||||| ||||||||||||| ||| ||| | |||||| ||||||||||||| Sbjct: 33334 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 33275 Query: 303 acgg 306 |||| Sbjct: 33274 acgg 33271
>emb|AJ011114.1|DME011114 Drosophila melanogaster mRNA for coatomer alpha subunit Length = 3967 Score = 71.9 bits (36), Expect = 1e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 183 gggtcaagggcctcgccttccacccgcggcgcccatggatcctcgccagcctccacagcg 242 |||| ||||||||| |||||||||| |||||| |||||||| | |||| | ||||||| Sbjct: 151 gggtgaagggcctctccttccaccctaagcgcccctggatcctggtcagcttgcacagcg 210 Query: 243 gggtcgtccagatgtgggactaccgcatgggcacccccctcgaccgcttcgacgagcacg 302 | ||| ||||| ||||||||||||| ||| ||| | |||||| ||||||||||||| Sbjct: 211 gcgtcatccagctgtgggactaccggatgcacacgctcctcgagaagttcgacgagcacg 270 Query: 303 acgg 306 |||| Sbjct: 271 acgg 274
>ref|XM_388115.1| Gibberella zeae PH-1 chromosome 4 conserved hypothetical protein (FG07939.1) partial mRNA Length = 3663 Score = 65.9 bits (33), Expect = 9e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 296 gagcacgacggccccgtacgcggcgtccacttccacaagacacagccgctcttcgtttcc 355 |||||||| || ||||| || |||||| | |||||||||||||| ||||||||||| ||| Sbjct: 163 gagcacgatggtcccgtccgtggcgtcgatttccacaagacacaaccgctcttcgtctcc 222 Query: 356 ggaggtgacgattacaa 372 || ||||| || ||||| Sbjct: 223 ggcggtgatgactacaa 239
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 257 tgggactaccgcatgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgc 316 ||||||||||| |||||||| | | ||||| ||||| |||||||| |||||||| ||| Sbjct: 312976 tgggactaccgtatgggcacactgattgaccgattcgaagagcacgatggccccgtccgc 312917 Query: 317 ggcgtccacttccacaagac 336 || ||| ||||||||||||| Sbjct: 312916 ggtgtcgacttccacaagac 312897
>emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC DP35C12 of chromosome 5 of Podospora anserina Length = 101256 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 257 tgggactaccgcatgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgc 316 ||||||||||| |||||||| | | ||||| ||||| |||||||| |||||||| ||| Sbjct: 9219 tgggactaccgtatgggcacactgattgaccgattcgaagagcacgatggccccgtccgc 9278 Query: 317 ggcgtccacttccacaagac 336 || ||| ||||||||||||| Sbjct: 9279 ggtgtcgacttccacaagac 9298
>ref|NM_127711.2| Arabidopsis thaliana protein transporter/ transporter AT2G21390 mRNA, complete cds Length = 4189 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 152 atgctgaccaagttcgagaccaagagcaaccgggtcaaggg 192 |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 233 atgctgaccaagttcgagaccaagagtaaccgagttaaggg 273
>ref|XM_504161.1| Yarrowia lipolytica CLIB122, YALI0E19767g predicted mRNA Length = 3735 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 257 tgggactaccgcatgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgc 316 ||||||||||| ||||| |||| | ||||| ||||| || ||||| |||||||| || Sbjct: 130 tgggactaccgaatgggaaccctggtggaccggttcgaggaccacgatggccccgttcga 189 Query: 317 ggcgtccacttccacaagacacagccgct 345 || ||| ||||||||||||| |||||||| Sbjct: 190 ggtgtcgacttccacaagacccagccgct 218
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 152 atgctgaccaagttcgagaccaagagcaaccgggtcaaggg 192 |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 49467 atgctgaccaagttcgagaccaagagtaaccgagttaaggg 49507
>dbj|AK110077.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-F05, full insert sequence Length = 4009 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 150 agatgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgc 209 ||||||| || ||||||||| ||||| ||||| ||||||||| ||||||||||||||| Sbjct: 218 agatgctcacaaagttcgagtccaagtcgaaccgcgtcaagggcatcgccttccacccgc 277 Query: 210 g 210 | Sbjct: 278 g 278
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 257 tgggactaccgcatgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgc 316 ||||||||||| ||||| |||| | ||||| ||||| || ||||| |||||||| || Sbjct: 2360254 tgggactaccgaatgggaaccctggtggaccggttcgaggaccacgatggccccgttcga 2360313 Query: 317 ggcgtccacttccacaagacacagccgct 345 || ||| ||||||||||||| |||||||| Sbjct: 2360314 ggtgtcgacttccacaagacccagccgct 2360342
>ref|XM_655538.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3026.2), mRNA Length = 3633 Score = 48.1 bits (24), Expect = 0.020 Identities = 93/116 (80%) Strand = Plus / Plus Query: 257 tgggactaccgcatgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgc 316 ||||| ||||| ||||| || | | ||||||| || || |||||||||||||| || || Sbjct: 106 tgggattaccgtatgggaacactcatcgaccgatttgaggagcacgacggccctgttcgt 165 Query: 317 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaa 372 ||| | |||| ||| || ||||| ||||| ||||||||||||||||| ||||| Sbjct: 166 ggcattgactttcaccctacgcagcccctctttgtttccggaggtgacgactacaa 221
>gb|AF053883.1|AF053883 Emericella nidulans coatomer alpha subunit (sodVIC) mRNA, complete cds Length = 3618 Score = 48.1 bits (24), Expect = 0.020 Identities = 93/116 (80%) Strand = Plus / Plus Query: 257 tgggactaccgcatgggcacccccctcgaccgcttcgacgagcacgacggccccgtacgc 316 ||||| ||||| ||||| || | | ||||||| || || |||||||||||||| || || Sbjct: 106 tgggattaccgtatgggaacactcatcgaccgatttgaggagcacgacggccctgttcgt 165 Query: 317 ggcgtccacttccacaagacacagccgctcttcgtttccggaggtgacgattacaa 372 ||| | |||| ||| || ||||| ||||| ||||||||||||||||| ||||| Sbjct: 166 ggcattgactttcaccctacgcagcccctctttgtttccggaggtgacgactacaa 221
>gb|BC075251.1| Xenopus laevis coatomer protein complex, subunit alpha, mRNA (cDNA clone MGC:84477 IMAGE:7020631), complete cds Length = 3934 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Plus Query: 149 gagatgctgaccaagttcgagaccaag 175 ||||||||||| ||||||||||||||| Sbjct: 47 gagatgctgacgaagttcgagaccaag 73
>gb|AY020473.1| Oryza sativa microsatellite MRG2798 containing (GA)X19, genomic sequence Length = 238 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Minus Query: 150 agatgctgaccaagttcgagaccaaga 176 |||||||||||||||||||||| |||| Sbjct: 27 agatgctgaccaagttcgagacgaaga 1
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH081N08, complete sequence Length = 56991 Score = 46.1 bits (23), Expect = 0.080 Identities = 29/31 (93%) Strand = Plus / Plus Query: 152 atgctgaccaagttcgagaccaagagcaacc 182 |||||||||||||||||||||| ||||||| Sbjct: 51526 atgctgaccaagttcgagaccagtagcaacc 51556
>emb|CR860182.1| Pongo pygmaeus mRNA; cDNA DKFZp469O221 (from clone DKFZp469O221) Length = 3358 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 149 gagatgctgaccaagttcgagaccaagagc 178 |||||||| ||||| ||||||||||||||| Sbjct: 80 gagatgctaaccaaattcgagaccaagagc 109
>dbj|AB179215.1| Macaca fascicularis testis cDNA clone: QtsA-15330, similar to human coatomer protein complex, subunit alpha (COPA), mRNA, RefSeq: NM_004371.2 Length = 2686 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 149 gagatgctgaccaagttcgagaccaagagc 178 |||||||| ||||| ||||||||||||||| Sbjct: 103 gagatgctaaccaaattcgagaccaagagc 132
>gb|AC005500.2| Homo sapiens 22q11 PAC Clone Clone p52f6 In DGCR Region, complete sequence Length = 192592 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 59 cagcccagatccacccaccccacctcacct 88 ||||||||| |||||||||||| ||||||| Sbjct: 83600 cagcccagaaccacccaccccatctcacct 83629
>gb|AC007731.16| Homo sapiens chromosome 22 clone b562f10 map 22q11, complete sequence Length = 182617 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 59 cagcccagatccacccaccccacctcacct 88 ||||||||| |||||||||||| ||||||| Sbjct: 88654 cagcccagaaccacccaccccatctcacct 88683
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 gccgccggagagggagggcggcggcg 144 |||||||||||| ||||||||||||| Sbjct: 16713778 gccgccggagagcgagggcggcggcg 16713753
>emb|AL844160.4| Mouse DNA sequence from clone RP23-340N6 on chromosome 4, complete sequence Length = 207022 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ccacccaccccacctcacctc 89 ||||||||||||||||||||| Sbjct: 63413 ccacccaccccacctcacctc 63433
>ref|NM_001031405.1| Gallus gallus coatomer protein complex, subunit alpha (COPA), mRNA Length = 4338 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 gatgctgaccaagttcgagaccaa 174 ||||||||| |||||||||||||| Sbjct: 61 gatgctgactaagttcgagaccaa 84
>ref|XM_479654.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggagagggagggcggcggcg 144 |||||||||||||||||||| Sbjct: 261 ggagagggagggcggcggcg 242
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gggcctcgccttccacccgc 209 |||||||||||||||||||| Sbjct: 1273529 gggcctcgccttccacccgc 1273548
>gb|AC138192.7| Mus musculus chromosome 10, clone RP23-276D2, complete sequence Length = 209937 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 agatccacccaccccacctc 84 |||||||||||||||||||| Sbjct: 26759 agatccacccaccccacctc 26740
>emb|AL391665.28| Human DNA sequence from clone RP11-519K18 on chromosome 10 Contains the 3' end of the RAI17 gene for retinoic acid induced 17, the 5' end of the PPIF gene for peptidylprolyl isomerase F (cyclophilin F) and two CpG islands, complete sequence Length = 159866 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cccaccccacctcacctctc 91 |||||||||||||||||||| Sbjct: 145125 cccaccccacctcacctctc 145106
>emb|AL139398.20| Human DNA sequence from clone RP11-528B10 on chromosome Xp11.21-11.23, complete sequence Length = 125999 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gatccacccaccccacctcacctc 89 ||||||||||||||||||| |||| Sbjct: 48095 gatccacccaccccacctcccctc 48118
>emb|AJ851796.1| Gallus gallus mRNA for hypothetical protein, clone 34d13 Length = 4338 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 gatgctgaccaagttcgagaccaa 174 ||||||||| |||||||||||||| Sbjct: 61 gatgctgactaagttcgagaccaa 84
>gb|AC164175.5| Mus musculus 10 BAC RP23-251I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180924 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agatccacccaccccacctc 84 |||||||||||||||||||| Sbjct: 63988 agatccacccaccccacctc 64007
>emb|AL929547.13| Mouse DNA sequence from clone RP23-180L23 on chromosome 11 Contains part of a novel gene and a CpG island, complete sequence Length = 218414 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cagcccagatccacccaccc 78 |||||||||||||||||||| Sbjct: 30415 cagcccagatccacccaccc 30434
>gb|AC148696.1| Macaca mulatta Major Histocompatibility Complex BAC MMU246K06, complete sequence Length = 165811 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 caccccacctcacctctctc 93 |||||||||||||||||||| Sbjct: 66153 caccccacctcacctctctc 66172
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggagagggagggcggcggcg 144 |||||||||||||||||||| Sbjct: 12009981 ggagagggagggcggcggcg 12009962
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 taccgcatgggcacccccct 282 |||||||||||||||||||| Sbjct: 2183726 taccgcatgggcacccccct 2183707 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggagagggagggcggcggcg 144 |||||||||||||||||||| Sbjct: 114375 ggagagggagggcggcggcg 114394
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 gccgccggagagggagggcggcgg 142 ||||||||||| |||||||||||| Sbjct: 29473091 gccgccggagacggagggcggcgg 29473114
>gb|AC139667.5| Homo sapiens 3 BAC RP11-88B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135668 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ccacccaccccacctcacct 88 |||||||||||||||||||| Sbjct: 123739 ccacccaccccacctcacct 123720
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 caccccacctcacctctctc 93 |||||||||||||||||||| Sbjct: 1965705 caccccacctcacctctctc 1965686
>gb|AF074705.2|AF074705 Pseudomonas aeruginosa dihydroaeruginoic acid synthetase (pchE), pyochelin synthetase (pchF), reductase (pchG), ABC transporter (pchH), and ABC transporter (pchI) genes, complete cds Length = 15023 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ggatcctcgccagcctccac 238 |||||||||||||||||||| Sbjct: 8014 ggatcctcgccagcctccac 7995
>gb|AE004839.1| Pseudomonas aeruginosa PAO1, section 400 of 529 of the complete genome Length = 17071 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ggatcctcgccagcctccac 238 |||||||||||||||||||| Sbjct: 9736 ggatcctcgccagcctccac 9755
>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_D01 Length = 97862 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 taccgcatgggcacccccct 282 |||||||||||||||||||| Sbjct: 61988 taccgcatgggcacccccct 61969
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 caccccacctcacctctctc 93 |||||||||||||||||||| Sbjct: 1056271 caccccacctcacctctctc 1056252
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 gccgccggagagggagggcggcgg 142 ||||||||||| |||||||||||| Sbjct: 37597 gccgccggagacggagggcggcgg 37620
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggagagggagggcggcggcg 144 |||||||||||||||||||| Sbjct: 29710 ggagagggagggcggcggcg 29729
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggagagggagggcggcggcg 144 |||||||||||||||||||| Sbjct: 114375 ggagagggagggcggcggcg 114394
>dbj|AK064841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G03, full insert sequence Length = 1917 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggagagggagggcggcggcg 144 |||||||||||||||||||| Sbjct: 261 ggagagggagggcggcggcg 242
>emb|AL672229.12| Mouse DNA sequence from clone RP23-335A6 on chromosome 17, complete sequence Length = 187977 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 caccccacctcacctctctc 93 |||||||||||||||||||| Sbjct: 78848 caccccacctcacctctctc 78829 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,199,447 Number of Sequences: 3902068 Number of extensions: 3199447 Number of successful extensions: 75398 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74717 Number of HSP's gapped (non-prelim): 670 length of query: 372 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 350 effective length of database: 17,147,199,772 effective search space: 6001519920200 effective search space used: 6001519920200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)