ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 46 0.035
2ref|XM_590956.2| PREDICTED: Bos taurus similar to Galactosylcera... 42 0.54
3emb|X92557.1|SEPCCBBCP S.erythraea pccB, bcpA2, and orfX genes 42 0.54
4emb|X92556.1|SEHGTABCP S.erythraea hgtA, bcpA1, and orf122 genes 42 0.54
5gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 0.54
6dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 0.54
7gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 0.54
8gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 2.2
9ref|XM_426719.1| PREDICTED: Gallus gallus similar to seven in ab... 40 2.2
10gb|AY630576.1| Glossomastix chrysoplasta clone GcDES6f2 fatty ac... 40 2.2
11gb|AY630575.1| Glossomastix chrysoplasta clone GcDES6f1 fatty ac... 40 2.2
12emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete ... 40 2.2
13gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 2.2
14dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
16dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
17dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
18emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 2.2
19gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 2.2
20gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 2.2
21gb|AY273766.1| Phalaenopsis stuartiana isolate 163 internal tran... 38 8.5
22ref|NM_185475.2| Oryza sativa (japonica cultivar-group), mRNA 38 8.5
23ref|NM_194722.1| Oryza sativa (japonica cultivar-group) putative... 38 8.5
24gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 38 8.5
25gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome... 38 8.5
26gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 38 8.5
27gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 38 8.5
28gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 38 8.5
29emb|AJ786384.1| Streptomyces peucetius afsR-p gene for afsR homo... 38 8.5
30ref|XM_547182.2| PREDICTED: Canis familiaris similar to Synaptog... 38 8.5
31ref|XM_502792.1| Yarrowia lipolytica CLIB122, YALI0D13552g predi... 38 8.5
32gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 38 8.5
33gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 38 8.5
34emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 38 8.5
35emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 38 8.5
36emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 38 8.5
37emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 38 8.5
38emb|AJ271405.1|SRO271405 Streptomyces rochei sttO gene, sttN gen... 38 8.5
39gb|AE005739.1| Caulobacter crescentus CB15 section 65 of 359 of ... 38 8.5
40gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome... 38 8.5
41gb|AC092553.4| Oryza sativa (japonica cultivar-group) chromosome... 38 8.5
42gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 38 8.5
43dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 38 8.5
44gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 38 8.5
45dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.5
46dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.5
47dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.5
48dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic D... 38 8.5
49dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.5
50dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 8.5
51ref|XM_317325.2| Anopheles gambiae str. PEST ENSANGP00000006861 ... 38 8.5
52dbj|AK106449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.5
53emb|AJ532423.1|ECL532423 Euglena clara partial 18S rRNA gene, st... 38 8.5
54gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 38 8.5
55gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 38 8.5
56gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 8.5
57gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 8.5
58gb|AF019869.1| Notochloe microdon internal transcribed spacer 1,... 38 8.5
59emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 38 8.5
60emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 38 8.5 
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 46.1 bits (23), Expect = 0.035
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Minus

                                              
Query: 131     cggcggcgg-tcggccggcgccgtactggcc 160
               ||||||||| |||||||||||||||||||||
Sbjct: 1937703 cggcggcggatcggccggcgccgtactggcc 1937673



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 122     tccaccgcgcggcggcggt 140
               |||||||||||||||||||
Sbjct: 3259713 tccaccgcgcggcggcggt 3259695
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>ref|XM_590956.2| PREDICTED: Bos taurus similar to Galactosylceramide sulfotransferase
            (GalCer sulfotransferase) (Cerebroside sulfotransferase)
            (3-phosphoadenylylsulfate:galactosylceramide
            3-sulfotransferase)
            (3-phosphoadenosine-5phosphosulfate:GalCer
            sulfotransferase) (LOC513295), mRNA
          Length = 1439

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 114  ccgccgcgtccaccgcgcggc 134
            |||||||||||||||||||||
Sbjct: 1228 ccgccgcgtccaccgcgcggc 1208
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>emb|X92557.1|SEPCCBBCP S.erythraea pccB, bcpA2, and orfX genes
          Length = 4473

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 129  cgcggcggcggtcggccggcg 149
            |||||||||||||||||||||
Sbjct: 3622 cgcggcggcggtcggccggcg 3642
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>emb|X92556.1|SEHGTABCP S.erythraea hgtA, bcpA1, and orf122 genes
          Length = 4120

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 129  cgcggcggcggtcggccggcg 149
            |||||||||||||||||||||
Sbjct: 3403 cgcggcggcggtcggccggcg 3423
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 139    gtcggccggcgccgtactggccctggccg 167
              ||||||||||| ||| |||||||||||||
Sbjct: 151781 gtcggccggcggcgttctggccctggccg 151753
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 131     cggcggcggtcggccggcgcc 151
               |||||||||||||||||||||
Sbjct: 6283955 cggcggcggtcggccggcgcc 6283975
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 124     caccgcgcggcggcggtcggccggc 148
               |||||||||||||| ||||||||||
Sbjct: 4096205 caccgcgcggcggccgtcggccggc 4096229



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 112     ccccgccgcgtccaccgcg 130
               |||||||||||||||||||
Sbjct: 1874212 ccccgccgcgtccaccgcg 1874230
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 127   cgcgcggcggcggtcggccggcgc 150
             |||||||||||| |||||||||||
Sbjct: 35747 cgcgcggcggcgctcggccggcgc 35724
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>ref|XM_426719.1| PREDICTED: Gallus gallus similar to seven in absentia homolog 2;
            seven in absentia (Drosophila) homolog 2 (LOC429164),
            mRNA
          Length = 3552

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 118  cgcgtccaccgcgcggcggcggtc 141
            ||||||| ||||||||||||||||
Sbjct: 1671 cgcgtcctccgcgcggcggcggtc 1648
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>gb|AY630576.1| Glossomastix chrysoplasta clone GcDES6f2 fatty acid desaturase (D6)
            mRNA, complete cds
          Length = 1821

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  cgcgtccaccgcgcggcggc 137
            ||||||||||||||||||||
Sbjct: 1604 cgcgtccaccgcgcggcggc 1585
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>gb|AY630575.1| Glossomastix chrysoplasta clone GcDES6f1 fatty acid desaturase (D6)
            mRNA, complete cds
          Length = 1821

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  cgcgtccaccgcgcggcggc 137
            ||||||||||||||||||||
Sbjct: 1604 cgcgtccaccgcgcggcggc 1585
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>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29
          Length = 302007

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 148   cgccgtactggccctggccgtgct 171
             ||||||||||||||| ||||||||
Sbjct: 23216 cgccgtactggccctcgccgtgct 23239
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 117     ccgcgtccaccgcgcggcggcggt 140
               |||| |||||||||||||||||||
Sbjct: 3492508 ccgcctccaccgcgcggcggcggt 3492485



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 147     gcgccgtactggccctggc 165
               |||||||||||||||||||
Sbjct: 1436684 gcgccgtactggccctggc 1436666
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 110      tcccccgccgcgtccaccgcgcggcggc 137
                ||||| ||||||||| ||||||||||||
Sbjct: 28778585 tccccggccgcgtcctccgcgcggcggc 28778612



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 112     ccccgccgcgtccaccgcg 130
               |||||||||||||||||||
Sbjct: 1465354 ccccgccgcgtccaccgcg 1465372
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 127      cgcgcggcggcggtcggccggcgc 150
                ||||||||||||| ||||||||||
Sbjct: 25885940 cgcgcggcggcggccggccggcgc 25885917
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 110   tcccccgccgcgtccaccgcgcggcggc 137
             ||||| ||||||||| ||||||||||||
Sbjct: 86360 tccccggccgcgtcctccgcgcggcggc 86387
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>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1282_H11
          Length = 143314

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 127   cgcgcggcggcggtcggccggcgc 150
             ||||||||||||| ||||||||||
Sbjct: 37281 cgcgcggcggcggccggccggcgc 37258
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    gtccaccgcgcggcggcggt 140
              ||||||||||||||||||||
Sbjct: 442584 gtccaccgcgcggcggcggt 442603
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 129     cgcggcggcggtcggccggc 148
               ||||||||||||||||||||
Sbjct: 3596264 cgcggcggcggtcggccggc 3596245



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 115    cgccgcgtccaccgcgcgg 133
              |||||||||||||||||||
Sbjct: 364702 cgccgcgtccaccgcgcgg 364720
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 119     gcgtccaccgcgcggcggcg 138
               ||||||||||||||||||||
Sbjct: 1020105 gcgtccaccgcgcggcggcg 1020086
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>gb|AY273766.1| Phalaenopsis stuartiana isolate 163 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 755

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 130 gcggcggcggtcggccggcgccg 152
           ||||||||||||||||| |||||
Sbjct: 92  gcggcggcggtcggccgccgccg 114
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>ref|NM_185475.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3084

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 112  ccccgccgcgtccaccgcg 130
            |||||||||||||||||||
Sbjct: 2231 ccccgccgcgtccaccgcg 2213
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>ref|NM_194722.1| Oryza sativa (japonica cultivar-group) putative NBS-LRR type
            resistance protein (OSJNBb0072F04.19), mRNA
          Length = 2883

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 135  ggcggtcggccggcgccgt 153
            |||||||||||||||||||
Sbjct: 2679 ggcggtcggccggcgccgt 2661
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 109     gtcccccgccgcgtccaccgcgcggcg 135
               |||||| ||||| ||||||||||||||
Sbjct: 2058615 gtccccggccgcctccaccgcgcggcg 2058641
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>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22
              map R10571S, complete sequence
          Length = 154441

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 128    gcgcggcggcggtcggccggcgc 150
              |||||||||||| ||||||||||
Sbjct: 119137 gcgcggcggcggccggccggcgc 119159
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    cgcgcggcggcggtcggcc 145
              |||||||||||||||||||
Sbjct: 226627 cgcgcggcggcggtcggcc 226645
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    cgcgcggcggcggtcggcc 145
              |||||||||||||||||||
Sbjct: 908904 cgcgcggcggcggtcggcc 908922



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 115    cgccgcgtccaccgcgcgg 133
              |||||||||||||||||||
Sbjct: 575067 cgccgcgtccaccgcgcgg 575085
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 130     gcggcggcggtcggccggcgccg 152
               |||||||||||||||||| ||||
Sbjct: 1764911 gcggcggcggtcggccggggccg 1764933
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>emb|AJ786384.1| Streptomyces peucetius afsR-p gene for afsR homologue
          Length = 2949

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 141  cggccggcgccgtactggccctg 163
            |||||||||||||||||| ||||
Sbjct: 1673 cggccggcgccgtactggacctg 1695
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>ref|XM_547182.2| PREDICTED: Canis familiaris similar to Synaptogyrin-3 (LOC490062),
           mRNA
          Length = 597

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 124 caccgcgcggcggcggtcg 142
           |||||||||||||||||||
Sbjct: 222 caccgcgcggcggcggtcg 204
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>ref|XM_502792.1| Yarrowia lipolytica CLIB122, YALI0D13552g predicted mRNA
          Length = 1542

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 148 cgccgtactggccctggcc 166
           |||||||||||||||||||
Sbjct: 339 cgccgtactggccctggcc 357
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 116     gccgcgtccaccgcgcggc 134
               |||||||||||||||||||
Sbjct: 3616531 gccgcgtccaccgcgcggc 3616549
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 135     ggcggtcggccggcgccgt 153
               |||||||||||||||||||
Sbjct: 1867703 ggcggtcggccggcgccgt 1867721
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 144    ccggcgccgtactggccct 162
              |||||||||||||||||||
Sbjct: 224263 ccggcgccgtactggccct 224245
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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 144   ccggcgccgtactggccct 162
             |||||||||||||||||||
Sbjct: 78660 ccggcgccgtactggccct 78678
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    cgcgcggcggcggtcggcc 145
              |||||||||||||||||||
Sbjct: 751287 cgcgcggcggcggtcggcc 751305



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 115    cgccgcgtccaccgcgcgg 133
              |||||||||||||||||||
Sbjct: 383657 cgccgcgtccaccgcgcgg 383675
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 130    gcggcggcggtcggccggc 148
              |||||||||||||||||||
Sbjct: 310487 gcggcggcggtcggccggc 310469
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>emb|AJ271405.1|SRO271405 Streptomyces rochei sttO gene, sttN gene, sttM gene, sttL gene, sttK
             gene, sttJ gene, sttI gene, sttH gene, sttG gene, sttF
             gene and sttE gene, strain F20
          Length = 13339

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 113   cccgccgcgtccaccgcgc 131
             |||||||||||||||||||
Sbjct: 11764 cccgccgcgtccaccgcgc 11782
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>gb|AE005739.1| Caulobacter crescentus CB15 section 65 of 359 of the complete genome
          Length = 10317

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 118   cgcgtccaccgcgcggcgg 136
             |||||||||||||||||||
Sbjct: 10034 cgcgtccaccgcgcggcgg 10016
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>gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0072F04, complete sequence
          Length = 137724

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   ggcggtcggccggcgccgt 153
             |||||||||||||||||||
Sbjct: 86156 ggcggtcggccggcgccgt 86174
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>gb|AC092553.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0072F04,
              complete sequence
          Length = 133121

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 135    ggcggtcggccggcgccgt 153
              |||||||||||||||||||
Sbjct: 119277 ggcggtcggccggcgccgt 119295
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 149     gccgtactggccctggccgtgct 171
               |||| ||||||||||||||||||
Sbjct: 2360924 gccgcactggccctggccgtgct 2360946
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 144    ccggcgccgtactggccct 162
              |||||||||||||||||||
Sbjct: 394644 ccggcgccgtactggccct 394662
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 119     gcgtccaccgcgcggcggc 137
               |||||||||||||||||||
Sbjct: 3167673 gcgtccaccgcgcggcggc 3167691
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 112      ccccgccgcgtccaccgcg 130
                |||||||||||||||||||
Sbjct: 22287311 ccccgccgcgtccaccgcg 22287329
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 128     gcgcggcggcggtcggccggcgc 150
               |||||||||||| ||||||||||
Sbjct: 3195848 gcgcggcggcggccggccggcgc 3195826
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 135     ggcggtcggccggcgccgt 153
               |||||||||||||||||||
Sbjct: 1867703 ggcggtcggccggcgccgt 1867721
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>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0038F22
          Length = 101666

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 112   ccccgccgcgtccaccgcg 130
             |||||||||||||||||||
Sbjct: 72640 ccccgccgcgtccaccgcg 72658
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>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0425F02
          Length = 176979

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 112    ccccgccgcgtccaccgcg 130
              |||||||||||||||||||
Sbjct: 173893 ccccgccgcgtccaccgcg 173911
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 114     ccgccgcgtccaccgcgcg 132
               |||||||||||||||||||
Sbjct: 3663937 ccgccgcgtccaccgcgcg 3663919



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 117     ccgcgtccaccgcgcggcg 135
               |||||||||||||||||||
Sbjct: 3411520 ccgcgtccaccgcgcggcg 3411538



 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 128     gcgcggcggcggtcggccggcgc 150
               |||||||||||||||||| ||||
Sbjct: 2706106 gcgcggcggcggtcggcctgcgc 2706128
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>ref|XM_317325.2| Anopheles gambiae str. PEST ENSANGP00000006861
           (ENSANGG00000005165), partial mRNA
          Length = 1230

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 124 caccgcgcggcggcggtcg 142
           |||||||||||||||||||
Sbjct: 872 caccgcgcggcggcggtcg 890
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>dbj|AK106449.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E10, full
            insert sequence
          Length = 3083

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 112  ccccgccgcgtccaccgcg 130
            |||||||||||||||||||
Sbjct: 2231 ccccgccgcgtccaccgcg 2213
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>emb|AJ532423.1|ECL532423 Euglena clara partial 18S rRNA gene, strain SAG 25.98
          Length = 3314

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 127  cgcgcggcggcggtcggccggcg 149
            ||||||||||||| |||||||||
Sbjct: 1342 cgcgcggcggcggccggccggcg 1320
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 133     gcggcggtcggccggcgcc 151
               |||||||||||||||||||
Sbjct: 3999601 gcggcggtcggccggcgcc 3999619
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 123    ccaccgcgcggcggcggtc 141
              |||||||||||||||||||
Sbjct: 720671 ccaccgcgcggcggcggtc 720653
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 135     ggcggtcggccggcgccgt 153
               |||||||||||||||||||
Sbjct: 1867654 ggcggtcggccggcgccgt 1867672
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 128     gcgcggcggcggtcggccggcgc 150
               |||||||||||| ||||||||||
Sbjct: 3204553 gcgcggcggcggccggccggcgc 3204531
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>gb|AF019869.1| Notochloe microdon internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence
          Length = 607

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 127 cgcgcggcggcggtcggcc 145
           |||||||||||||||||||
Sbjct: 172 cgcgcggcggcggtcggcc 190
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 112   ccccgccgcgtccaccgcg 130
             |||||||||||||||||||
Sbjct: 38213 ccccgccgcgtccaccgcg 38231
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 148     cgccgtactggccctggcc 166
               |||||||||||||||||||
Sbjct: 1675595 cgccgtactggccctggcc 1675613


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 701,548
Number of Sequences: 3902068
Number of extensions: 701548
Number of successful extensions: 57987
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52626
Number of HSP's gapped (non-prelim): 5361
length of query: 174
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 152
effective length of database: 17,147,199,772
effective search space: 2606374365344
effective search space used: 2606374365344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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