Clone Name | bastl43b07 |
---|---|
Clone Library Name | barley_pub |
>MFN2B_XENLA (Q68F18) Mitoferrin-2B (Mitochondrial iron transporter 2-B) (Solute| carrier family 25 member 28-B) Length = 186 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +2 Query: 197 RRGWLSRGNGSVQFDSTATATLAGELASSGRL 292 RRGW + G G ++ D + TLA E SS R+ Sbjct: 26 RRGWATAGPGVLESDGGSGGTLAFESTSSSRI 57
>LWA_ANTEL (Q16992) LWamide neuropeptides precursor [Contains: LWamide I;| Metamorphosin A (LWamide II) (MMA); LWamide III; LWamide IV; LWamide V; LWamide VI; LWamide VII; LWamide VIII; LWamide IX] Length = 514 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -2 Query: 107 PGYWRLAPSPWRRAPTPPSPSEFWGEQKGLG 15 PG W +P W R+ P P WG+++ G Sbjct: 350 PGLWGKSPGLWGRSADPQQPG-LWGKRQNPG 379
>SPA3K_MOUSE (P07759) Serine protease inhibitor A3K precursor (Contrapsin)| (Serpin A3K) Length = 418 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 12/38 (31%) Frame = -1 Query: 108 AGILETRTVAV------------ETGTDAAVAIGILGG 31 +GI ET+ ++V ETGT+AA A G++GG Sbjct: 344 SGITETKKLSVSQVVHKAVLDVAETGTEAAAATGVIGG 381
>GCNL2_MOUSE (Q9JHD2) General control of amino acid synthesis protein 5-like 2| (EC 2.3.1.48) (Histone acetyltransferase GCN5) (mmGCN5) Length = 830 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +1 Query: 16 PKPFCSPQNSDGDGGVGARLHGDGASLQYPGLRRR*RA 129 P P +P S G GG G GD A PGL ++ RA Sbjct: 48 PAPAAAPAGSTGSGGAGVGSGGDPAR---PGLSQQQRA 82
>ATF5_RAT (Q6P788) Cyclic AMP-dependent transcription factor ATF-5| (Activating transcription factor 5) (Transcription factor ATFx) Length = 281 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +1 Query: 1 PAVTRPKPFCSPQNSDGDGGVGARLHGDGASLQYPGLRRR*RA 129 P+++RP P+ SP ++ GD R A+L+Y R+R RA Sbjct: 191 PSLSRPAPYPSPASTRGDRKQKKRDQNKSAALRY---RQRKRA 230
>MYLK_HUMAN (Q15746) Myosin light chain kinase, smooth muscle and non-muscle| isozymes (EC 2.7.11.18) (MLCK) [Contains: Telokin (Kinase-related protein) (KRP)] Length = 1914 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = -2 Query: 107 PGYWRLAPS-PWRRAPTPPSPSEFWGEQKGLG 15 PG L+PS R+ P PP P+ F Q GLG Sbjct: 359 PGLGVLSPSGEERKRPAPPRPATFPTRQPGLG 390 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,338,908 Number of Sequences: 219361 Number of extensions: 379813 Number of successful extensions: 1711 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1615 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1711 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)