ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MFN2B_XENLA (Q68F18) Mitoferrin-2B (Mitochondrial iron transport... 30 1.4
2LWA_ANTEL (Q16992) LWamide neuropeptides precursor [Contains: LW... 28 5.3
3SPA3K_MOUSE (P07759) Serine protease inhibitor A3K precursor (Co... 28 5.3
4GCNL2_MOUSE (Q9JHD2) General control of amino acid synthesis pro... 28 5.3
5ATF5_RAT (Q6P788) Cyclic AMP-dependent transcription factor ATF-... 28 6.9
6MYLK_HUMAN (Q15746) Myosin light chain kinase, smooth muscle and... 28 6.9

>MFN2B_XENLA (Q68F18) Mitoferrin-2B (Mitochondrial iron transporter 2-B) (Solute|
           carrier family 25 member 28-B)
          Length = 186

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 197 RRGWLSRGNGSVQFDSTATATLAGELASSGRL 292
           RRGW + G G ++ D  +  TLA E  SS R+
Sbjct: 26  RRGWATAGPGVLESDGGSGGTLAFESTSSSRI 57



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>LWA_ANTEL (Q16992) LWamide neuropeptides precursor [Contains: LWamide I;|
           Metamorphosin A (LWamide II) (MMA); LWamide III; LWamide
           IV; LWamide V; LWamide VI; LWamide VII; LWamide VIII;
           LWamide IX]
          Length = 514

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 107 PGYWRLAPSPWRRAPTPPSPSEFWGEQKGLG 15
           PG W  +P  W R+  P  P   WG+++  G
Sbjct: 350 PGLWGKSPGLWGRSADPQQPG-LWGKRQNPG 379



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>SPA3K_MOUSE (P07759) Serine protease inhibitor A3K precursor (Contrapsin)|
           (Serpin A3K)
          Length = 418

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 12/38 (31%)
 Frame = -1

Query: 108 AGILETRTVAV------------ETGTDAAVAIGILGG 31
           +GI ET+ ++V            ETGT+AA A G++GG
Sbjct: 344 SGITETKKLSVSQVVHKAVLDVAETGTEAAAATGVIGG 381



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>GCNL2_MOUSE (Q9JHD2) General control of amino acid synthesis protein 5-like 2|
           (EC 2.3.1.48) (Histone acetyltransferase GCN5) (mmGCN5)
          Length = 830

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 16  PKPFCSPQNSDGDGGVGARLHGDGASLQYPGLRRR*RA 129
           P P  +P  S G GG G    GD A    PGL ++ RA
Sbjct: 48  PAPAAAPAGSTGSGGAGVGSGGDPAR---PGLSQQQRA 82



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>ATF5_RAT (Q6P788) Cyclic AMP-dependent transcription factor ATF-5|
           (Activating transcription factor 5) (Transcription
           factor ATFx)
          Length = 281

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 1   PAVTRPKPFCSPQNSDGDGGVGARLHGDGASLQYPGLRRR*RA 129
           P+++RP P+ SP ++ GD     R     A+L+Y   R+R RA
Sbjct: 191 PSLSRPAPYPSPASTRGDRKQKKRDQNKSAALRY---RQRKRA 230



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>MYLK_HUMAN (Q15746) Myosin light chain kinase, smooth muscle and non-muscle|
           isozymes (EC 2.7.11.18) (MLCK) [Contains: Telokin
           (Kinase-related protein) (KRP)]
          Length = 1914

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -2

Query: 107 PGYWRLAPS-PWRRAPTPPSPSEFWGEQKGLG 15
           PG   L+PS   R+ P PP P+ F   Q GLG
Sbjct: 359 PGLGVLSPSGEERKRPAPPRPATFPTRQPGLG 390


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,338,908
Number of Sequences: 219361
Number of extensions: 379813
Number of successful extensions: 1711
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1711
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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