Clone Name | bastl43b05 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_189191.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3582 Score = 238 bits (120), Expect = 1e-59 Identities = 210/240 (87%) Strand = Plus / Plus Query: 108 tgcctccgacgagatcgacggatgcggcggcttcgtcgaagcgagctcgggcctggccaa 167 |||||||||||||||| |||| ||||||||||||||||| ||||||||||| || ||||| Sbjct: 60 tgcctccgacgagatccacggctgcggcggcttcgtcgaggcgagctcggggctagccaa 119 Query: 168 atcgaggagggcgtcagagtccaagttcgactactctgacataacggttgagctgtgtac 227 ||||||| |||||| || |||||| |||||||||| ||||| ||||||||||||||||| Sbjct: 120 gtcgaggaaggcgtcggactccaagctcgactactccgacatcacggttgagctgtgtac 179 Query: 228 tgtcgacggtttggtgaaagaaagcacccaatgcgctcctaatggctactatttcattcc 287 | | || |||||||| || |||||||| || || || |||||||| |||||||| || || Sbjct: 180 tattgatggtttggttaaggaaagcactcagtgtgcccctaatggatactattttatccc 239 Query: 288 agtctatgacaagggttcatttgtcgtcagagttaaggggcctaagggatggtcatggaa 347 ||||||||||||||||||||| | ||||||||||||||||| ||||| ||||| ||||| Sbjct: 240 agtctatgacaagggttcattcatggtcagagttaaggggcccaaggggtggtcttggaa 299
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 1e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 213 ggttgagctgtgtactgtcgacggtttggtgaaagaaagcacccaatgcgctcctaatgg 272 |||||||||||||||| | || |||||||| || |||||||| || || || |||||||| Sbjct: 11035634 ggttgagctgtgtactattgatggtttggttaaggaaagcactcagtgtgcccctaatgg 11035575 Query: 273 ctactatttcattccagtctatgacaagg 301 |||||||| || |||||||||||||||| Sbjct: 11035574 atactattttatcccagtctatgacaagg 11035546 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 148 gcgagctcgggcctggccaaatcgaggagggcgtcagagtccaagttcgactactctgac 207 ||||||||||| || ||||| ||||||| |||||| || |||||| |||||||||| ||| Sbjct: 11036703 gcgagctcggggctagccaagtcgaggaaggcgtcggactccaagctcgactactccgac 11036644 Query: 208 ataacggt 215 || ||||| Sbjct: 11036643 atcacggt 11036636 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 108 tgcctccgacgagatcgacggatgcggcggcttcgtcga 146 |||||||||||||||| |||| ||||||||||||||||| Sbjct: 11036849 tgcctccgacgagatccacggctgcggcggcttcgtcga 11036811 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 299 agggttcatttgtcgtcagagttaaggggcctaagggatggtcatggaa 347 |||||||||| | ||||||||||||||||| ||||| ||||| ||||| Sbjct: 11035373 agggttcattcatggtcagagttaaggggcccaaggggtggtcttggaa 11035325 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 26075901 tcctcctcctcctttccctc 26075882 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 3580434 tcctcctcctcctttccctc 3580415
>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0682B08 Length = 138376 Score = 81.8 bits (41), Expect = 1e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 213 ggttgagctgtgtactgtcgacggtttggtgaaagaaagcacccaatgcgctcctaatgg 272 |||||||||||||||| | || |||||||| || |||||||| || || || |||||||| Sbjct: 64516 ggttgagctgtgtactattgatggtttggttaaggaaagcactcagtgtgcccctaatgg 64457 Query: 273 ctactatttcattccagtctatgacaagg 301 |||||||| || |||||||||||||||| Sbjct: 64456 atactattttatcccagtctatgacaagg 64428 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 148 gcgagctcgggcctggccaaatcgaggagggcgtcagagtccaagttcgactactctgac 207 ||||||||||| || ||||| ||||||| |||||| || |||||| |||||||||| ||| Sbjct: 65585 gcgagctcggggctagccaagtcgaggaaggcgtcggactccaagctcgactactccgac 65526 Query: 208 ataacggt 215 || ||||| Sbjct: 65525 atcacggt 65518 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 108 tgcctccgacgagatcgacggatgcggcggcttcgtcga 146 |||||||||||||||| |||| ||||||||||||||||| Sbjct: 65731 tgcctccgacgagatccacggctgcggcggcttcgtcga 65693 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 299 agggttcatttgtcgtcagagttaaggggcctaagggatggtcatggaa 347 |||||||||| | ||||||||||||||||| ||||| ||||| ||||| Sbjct: 64255 agggttcattcatggtcagagttaaggggcccaaggggtggtcttggaa 64207
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487H02 Length = 145491 Score = 81.8 bits (41), Expect = 1e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 213 ggttgagctgtgtactgtcgacggtttggtgaaagaaagcacccaatgcgctcctaatgg 272 |||||||||||||||| | || |||||||| || |||||||| || || || |||||||| Sbjct: 138476 ggttgagctgtgtactattgatggtttggttaaggaaagcactcagtgtgcccctaatgg 138417 Query: 273 ctactatttcattccagtctatgacaagg 301 |||||||| || |||||||||||||||| Sbjct: 138416 atactattttatcccagtctatgacaagg 138388 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 148 gcgagctcgggcctggccaaatcgaggagggcgtcagagtccaagttcgactactctgac 207 ||||||||||| || ||||| ||||||| |||||| || |||||| |||||||||| ||| Sbjct: 139545 gcgagctcggggctagccaagtcgaggaaggcgtcggactccaagctcgactactccgac 139486 Query: 208 ataacggt 215 || ||||| Sbjct: 139485 atcacggt 139478 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 108 tgcctccgacgagatcgacggatgcggcggcttcgtcga 146 |||||||||||||||| |||| ||||||||||||||||| Sbjct: 139691 tgcctccgacgagatccacggctgcggcggcttcgtcga 139653 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 299 agggttcatttgtcgtcagagttaaggggcctaagggatggtcatggaa 347 |||||||||| | ||||||||||||||||| ||||| ||||| ||||| Sbjct: 138215 agggttcattcatggtcagagttaaggggcccaaggggtggtcttggaa 138167
>ref|NM_116101.2| Arabidopsis thaliana unknown protein AT3G62360 mRNA, complete cds Length = 4006 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 268 aatggctactatttcattccagtctatgacaagggttcatt 308 ||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 320 aatggttactatttcatcccagtatatgacaagggctcatt 360
>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence Length = 204108 Score = 48.1 bits (24), Expect = 0.019 Identities = 27/28 (96%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccct 92 |||||||| ||||||||||||||||||| Sbjct: 56904 tcctccccctcctcctcctcctttccct 56931
>gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome 14, complete sequence Length = 167114 Score = 48.1 bits (24), Expect = 0.019 Identities = 27/28 (96%) Strand = Plus / Minus Query: 60 ccccgtcctccccgtcctcctcctcctt 87 |||| ||||||||||||||||||||||| Sbjct: 9881 ccccctcctccccgtcctcctcctcctt 9854
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctcgcc 96 ||||| |||||||||||||||||||| ||||| Sbjct: 8859595 tcctcgccgtcctcctcctcctttccatcgcc 8859564 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcctcctcctttccctcgc 95 |||||||||||||||||||||| Sbjct: 28284031 tcctcctcctcctttccctcgc 28284052
>gb|AY604180.1| Oryza sativa (japonica cultivar-group) gibberellin-stimulated protein (Gsr1) gene, complete cds Length = 881 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctcgcc 96 ||||| |||||||||||||||||||| ||||| Sbjct: 141 tcctcgccgtcctcctcctcctttccatcgcc 172
>gb|AC167668.1| Mus musculus BAC clone RP24-241I19 from chromosome 14, complete sequence Length = 173679 Score = 48.1 bits (24), Expect = 0.019 Identities = 27/28 (96%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcctcctt 87 |||| ||||||||||||||||||||||| Sbjct: 48488 ccccctcctccccgtcctcctcctcctt 48515
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctcgcc 96 ||||| |||||||||||||||||||| ||||| Sbjct: 129916 tcctcgccgtcctcctcctcctttccatcgcc 129885
>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528B02 Length = 144495 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctcgcc 96 ||||| |||||||||||||||||||| ||||| Sbjct: 25224 tcctcgccgtcctcctcctcctttccatcgcc 25193
>gb|AC118216.15| Mus musculus chromosome 1, clone RP23-209N14, complete sequence Length = 269784 Score = 46.1 bits (23), Expect = 0.075 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcctttccct 92 ||||||| ||||||||||||||||||| Sbjct: 206557 cctccccctcctcctcctcctttccct 206531
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Minus Query: 64 gtcctccccgtcctcctcctcct 86 ||||||||||||||||||||||| Sbjct: 97487 gtcctccccgtcctcctcctcct 97465
>emb|AL355493.14| Human DNA sequence from clone RP11-748L13 on chromosome 10 Contains the 3' end of a novel pseudogene (FLJ10376), a pseudogene similar to part of breast cancer antigen NY-BR-1 (NY-BR-1), three novel pseudogenes and two CpG islands, complete sequence Length = 133954 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 284 ttccagtctatgacaagggttca 306 ||||||||||||||||||||||| Sbjct: 100765 ttccagtctatgacaagggttca 100787
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Minus Query: 64 gtcctccccgtcctcctcctcct 86 ||||||||||||||||||||||| Sbjct: 16456888 gtcctccccgtcctcctcctcct 16456866
>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete sequence Length = 189900 Score = 46.1 bits (23), Expect = 0.075 Identities = 26/27 (96%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcctcct 86 ||||||||||||| ||||||||||||| Sbjct: 102045 ccccgtcctccccctcctcctcctcct 102071
>dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N01, full insert sequence Length = 3214 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Minus Query: 64 gtcctccccgtcctcctcctcct 86 ||||||||||||||||||||||| Sbjct: 311 gtcctccccgtcctcctcctcct 289
>gb|AC005875.2|AC005875 citb_188_b_12, complete sequence Length = 131535 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Plus Query: 284 ttccagtctatgacaagggttca 306 ||||||||||||||||||||||| Sbjct: 70280 ttccagtctatgacaagggttca 70302
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Minus Query: 64 gtcctccccgtcctcctcctcct 86 ||||||||||||||||||||||| Sbjct: 16547892 gtcctccccgtcctcctcctcct 16547870
>gb|AC138720.5| Mus musculus BAC clone RP23-192O12 from chromosome 3, complete sequence Length = 191825 Score = 46.1 bits (23), Expect = 0.075 Identities = 26/27 (96%) Strand = Plus / Minus Query: 60 ccccgtcctccccgtcctcctcctcct 86 |||||||||||||||||||||| |||| Sbjct: 115264 ccccgtcctccccgtcctcctcgtcct 115238
>ref|NM_196493.1| Oryza sativa (japonica cultivar-group) contains similarity to histone acetyltransferase GCN5 (OSJNBa0032I20.6), mRNA Length = 1752 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 cccgtcctccccgtcctcctcc 82 |||||||||||||||||||||| Sbjct: 174 cccgtcctccccgtcctcctcc 195
>gb|AC007808.5| Drosophila melanogaster clone BACR18C01, complete sequence Length = 167195 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 150346 tcctccccgtcctcctcctcct 150367
>gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, complete sequence Length = 193192 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttcc 90 |||||||| ||||||||||||||||| Sbjct: 179030 tcctccccctcctcctcctcctttcc 179055
>ref|XM_654456.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1944.2), mRNA Length = 2073 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 59 accccgtcctccccgtcctcctcctccttt 88 |||||||||||||||||| || |||||||| Sbjct: 2001 accccgtcctccccgtccaccacctccttt 1972
>gb|AC137749.11| Mus musculus chromosome 6, clone RP23-69C16, complete sequence Length = 293695 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttcc 90 |||||||| ||||||||||||||||| Sbjct: 138872 tcctccccttcctcctcctcctttcc 138897
>gb|AC125375.3| Mus musculus BAC clone RP23-464K21 from chromosome 14, complete sequence Length = 198193 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 41093 tcctccccgtcctcctcctcct 41114
>gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome 19, complete sequence Length = 159681 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 19931 tcctccccgtcctcctcctcct 19952
>gb|AC134830.2| Mus musculus BAC clone RP24-498G16 from chromosome 19, complete sequence Length = 155666 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 37928 tcctccccgtcctcctcctcct 37907
>gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome 8, complete sequence Length = 180143 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 94917 tcctccccgtcctcctcctcct 94896
>gb|AC122273.4| Mus musculus BAC clone RP23-228B2 from 9, complete sequence Length = 196627 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 tccccgtcctcctcctcctttccctc 93 ||||| |||||||||||||||||||| Sbjct: 130853 tccccctcctcctcctcctttccctc 130878
>gb|AC036121.11| Mus musculus chromosome 6, clone RP23-158O9, complete sequence Length = 215685 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttcc 90 |||||||| ||||||||||||||||| Sbjct: 30375 tcctccccttcctcctcctcctttcc 30400
>gb|BC001671.2| Homo sapiens CGI-130 protein, mRNA (cDNA clone IMAGE:2820689), complete cds Length = 929 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 96 tcctccccgtcctcctcctcct 75
>emb|AL121938.10|HSDJ167O5 Human DNA sequence from clone RP1-167O5 on chromosome 6q22.1-23.3 Contains the 3' end of the TPD52L1 gene encoding two variants of tumor protein D52-like 1 protein, the gene for CGI-130 protein and a CpG island, complete sequence Length = 156054 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 123674 tcctccccgtcctcctcctcct 123695
>gb|AC139749.4| Homo sapiens chromosome 11, clone RP13-870H17, complete sequence Length = 131676 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 tccccgtcctcctcctcctttccctc 93 ||||| |||||||||||||||||||| Sbjct: 72051 tccccttcctcctcctcctttccctc 72026
>gb|AC011488.7| Homo sapiens chromosome 19 clone CTB-171N13, complete sequence Length = 134308 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 58142 tcctccccgtcctcctcctcct 58163
>gb|AC175202.2| Sporobolomyces roseus clone JGIBAIF-37E14, complete sequence Length = 41826 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 38840 tcctccccgtcctcctcctcct 38861
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 cccgtcctccccgtcctcctcc 82 |||||||||||||||||||||| Sbjct: 14041087 cccgtcctccccgtcctcctcc 14041066 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 10511339 cctccccgtcctcctcctcct 10511319
>gb|AC008136.4|AC008136 Drosophila melanogaster, chromosome 3R, region 88D-88E, BAC clone BACR08H11, complete sequence Length = 154890 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 9501 tcctccccgtcctcctcctcct 9522
>gb|AC154289.1| Mus musculus BAC clone RP23-449E11 from chromosome 16, complete sequence Length = 191617 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 tccccgtcctcctcctcctttccctc 93 ||||| |||||||||||||||||||| Sbjct: 140615 tccccttcctcctcctcctttccctc 140590
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcctcctcctttccctcgc 95 |||||||||||||||||||||| Sbjct: 82060 tcctcctcctcctttccctcgc 82081
>emb|BX571948.8| Zebrafish DNA sequence from clone DKEY-185P13 in linkage group 22, complete sequence Length = 184751 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctc 84 |||||||||||||||||||||| Sbjct: 30833 cgtcctccccgtcctcctcctc 30812
>gb|AC102224.21| Mus musculus chromosome 3, clone RP24-372D1, complete sequence Length = 196936 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcctcctttccctc 93 |||| |||||||| |||||||||||||| ||||| Sbjct: 94589 ccccctcctccccctcctcctcctccttcccctc 94622
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 cccgtcctccccgtcctcctcc 82 |||||||||||||||||||||| Sbjct: 57216 cccgtcctccccgtcctcctcc 57195
>dbj|AK111779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078H10, full insert sequence Length = 1691 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 cccgtcctccccgtcctcctcc 82 |||||||||||||||||||||| Sbjct: 289 cccgtcctccccgtcctcctcc 310
>emb|AL162507.1|ATT12C14 Arabidopsis thaliana DNA chromosome 3, BAC clone T12C14 Length = 77720 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Minus Query: 268 aatggctactatttcattccagtctatgacaagg 301 ||||| ||||||||||| ||||| |||||||||| Sbjct: 23141 aatggttactatttcatcccagtatatgacaagg 23108
>gb|AF056116.1|AF056116 Fugu rubripes serine/threonine kinase receptor type1, All-1 related protein (ALR), fugu hedgehog (fhh), Ikaros-like, wnt1, wnt10b, ARF3, erbB3, PAS1, and L41 ribosomal protein genes, complete cds; LRP1 gene, partial cds; and unknown genes Length = 148640 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 ccccgtcctccccgtcctcctc 81 |||||||||||||||||||||| Sbjct: 6542 ccccgtcctccccgtcctcctc 6521
>gb|AE003706.5| Drosophila melanogaster chromosome 3R, section 44 of 118 of the complete sequence Length = 270961 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 123647 tcctccccgtcctcctcctcct 123668
>gb|AC115976.13| Mus musculus chromosome 1, clone RP24-82A12, complete sequence Length = 222238 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttcc 90 |||||||| ||||||||||||||||| Sbjct: 132398 tcctccccctcctcctcctcctttcc 132373 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcctttccctc 93 ||||||| |||||||||||||| ||||| Sbjct: 87793 cctccccctcctcctcctccttcccctc 87820
>gb|U67167.1|HSU67167 Homo sapiens intestinal mucin (MUC2) gene, promoter region and partial cds Length = 11263 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 tccccgtcctcctcctcctttccctc 93 ||||| |||||||||||||||||||| Sbjct: 5408 tccccttcctcctcctcctttccctc 5433
>gb|U68061.1|HSU68061 Human MUC2 gene, promoter region Length = 12237 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 tccccgtcctcctcctcctttccctc 93 ||||| |||||||||||||||||||| Sbjct: 8574 tccccttcctcctcctcctttccctc 8599
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 cccgtcctccccgtcctcctcc 82 |||||||||||||||||||||| Sbjct: 14049329 cccgtcctccccgtcctcctcc 14049308 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 10517378 cctccccgtcctcctcctcct 10517358
>emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on chromosome 2, complete sequence Length = 190466 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 154349 tcctccccgtcctcctcctcct 154370 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcctcctt 87 ||||||||||| | |||||||||||||| Sbjct: 154353 ccccgtcctcctcctcctcctcctcctt 154380
>gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome 1, complete sequence Length = 209249 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttcc 90 |||||||| ||||||||||||||||| Sbjct: 151156 tcctccccctcctcctcctcctttcc 151131
>gb|AC101992.11| Mus musculus chromosome 3, clone RP24-377J3, complete sequence Length = 191967 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 105091 tcctccccgtcctcctcctcct 105070
>emb|AL672100.7| Mouse DNA sequence from clone RP23-125A1 on chromosome 2, complete sequence Length = 196421 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 19971 tcctccccgtcctcctcctcct 19950 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 19950 tcctccccgtcctcctcctcct 19929 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctc 84 |||||||||||||||||||| Sbjct: 19932 tcctccccgtcctcctcctc 19913
>emb|AL626786.11| Mouse DNA sequence from clone RP23-269L6 on chromosome X, complete sequence Length = 156879 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcct 86 |||||||||||||||||||||| Sbjct: 46366 tcctccccgtcctcctcctcct 46345
>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence Length = 156084 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 ||||| || |||||||||||||||||||| Sbjct: 90403 tcctctccctcctcctcctcctttccctc 90431
>gb|AC141630.3| Mus musculus BAC clone RP24-243P7 from chromosome 14, complete sequence Length = 184075 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 21342 cctccccgtcctcctcctcct 21322
>gb|AC107757.15| Mus musculus chromosome 15, clone RP23-207L14, complete sequence Length = 208483 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 92729 tcctcctcttcctcctcctcctttccctc 92701
>gb|AC115634.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1653_D06, complete sequence Length = 71193 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 16396 cctccccgtcctcctcctcct 16416
>gb|AC161870.4| Mus musculus BAC clone RP24-70M22 from chromosome 14, complete sequence Length = 240578 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 152158 cctccccgtcctcctcctcct 152138
>ref|XM_480927.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2202 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 227 tcctccccgtcctcctcctcc 247
>ref|XM_507175.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0087F21.45 mRNA Length = 2257 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 275 tcctccccgtcctcctcctcc 295
>ref|XM_464813.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1716 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 30 cctccccgtcctcctcctcct 50
>ref|NM_196016.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0076H04.9), mRNA Length = 1137 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 82 cctccccgtcctcctcctcct 62
>ref|XM_473851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2604 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccgtcctccccgtcctcctcctcct 86 ||||||||| ||||||||||||||| Sbjct: 215 ccgtcctcctcgtcctcctcctcct 191
>gb|AY290810.1| Atherina hepsetus cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 645 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gtcctcctcctcctttccctc 93 ||||||||||||||||||||| Sbjct: 517 gtcctcctcctcctttccctc 537
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 184064 cctccccgtcctcctcctcct 184084
>gb|AC153638.4| Mus musculus 6 BAC RP23-416H6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 171957 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 164799 tcctcctcttcctcctcctcctttccctc 164827
>gb|AC139225.10| Mus musculus chromosome 9, clone RP24-361G12, complete sequence Length = 196867 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcctt 87 |||||||| |||||||||||||||| Sbjct: 16315 cgtcctcctcgtcctcctcctcctt 16339
>gb|AC124624.13| Mus musculus chromosome 5, clone RP23-417K9, complete sequence Length = 192261 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||| |||||| Sbjct: 56093 tcctccccctcctcctcctcctctccctc 56065
>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 237425 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 209536 tcctcctcctcctcctcctcctttccctc 209564
>gb|AY327397.1| Basileuterus fulvicauda NADH dehydrogenase subunit 2, cytochrome oxidase subunit I, cytochrome oxidase subunit II, ATP-synthase 8, and ATP-synthase 6 genes, complete cds; mitochondrial Length = 4694 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gtcctcctcctcctttccctc 93 ||||||||||||||||||||| Sbjct: 1979 gtcctcctcctcctttccctc 1999
>gb|AY327392.1| Basileuterus fulvicauda NADH dehydrogenase subunit 2, cytochrome oxidase subunit I, cytochrome oxidase subunit II, ATP-synthase 8, and ATP-synthase 6 genes, complete cds; mitochondrial Length = 4695 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gtcctcctcctcctttccctc 93 ||||||||||||||||||||| Sbjct: 1979 gtcctcctcctcctttccctc 1999
>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete sequence Length = 190328 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||| |||||| Sbjct: 99675 tcctccccctcctcctcctcctctccctc 99703
>gb|AC087598.3| Papio anubis clone RP41-416C2, complete sequence Length = 140358 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 27560 cctccccgtcctcctcctcct 27580
>gb|AF228729.3| Homo sapiens chromosome 8 clone RP11-101A8 map q21.11, complete sequence Length = 101448 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttc 89 |||||||| |||||||||||||||| Sbjct: 34721 tcctccccatcctcctcctcctttc 34745
>gb|AF188027.5| Homo sapiens chromosome 8 clone RP11-101A8 map q21.11, complete sequence Length = 146199 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttc 89 |||||||| |||||||||||||||| Sbjct: 64172 tcctccccatcctcctcctcctttc 64196
>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence Length = 159429 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctcgccgctttctcc 105 |||||| | ||||||||||||||| |||| || |||||||| Sbjct: 79269 tcctcctcctcctcctcctccttttcctcccctctttctcc 79229
>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence Length = 187598 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctcgccgctttctcc 105 |||||| | ||||||||||||||| |||| || |||||||| Sbjct: 120884 tcctcctcctcctcctcctccttttcctcccctctttctcc 120844
>gb|AC111117.15| Mus musculus chromosome 1, clone RP23-214P23, complete sequence Length = 201442 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gtcctcctcctcctttccctc 93 ||||||||||||||||||||| Sbjct: 97891 gtcctcctcctcctttccctc 97911
>gb|DQ483426.1| Gymnogyps californianus clone 129H microsatellite sequence Length = 991 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||| |||||||| Sbjct: 103 tcctccccatcctcctcctcttttccctc 131
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 60 ccccgtcctccccgtcctcctcctc 84 |||||||||||||||||||| |||| Sbjct: 132644 ccccgtcctccccgtcctccgcctc 132620 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcctc 84 |||||||||||||||||||| |||| Sbjct: 105574 ccccgtcctccccgtcctccgcctc 105598
>gb|AC175741.5| Mus musculus chromosome 1, clone wi1-1093I15, complete sequence Length = 39340 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 ||||| || |||||||||||||||||||| Sbjct: 19332 tcctctccctcctcctcctcctttccctc 19360
>gb|AC123817.4| Mus musculus BAC clone RP24-255D13 from chromosome 9, complete sequence Length = 169614 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcctt 87 |||||||| |||||||||||||||| Sbjct: 140307 cgtcctcctcgtcctcctcctcctt 140331
>gb|AC132221.3| Mus musculus BAC clone RP24-545C12 from chromosome 12, complete sequence Length = 198084 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 ccccgtcctcctcctcctttccctc 93 |||| |||||||||||||||||||| Sbjct: 196713 ccccctcctcctcctcctttccctc 196737
>gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosome 10, complete sequence Length = 179668 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| |||||||||||||| ||||| Sbjct: 65355 tcctccccctcctcctcctccttcccctc 65383
>gb|AC132600.3| Mus musculus BAC clone RP24-134A5 from chromosome 3, complete sequence Length = 160339 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 73536 tcctccccgtcctcctcctcc 73516
>gb|AC109225.13| Mus musculus chromosome 19, clone RP23-395B21, complete sequence Length = 257062 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 92493 tcctcctcctcctcctcctcctttccctc 92465
>gb|AC160462.6| Mus musculus chromosome 1, clone RP23-225K21, complete sequence Length = 197253 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcctt 87 |||||||| |||||||||||||||| Sbjct: 47758 cgtcctcctcgtcctcctcctcctt 47782
>gb|AC156645.2| Mus musculus BAC clone RP23-59I22 from chromosome 12, complete sequence Length = 247201 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 ccccgtcctcctcctcctttccctc 93 |||| |||||||||||||||||||| Sbjct: 76558 ccccctcctcctcctcctttccctc 76582
>gb|AC161275.6| Mus musculus BAC clone RP23-11E12 from chromosome 14, complete sequence Length = 237179 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 163621 tcctcctcctcctcctcctcctttccctc 163593
>emb|AL590669.11| Human DNA sequence from clone RP11-76K24 on chromosome 1 Contains the gene for a novel protein (FLJ35728) and a CpG island, complete sequence Length = 169226 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 ||||||| |||||||||||||||||||| Sbjct: 135027 tcctccctctcctcctcctcctttccctc 135055
>emb|AL663115.11| Mouse DNA sequence from clone RP23-452C23 on chromosome 11 Contains the gene for a novel protein simialr to cell division cycle associated 4 Cdca4, a ribosomal protein L15 (Rpl15) pseudogene, the 3' end of a novel gene and two CpG islands, complete sequence Length = 183089 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 52116 tcctccccgtcctcctcctcc 52096
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ccgtcctccccgtcctcctcctcct 86 ||||||||| ||||||||||||||| Sbjct: 88503 ccgtcctcctcgtcctcctcctcct 88527
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete sequence Length = 141050 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 47622 cctccccgtcctcctcctcct 47642
>gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, complete sequence Length = 167258 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 82716 tcctccccgtcctcctcctcc 82736
>gb|AC087627.10| Homo sapiens chromosome 8, clone RP11-641K18, complete sequence Length = 170211 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttc 89 |||||||| |||||||||||||||| Sbjct: 16698 tcctccccatcctcctcctcctttc 16674
>gb|AC027285.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-40I5, complete sequence Length = 241886 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 62660 tcctcctcttcctcctcctcctttccctc 62688
>gb|AC164576.4| Mus musculus 10 BAC RP23-50F14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205209 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 69462 tcctcctcctcctcctcctcctttccctc 69434
>gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231946 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 2902 tcctcctcttcctcctcctcctttccctc 2930
>gb|AC087792.7| Homo sapiens chromosome 8, clone RP1-16A9, complete sequence Length = 101448 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttc 89 |||||||| |||||||||||||||| Sbjct: 66728 tcctccccatcctcctcctcctttc 66704
>gb|AC154847.2| Mus musculus BAC clone RP23-38J13 from chromosome 13, complete sequence Length = 200027 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttc 89 |||||||| |||||||||||||||| Sbjct: 95425 tcctccccctcctcctcctcctttc 95401
>gb|AC133096.3| Mus musculus BAC clone RP23-271C13 from chromosome 1, complete sequence Length = 195512 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 ||||||||||| ||||||||||| ||||| Sbjct: 129591 tcctccccgtcttcctcctccttcccctc 129563
>gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213412 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 163986 tcctcctcctcctcctcctcctttccctc 163958
>gb|AC158630.5| Mus musculus 10 BAC RP23-440F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191380 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||||||||||||| |||| ||||| Sbjct: 97693 tcctccccgtcctcctcccccttcccctc 97665 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcctttccctc 93 ||||||||||||||||| |||| ||||| Sbjct: 97635 cctccccgtcctcctcccccttcccctc 97608
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ccgtcctccccgtcctcctcctcct 86 ||||||||| ||||||||||||||| Sbjct: 30991130 ccgtcctcctcgtcctcctcctcct 30991154
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ccgtcctccccgtcctcctcc 82 ||||||||||||||||||||| Sbjct: 19845283 ccgtcctccccgtcctcctcc 19845263 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 8671885 tcctccccgtcctcctcctcc 8671905
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 10799464 cctccccgtcctcctcctcct 10799484 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ctccccgtcctcctcctcct 86 |||||||||||||||||||| Sbjct: 16154174 ctccccgtcctcctcctcct 16154193
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 8357992 cctccccgtcctcctcctcct 8358012 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ctccccgtcctcctcctcct 86 |||||||||||||||||||| Sbjct: 29644405 ctccccgtcctcctcctcct 29644424 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ctccccgtcctcctcctcct 86 |||||||||||||||||||| Sbjct: 15537344 ctccccgtcctcctcctcct 15537325 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 cccgtcctccccgtcctcctcctc 84 ||||||||| |||||||||||||| Sbjct: 11477811 cccgtcctcgccgtcctcctcctc 11477788
>gb|AC009213.5|AC009213 Drosophila melanogaster, chromosome 3R, region 98D-98D, BAC clone BACR09F18, complete sequence Length = 182525 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ctccccgtcctcctcctcctt 87 ||||||||||||||||||||| Sbjct: 109306 ctccccgtcctcctcctcctt 109286
>gb|AC092791.2| Homo sapiens BAC clone RP11-795L3 from 2, complete sequence Length = 133651 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 18952 tcctcctcctcctcctcctcctttccctc 18924
>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226538 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||| |||||| Sbjct: 16331 tcctccccctcctcctcctcctctccctc 16303
>gb|AC152939.2| Mus musculus BAC clone RP23-312I2 from chromosome 7, complete sequence Length = 205980 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 ||||||||||||||||| ||||| ||||| Sbjct: 122204 tcctccccgtcctcctcttccttcccctc 122176
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ccgtcctccccgtcctcctcc 82 ||||||||||||||||||||| Sbjct: 13461 ccgtcctccccgtcctcctcc 13441
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 tggaccccgtcctccccgtcctcctcctc 84 |||||||| |||| ||||||||||||||| Sbjct: 20864 tggaccccctccttcccgtcctcctcctc 20836
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 183796 tcctccccgtcctcctcctcc 183816
>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011N12 Length = 158586 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 10842 cctccccgtcctcctcctcct 10862
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 134663 cctccccgtcctcctcctcct 134683
>gb|AC153610.3| Mus musculus 6 BAC RP23-271E2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 177392 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcctt 87 |||||||| |||||||||||||||| Sbjct: 100475 cgtcctcctcgtcctcctcctcctt 100451
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ccgtcctccccgtcctcctcc 82 ||||||||||||||||||||| Sbjct: 174234 ccgtcctccccgtcctcctcc 174214
>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0070J06 Length = 142303 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 14864 tcctccccgtcctcctcctcc 14884
>dbj|AK121231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092L21, full insert sequence Length = 720 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 115 cctccccgtcctcctcctcct 135
>dbj|AK102151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086D21, full insert sequence Length = 1518 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 72 cctccccgtcctcctcctcct 92
>dbj|AK100672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112N09, full insert sequence Length = 3130 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccgtcctccccgtcctcctcctcct 86 ||||||||| ||||||||||||||| Sbjct: 394 ccgtcctcctcgtcctcctcctcct 370
>dbj|AK099922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116M03, full insert sequence Length = 2203 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 228 tcctccccgtcctcctcctcc 248
>emb|CT573086.9| Mouse DNA sequence from clone RP23-163K5 on chromosome 16, complete sequence Length = 208384 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||| |||||| Sbjct: 65750 tcctccccctcctcctcctcctctccctc 65778
>dbj|AK072918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149C16, full insert sequence Length = 2289 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcctc 84 |||| |||||||||||||||||||| Sbjct: 20 ccccctcctccccgtcctcctcctc 44
>dbj|AK069624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025F15, full insert sequence Length = 2239 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gtcctcctcctcctttccctc 93 ||||||||||||||||||||| Sbjct: 1 gtcctcctcctcctttccctc 21
>dbj|AK068874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170C15, full insert sequence Length = 2258 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 276 tcctccccgtcctcctcctcc 296
>emb|CT573000.9| Mouse DNA sequence from clone RP24-326F11 on chromosome 16, complete sequence Length = 172709 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 78063 tcctcctcttcctcctcctcctttccctc 78091
>gb|AE003766.2| Drosophila melanogaster chromosome 3R, section 104 of 118 of the complete sequence Length = 232302 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ctccccgtcctcctcctcctt 87 ||||||||||||||||||||| Sbjct: 696 ctccccgtcctcctcctcctt 676
>emb|AL139316.5|CNS01DXH Human chromosome 14 DNA sequence BAC R-698F20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192440 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcctt 87 |||||||||| |||||||||||||| Sbjct: 132369 cgtcctccccctcctcctcctcctt 132393
>gb|AC102657.13| Mus musculus chromosome 10, clone RP23-15N10, complete sequence Length = 186954 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||||||||||||| |||| ||||| Sbjct: 169242 tcctccccgtcctcctcccccttcccctc 169270
>dbj|AB096012.1| Oryza sativa (japonica cultivar-group) SIG6 mRNA for Sig6, complete cds Length = 1720 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 100 tcctccccgtcctcctcctcc 120
>emb|CT030660.14| Mouse DNA sequence from clone RP23-455F4 on chromosome 13, complete sequence Length = 174127 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 2201 tcctcctcttcctcctcctcctttccctc 2229
>emb|AL845274.17| Mouse DNA sequence from clone RP23-146F24 on chromosome 2, complete sequence Length = 230151 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 57177 tcctcctcctcctcctcctcctttccctc 57205
>gb|AC149607.6| Mus musculus BAC clone RP23-455C13 from chromosome 7, complete sequence Length = 206284 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 ||||||||||||||||| ||||| ||||| Sbjct: 186599 tcctccccgtcctcctcttccttcccctc 186627
>emb|AL731766.27| Mouse DNA sequence from clone RP23-78B19 on chromosome 4, complete sequence Length = 144885 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||||| |||| Sbjct: 24829 tcctccccttcctcctcctccttttcctc 24801
>gb|AC173208.2| Mus musculus BAC clone RP24-335A2 from chromosome 16, complete sequence Length = 234813 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||| |||||| Sbjct: 53706 tcctccccctcctcctcctcctctccctc 53678
>gb|AC134455.3| Mus musculus BAC clone RP23-294B15 from 14, complete sequence Length = 186427 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 84953 tcctcctcctcctcctcctcctttccctc 84925
>gb|AC127291.4| Mus musculus BAC clone RP23-365H24 from 8, complete sequence Length = 208452 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 159838 tcctcctcctcctcctcctcctttccctc 159810
>emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on chromosome 2, complete sequence Length = 217148 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||| |||||| Sbjct: 24889 tcctccccttcctcctcctcctctccctc 24861
>gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosome 6, complete sequence Length = 185966 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 81146 cctccccgtcctcctcctcct 81166 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 81062 cctccccgtcctcctcctcct 81082 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 80963 cctccccgtcctcctcctcct 80983 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 80855 cctccccgtcctcctcctcct 80875 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cctccccgtcctcctcctcc 85 |||||||||||||||||||| Sbjct: 80942 cctccccgtcctcctcctcc 80961
>gb|AC171197.1| Mus musculus BAC clone RP23-216J7 from chromosome 5, complete sequence Length = 211677 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||| |||||| Sbjct: 148298 tcctccccctcctcctcctcctctccctc 148270
>emb|AL929456.11| Mouse DNA sequence from clone RP23-26K1 on chromosome 4, complete sequence Length = 59271 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 26216 cctccccgtcctcctcctcct 26196
>emb|AL929178.7| Mouse DNA sequence from clone RP23-77M17 on chromosome 2, complete sequence Length = 100057 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcct 86 ||||||||||||||||||||| Sbjct: 97428 cctccccgtcctcctcctcct 97408
>emb|AL671854.14| Mouse DNA sequence from clone RP23-89M15 on chromosome 3, complete sequence Length = 207265 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||| |||||| Sbjct: 121027 tcctccccctcctcctcctcctctccctc 120999
>emb|AL773592.5| Mouse DNA sequence from clone RP23-336B11 on chromosome 4, complete sequence Length = 219956 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||||| |||| Sbjct: 2300 tcctccccctcctcctcctccttttcctc 2272
>emb|AL831790.3| Mouse DNA sequence from clone RP23-334I5 on chromosome 4, complete sequence Length = 206074 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||| |||||| Sbjct: 202268 tcctccccctcctcctcctcctctccctc 202296
>emb|AL645723.11| Mouse DNA sequence from clone RP23-423N6 on chromosome 4, complete sequence Length = 220638 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||||| ||||||||||||||| |||| Sbjct: 208541 tcctccccctcctcctcctccttttcctc 208513
>gb|AC139856.12| Mus musculus chromosome 8, clone RP23-52J10, complete sequence Length = 212906 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccctc 93 |||||| | |||||||||||||||||||| Sbjct: 144966 tcctcctcctcctcctcctcctttccctc 144994 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 145005 tcctcctcctcctttccctc 145024
>gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermediate transcription control protein (BICP4) gene, complete cds Length = 8113 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 60 ccccgtcctccccgtcctcctcctc 84 |||||||||||||||||||| |||| Sbjct: 5457 ccccgtcctccccgtcctccgcctc 5433
>emb|AL663079.9| Mouse DNA sequence from clone RP23-273C14 on chromosome 11, complete sequence Length = 119796 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcc 85 ||||||||||||||||||||| Sbjct: 81190 tcctccccgtcctcctcctcc 81210
>emb|AL671671.5| Mouse DNA sequence from clone RP23-419D6 on chromosome 4, complete sequence Length = 102298 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 ccccgtcctcctcctcctttccctc 93 |||| |||||||||||||||||||| Sbjct: 60464 ccccctcctcctcctcctttccctc 60488 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 60526 tcctcctcctcctttccctc 60545
>gb|AC110222.9| Mus musculus chromosome 3, clone RP24-211P23, complete sequence Length = 179958 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 95913 tcctcctcctcctttccctc 95894
>gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, complete sequence Length = 161257 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctc 84 |||||||||||||||||||| Sbjct: 61671 tcctccccgtcctcctcctc 61652
>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence Length = 190298 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcctttc 89 ||||||| |||||||||||||||| Sbjct: 68201 cctccccttcctcctcctcctttc 68178
>gb|AC115058.17| Mus musculus chromosome 5, clone RP24-381E3, complete sequence Length = 187046 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 16087 tcctcctcctcctttccctc 16068
>gb|AC120173.9| Mus musculus chromosome 1, clone RP24-485J8, complete sequence Length = 189779 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 34704 tcctcctcctcctttccctc 34723
>gb|AC152957.1| Mus musculus 6 BAC RP23-353I5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203225 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 65942 cgtcctcctcgtcctcctcctcct 65965
>ref|XM_528666.1| PREDICTED: Pan troglodytes similar to KIAA1076 protein (LOC473295), mRNA Length = 6018 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctc 84 |||||||||||||||||||| Sbjct: 3599 tcctccccgtcctcctcctc 3580
>gb|AC158391.2| Mus musculus BAC clone RP23-441C8 from chromosome 17, complete sequence Length = 203548 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 60 ccccgtcctccccgtcctcctcctcctt 87 |||| |||||||| |||||||||||||| Sbjct: 78096 ccccttcctccccctcctcctcctcctt 78069
>gb|AC133517.6| Mus musculus BAC clone RP23-136I9 from chromosome 14, complete sequence Length = 196833 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 152772 tcctcctcctcctttccctc 152791
>gb|DQ215367.1| Taeniopygia guttata clone 0058P0053F04 natural killer cell-specific antigen KLIP1-like mRNA, complete sequence Length = 1504 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ctccccgtcctcctcctcct 86 |||||||||||||||||||| Sbjct: 314 ctccccgtcctcctcctcct 295
>ref|XM_465486.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1021 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ctccccgtcctcctcctcct 86 |||||||||||||||||||| Sbjct: 70 ctccccgtcctcctcctcct 89
>ref|XM_465098.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1605 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 cccgtcctccccgtcctcctcctc 84 ||||||||| |||||||||||||| Sbjct: 304 cccgtcctcgccgtcctcctcctc 281
>ref|XM_463261.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2049 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 tccctcgccgctttctccgctgcctccg 115 ||||||||||| ||||||||| |||||| Sbjct: 149 tccctcgccgccttctccgctccctccg 176
>gb|AC165144.2| Mus musculus BAC clone RP24-441D9 from chromosome 14, complete sequence Length = 153364 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 77183 tcctcctcctcctttccctc 77164 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 77162 tcctcctcctcctttccctc 77143 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 77057 tcctcctcctcctttccctc 77038 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 77036 tcctcctcctcctttccctc 77017
>ref|XM_477310.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2973 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 218 cgtcctcctcgtcctcctcctcct 241
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ctccccgtcctcctcctcct 86 |||||||||||||||||||| Sbjct: 1531 ctccccgtcctcctcctcct 1550
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ctccccgtcctcctcctcct 86 |||||||||||||||||||| Sbjct: 105344 ctccccgtcctcctcctcct 105363
>gb|AY442518.1| Infectious hematopoietic necrosis virus strain WRAC nucleoprotein (N) gene, complete cds Length = 1298 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 1177 cgtcctcctcgtcctcctcctcct 1154
>gb|AY442516.1| Infectious hematopoietic necrosis virus strain RB-76 nucleoprotein (N) gene, complete cds Length = 1296 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 1177 cgtcctcctcgtcctcctcctcct 1154
>gb|AY442515.1| Infectious hematopoietic necrosis virus strain LWS-87 nucleoprotein (N) gene, complete cds Length = 1297 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 1177 cgtcctcctcgtcctcctcctcct 1154
>gb|AY442511.1| Infectious hematopoietic necrosis virus strain CST-82 nucleoprotein (N) gene, complete cds Length = 1298 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 1177 cgtcctcctcgtcctcctcctcct 1154
>gb|AY442508.1| Infectious hematopoietic necrosis virus strain Carson-89 nucleoprotein (N) gene, complete cds Length = 1297 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 1177 cgtcctcctcgtcctcctcctcct 1154
>gb|AY438975.1| Infectious hematopoietic necrosis virus strain LB91KI nucleoprotein (N) gene, complete cds Length = 1297 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 1177 cgtcctcctcgtcctcctcctcct 1154
>gb|BC077621.1| Xenopus laevis CDC45 cell division cycle 45-like (S. cerevisiae), mRNA (cDNA clone MGC:84655 IMAGE:6861692), complete cds Length = 1967 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctc 84 |||||||||||||||||||| Sbjct: 444 tcctccccgtcctcctcctc 425
>gb|AF126749.1| Homo sapiens SCA8 mRNA, repeat region Length = 1472 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||||||||| ||||||| Sbjct: 252 cgtcctccccgtcctcttcctcct 229
>gb|AF252279.1| Homo sapiens SCA8 gene, partial sequence; and Kelch-like 1 protein (KLHL1) gene, partial cds Length = 166350 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||||||||| ||||||| Sbjct: 55714 cgtcctccccgtcctcttcctcct 55737
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 191462 cgtcctcctcgtcctcctcctcct 191485
>gb|AY023099.1| Oryza sativa microsatellite MRG5424 containing (GAG)X9, closest to marker RG324, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ctccccgtcctcctcctcct 86 |||||||||||||||||||| Sbjct: 136 ctccccgtcctcctcctcct 117
>gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1434D10 map near E1419S, complete sequence Length = 133421 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 tccctcgccgctttctccgctgcctccg 115 ||||||||||| ||||||||| |||||| Sbjct: 130398 tccctcgccgccttctccgctccctccg 130425
>gb|AC156992.13| Mus musculus chromosome 7, clone RP23-474C17, complete sequence Length = 178169 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcctttccctc 93 ||||||| |||||||| ||||||||||| Sbjct: 55450 cctccccctcctcctcttcctttccctc 55423
>gb|BC036690.1| Homo sapiens lemur tyrosine kinase 3, mRNA (cDNA clone IMAGE:5261248), partial cds Length = 2582 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcc 82 |||||||||||||||||||| Sbjct: 1524 cgtcctccccgtcctcctcc 1505
>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence Length = 166568 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 131003 tcctcctcctcctttccctc 130984
>gb|AC160136.2| Mus musculus BAC clone RP23-125E11 from chromosome 16, complete sequence Length = 192119 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 173382 cgtcctcctcgtcctcctcctcct 173359
>gb|AC166161.2| Mus musculus BAC clone RP23-467M7 from chromosome 17, complete sequence Length = 186311 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcctcctt 87 |||| |||||||| |||||||||||||| Sbjct: 54778 ccccctcctccccctcctcctcctcctt 54805
>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence Length = 182534 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcc 79 |||||||||||||||||||| Sbjct: 145171 ccccgtcctccccgtcctcc 145190 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcc 79 |||||||||||||||||||| Sbjct: 145162 ccccgtcctccccgtcctcc 145181
>gb|AC104917.9| Mus musculus chromosome 1, clone RP23-329F7, complete sequence Length = 205999 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 197756 cgtcctcctcgtcctcctcctcct 197779 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 197714 cgtcctcctcgtcctcctcctcct 197737
>gb|AC119197.9| Mus musculus chromosome 8, clone RP24-180H20, complete sequence Length = 150207 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 30482 tcctcctcctcctttccctc 30501
>gb|AY673683.1| Infectious hematopoietic necrosis virus nucleocapsid protein mRNA, complete cds Length = 1347 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 1233 cgtcctcctcgtcctcctcctcct 1210
>ref|XM_417816.1| PREDICTED: Gallus gallus similar to dJ1174N9.1 (novel protein with IBR domain) (LOC419669), mRNA Length = 2223 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 62 ccgtcctccccgtcctcctcctcctttccctc 93 ||||||||| | ||||||||||||| |||||| Sbjct: 1688 ccgtcctcctcttcctcctcctcctctccctc 1657
>ref|XM_367217.1| Magnaporthe grisea 70-15 hypothetical protein (MG07142.4) partial mRNA Length = 888 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||||||||| ||||||| Sbjct: 709 cgtcctccccgtcctcatcctcct 686
>ref|XM_417027.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ22054 isoform 1 (LOC418831), mRNA Length = 1941 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcct 83 |||| ||||||||||||||||||| Sbjct: 80 ccccttcctccccgtcctcctcct 103
>gb|AC147985.3| Mus musculus BAC clone RP24-402C11 from chromosome 19, complete sequence Length = 170479 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 accccgtcctccccgtcctcctcctcct 86 ||||| |||||||| ||||||||||||| Sbjct: 71588 accccctcctccccctcctcctcctcct 71615
>gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosome 8, complete sequence Length = 151221 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 49694 cgtcctcctcgtcctcctcctcct 49717
>ref|XM_323210.1| Neurospora crassa OR74A hypothetical protein (NCU03892.1) partial mRNA Length = 3132 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 2945 tcctcctcctcctttccctc 2926
>ref|XM_952438.1| Neurospora crassa OR74A hypothetical protein (NCU03892.1) partial mRNA Length = 3132 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 2945 tcctcctcctcctttccctc 2926
>ref|XM_955354.1| Neurospora crassa OR74A hypothetical protein (NCU05485.1) partial mRNA Length = 1002 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 220 cgtcctcctcgtcctcctcctcct 197
>gb|AC139211.13| Mus musculus chromosome 6, clone RP23-302O24, complete sequence Length = 154129 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||| ||||||||||||| Sbjct: 32726 cgtcctccccctcctcctcctcct 32749
>ref|XM_959012.1| Neurospora crassa OR74A hypothetical protein (NCU02111.1) partial mRNA Length = 3708 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ctccccgtcctcctcctcct 86 |||||||||||||||||||| Sbjct: 3419 ctccccgtcctcctcctcct 3438
>ref|XM_325339.1| Neurospora crassa OR74A hypothetical protein (NCU05485.1) partial mRNA Length = 1002 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 220 cgtcctcctcgtcctcctcctcct 197
>gb|AC115236.4| Rattus norvegicus 15 BAC CH230-87I6 (Children's Hospital Oakland Research Institute) complete sequence Length = 151341 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcctttccctc 93 ||||||||||| ||||||||| |||||| Sbjct: 95284 cctccccgtccccctcctcctctccctc 95257
>ref|XM_329300.1| Neurospora crassa OR74A hypothetical protein (NCU02111.1) partial mRNA Length = 3708 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ctccccgtcctcctcctcct 86 |||||||||||||||||||| Sbjct: 3419 ctccccgtcctcctcctcct 3438
>gb|AC134332.2| Mus musculus BAC clone RP24-385N13 from chromosome 1, complete sequence Length = 124525 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 1110 cgtcctcctcgtcctcctcctcct 1087
>gb|AC131800.4| Mus musculus BAC clone RP24-535O17 from chromosome 17, complete sequence Length = 162701 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcctcctt 87 |||| |||||||| |||||||||||||| Sbjct: 126113 ccccctcctccccctcctcctcctcctt 126140
>ref|NM_001005511.1| Mus musculus lemur tyrosine kinase 3 (Lmtk3), mRNA Length = 5022 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcc 82 |||||||||||||||||||| Sbjct: 3980 cgtcctccccgtcctcctcc 3961
>ref|XM_654744.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2232.2), mRNA Length = 1584 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 tcaaactcgtcatctccctgtcat 29 ||||||||||||||| |||||||| Sbjct: 689 tcaaactcgtcatcttcctgtcat 712
>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence Length = 385816 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcc 79 |||||||||||||||||||| Sbjct: 260007 ccccgtcctccccgtcctcc 260026
>gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, complete sequence Length = 218875 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 116867 cgtcctcctcgtcctcctcctcct 116844
>gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-446B13, complete sequence Length = 205177 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctccttt 88 |||||||| ||||||||||||||| Sbjct: 101849 tcctccccctcctcctcctccttt 101826
>gb|AC166829.3| Mus musculus BAC clone RP23-299M19 from chromosome 1, complete sequence Length = 211292 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 60 ccccgtcctccccgtcctcctcctcctt 87 |||| |||||||| |||||||||||||| Sbjct: 18125 ccccctcctccccctcctcctcctcctt 18098
>gb|AY207500.1| Chlamydomonas reinhardtii CR074 protein gene, complete cds Length = 6333 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 66 cctccccgtcctcctcctcctttccctcgccg 97 |||| |||||||||||||||| ||||||||| Sbjct: 3201 cctcgccgtcctcctcctcctcgccctcgccg 3170
>gb|AC115064.9| Mus musculus chromosome 1, clone RP24-401B18, complete sequence Length = 184893 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctc 84 |||||||||||||||||||| Sbjct: 173725 tcctccccgtcctcctcctc 173706
>gb|AC165962.4| Mus musculus BAC clone RP23-362B7 from chromosome 17, complete sequence Length = 179745 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccct 92 |||||| | ||||||||||||||||||| Sbjct: 42697 tcctcctcctcctcctcctcctttccct 42724
>gb|BC083185.1| Mus musculus lemur tyrosine kinase 3, mRNA (cDNA clone MGC:90743 IMAGE:6855048), complete cds Length = 5022 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcc 82 |||||||||||||||||||| Sbjct: 3980 cgtcctccccgtcctcctcc 3961
>gb|BC094377.1| Mus musculus lemur tyrosine kinase 3, mRNA (cDNA clone MGC:106696 IMAGE:30536822), complete cds Length = 4846 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcc 82 |||||||||||||||||||| Sbjct: 3825 cgtcctccccgtcctcctcc 3806
>gb|BC059845.1| Mus musculus lemur tyrosine kinase 3, mRNA (cDNA clone IMAGE:6844183) Length = 5107 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcc 82 |||||||||||||||||||| Sbjct: 4030 cgtcctccccgtcctcctcc 4011
>gb|BC057032.1| Mus musculus lemur tyrosine kinase 3, mRNA (cDNA clone IMAGE:6834132) Length = 4736 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcc 82 |||||||||||||||||||| Sbjct: 3713 cgtcctccccgtcctcctcc 3694
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 88 tccctcgccgctttctccgctgcctccg 115 ||||||||||| ||||||||| |||||| Sbjct: 23773501 tccctcgccgccttctccgctccctccg 23773474
>gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosome 8, complete sequence Length = 211773 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctcctttccct 92 |||||||| ||||||||||||| ||||| Sbjct: 109108 tcctccccctcctcctcctcctctccct 109081
>gb|AC154647.2| Mus musculus BAC clone RP23-283P8 from chromosome 17, complete sequence Length = 208252 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 16595 tcctcctcctcctttccctc 16576
>gb|AC166058.2| Mus musculus BAC clone RP23-343A20 from chromosome 17, complete sequence Length = 212262 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 17803 cgtcctcctcgtcctcctcctcct 17826
>gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, complete sequence Length = 255501 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 55831 cgtcctcctcgtcctcctcctcct 55854
>gb|AC133451.14| Mus musculus chromosome 19, clone RP24-91H12, complete sequence Length = 184265 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcct 83 ||||||||||||| |||||||||| Sbjct: 35122 ccccgtcctccccctcctcctcct 35145
>gb|AC141882.3| Mus musculus BAC clone RP24-177O3 from chromosome 17, complete sequence Length = 173120 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 94219 tcctcctcctcctttccctc 94238
>gb|AC126937.3| Mus musculus BAC clone RP24-250G8 from chromosome 17, complete sequence Length = 150579 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 58 gaccccgtcctccccgtcctcctcctcctttccctc 93 |||||| |||||| | |||| ||||||||||||||| Sbjct: 44669 gaccccttcctcctcctccttctcctcctttccctc 44704
>gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, complete sequence Length = 202151 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 191487 cgtcctcctcgtcctcctcctcct 191510
>gb|AC148094.1| Mus musculus chromosome UNK clone RP24-497G1, complete sequence Length = 164650 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcctcctcctttccctc 93 |||||||||||||||||||| Sbjct: 45321 tcctcctcctcctttccctc 45340
>gb|AC139940.5| Mus musculus chromosome 15, clone RP23-468K16, complete sequence Length = 212183 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctcctttccct 92 |||||| | ||||||||||||||||||| Sbjct: 80220 tcctcctcctcctcctcctcctttccct 80247
>gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, complete sequence Length = 205429 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 60 ccccgtcctccccgtcctcctcctcctt 87 |||| |||||||| |||||||||||||| Sbjct: 71117 ccccctcctccccctcctcctcctcctt 71090
>gb|AC124237.13| Mus musculus chromosome 17, clone RP23-281A8, complete sequence Length = 200410 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 ccccgtcctccccgtcctcctcctcctt 87 |||| |||||||| |||||||||||||| Sbjct: 153866 ccccctcctccccctcctcctcctcctt 153893
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcc 82 |||||||||||||||||||| Sbjct: 135111 cgtcctccccgtcctcctcc 135092 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcc 82 |||||||||||||||||||| Sbjct: 107902 cgtcctccccgtcctcctcc 107921
>gb|DQ483615.1| Gymnogyps californianus clone 38F microsatellite sequence Length = 684 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctccttt 88 |||||| ||||||||||||||||| Sbjct: 88 tcctcctcgtcctcctcctccttt 65
>gb|DQ484026.1| Gymnogyps californianus clone 192G microsatellite sequence Length = 1004 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctccttt 88 |||||||| ||||||||||||||| Sbjct: 894 tcctccccctcctcctcctccttt 917
>gb|DQ483964.1| Gymnogyps californianus clone 130G microsatellite sequence Length = 731 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctccttt 88 |||||| ||||||||||||||||| Sbjct: 627 tcctcctcgtcctcctcctccttt 650
>gb|DQ483413.1| Gymnogyps californianus clone 116H microsatellite sequence Length = 545 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 tcctccccgtcctcctcctccttt 88 |||||||| ||||||||||||||| Sbjct: 111 tcctccccctcctcctcctccttt 88
>ref|XM_542769.2| PREDICTED: Canis familiaris similar to potassium voltage-gated channel, subfamily H, member 8, transcript variant 1 (LOC485649), mRNA Length = 3512 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||| ||||||||||||| Sbjct: 2349 cgtcctccccttcctcctcctcct 2326
>ref|XM_858155.1| PREDICTED: Canis familiaris similar to potassium voltage-gated channel, subfamily H, member 8, transcript variant 5 (LOC485649), mRNA Length = 3554 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||| ||||||||||||| Sbjct: 2391 cgtcctccccttcctcctcctcct 2368
>ref|XM_858135.1| PREDICTED: Canis familiaris similar to potassium voltage-gated channel, subfamily H, member 8, transcript variant 4 (LOC485649), mRNA Length = 3488 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||| ||||||||||||| Sbjct: 2325 cgtcctccccttcctcctcctcct 2302
>ref|XM_858111.1| PREDICTED: Canis familiaris similar to potassium voltage-gated channel, subfamily H, member 8, transcript variant 3 (LOC485649), mRNA Length = 3497 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||| ||||||||||||| Sbjct: 2334 cgtcctccccttcctcctcctcct 2311
>ref|XM_858088.1| PREDICTED: Canis familiaris similar to potassium voltage-gated channel, subfamily H, member 8, transcript variant 2 (LOC485649), mRNA Length = 3584 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||| ||||||||||||| Sbjct: 2421 cgtcctccccttcctcctcctcct 2398
>ref|XM_755906.1| Ustilago maydis 521 hypothetical protein (UM04852.1) partial mRNA Length = 4362 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||| ||||||||||||| Sbjct: 617 cgtcctccccttcctcctcctcct 640
>emb|CT025652.7| Mouse DNA sequence from clone RP24-68J3 on chromosome 17, complete sequence Length = 226856 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 58 gaccccgtcctccccgtcctcctcctcctttccctc 93 |||||| |||||| | |||| ||||||||||||||| Sbjct: 225887 gaccccttcctcctcctccttctcctcctttccctc 225852
>emb|AL160391.13| Human DNA sequence from clone RP11-121J6 on chromosome 13, complete sequence Length = 166757 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||||||||||| ||||||| Sbjct: 36968 cgtcctccccgtcctcttcctcct 36945
>gb|AC139183.4| Mus musculus BAC clone RP24-114C21 from chromosome 18, complete sequence Length = 147109 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 tcctccccgtcctcctcctccttt 88 |||||||| ||||||||||||||| Sbjct: 124765 tcctccccctcctcctcctccttt 124788 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 110427 cgtcctcctcgtcctcctcctcct 110450
>gb|AC121913.3| Mus musculus BAC clone RP24-185E15 from chromosome 1, complete sequence Length = 163573 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgtcctccccgtcctcctcctcct 86 |||||||| ||||||||||||||| Sbjct: 75940 cgtcctcctcgtcctcctcctcct 75917 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,973,193 Number of Sequences: 3902068 Number of extensions: 2973193 Number of successful extensions: 257546 Number of sequences better than 10.0: 440 Number of HSP's better than 10.0 without gapping: 448 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 252108 Number of HSP's gapped (non-prelim): 5395 length of query: 347 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 325 effective length of database: 17,147,199,772 effective search space: 5572839925900 effective search space used: 5572839925900 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)