>gb|AC172194.1| Mus musculus BAC clone CH36-165I3 from chromosome 9, complete sequence
          Length = 197712

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 38     cttctccggtttccccctcac 58
              |||||||||||||||||||||
Sbjct: 145758 cttctccggtttccccctcac 145778

>gb|AC115905.8| Mus musculus chromosome 1, clone RP24-472N17, complete sequence
          Length = 173914

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 290 gccaagctaaagaacttgaggaag 313
           ||||||||||| ||||||||||||
Sbjct: 362 gccaagctaaataacttgaggaag 385

>gb|AC124821.5| Mus musculus chromosome 1, clone RP24-211L16, complete sequence
          Length = 185212

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 290   gccaagctaaagaacttgaggaag 313
             ||||||||||| ||||||||||||
Sbjct: 24099 gccaagctaaataacttgaggaag 24076

>gb|AC167720.2| Mus musculus BAC clone RP24-216G15 from chromosome 16, complete sequence
          Length = 172721

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    gcatgtataactagagagca 180
              ||||||||||||||||||||
Sbjct: 112154 gcatgtataactagagagca 112173

>gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, complete sequence
          Length = 195286

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tccattgtttcagcaacctg 148
              ||||||||||||||||||||
Sbjct: 171149 tccattgtttcagcaacctg 171130

>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06,
             complete sequence
          Length = 139139

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   ctgcatgctgctgctccatt 134
             ||||||||||||||||||||
Sbjct: 64971 ctgcatgctgctgctccatt 64952

>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24,
              Map qA7.1, complete sequences
          Length = 393632

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      ttctccatccatctatccac 27
              ||||||||||||||||||||
Sbjct: 230504 ttctccatccatctatccac 230523

>gb|AC186150.1| Ornithorhynchus anatinus chromosome UNK clone OABb-264K6, complete
             sequence
          Length = 149168

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 19    tctatccacgctgcttctgcttct 42
             |||||||||||||||||| |||||
Sbjct: 39107 tctatccacgctgcttcttcttct 39130

>gb|AC133937.3| Mus musculus BAC clone RP24-486L5 from chromosome 5, complete sequence
          Length = 209392

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      cttctccatccatctatcca 26
              ||||||||||||||||||||
Sbjct: 168356 cttctccatccatctatcca 168337

>gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome 5, complete sequence
          Length = 180919

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     cttctccatccatctatcca 26
             ||||||||||||||||||||
Sbjct: 35261 cttctccatccatctatcca 35242

>gb|AF143206.1| IncW plasmid pSa ArdC antirestriction protein (ardC) gene, complete
           cds
          Length = 1800

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 tcgccaagctaaagaacttg 307
           ||||||||||||||||||||
Sbjct: 965 tcgccaagctaaagaacttg 984

>emb|CR651945.2|CNS0F20F Tetraodon nigroviridis full-length cDNA
          Length = 1588

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  gctccattgtttcagcaacc 146
            ||||||||||||||||||||
Sbjct: 1235 gctccattgtttcagcaacc 1254

>emb|CR638524.2|CNS0ERNM Tetraodon nigroviridis full-length cDNA
          Length = 1604

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  gctccattgtttcagcaacc 146
            ||||||||||||||||||||
Sbjct: 1240 gctccattgtttcagcaacc 1259

>emb|BX293991.12| Zebrafish DNA sequence from clone CH211-261I24 in linkage group 11,
            complete sequence
          Length = 198825

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 2    ttctgcttctccatccatctatcc 25
            |||||| |||||||||||||||||
Sbjct: 5299 ttctgcctctccatccatctatcc 5276

>gb|AC008008.2| Homo sapiens Xp22 PAC RPCI6-102 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 167257

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    gagcaaagataaatacttgt 195
              ||||||||||||||||||||
Sbjct: 126771 gagcaaagataaatacttgt 126790

>gb|DQ406744.1| Volvox carteri f. nagariensis Met1 (met1) gene, complete cds
          Length = 29854

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    cacgctgcttctgcttctcc 44
             ||||||||||||||||||||
Sbjct: 18942 cacgctgcttctgcttctcc 18923

>gb|AC008645.5| Homo sapiens chromosome 5 clone CTB-181L5, complete sequence
          Length = 104390

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   tccagccagagatgactgga 214
             ||||||||||||||||||||
Sbjct: 36989 tccagccagagatgactgga 37008

>gb|AC016598.5|AC016598 Homo sapiens chromosome 5 clone CTD-2050E21, complete sequence
          Length = 159866

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tccagccagagatgactgga 214
             ||||||||||||||||||||
Sbjct: 84425 tccagccagagatgactgga 84406

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      gcatgctgctgctccattgt 136
                ||||||||||||||||||||
Sbjct: 25091329 gcatgctgctgctccattgt 25091348

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      ctgcatgctgctgctccatt 134
                ||||||||||||||||||||
Sbjct: 27700413 ctgcatgctgctgctccatt 27700394

>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121563

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   gcatgctgctgctccattgt 136
             ||||||||||||||||||||
Sbjct: 40150 gcatgctgctgctccattgt 40131

>dbj|AB182370.1| Escherichia coli plasmid R388 DNA, 13.46 kb SspI-BamHI fragment
          Length = 13459

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  tcgccaagctaaagaacttg 307
            ||||||||||||||||||||
Sbjct: 7184 tcgccaagctaaagaacttg 7165

>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   tgctgctgctccattgtttc 139
             ||||||||||||||||||||
Sbjct: 50991 tgctgctgctccattgtttc 51010

>emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 in linkage group 16,
             complete sequence
          Length = 166820

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     tctgcttctccatccatctatcca 26
             ||||| ||||||||||||||||||
Sbjct: 88283 tctgcctctccatccatctatcca 88260

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      gcatgctgctgctccattgt 136
                ||||||||||||||||||||
Sbjct: 25019531 gcatgctgctgctccattgt 25019550

>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146686

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   gcatgctgctgctccattgt 136
             ||||||||||||||||||||
Sbjct: 15842 gcatgctgctgctccattgt 15823

>emb|AL840624.14| Mouse DNA sequence from clone RP23-183D3 on chromosome X, complete
             sequence
          Length = 124795

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ttctccatccatctatccac 27
             ||||||||||||||||||||
Sbjct: 30553 ttctccatccatctatccac 30572

>tpd|BR000038.1| TPA: TPA_inf: Escherichia coli plasmid R388 DNA, complete sequence
          Length = 33913

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   tcgccaagctaaagaacttg 307
             ||||||||||||||||||||
Sbjct: 23260 tcgccaagctaaagaacttg 23241

>emb|AL450395.7| Mouse DNA sequence from clone RP23-145O4 on chromosome X, complete
             sequence
          Length = 198602

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   gggtaagctggccaccctga 275
             ||||||||||||||||||||
Sbjct: 27726 gggtaagctggccaccctga 27745

>emb|AJ301639.1|PYO301639 Plasmodium yoelii pid gene for plasmodium invasion determinant,(ORF1
            and ORF3 DNA)
          Length = 2103

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 288  tcgccaagctaaagaacttg 307
            ||||||||||||||||||||
Sbjct: 2083 tcgccaagctaaagaacttg 2102


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,762,186
Number of Sequences: 3902068
Number of extensions: 3762186
Number of successful extensions: 111749
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111599
Number of HSP's gapped (non-prelim): 150
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)