ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF064562.1|AF064562 Hordeum vulgare cultivar Bomi starch bran... 468 e-129
2emb|Y11282.1|TASBA2 T.aestivum mRNA for starch branching enzyme II 367 2e-98
3gb|AF286319.1| Triticum aestivum starch branching enzyme 2 (Sbe2... 367 2e-98
4gb|BT008928.1| Triticum aestivum clone wde1f.pk002.g8:fis, full ... 333 2e-88
5gb|U66376.1|TAU66376 Triticum aestivum 1,4-alpha-D-glucan 6-alph... 276 4e-71
6gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme... 210 2e-51
7gb|AF338432.1|AF338432 Triticum aestivum starch branching enzyme... 133 4e-28
8dbj|AB023498.1| Oryza sativa mRNA for starch branching enzyme rb... 92 1e-15
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
10gb|AY357072.1| Triticum aestivum cultivar Yumai-18 starch branch... 66 8e-08
11gb|AY109521.1| Zea mays CL1245_1 mRNA sequence 60 5e-06
12gb|U65948.1|ZMU65948 Zea mays starch branching enzyme IIa (Sbe2a... 60 5e-06
13gb|AF228486.1|AF228486 Zea mays starch branching enzyme 2a gene,... 48 0.019
14ref|XM_477110.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
15emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 44 0.29
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
17dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
18dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
19ref|XM_849137.1| PREDICTED: Canis familiaris similar to Adapter-... 42 1.1
20gb|AF086815.2|AF086815 Acidovorax avenae subsp. citrulli s-triaz... 42 1.1
21gb|AF342826.1|AF342826 Enterobacter cloacae plasmid pPDL12 s-tri... 42 1.1
22gb|BT011118.1| Drosophila melanogaster LD13710 full insert cDNA 40 4.5
23ref|NM_165320.1| Drosophila melanogaster CG10722-RB, transcript ... 40 4.5
24ref|NM_136181.1| Drosophila melanogaster CG10722-RA, transcript ... 40 4.5
25emb|AJ616913.1| Sordaria macrospora pro40 gene for putative sign... 40 4.5
26gb|AC093044.1| Drosophila melanogaster, chromosome 2L, region 38... 40 4.5
27dbj|AB062136.1| Streptomyces halstedii PDK1 gene for phospholipa... 40 4.5
28dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.5
29gb|AC141209.11| Mus musculus chromosome 3, clone RP23-199M5, com... 40 4.5
30gb|AF130408.1|AF130408 Streptomyces viridosporus strain T7A cell... 40 4.5
31gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74... 40 4.5
32gb|AC078897.20| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 4.5
33gb|AY553215.2| Nicotiana tabacum hexokinase 2 (Hxk2) mRNA, compl... 40 4.5
34gb|AC004364.1|AC004364 Drosophila melanogaster DNA sequence (P1 ... 40 4.5 
>gb|AF064562.1|AF064562 Hordeum vulgare cultivar Bomi starch branching enzyme IIa (sbeIIa)
           gene, nuclear gene encoding plastid protein, partial cds
          Length = 1852

 Score =  468 bits (236), Expect = e-129
 Identities = 258/265 (97%), Gaps = 1/265 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcgcttctcaattaatatctcccatcactcccctcactcggtcggcctcgggttccgcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atcgcttctcaattaatatctcccatcactcccctcactcggtcggcctcgggttccgcg 286

                                                                       
Query: 61  ctgctgcacttcggccggcgtgttgagtgagatctgggcgaccgactcgctcgctcgctg 120
           |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 287 ctgctgcatttcggccggcgtgttgagtgagatctgggcgaccgactcgctcgc-ctctg 345

                                                                       
Query: 121 cgcgggagatggcgacgttcgcggtgtccggcgcgacccttggtgtggcgcgggccgccg 180
           |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cgcgggadntggcgacgttcgcggtgtccggcgcgacccttggtgtggcgcgggccgccg 405

                                                                       
Query: 181 gcggagcgctgccgcgatccggctcggagcggaggggcgggctggacttgccgtcgctgc 240
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gcggaaggctgccgcgatccggctcggagcggaggggcgggctggacttgccgtcgctgc 465

                                    
Query: 241 tcctcaggaagaaggactcctctcg 265
           |||||||||||||||||||||||||
Sbjct: 466 tcctcaggaagaaggactcctctcg 490



 Score =  125 bits (63), Expect = 1e-25
 Identities = 77/79 (97%), Gaps = 2/79 (2%)
 Strand = Plus / Plus

                                                                       
Query: 265 gcgccgtcctgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcg 324
           |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 818 gcgccgtcctga-ctgcgcggccgctccagggaaggtcctggtgc-tgacggtgagagcg 875

                              
Query: 325 acgacttggccgccactcc 343
           |||||||||||||||||||
Sbjct: 876 acgacttggccgccactcc 894
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>emb|Y11282.1|TASBA2 T.aestivum mRNA for starch branching enzyme II
          Length = 2970

 Score =  367 bits (185), Expect = 2e-98
 Identities = 272/300 (90%), Gaps = 17/300 (5%)
 Strand = Plus / Plus

                                                                       
Query: 48  ctcgggttccgcgctgctgcacttcggccggcgtgttgagtgagatctgggc----gacc 103
           |||||||||||||||||   | ||||||||||| ||||||||||||||||||    ||||
Sbjct: 70  ctcgggttccgcgctgc---atttcggccggcgggttgagtgagatctgggccactgacc 126

                                                                       
Query: 104 gactcgctcgctcgctgcgcgggagatggcgacgttcgcggtgtccggcgcgacccttgg 163
           ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 127 gactcactcgctcgctgcgcggg-gatggcgacgttcgcggtgtccggcgcgaccctcgg 185

                                                                       
Query: 164 tgtggcgcgggccgccgg---------cggagcgctgccgcgatccggctcggagcggag 214
           |||||||||| |||||||         ||||  |||||||||||||||||||||||||||
Sbjct: 186 tgtggcgcggcccgccggcgccggcggcggactgctgccgcgatccggctcggagcggag 245

                                                                       
Query: 215 gggcgggctggacttgccgtcgctgctcctcaggaagaaggactcctctcgcgccgtcct 274
           ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gggcggggtggacctgccgtcgctgctcctcaggaagaaggactcctctcgcgccgtcct 305

                                                                       
Query: 275 gagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcgacgacttggc 334
           |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gagccgcgcggcctctccagggaaggtcctggtgcctgacggtgagagcgacgacttggc 365



 Score = 46.1 bits (23), Expect = 0.074
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  atcgcttctcaattaatatctcc 23
          |||||||||||||||||||||||
Sbjct: 43 atcgcttctcaattaatatctcc 65
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>gb|AF286319.1| Triticum aestivum starch branching enzyme 2 (Sbe2) mRNA, complete
           cds
          Length = 2970

 Score =  367 bits (185), Expect = 2e-98
 Identities = 272/300 (90%), Gaps = 17/300 (5%)
 Strand = Plus / Plus

                                                                       
Query: 48  ctcgggttccgcgctgctgcacttcggccggcgtgttgagtgagatctgggc----gacc 103
           |||||||||||||||||   | ||||||||||| ||||||||||||||||||    ||||
Sbjct: 68  ctcgggttccgcgctgc---atttcggccggcgggttgagtgagatctgggccactgacc 124

                                                                       
Query: 104 gactcgctcgctcgctgcgcgggagatggcgacgttcgcggtgtccggcgcgacccttgg 163
           ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 125 gactcactcgctcgctgcgcggg-gatggcgacgttcgcggtgtccggcgcgaccctcgg 183

                                                                       
Query: 164 tgtggcgcgggccgccgg---------cggagcgctgccgcgatccggctcggagcggag 214
           |||||||||| |||||||         ||||  |||||||||||||||||||||||||||
Sbjct: 184 tgtggcgcggcccgccggcgccggcggcggactgctgccgcgatccggctcggagcggag 243

                                                                       
Query: 215 gggcgggctggacttgccgtcgctgctcctcaggaagaaggactcctctcgcgccgtcct 274
           ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gggcggggtggacctgccgtcgctgctcctcaggaagaaggactcctctcgcgccgtcct 303

                                                                       
Query: 275 gagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcgacgacttggc 334
           |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gagccgcgcggcctctccagggaaggtcctggtgcctgacggtgagagcgacgacttggc 363



 Score = 46.1 bits (23), Expect = 0.074
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  atcgcttctcaattaatatctcc 23
          |||||||||||||||||||||||
Sbjct: 41 atcgcttctcaattaatatctcc 63
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>gb|BT008928.1| Triticum aestivum clone wde1f.pk002.g8:fis, full insert mRNA
           sequence
          Length = 2549

 Score =  333 bits (168), Expect = 2e-88
 Identities = 240/263 (91%), Gaps = 7/263 (2%)
 Strand = Plus / Plus

                                                                       
Query: 87  gtgagatctgggcgaccgactcgctcgctcgctgcgcgggagatggcgacgttcgcggtg 146
           ||||||||||||| || |||   ||| ||||||||||||| |||||||||||||||||||
Sbjct: 1   gtgagatctgggccactgaccgactcactcgctgcgcggg-gatggcgacgttcgcggtg 59

                                                                       
Query: 147 tccggcgcgacccttggtgtggcgcgggccgcc------ggcggagcgctgccgcgatcc 200
           |||||||||||||| |||||||||||| |||||      ||||| |  |||| |||||||
Sbjct: 60  tccggcgcgaccctcggtgtggcgcggcccgccagcgccggcggcggactgctgcgatcc 119

                                                                       
Query: 201 ggctcggagcggaggggcgggctggacttgccgtcgctgctcctcaggaagaaggactcc 260
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ggctcggagcggaggggcggggtggacttgccgtcgctgctcctcaggaagaaggactcc 179

                                                                       
Query: 261 tctcgcgccgtcctgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgag 320
           |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 180 tctcgcgccgtcctgagccgcgcggcctctccagggaaggtcctggtgcctgacggtgag 239

                                  
Query: 321 agcgacgacttggccgccactcc 343
           |||||||||||||| ||||||||
Sbjct: 240 agcgacgacttggcggccactcc 262
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>gb|U66376.1|TAU66376 Triticum aestivum 1,4-alpha-D-glucan
           6-alpha-D-(1,4-alpha-D-glucanotransferase mRNA, complete
           cds
          Length = 2853

 Score =  276 bits (139), Expect = 4e-71
 Identities = 224/249 (89%), Gaps = 5/249 (2%)
 Strand = Plus / Plus

                                                                       
Query: 87  gtgagatctgggcgaccgactcgctcgctcgctgcgcgggagatggcgacgtt-cgcggt 145
           |||||||||||||||| | ||  |||  || || |||||| |||||||||||| ||||||
Sbjct: 1   gtgagatctgggcgactggctgactcaatcactacgcggg-gatggcgacgtttcgcggt 59

                                                                       
Query: 146 gtccggcgcgacccttggtgtggcgcgggccgccggcggagcgctgccgcgatccggctc 205
           |||||||||||| || |||||||||||||||| || |||||   || ||||  |||||||
Sbjct: 60  gtccggcgcgactctcggtgtggcgcgggccggcgtcggag---tggcgcgggccggctc 116

                                                                       
Query: 206 ggagcggaggggcgggctggacttgccgtcgctgctcctcaggaagaaggactcctctcg 265
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ggagcggaggggcggggcggacttgccgtcgctgctcctcaggaagaaggactcctctcg 176

                                                                       
Query: 266 cgccgtcctgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcga 325
           ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 177 cgccgtcctgagccgcgcggcctctccagggaaggtcctggtgcctgacggcgagagcga 236

                    
Query: 326 cgacttggc 334
           |||||||||
Sbjct: 237 cgacttggc 245
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>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds
          Length = 11475

 Score =  210 bits (106), Expect = 2e-51
 Identities = 192/218 (88%), Gaps = 7/218 (3%)
 Strand = Plus / Plus

                                                                        
Query: 48   ctcgggttccgcgctgctgcacttcggccggcgtgttgagtgagatctgggcgaccgact 107
            |||||||||||||||||   | ||||||||||| ||||||||||||||||||||| | ||
Sbjct: 1127 ctcgggttccgcgctgc---atttcggccggcgggttgagtgagatctgggcgactggct 1183

                                                                        
Query: 108  cgctcgctcgctgcgcgggagatggcgacgttcgcggtgtccggcgcgacccttggtgtg 167
              |||  || || |||||| |||||||||||||||||||||||||||||| || ||||||
Sbjct: 1184 gactcaatcactacgcggg-gatggcgacgttcgcggtgtccggcgcgactctcggtgtg 1242

                                                                        
Query: 168  gcgcgggccgccggcggagcgctgccgcgatccggctcggagcggaggggcgggctggac 227
            |||||||||| || |||||   || ||||  |||||||||||||||||||||||  ||||
Sbjct: 1243 gcgcgggccggcgtcggag---tggcgcgggccggctcggagcggaggggcggggcggac 1299

                                                  
Query: 228  ttgccgtcgctgctcctcaggaagaaggactcctctcg 265
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 ttgccgtcgctgctcctcaggaagaaggactcctctcg 1337



 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                        
Query: 265  gcgccgtcctgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcg 324
            |||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 1664 gcgccgtcctgagccgcgcggcctctccagggaaggtcctggtgcctgacggcgagagcg 1723

                      
Query: 325  acgacttggc 334
            ||||||||||
Sbjct: 1724 acgacttggc 1733



 Score = 46.1 bits (23), Expect = 0.074
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1    atcgcttctcaattaatatctcc 23
            |||||||||||||||||||||||
Sbjct: 1100 atcgcttctcaattaatatctcc 1122
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>gb|AF338432.1|AF338432 Triticum aestivum starch branching enzyme IIa variant mRNA,
           complete cds
          Length = 2726

 Score =  133 bits (67), Expect = 4e-28
 Identities = 113/126 (89%), Gaps = 8/126 (6%)
 Strand = Plus / Plus

                                                                       
Query: 63  gctgcacttcggccggcgtgttgagtgagatctgggc----gaccgactcgctcgctcgc 118
           |||||| ||||||||||| ||||||||||||||||||    ||||||||| |||||||||
Sbjct: 57  gctgcatttcggccggcgggttgagtgagatctgggccactgaccgactcactcgctcgc 116

                                                                       
Query: 119 tgcgcgggagatggcgacgttcgcggtgtccggcgcgacccttggtgtggcgcgggccgc 178
           |||| ||   |||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 117 tgcgggg---atggcgacgttcgcggtgtccggcgcgaccctcggtgtggcgc-ggccgc 172

                 
Query: 179 cggcgg 184
           ||||||
Sbjct: 173 cggcgg 178



 Score = 46.1 bits (23), Expect = 0.074
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  atcgcttctcaattaatatctcc 23
          |||||||||||||||||||||||
Sbjct: 19 atcgcttctcaattaatatctcc 41
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>dbj|AB023498.1| Oryza sativa mRNA for starch branching enzyme rbe4, complete cds
          Length = 3015

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 102/120 (85%), Gaps = 3/120 (2%)
 Strand = Plus / Plus

                                                                       
Query: 216 ggcgggctggacttgccgtcgctgctcctcaggaagaaggactcct---ctcgcgccgtc 272
           |||||| |||||||||||||| ||||| |||||| |||||||||||   | || | ||| 
Sbjct: 219 ggcggggtggacttgccgtcggtgctcttcaggaggaaggactccttctcacgtggcgtt 278

                                                                       
Query: 273 ctgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcgacgacttg 332
            ||||||||||||  ||||| |||||||| |||||||||| ||||| |||||||||||||
Sbjct: 279 gtgagctgcgcgggtgctcctgggaaggtgctggtgcctggcggtgggagcgacgacttg 338



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 123 cgggagatggcgacgttcgcggtgtccggcgcga 156
           |||| ||||||| |||||||||||||||||||||
Sbjct: 123 cgggggatggcgtcgttcgcggtgtccggcgcga 156
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 274      tgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcgacgacttg 332
                ||||||||||||  ||||| |||||||| |||||||||| ||||| |||||||||||||
Sbjct: 20251877 tgagctgcgcgggtgctcctgggaaggtgctggtgcctggcggtgggagcgacgacttg 20251819



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 216      ggcgggctggacttgccgtcgctgctcctcaggaagaaggactcct 261
                |||||| |||||||||||||| ||||| |||||| |||||||||||
Sbjct: 20252427 ggcggggtggacttgccgtcggtgctcttcaggaggaaggactcct 20252382



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 123      cgggagatggcgacgttcgcggtgtccggcgcga 156
                |||| ||||||| |||||||||||||||||||||
Sbjct: 20252523 cgggggatggcgtcgttcgcggtgtccggcgcga 20252490
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>gb|AY357072.1| Triticum aestivum cultivar Yumai-18 starch branching enzyme IIa
            (SbeIIa) gene, promoter region and partial cds
          Length = 3094

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 50/55 (90%), Gaps = 3/55 (5%)
 Strand = Plus / Plus

                                                                   
Query: 48   ctcgggttccgcgctgctgcacttcggccggcgtgttgagtgagatctgggcgac 102
            |||||||||||||||||   | ||||||||||| |||||||||||||||||||||
Sbjct: 3015 ctcgggttccgcgctgc---atttcggccggcgggttgagtgagatctgggcgac 3066



 Score = 46.1 bits (23), Expect = 0.074
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1    atcgcttctcaattaatatctcc 23
            |||||||||||||||||||||||
Sbjct: 2988 atcgcttctcaattaatatctcc 3010
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>gb|AY109521.1| Zea mays CL1245_1 mRNA sequence
          Length = 2766

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 77/92 (83%), Gaps = 3/92 (3%)
 Strand = Plus / Plus

                                                                       
Query: 224 ggacttgccgtcgctgctcctcaggaagaaggac---tcctctcgcgccgtcctgagctg 280
           ||||||||||||| ||||| |||||| |||||||   | ||||||| |||| ||||||||
Sbjct: 1   ggacttgccgtcggtgctcttcaggaggaaggacgctttctctcgcaccgttctgagctg 60

                                           
Query: 281 cgcggccgctccagggaaggtcctggtgcctg 312
           ||| |  ||||| || ||||| ||||||||||
Sbjct: 61  cgctggtgctcctggaaaggtactggtgcctg 92
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>gb|U65948.1|ZMU65948 Zea mays starch branching enzyme IIa (Sbe2a) mRNA, partial cds
          Length = 2795

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 77/92 (83%), Gaps = 3/92 (3%)
 Strand = Plus / Plus

                                                                       
Query: 224 ggacttgccgtcgctgctcctcaggaagaaggac---tcctctcgcgccgtcctgagctg 280
           ||||||||||||| ||||| |||||| |||||||   | ||||||| |||| ||||||||
Sbjct: 1   ggacttgccgtcggtgctcttcaggaggaaggacgctttctctcgcaccgttctgagctg 60

                                           
Query: 281 cgcggccgctccagggaaggtcctggtgcctg 312
           ||| |  ||||| || ||||| ||||||||||
Sbjct: 61  cgctggtgctcctggaaaggtactggtgcctg 92
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>gb|AF228486.1|AF228486 Zea mays starch branching enzyme 2a gene, partial cds
          Length = 4668

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                
Query: 206  ggagcggaggggcgggctggacttgccgtcgctgctcctcaggaagaaggac 257
            |||||||||| | | | |||||||||||||| ||||| |||||| |||||||
Sbjct: 3924 ggagcggaggagtgcggtggacttgccgtcggtgctcttcaggaggaaggac 3975



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 128  gatggcgacgttcgcggtgtccggcgcga 156
            ||||||| ||||||| |||||||||||||
Sbjct: 3852 gatggcgtcgttcgctgtgtccggcgcga 3880
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>ref|XM_477110.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 516

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 29  ctcccctcactcggtcggcctc 50
           ||||||||||||||||||||||
Sbjct: 373 ctcccctcactcggtcggcctc 352
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 174    gccgccggcggagcgctgccgc 195
              ||||||||||||||||||||||
Sbjct: 188495 gccgccggcggagcgctgccgc 188516
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 29      ctcccctcactcggtcggcctc 50
               ||||||||||||||||||||||
Sbjct: 5955527 ctcccctcactcggtcggcctc 5955548
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>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0008C11
          Length = 157205

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 29    ctcccctcactcggtcggcctc 50
             ||||||||||||||||||||||
Sbjct: 10697 ctcccctcactcggtcggcctc 10718
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>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 29    ctcccctcactcggtcggcctc 50
             ||||||||||||||||||||||
Sbjct: 97975 ctcccctcactcggtcggcctc 97996
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>ref|XM_849137.1| PREDICTED: Canis familiaris similar to Adapter-related protein
           complex 1 sigma 1B subunit (Sigma-adaptin 1B) (Adaptor
           protein complex AP-1 sigma-1B subunit) (Golgi adaptor
           HA1/AP1 adaptin sigma-1B subunit) (Clathrin assembly
           protein complex 1 sigma-1B small chain) (Sigma 1B s...
           (LOC611468), mRNA
          Length = 1520

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 207 gagcggaggggcgggctggac 227
           |||||||||||||||||||||
Sbjct: 420 gagcggaggggcgggctggac 400
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>gb|AF086815.2|AF086815 Acidovorax avenae subsp. citrulli s-triazine ring-cleavage gene region
          Length = 24123

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    ccggcgtgttgagtgagatct 95
             |||||||||||||||||||||
Sbjct: 14980 ccggcgtgttgagtgagatct 15000
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>gb|AF342826.1|AF342826 Enterobacter cloacae plasmid pPDL12 s-triazine ring-cleavage gene
             region
          Length = 22210

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    ccggcgtgttgagtgagatct 95
             |||||||||||||||||||||
Sbjct: 16784 ccggcgtgttgagtgagatct 16804
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>gb|BT011118.1| Drosophila melanogaster LD13710 full insert cDNA
          Length = 1934

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 tcgctgctcctcaggaagaa 253
           ||||||||||||||||||||
Sbjct: 870 tcgctgctcctcaggaagaa 889
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>ref|NM_165320.1| Drosophila melanogaster CG10722-RB, transcript variant B (CG10722),
            mRNA
          Length = 2073

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  tcgctgctcctcaggaagaa 253
            ||||||||||||||||||||
Sbjct: 1028 tcgctgctcctcaggaagaa 1047
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>ref|NM_136181.1| Drosophila melanogaster CG10722-RA, transcript variant A (CG10722),
            mRNA
          Length = 2142

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  tcgctgctcctcaggaagaa 253
            ||||||||||||||||||||
Sbjct: 1097 tcgctgctcctcaggaagaa 1116
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>emb|AJ616913.1| Sordaria macrospora pro40 gene for putative signalling cascade
            component, exons 1-2
          Length = 6002

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  ttgccgtcgctgctcctcag 247
            ||||||||||||||||||||
Sbjct: 1894 ttgccgtcgctgctcctcag 1913
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>gb|AC093044.1| Drosophila melanogaster, chromosome 2L, region 38A-38B, BAC clone
              BACR10H13, complete sequence
          Length = 165585

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    tcgctgctcctcaggaagaa 253
              ||||||||||||||||||||
Sbjct: 121558 tcgctgctcctcaggaagaa 121577
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>dbj|AB062136.1| Streptomyces halstedii PDK1 gene for phospholipase D, complete cds
          Length = 1726

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 270  gtcctgagctgcgcggccgc 289
            ||||||||||||||||||||
Sbjct: 1647 gtcctgagctgcgcggccgc 1628
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 123     cgggagatggcgacgttcgcggtg 146
               |||| |||||||||||||||||||
Sbjct: 2727097 cgggcgatggcgacgttcgcggtg 2727120
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>gb|AC141209.11| Mus musculus chromosome 3, clone RP23-199M5, complete sequence
          Length = 192274

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    caggaagaaggactcctctc 264
              ||||||||||||||||||||
Sbjct: 179141 caggaagaaggactcctctc 179122
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>gb|AF130408.1|AF130408 Streptomyces viridosporus strain T7A cellulase (celS1) mRNA,
           complete cds
          Length = 1311

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 172 gggccgccggcggagcgctgccgc 195
           ||||||||||||||||||| ||||
Sbjct: 130 gggccgccggcggagcgcttccgc 107
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>gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74 of 83 of the complete
             sequence
          Length = 157875

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tcgctgctcctcaggaagaa 253
             ||||||||||||||||||||
Sbjct: 96889 tcgctgctcctcaggaagaa 96908
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>gb|AC078897.20| Mus musculus strain C57BL/6J chromosome 3 clone rp23-105k2, complete
              sequence
          Length = 200088

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    caggaagaaggactcctctc 264
              ||||||||||||||||||||
Sbjct: 188231 caggaagaaggactcctctc 188250
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>gb|AY553215.2| Nicotiana tabacum hexokinase 2 (Hxk2) mRNA, complete cds
          Length = 2300

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 gcgggctggacttgccgtcg 236
           ||||||||||||||||||||
Sbjct: 526 gcgggctggacttgccgtcg 545
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>gb|AC004364.1|AC004364 Drosophila melanogaster DNA sequence (P1 DS00863 (D58)), complete
             sequence
          Length = 78857

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tcgctgctcctcaggaagaa 253
             ||||||||||||||||||||
Sbjct: 52591 tcgctgctcctcaggaagaa 52610


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,968,002
Number of Sequences: 3902068
Number of extensions: 1968002
Number of successful extensions: 44270
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44022
Number of HSP's gapped (non-prelim): 229
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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