ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl43a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
2dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
3dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
4ref|NM_125486.2| Arabidopsis thaliana ATP binding / microtubule ... 78 3e-11
5gb|BC077205.1| Xenopus laevis hypothetical protein LOC445847, mR... 64 4e-07
6gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete se... 64 4e-07
7dbj|AB008269.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 62 2e-06
8gb|AC146870.3| Xenopus tropicalis clone CH216-139C6, complete se... 44 0.36
9gb|AC008505.6| Homo sapiens chromosome 5 clone CTC-445B21, compl... 44 0.36
10ref|NM_114884.2| Arabidopsis thaliana KICP-02; ATP binding / mic... 42 1.4
11gb|AC101816.17| Mus musculus chromosome 1, clone RP24-353D23, co... 42 1.4
12gb|AC103968.11| Homo sapiens chromosome 15, clone RP11-719C20, c... 42 1.4
13emb|Z34527.1|LESSRPSPR L.esculentum (UC82-B) mRNA for 54-kD sign... 42 1.4
14emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BA... 42 1.4
15gb|AC132123.3| Mus musculus BAC clone RP24-79F8 from 1, complete... 42 1.4
16dbj|AB061676.1| Arabidopsis thaliana kicp-02 mRNA for kinesin-re... 42 1.4
17ref|XM_517925.1| PREDICTED: Pan troglodytes kinesin family membe... 40 5.6
18gb|AC156548.13| Mus musculus chromosome 5, clone RP23-412C8, com... 40 5.6
19gb|AC004237.1| Homo sapiens chromosome 5, P1 clone 565a12 (LBNL ... 40 5.6
20gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosom... 40 5.6
21gb|BC045542.1| Homo sapiens kinesin family member 3A, mRNA (cDNA... 40 5.6
22ref|NM_007054.5| Homo sapiens kinesin family member 3A (KIF3A), ... 40 5.6
23gb|AC002433.2| Homo sapiens BAC clone CTA-317M2 from 7, complete... 40 5.6
24emb|CR524826.13| Zebrafish DNA sequence from clone CH211-227A6 i... 40 5.6
25gb|AC132222.3| Mus musculus BAC clone RP24-549C2 from chromosome... 40 5.6
26gb|BC032599.1| Homo sapiens kinesin family member 3A, mRNA (cDNA... 40 5.6
27gb|BC020890.1| Homo sapiens kinesin family member 3A, mRNA (cDNA... 40 5.6
28gb|AC163219.3| Mus musculus chromosome 5, clone RP24-155K17, com... 40 5.6
29gb|AC137824.25| Medicago truncatula clone mth2-10l10, complete s... 40 5.6
30emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chr... 40 5.6
31emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome 40 5.6
32emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4,... 40 5.6
33emb|CR861275.1| Pongo pygmaeus mRNA; cDNA DKFZp459M153 (from clo... 40 5.6
34emb|CR621012.1| full-length cDNA clone CS0DJ015YJ21 of T cells (... 40 5.6
35emb|BX890611.8| Zebrafish DNA sequence from clone DKEYP-86H10, c... 40 5.6
36gb|AC157216.2| Pan troglodytes BAC clone CH251-66E23 from chromo... 40 5.6
37dbj|AB169362.1| Macaca fascicularis testis cDNA, clone: QtsA-192... 40 5.6
38dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
39gb|AC008901.5|AC008901 Homo sapiens chromosome 5 clone CTD-2245E... 40 5.6
40gb|AC073632.4| Homo sapiens BAC clone RP11-202H24 from 2, comple... 40 5.6
41gb|BC039592.1| Homo sapiens, clone IMAGE:5403936, mRNA, partial cds 40 5.6
42gb|AC171917.14| Mus musculus chromosome 8, clone RP23-390K13, co... 40 5.6
43gb|AC171678.8| Mus musculus chromosome 8, clone RP24-104E12, com... 40 5.6
44gb|AF041853.1|AF041853 Homo sapiens kinesin family member protei... 40 5.6
45emb|AM177178.1| Homo sapiens mRNA for kinesin-like protein KIF3A... 40 5.6
46gb|AC161596.2| Mus musculus BAC clone RP23-477K6 from chromosome... 40 5.6
47dbj|AB209780.1| Homo sapiens mRNA for Kinesin-like protein KIF3A... 40 5.6
48emb|AL772224.2| Mouse DNA sequence from clone RP23-131N18 on chr... 40 5.6
49emb|AL133401.16| Mouse DNA sequence from clone RP21-72L18 on chr... 40 5.6

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  117 bits (59), Expect = 3e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                            
Query: 2        gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61
                ||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 31145319 gtcctgccgattcaaatgcagaagaaaccataaacacactcaagtatgccaatcgtgcac 31145260

                                   
Query: 62       ggaatattcaaaataaagc 80
                |||| ||||||||||||||
Sbjct: 31145259 ggaacattcaaaataaagc 31145241



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                            
Query: 193      tttcagttgctgcaacaaaaagtctctctacttgagttaaaaatttcagaactttactgt 252
                |||||| |||||||||||||||| |||||||||||| ||||||  ||||| ||| ||  |
Sbjct: 31144976 tttcagctgctgcaacaaaaagtgtctctacttgagctaaaaaactcagagcttaaccat 31144917

                                                                            
Query: 253      gagctcaaggaaagggaaatgtcttgtgaacagttagcacagcgtgcagttgctgcccag 312
                ||||| |||||||||||| |||| | ||||||||| |||||  ||||| |||| ||||||
Sbjct: 31144916 gagcttaaggaaagggaattgtcatatgaacagttggcacaaagtgcacttgccgcccag 31144857



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                            
Query: 94       gacccagttacagcagagatgcaaaaattgaggagtcaagtagagcagctccagagtgaa 153
                ||||||||||||||||||||||||||||| ||||||||  | |||||| | |||| ||| 
Sbjct: 31145149 gacccagttacagcagagatgcaaaaattaaggagtcagttggagcagttgcagactgag 31145090

                                                       
Query: 154      cttctgttttcccgcagtgggggtgcatcactagaagaa 192
                || ||||| |||||||||||| ||||  | |||||||||
Sbjct: 31145089 ctcctgttctcccgcagtgggagtgctgctctagaagaa 31145051



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>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1734_E02
          Length = 168566

 Score =  117 bits (59), Expect = 3e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                         
Query: 2     gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61
             ||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 25162 gtcctgccgattcaaatgcagaagaaaccataaacacactcaagtatgccaatcgtgcac 25103

                                
Query: 62    ggaatattcaaaataaagc 80
             |||| ||||||||||||||
Sbjct: 25102 ggaacattcaaaataaagc 25084



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                         
Query: 193   tttcagttgctgcaacaaaaagtctctctacttgagttaaaaatttcagaactttactgt 252
             |||||| |||||||||||||||| |||||||||||| ||||||  ||||| ||| ||  |
Sbjct: 24819 tttcagctgctgcaacaaaaagtgtctctacttgagctaaaaaactcagagcttaaccat 24760

                                                                         
Query: 253   gagctcaaggaaagggaaatgtcttgtgaacagttagcacagcgtgcagttgctgcccag 312
             ||||| |||||||||||| |||| | ||||||||| |||||  ||||| |||| ||||||
Sbjct: 24759 gagcttaaggaaagggaattgtcatatgaacagttggcacaaagtgcacttgccgcccag 24700



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                         
Query: 94    gacccagttacagcagagatgcaaaaattgaggagtcaagtagagcagctccagagtgaa 153
             ||||||||||||||||||||||||||||| ||||||||  | |||||| | |||| ||| 
Sbjct: 24992 gacccagttacagcagagatgcaaaaattaaggagtcagttggagcagttgcagactgag 24933

                                                    
Query: 154   cttctgttttcccgcagtgggggtgcatcactagaagaa 192
             || ||||| |||||||||||| ||||  | |||||||||
Sbjct: 24932 ctcctgttctcccgcagtgggagtgctgctctagaagaa 24894



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>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0585G03
          Length = 173649

 Score =  117 bits (59), Expect = 3e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                          
Query: 2      gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61
              ||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 134543 gtcctgccgattcaaatgcagaagaaaccataaacacactcaagtatgccaatcgtgcac 134484

                                 
Query: 62     ggaatattcaaaataaagc 80
              |||| ||||||||||||||
Sbjct: 134483 ggaacattcaaaataaagc 134465



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                          
Query: 193    tttcagttgctgcaacaaaaagtctctctacttgagttaaaaatttcagaactttactgt 252
              |||||| |||||||||||||||| |||||||||||| ||||||  ||||| ||| ||  |
Sbjct: 134200 tttcagctgctgcaacaaaaagtgtctctacttgagctaaaaaactcagagcttaaccat 134141

                                                                          
Query: 253    gagctcaaggaaagggaaatgtcttgtgaacagttagcacagcgtgcagttgctgcccag 312
              ||||| |||||||||||| |||| | ||||||||| |||||  ||||| |||| ||||||
Sbjct: 134140 gagcttaaggaaagggaattgtcatatgaacagttggcacaaagtgcacttgccgcccag 134081



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                          
Query: 94     gacccagttacagcagagatgcaaaaattgaggagtcaagtagagcagctccagagtgaa 153
              ||||||||||||||||||||||||||||| ||||||||  | |||||| | |||| ||| 
Sbjct: 134373 gacccagttacagcagagatgcaaaaattaaggagtcagttggagcagttgcagactgag 134314

                                                     
Query: 154    cttctgttttcccgcagtgggggtgcatcactagaagaa 192
              || ||||| |||||||||||| ||||  | |||||||||
Sbjct: 134313 ctcctgttctcccgcagtgggagtgctgctctagaagaa 134275



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>ref|NM_125486.2| Arabidopsis thaliana ATP binding / microtubule motor AT5G60930 mRNA,
            complete cds
          Length = 3885

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 84/99 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2    gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61
            |||| |||||| | ||||| ||||||||  ||||||| ||||| || || |||||||| |
Sbjct: 1013 gtcccgctgatacaaatgctgaggaaactttaaatacgctcaaatacgcaaatcgtgctc 1072

                                                   
Query: 62   ggaatattcaaaataaagcagtgatcaacagagacccag 100
            | ||||||||||| ||||||||||||||  |||||||||
Sbjct: 1073 gcaatattcaaaacaaagcagtgatcaatcgagacccag 1111



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>gb|BC077205.1| Xenopus laevis hypothetical protein LOC445847, mRNA (cDNA clone
            IMAGE:4404532), partial cds
          Length = 1853

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 24   ggaaaccataaatacactcaagtatgccaatcgtgcacggaatattcaaaataaag 79
            ||||||| |||| ||||| || ||||||||||| |||||||||||| |||||||||
Sbjct: 1204 ggaaaccttaaacacacttaaatatgccaatcgggcacggaatattaaaaataaag 1259



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>gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete sequence
          Length = 102937

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                          
Query: 2      gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61
              |||||||||||  |||||| ||||||||| |||| ||  | |||||||| ||||||||||
Sbjct: 102100 gtcctgctgatattaatgctgaggaaaccctaaacactttaaagtatgcaaatcgtgcac 102159

                              
Query: 62     ggaatattcaaaataa 77
              | ||||| ||||||||
Sbjct: 102160 gcaatatccaaaataa 102175



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>dbj|AB008269.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSL3
          Length = 61634

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                         
Query: 2     gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61
             |||| |||||| | ||||| ||||||||  ||||||| ||||| || || |||||||| |
Sbjct: 31007 gtcccgctgatacaaatgctgaggaaactttaaatacgctcaaatacgcaaatcgtgctc 30948

                                    
Query: 62    ggaatattcaaaataaagcagtg 84
             | ||||||||||| |||||||||
Sbjct: 30947 gcaatattcaaaacaaagcagtg 30925



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>gb|AC146870.3| Xenopus tropicalis clone CH216-139C6, complete sequence
          Length = 168665

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 170    gtgggggtgcatcactagaaga 191
              ||||||||||||||||||||||
Sbjct: 161117 gtgggggtgcatcactagaaga 161096



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>gb|AC008505.6| Homo sapiens chromosome 5 clone CTC-445B21, complete sequence
          Length = 161658

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 12    ttctaatgcagaggaaaccata 33
             ||||||||||||||||||||||
Sbjct: 66558 ttctaatgcagaggaaaccata 66537



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>ref|NM_114884.2| Arabidopsis thaliana KICP-02; ATP binding / microtubule motor
            AT3G50240 (KICP-02) mRNA, complete cds
          Length = 3537

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 40   ctcaagtatgccaatcgtgcacggaatat 68
            ||||||||||| |||||||| ||||||||
Sbjct: 1209 ctcaagtatgcaaatcgtgctcggaatat 1237



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>gb|AC101816.17| Mus musculus chromosome 1, clone RP24-353D23, complete sequence
          Length = 190313

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 257   tcaaggaaagggaaatgtcttgtga 281
             ||||||||||||||||| |||||||
Sbjct: 61286 tcaaggaaagggaaatggcttgtga 61310



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>gb|AC103968.11| Homo sapiens chromosome 15, clone RP11-719C20, complete sequence
          Length = 162470

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    aagaatttcagttgctgcaac 208
              |||||||||||||||||||||
Sbjct: 124143 aagaatttcagttgctgcaac 124163



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>emb|Z34527.1|LESSRPSPR L.esculentum (UC82-B) mRNA for 54-kD signal recognition particle
           (SRP) specific protein
          Length = 1861

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 cagttgctgcaacaaaaagtc 216
           |||||||||||||||||||||
Sbjct: 872 cagttgctgcaacaaaaagtc 892



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>emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BAC clone F11C1
          Length = 111122

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 40    ctcaagtatgccaatcgtgcacggaatat 68
             ||||||||||| |||||||| ||||||||
Sbjct: 27187 ctcaagtatgcaaatcgtgctcggaatat 27159



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>gb|AC132123.3| Mus musculus BAC clone RP24-79F8 from 1, complete sequence
          Length = 214923

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 257    tcaaggaaagggaaatgtcttgtga 281
              ||||||||||||||||| |||||||
Sbjct: 204963 tcaaggaaagggaaatggcttgtga 204987



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>dbj|AB061676.1| Arabidopsis thaliana kicp-02 mRNA for kinesin-related protein,
            complete cds
          Length = 3398

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 40   ctcaagtatgccaatcgtgcacggaatat 68
            ||||||||||| |||||||| ||||||||
Sbjct: 1216 ctcaagtatgcaaatcgtgctcggaatat 1244



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>ref|XM_517925.1| PREDICTED: Pan troglodytes kinesin family member 3A (KIF3A), mRNA
          Length = 2447

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 45  gtatgccaatcgtgcacggaatattcaaaataaagc 80
           |||||||||||||||   ||||||| ||||||||||
Sbjct: 915 gtatgccaatcgtgctaagaatattaaaaataaagc 950



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>gb|AC156548.13| Mus musculus chromosome 5, clone RP23-412C8, complete sequence
          Length = 197890

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    tacagcagagatgcaaaaat 121
              ||||||||||||||||||||
Sbjct: 139965 tacagcagagatgcaaaaat 139946



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>gb|AC004237.1| Homo sapiens chromosome 5, P1 clone 565a12 (LBNL H23), complete
             sequence
          Length = 38715

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 45    gtatgccaatcgtgcacggaatattcaaaataaagc 80
             |||||||||||||||   ||||||| ||||||||||
Sbjct: 29305 gtatgccaatcgtgctaagaatattaaaaataaagc 29340



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>gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosome 5, complete sequence
          Length = 198036

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    cccagttacagcagagatgc 115
             ||||||||||||||||||||
Sbjct: 37262 cccagttacagcagagatgc 37243



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>gb|BC045542.1| Homo sapiens kinesin family member 3A, mRNA (cDNA clone MGC:57178
            IMAGE:5298675), complete cds
          Length = 3292

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1164 gtatgccaatcgtgctaagaatattaaaaataaagc 1199



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>ref|NM_007054.5| Homo sapiens kinesin family member 3A (KIF3A), mRNA
          Length = 6257

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1165 gtatgccaatcgtgctaagaatattaaaaataaagc 1200



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>gb|AC002433.2| Homo sapiens BAC clone CTA-317M2 from 7, complete sequence
          Length = 139919

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 377    ttgaaaatgctggtagtgaa 396
              ||||||||||||||||||||
Sbjct: 109734 ttgaaaatgctggtagtgaa 109753



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>emb|CR524826.13| Zebrafish DNA sequence from clone CH211-227A6 in linkage group 16,
              complete sequence
          Length = 136920

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 205    caacaaaaagtctctctacttgag 228
              ||||||||| ||||||||||||||
Sbjct: 119470 caacaaaaattctctctacttgag 119493



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>gb|AC132222.3| Mus musculus BAC clone RP24-549C2 from chromosome 5, complete sequence
          Length = 173603

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     cccagttacagcagagatgc 115
              ||||||||||||||||||||
Sbjct: 172327 cccagttacagcagagatgc 172308



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>gb|BC032599.1| Homo sapiens kinesin family member 3A, mRNA (cDNA clone
            IMAGE:5533541), containing frame-shift errors
          Length = 1367

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1153 gtatgccaatcgtgctaagaatattaaaaataaagc 1188



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>gb|BC020890.1| Homo sapiens kinesin family member 3A, mRNA (cDNA clone
            IMAGE:4693968), containing frame-shift errors
          Length = 1443

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1135 gtatgccaatcgtgctaagaatattaaaaataaagc 1170



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>gb|AC163219.3| Mus musculus chromosome 5, clone RP24-155K17, complete sequence
          Length = 156494

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tacagcagagatgcaaaaat 121
             ||||||||||||||||||||
Sbjct: 53591 tacagcagagatgcaaaaat 53572



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>gb|AC137824.25| Medicago truncatula clone mth2-10l10, complete sequence
          Length = 114536

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                          
Query: 2      gtcctgctgattctaatgcagaggaaaccataaatacactcaagtatgccaatcgtgcac 61
              ||||||||||   |||||| ||||||||| | || ||  | |||||||| ||||||||||
Sbjct: 108079 gtcctgctgacattaatgccgaggaaaccctcaacactttgaagtatgcaaatcgtgcac 108138

                              
Query: 62     ggaatattcaaaataa 77
              | ||||| | ||||||
Sbjct: 108139 gcaatatccgaaataa 108154



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>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the
             3' end of the PEX14 gene for peroxisomal biogenesis factor
             14, the 3' end of the gene for a novel protein (FLJ34970,
             FLJ20321, FLJ12223) and two CpG islands, complete sequence
          Length = 143285

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   agagtgaacttctgttttcc 165
             ||||||||||||||||||||
Sbjct: 24030 agagtgaacttctgttttcc 24049



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>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome
          Length = 1581384

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    tattgaaaatgctggtagtg 394
              ||||||||||||||||||||
Sbjct: 743339 tattgaaaatgctggtagtg 743358



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>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08,
             complete sequence
          Length = 106975

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   tattgaaaatgctggtagtg 394
             ||||||||||||||||||||
Sbjct: 49476 tattgaaaatgctggtagtg 49457



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>emb|CR861275.1| Pongo pygmaeus mRNA; cDNA DKFZp459M153 (from clone DKFZp459M153)
          Length = 3273

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1159 gtatgccaatcgtgctaagaatattaaaaataaagc 1194



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>emb|CR621012.1| full-length cDNA clone CS0DJ015YJ21 of T cells (Jurkat cell line) Cot
            10-normalized of Homo sapiens (human)
          Length = 2269

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1168 gtatgccaatcgtgctaagaatattaaaaataaagc 1203



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>emb|BX890611.8| Zebrafish DNA sequence from clone DKEYP-86H10, complete sequence
          Length = 181642

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 205   caacaaaaagtctctctacttgag 228
             ||||||||| ||||||||||||||
Sbjct: 24206 caacaaaaattctctctacttgag 24229



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>gb|AC157216.2| Pan troglodytes BAC clone CH251-66E23 from chromosome unknown, complete
             sequence
          Length = 165669

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 45    gtatgccaatcgtgcacggaatattcaaaataaagc 80
             |||||||||||||||   ||||||| ||||||||||
Sbjct: 31193 gtatgccaatcgtgctaagaatattaaaaataaagc 31228



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>dbj|AB169362.1| Macaca fascicularis testis cDNA, clone: QtsA-19288, similar to human
            kinesin family member 3A (KIF3A), mRNA, RefSeq:
            NM_007054.4
          Length = 2291

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1128 gtatgccaatcgtgctaagaatattaaaaataaagc 1163



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      tattgaaaatgctggtagtg 394
                ||||||||||||||||||||
Sbjct: 19894668 tattgaaaatgctggtagtg 19894649



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>gb|AC008901.5|AC008901 Homo sapiens chromosome 5 clone CTD-2245E22, complete sequence
          Length = 165916

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    gattctaatgcagaggaaac 29
             ||||||||||||||||||||
Sbjct: 29589 gattctaatgcagaggaaac 29608



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>gb|AC073632.4| Homo sapiens BAC clone RP11-202H24 from 2, complete sequence
          Length = 40132

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 189   agaatttcagttgctgcaacaaaaagtc 216
             ||||||||| |||||| |||||||||||
Sbjct: 28505 agaatttcatttgctgaaacaaaaagtc 28478



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>gb|BC039592.1| Homo sapiens, clone IMAGE:5403936, mRNA, partial cds
          Length = 1342

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1127 gtatgccaatcgtgctaagaatattaaaaataaagc 1162



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>gb|AC171917.14| Mus musculus chromosome 8, clone RP23-390K13, complete sequence
          Length = 217234

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    tttcagttgctgcaacaaaa 212
              ||||||||||||||||||||
Sbjct: 115506 tttcagttgctgcaacaaaa 115525



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>gb|AC171678.8| Mus musculus chromosome 8, clone RP24-104E12, complete sequence
          Length = 175681

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   tttcagttgctgcaacaaaa 212
             ||||||||||||||||||||
Sbjct: 24437 tttcagttgctgcaacaaaa 24456



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>gb|AF041853.1|AF041853 Homo sapiens kinesin family member protein KIF3A mRNA, complete cds
          Length = 2109

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1011 gtatgccaatcgtgctaagaatattaaaaataaagc 1046



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>emb|AM177178.1| Homo sapiens mRNA for kinesin-like protein KIF3Abeta (KIF3A gene)
          Length = 2178

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1011 gtatgccaatcgtgctaagaatattaaaaataaagc 1046



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>gb|AC161596.2| Mus musculus BAC clone RP23-477K6 from chromosome 9, complete sequence
          Length = 187832

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    tttcagttgctgcaacaaaa 212
              ||||||||||||||||||||
Sbjct: 113224 tttcagttgctgcaacaaaa 113205



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>dbj|AB209780.1| Homo sapiens mRNA for Kinesin-like protein KIF3A variant protein
          Length = 2573

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 45   gtatgccaatcgtgcacggaatattcaaaataaagc 80
            |||||||||||||||   ||||||| ||||||||||
Sbjct: 1118 gtatgccaatcgtgctaagaatattaaaaataaagc 1153



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>emb|AL772224.2| Mouse DNA sequence from clone RP23-131N18 on chromosome 2, complete
             sequence
          Length = 182544

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 222   acttgagttaaaaatttcagaact 245
             ||||||||| ||||||||||||||
Sbjct: 30164 acttgagtttaaaatttcagaact 30187



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>emb|AL133401.16| Mouse DNA sequence from clone RP21-72L18 on chromosome 5, complete
             sequence
          Length = 158344

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tacagcagagatgcaaaaat 121
             ||||||||||||||||||||
Sbjct: 89868 tacagcagagatgcaaaaat 89849


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,552,440
Number of Sequences: 3902068
Number of extensions: 4552440
Number of successful extensions: 88242
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88090
Number of HSP's gapped (non-prelim): 153
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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