ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl43a02 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 122 bits (306), Expect = 2e-28 Identities = 59/86 (68%), Positives = 71/86 (82%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDYNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLP 331 D +NGGRGKVGAEA LEQW+ T+LP Sbjct: 63 DQDNGGRGKVGAEAELEQWV--TSLP 86
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 119 bits (298), Expect = 2e-27 Identities = 57/80 (71%), Positives = 67/80 (83%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDYNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 254 DHNNGGRGKVGAEANLEQWL 313 D NNG RGKVGAEA+LEQWL Sbjct: 62 DPNNGNRGKVGAEASLEQWL 81
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 119 bits (298), Expect = 2e-27 Identities = 60/86 (69%), Positives = 72/86 (83%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDYNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLP 331 D NNG RG+VG EA+LEQWL T+LP Sbjct: 61 DPNNGNRGRVGTEASLEQWL--TSLP 84
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 80.5 bits (197), Expect = 1e-15 Identities = 44/86 (51%), Positives = 57/86 (66%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDYNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG+ LTG G +KG VLM + LD DF A+++D V E+ G +TCQL+S+T Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLP 331 D NN GRG VG+EANLEQ L T+LP Sbjct: 61 DQNNEGRGIVGSEANLEQGL--TDLP 84
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 73.2 bits (178), Expect = 2e-13 Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 3/76 (3%) Frame = +2 Query: 95 LTGG---LRGAHLKGSVVLMRKNALDYNDFGATVMDGVTELLGRGVTCQLISSTNVDHNN 265 LTGG +KG+VVLM+KN LD+NDF A+ +D + E LG +T +L+SS D N Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSEN 68 Query: 266 GGRGKVGAEANLEQWL 313 G +GK+G A+LE W+ Sbjct: 69 GSKGKLGKAAHLEDWI 84
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 65.9 bits (159), Expect = 2e-11 Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 1/81 (1%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDYNDFGATVMDGVTELLGRGVTCQLIS-STN 250 +GGIV + G +KG V+LM+KN LD+ + GA+V+DG+++LLG+ V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 251 VDHNNGGRGKVGAEANLEQWL 313 D G GK+ A LE WL Sbjct: 63 YD---GLEGKLSNPAYLESWL 80
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 65.5 bits (158), Expect = 3e-11 Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDYNDFGATVMDGVTELLGRGVTCQLISST 247 ++ L GGL G H +KG+VV+M+KNALD+ D ++ D + E LG+ V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 248 NVDHNNGGRGKVGAEANLEQWLL 316 D NG +GK A LE +LL Sbjct: 61 QSDPANGLQGKHSNPAYLENFLL 83
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 60.8 bits (146), Expect = 8e-10 Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 6/84 (7%) Frame = +2 Query: 74 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDYNDFGATVMDGVTELLGR--GVTCQL 235 V G LTG + A ++G+ VL++K+ L DF A+++DGV +LG GV +L Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 236 ISSTNVDHNNGGRGKVGAEANLEQ 307 +S+T D +NGGRGK+G A+LE+ Sbjct: 63 VSATARDPSNGGRGKLGKPAHLEE 86
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 57.0 bits (136), Expect = 1e-08 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 5/82 (6%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDYNDFGATVMDGVTELLGRGVTCQLISST 247 ++ +T GL G H +KG+VV+M KN LD+ D ++ + ++LG+ V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 248 NVDHNNGGRGKVGAEANLEQWL 313 D NG +GK A LE L Sbjct: 61 QGDPTNGLQGKHSNPAYLENSL 82
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 57.0 bits (136), Expect = 1e-08 Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 21/98 (21%) Frame = +2 Query: 92 DLTGGLRGAH-LKGSVVLMRKNALDYN--------------DFGATV----MDGVTELLG 214 ++TG L H ++G+VVLMRKN LD+N D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 215 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWL--LPT 322 R V+ QLIS+T D N G+GKVG + LE L LPT Sbjct: 64 RSVSLQLISATKSDAN--GKGKVGKDTFLEGVLASLPT 99
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 53.1 bits (126), Expect = 2e-07 Identities = 39/99 (39%), Positives = 49/99 (49%), Gaps = 19/99 (19%) Frame = +2 Query: 65 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDYNDFG------------------ATV 187 MF V G+ L G G H +KG+VVLMRKN LD+N + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 188 MDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLE 304 +D +T LGR V QLIS+T N G+GKVG + LE Sbjct: 59 LDNLTAFLGRSVALQLISATKPLAN--GKGKVGKDTFLE 95
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 53.1 bits (126), Expect = 2e-07 Identities = 34/73 (46%), Positives = 46/73 (63%) Frame = +2 Query: 113 GAHLKGSVVLMRKNALDYNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAE 292 G +KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T D + G+GKVG + Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKD 61 Query: 293 ANLEQWLLPTNLP 331 LE + T+LP Sbjct: 62 TFLEG--INTSLP 72
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 53.1 bits (126), Expect = 2e-07 Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 15/94 (15%) Frame = +2 Query: 95 LTGGL--RGAHLKGSVVLMRKNALDYN-------------DFGATVMDGVTELLGRGVTC 229 + GGL RG +KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLP 331 QLIS+T D N G+GK+G LE + T+LP Sbjct: 61 QLISATKADAN--GKGKLGKATFLEG--IITSLP 90
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 52.8 bits (125), Expect = 2e-07 Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 14/86 (16%) Frame = +2 Query: 89 SDLTGGL-RGAHLKGSVVLMRKNALDYN-------------DFGATVMDGVTELLGRGVT 226 S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 227 CQLISSTNVDHNNGGRGKVGAEANLE 304 QLIS+T D G+GK+G LE Sbjct: 63 LQLISATKPDAT--GKGKLGKATFLE 86
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 50.8 bits (120), Expect = 8e-07 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 24/95 (25%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDYNDFGAT----------------------VMDGVTELLGRGV 223 +G +KG+VVLM KN LD+N + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWL--LPT 322 + QLIS+T D G GKVG E LE+ L LPT Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPT 99
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 50.8 bits (120), Expect = 8e-07 Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 22/90 (24%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDYNDFGAT----------------------VMDGVTELLGRGV 223 RG +KG+VVLM KN D+N+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWL 313 QLIS+T D G GKVG + LE+ L Sbjct: 67 AIQLISATKTD--GLGNGKVGKQTFLEKHL 94
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 48.5 bits (114), Expect = 4e-06 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 20/94 (21%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDYN--------------------DFGATVMDGVTELLGRGVTC 229 RG LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLP 331 +LIS+T D + G+GKV EA LE L T++P Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLL--TSIP 97
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 43.1 bits (100), Expect = 2e-04 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 14/87 (16%) Frame = +2 Query: 104 GLRGAHLKGSVVLMRKNALDYND-------------FGATVMDGVTELLGRGVTCQLISS 244 G +G +KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 245 TNVDHNNGGRGKVGAEANLE-QWLLPT 322 T D GG+GK+G NL + LPT Sbjct: 64 TKAD---GGKGKIGKSTNLRGKITLPT 87
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 34.3 bits (77), Expect = 0.079 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = -1 Query: 273 RPPLLWSTLVELMSWQVTPRPRSSVT-----PSMTVAPKSL*SSAFLRMRTTEPLRWAPR 109 R P L++ L S PRPRS+ PS AP + + R+ PL W P+ Sbjct: 228 RSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQ 287 Query: 108 RPPVRSLTMPPTP 70 R ++L+ PPTP Sbjct: 288 R---QTLSRPPTP 297
>YAI7_SCHPO (Q09894) Hypothetical protein C24B11.07c in chromosome I| Length = 561 Score = 31.2 bits (69), Expect = 0.67 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Frame = -1 Query: 318 GRSHCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSL*SSAFLRMR 139 G+ + R SAP+ + + + ++++S RS +PS+ +SL S R Sbjct: 374 GKPNMGRIPSAPSLSKGRAMTADNMDMLSLTTRRSRRSLYSPSLMQMQQSLKSDYEGLGR 433 Query: 138 TTEPLRWAPR-RPPVR 94 T +P R+APR PPVR Sbjct: 434 TFDP-RFAPRGSPPVR 448
>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ| domain-containing protein) Length = 910 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -1 Query: 225 VTPRPRSSVTPSMTVAPKSL*SSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 64 V P P S +PS AP L SS + ++ W R PP + +PP P+I Sbjct: 563 VMPHPPSVNSPSKVPAPPVLPSSGHVSSSSSP---WVQRTPP--PIPIPPPPSI 611
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 29.3 bits (64), Expect = 2.5 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -1 Query: 285 PTFPRP-PLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSL*SSAFLRMRTTEPLRWAPR 109 P P+P P ++ + S P P++S P+ T +PK T+P + Sbjct: 84 PATPKPTPPTYTPSPKPKSPVYPPPPKASTPPTYTPSPKP---------PATKPPTYPTP 134 Query: 108 RPPVRSLTMPPTPNIF 61 +PP T PPTP ++ Sbjct: 135 KPPA---TKPPTPPVY 147
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 28.9 bits (63), Expect = 3.3 Identities = 21/70 (30%), Positives = 29/70 (41%) Frame = -1 Query: 309 HCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSL*SSAFLRMRTTE 130 H S P+ P P L ST+ + + V ++S TP A SS + T Sbjct: 128 HTPTTESPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNSSGVPPTA 187 Query: 129 PLRWAPRRPP 100 P+ AP PP Sbjct: 188 PVTEAPTSPP 197
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 28.9 bits (63), Expect = 3.3 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -1 Query: 282 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSL*SSAFLRMRTTEPLRWAPR 109 T P PP M+ +TP P S+ T P+ T +P + ++ T P P Sbjct: 1498 TTPSPP---------MTTPITP-PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI 1547 Query: 108 RPPVRSLTMPPT 73 PP + T+PPT Sbjct: 1548 TPPTSTTTLPPT 1559 Score = 28.5 bits (62), Expect = 4.3 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -1 Query: 282 TFPRPPLLWSTLVELMSWQVTPRPRSSVT----PSMTVAPKSL*SSAFLRMRTTEPLRWA 115 T P PP + +T + TP P ++ T P+ T +P + TT P Sbjct: 1584 TTPSPPTITTTTPPPTT---TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 1640 Query: 114 PRRPPVRSLTMPPT 73 P PP + T PPT Sbjct: 1641 PSPPPTTTTTPPPT 1654 Score = 28.1 bits (61), Expect = 5.7 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -1 Query: 282 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSL*SSAFLRMRTTEPLRWAPR 109 T P PP+ +T + TP P ++ P+ T +P + ++ T P P Sbjct: 1452 TTPSPPISTTTTPPPTT---TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPI 1508 Query: 108 RPPVRSLTMPPT 73 PP + T+PPT Sbjct: 1509 TPPASTTTLPPT 1520
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +2 Query: 44 LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 163 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 115 APEAPRQVAHDAADAKHLRSISGECG 38 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +2 Query: 140 LMRKNALDYNDFGATVMDGVTELLGRGVTCQLISST 247 LM+K AL ++DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 28.1 bits (61), Expect = 5.7 Identities = 22/74 (29%), Positives = 30/74 (40%) Frame = -1 Query: 288 APTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSL*SSAFLRMRTTEPLRWAPR 109 AP PP + + V M V +P SSV P+ T +L S P AP+ Sbjct: 1480 APVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPA-TAPSSTLPPSQSSFAHVPSPAPPAPQ 1538 Query: 108 RPPVRSLTMPPTPN 67 P +L+ P N Sbjct: 1539 HPSAAALSSAPADN 1552
>RSE1_CANAL (Q5A7S5) Pre-mRNA-splicing factor RSE1| Length = 1219 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 4/48 (8%) Frame = +2 Query: 134 VVLMRKNALDY----NDFGATVMDGVTELLGRGVTCQLISSTNVDHNN 265 V M KN L Y N G+ + E + V C I + N DHNN Sbjct: 174 VAAMEKNKLFYKIESNSSGSKELSSPLEAHSKQVLCLKIVALNTDHNN 221
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 28.1 bits (61), Expect = 5.7 Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Frame = -3 Query: 187 DGGAEVVVVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 47 DGGA V ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 222 TPRPRSSVTPSMTVAPKSL*SSAFLRMRTT 133 TP P S +PS+ +L S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 27.7 bits (60), Expect = 7.4 Identities = 19/51 (37%), Positives = 20/51 (39%) Frame = -1 Query: 222 TPRPRSSVTPSMTVAPKSL*SSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 70 TP P S TPS T P S T P P P S T PP+P Sbjct: 136 TPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP---TPTPSPTPSPTPPPSP 183
>PRP45_EMENI (Q5AU50) Pre-mRNA-splicing factor prp45 (Pre-mRNA-processing| protein 45) Length = 583 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 50 RDRAKMFGVGGIVSDLTGGLRGAHLK 127 +D A FG+ +++D+TGG GA K Sbjct: 535 KDTADPFGIDSMIADVTGGAGGAGQK 560
>FLT3L_HUMAN (P49771) SL cytokine precursor (Fms-related tyrosine kinase 3| ligand) (Flt3 ligand) (Flt3L) Length = 235 Score = 27.3 bits (59), Expect = 9.7 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 14/48 (29%) Frame = -1 Query: 294 ASAPTFPRPPLLWSTLVEL----------MSWQ----VTPRPRSSVTP 193 A+APT P+PPLL L+ + + WQ TPRP V P Sbjct: 176 ATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPP 223
>CI079_HUMAN (Q6ZUB1) Protein C9orf79| Length = 1445 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 243 ELMSWQVTPRPR-SSVTPSMTVAPKSL*SSAFLRMRTTEPLRWAPRRPPVRS--LTMPPT 73 E + W + RP+ V PS+ +++ S + P W+P+ P+ +T P Sbjct: 565 EYLEWPLKKRPKWKRVLPSLLKKSQAVLSQPTAHLPQERPASWSPKSAPILPGVVTSPEL 624 Query: 72 P 70 P Sbjct: 625 P 625
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 27.3 bits (59), Expect = 9.7 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%) Frame = -3 Query: 187 DGGAEVVVVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 65 DGGA V ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>HUNB_DROIK (O46242) Protein hunchback (Fragments)| Length = 193 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/68 (25%), Positives = 34/68 (50%) Frame = -1 Query: 273 RPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSL*SSAFLRMRTTEPLRWAPRRPPVR 94 RPP L + + +M + P P ++ T + T A S ++A + +++ + L+ P Sbjct: 101 RPPGLPNPMQTIMPANMRPSPTATTTATTTAAAASTTTAATVALQSNDKLQ---ALTPPM 157 Query: 93 SLTMPPTP 70 +T P +P Sbjct: 158 DVTPPKSP 165
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -1 Query: 219 PRPRSSVTPSMTVAPKSL*SSAFLRMRTTEPLRWAPRRPPVRS 91 P P SS TP++ V P + ++ L +T+P P+ PV S Sbjct: 1026 PPPASSATPALHVQPLAPAAAPSLLQASTQPEVLLPKPAPVYS 1068 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,558,450 Number of Sequences: 219361 Number of extensions: 579682 Number of successful extensions: 2493 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2397 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2474 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
