Clone Name | bastl42h11 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK072640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P13, full insert sequence Length = 3055 Score = 276 bits (139), Expect = 5e-71 Identities = 218/244 (89%), Gaps = 9/244 (3%) Strand = Plus / Plus Query: 147 cctgatgcgcagccgcccgcgggcgccatggagctcgtccccttcaagcccgcggcgggg 206 |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct: 61 cctgatgcccagccgcccgcgggggccatggagctcgtccccttcaagcccgaggccggg 120 Query: 207 gccctcgtcgagtggggcggcg-------cggg--ctcgatccccgcgatggtggcggcg 257 ||||| ||||||| |||||||| |||| ||||||||| || |||||||||||| Sbjct: 121 gccctggtcgagtcgggcggcggggcccacggggactcgatcccggccatggtggcggcg 180 Query: 258 cagcagcagcagctgcacgcgcaggcggaccagctccagcgcctcgtcgtcgcccagtgc 317 |||||| | | |||||||||||||| |||||||||||||| |||||||||||| |||||| Sbjct: 181 cagcaggaactgctgcacgcgcaggtggaccagctccagctcctcgtcgtcgcgcagtgc 240 Query: 318 cgcctcaccggcgtcaaccctctcgcgcaggagatggctgctggtgcattgtctatcaag 377 |||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 241 cgcctcaccggcgtcaaccccctcgcccaggagatggctgctggggcattgtctatcaag 300 Query: 378 atag 381 |||| Sbjct: 301 atag 304
>dbj|AK066698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073H18, full insert sequence Length = 3884 Score = 276 bits (139), Expect = 5e-71 Identities = 218/244 (89%), Gaps = 9/244 (3%) Strand = Plus / Plus Query: 147 cctgatgcgcagccgcccgcgggcgccatggagctcgtccccttcaagcccgcggcgggg 206 |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct: 81 cctgatgcccagccgcccgcgggggccatggagctcgtccccttcaagcccgaggccggg 140 Query: 207 gccctcgtcgagtggggcggcg-------cggg--ctcgatccccgcgatggtggcggcg 257 ||||| ||||||| |||||||| |||| ||||||||| || |||||||||||| Sbjct: 141 gccctggtcgagtcgggcggcggggcccacggggactcgatcccggccatggtggcggcg 200 Query: 258 cagcagcagcagctgcacgcgcaggcggaccagctccagcgcctcgtcgtcgcccagtgc 317 |||||| | | |||||||||||||| |||||||||||||| |||||||||||| |||||| Sbjct: 201 cagcaggaactgctgcacgcgcaggtggaccagctccagctcctcgtcgtcgcgcagtgc 260 Query: 318 cgcctcaccggcgtcaaccctctcgcgcaggagatggctgctggtgcattgtctatcaag 377 |||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 261 cgcctcaccggcgtcaaccccctcgcccaggagatggctgctggggcattgtctatcaag 320 Query: 378 atag 381 |||| Sbjct: 321 atag 324
>ref|NM_190043.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3507 Score = 238 bits (120), Expect = 1e-59 Identities = 193/217 (88%), Gaps = 9/217 (4%) Strand = Plus / Plus Query: 174 atggagctcgtccccttcaagcccgcggcgggggccctcgtcgagtggggcggcg----- 228 ||||||||||||||||||||||||| ||| |||||||| ||||||| |||||||| Sbjct: 1 atggagctcgtccccttcaagcccgaggccggggccctggtcgagtcgggcggcggggcc 60 Query: 229 --cggg--ctcgatccccgcgatggtggcggcgcagcagcagcagctgcacgcgcaggcg 284 |||| ||||||||| || |||||||||||||||||| | | |||||||||||||| | Sbjct: 61 cacggggactcgatcccggccatggtggcggcgcagcaggaactgctgcacgcgcaggtg 120 Query: 285 gaccagctccagcgcctcgtcgtcgcccagtgccgcctcaccggcgtcaaccctctcgcg 344 ||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 121 gaccagctccagctcctcgtcgtcgcgcagtgccgcctcaccggcgtcaaccccctcgcc 180 Query: 345 caggagatggctgctggtgcattgtctatcaagatag 381 ||||||||||||||||| ||||||||||||||||||| Sbjct: 181 caggagatggctgctggggcattgtctatcaagatag 217
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 230 bits (116), Expect = 3e-57 Identities = 192/217 (88%), Gaps = 9/217 (4%) Strand = Plus / Plus Query: 147 cctgatgcgcagccgcccgcgggcgccatggagctcgtccccttcaagcccgcggcgggg 206 |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct: 40976949 cctgatgcccagccgcccgcgggggccatggagctcgtccccttcaagcccgaggccggg 40977008 Query: 207 gccctcgtcgagtggggcggcg-------cggg--ctcgatccccgcgatggtggcggcg 257 ||||| ||||||| |||||||| |||| ||||||||| || |||||||||||| Sbjct: 40977009 gccctggtcgagtcgggcggcggggcccacggggactcgatcccggccatggtggcggcg 40977068 Query: 258 cagcagcagcagctgcacgcgcaggcggaccagctccagcgcctcgtcgtcgcccagtgc 317 |||||| | | |||||||||||||| |||||||||||||| |||||||||||| |||||| Sbjct: 40977069 cagcaggaactgctgcacgcgcaggtggaccagctccagctcctcgtcgtcgcgcagtgc 40977128 Query: 318 cgcctcaccggcgtcaaccctctcgcgcaggagatgg 354 |||||||||||||||||||| ||||| |||||||||| Sbjct: 40977129 cgcctcaccggcgtcaaccccctcgcccaggagatgg 40977165 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 353 ggctgctggtgcattgtctatcaagatag 381 ||||||||| ||||||||||||||||||| Sbjct: 40978173 ggctgctggggcattgtctatcaagatag 40978201 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 35656934 ggcggcgcagcagcagcagc 35656915
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 230 bits (116), Expect = 3e-57 Identities = 192/217 (88%), Gaps = 9/217 (4%) Strand = Plus / Plus Query: 147 cctgatgcgcagccgcccgcgggcgccatggagctcgtccccttcaagcccgcggcgggg 206 |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct: 13879 cctgatgcccagccgcccgcgggggccatggagctcgtccccttcaagcccgaggccggg 13938 Query: 207 gccctcgtcgagtggggcggcg-------cggg--ctcgatccccgcgatggtggcggcg 257 ||||| ||||||| |||||||| |||| ||||||||| || |||||||||||| Sbjct: 13939 gccctggtcgagtcgggcggcggggcccacggggactcgatcccggccatggtggcggcg 13998 Query: 258 cagcagcagcagctgcacgcgcaggcggaccagctccagcgcctcgtcgtcgcccagtgc 317 |||||| | | |||||||||||||| |||||||||||||| |||||||||||| |||||| Sbjct: 13999 cagcaggaactgctgcacgcgcaggtggaccagctccagctcctcgtcgtcgcgcagtgc 14058 Query: 318 cgcctcaccggcgtcaaccctctcgcgcaggagatgg 354 |||||||||||||||||||| ||||| |||||||||| Sbjct: 14059 cgcctcaccggcgtcaaccccctcgcccaggagatgg 14095 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 353 ggctgctggtgcattgtctatcaagatag 381 ||||||||| ||||||||||||||||||| Sbjct: 15103 ggctgctggggcattgtctatcaagatag 15131
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 230 bits (116), Expect = 3e-57 Identities = 192/217 (88%), Gaps = 9/217 (4%) Strand = Plus / Plus Query: 147 cctgatgcgcagccgcccgcgggcgccatggagctcgtccccttcaagcccgcggcgggg 206 |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct: 105374 cctgatgcccagccgcccgcgggggccatggagctcgtccccttcaagcccgaggccggg 105433 Query: 207 gccctcgtcgagtggggcggcg-------cggg--ctcgatccccgcgatggtggcggcg 257 ||||| ||||||| |||||||| |||| ||||||||| || |||||||||||| Sbjct: 105434 gccctggtcgagtcgggcggcggggcccacggggactcgatcccggccatggtggcggcg 105493 Query: 258 cagcagcagcagctgcacgcgcaggcggaccagctccagcgcctcgtcgtcgcccagtgc 317 |||||| | | |||||||||||||| |||||||||||||| |||||||||||| |||||| Sbjct: 105494 cagcaggaactgctgcacgcgcaggtggaccagctccagctcctcgtcgtcgcgcagtgc 105553 Query: 318 cgcctcaccggcgtcaaccctctcgcgcaggagatgg 354 |||||||||||||||||||| ||||| |||||||||| Sbjct: 105554 cgcctcaccggcgtcaaccccctcgcccaggagatgg 105590 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 353 ggctgctggtgcattgtctatcaagatag 381 ||||||||| ||||||||||||||||||| Sbjct: 106598 ggctgctggggcattgtctatcaagatag 106626
>gb|AF166527.1|AF166527 Zea mays flowering-time protein isoforms alpha and beta (ZmLD) gene, alternatively spliced products, complete cds Length = 10304 Score = 157 bits (79), Expect = 3e-35 Identities = 118/131 (90%) Strand = Plus / Plus Query: 224 cggcgcgggctcgatccccgcgatggtggcggcgcagcagcagcagctgcacgcgcaggc 283 |||||||||||||||||| ||||||||||||||||||||| || |||||| |||| Sbjct: 789 cggcgcgggctcgatcccggcgatggtggcggcgcagcaggagattttgcacgaacaggt 848 Query: 284 ggaccagctccagcgcctcgtcgtcgcccagtgccgcctcaccggcgtcaaccctctcgc 343 |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 849 ggaccagctccaacgcctcgtcgtcgctcagtgccgcctcaccggcgtcaaccccctcgc 908 Query: 344 gcaggagatgg 354 |||||||||| Sbjct: 909 ccaggagatgg 919 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 147 cctgatgcgcagccgcccgcgggcgccatggagctcgtccccttcaagcccgcggcgggg 206 |||||||| ||||| |||| ||| ||||||||||| |||| | ||||||||||||| || Sbjct: 697 cctgatgcccagccccccgtgggggccatggagcttgtcctcgtcaagcccgcggcagga 756 Query: 207 gccctcgtcgag 218 || ||||||||| Sbjct: 757 gctctcgtcgag 768 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 353 ggctgctggtgcattgtctatcaagatag 381 |||||| |||||||||||||||||||||| Sbjct: 1603 ggctgccggtgcattgtctatcaagatag 1631
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 151 atgcgcagccgcccgcgggcgccatggagctcgtccccttcaagcccgcg 200 |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 21891 atgcgcagccgcacgcgggcgccatggagctcgtccccttcaagcccgcg 21842 Score = 54.0 bits (27), Expect = 3e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 287 ccagctccagcgcctcgtcgtcgcccagtgccgcctcaccggcgtcaaccctctcgcgc 345 |||||||||||| ||||||||||| | || || | |||||||||||||||| ||||||| Sbjct: 21534 ccagctccagcggctcgtcgtcgcgccgt-cctcatcaccggcgtcaacccgctcgcgc 21477 Score = 42.1 bits (21), Expect = 1.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 57 catcacctccccctcgtgagccgcgcgccccgccgccaaaccctagccc 105 |||| ||||||| ||||||| ||| ||| ||||||||||| ||||||| Sbjct: 21980 catctcctccccatcgtgagttgcgtgcctcgccgccaaactctagccc 21932 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 232 gctcgatccccgcgatggtggcggcgcag 260 |||||||||| ||||||||||||||||| Sbjct: 21613 gctcgatcccgacgatggtggcggcgcag 21585
>ref|NM_184889.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1062 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 248 ggtggcggcgcagcagcagcagctg 272 ||||||||||||||||||||||||| Sbjct: 175 ggtggcggcgcagcagcagcagctg 199
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 248 ggtggcggcgcagcagcagcagctg 272 ||||||||||||||||||||||||| Sbjct: 31682953 ggtggcggcgcagcagcagcagctg 31682977 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 atggtggcggcgcagcagcagcagc 270 |||| |||||||||||||||||||| Sbjct: 4292964 atggcggcggcgcagcagcagcagc 4292988 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 34127873 ggcggcgcagcagcagcagc 34127854
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 248 ggtggcggcgcagcagcagcagctg 272 ||||||||||||||||||||||||| Sbjct: 8179 ggtggcggcgcagcagcagcagctg 8203
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 248 ggtggcggcgcagcagcagcagctg 272 ||||||||||||||||||||||||| Sbjct: 31773469 ggtggcggcgcagcagcagcagctg 31773493 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 atggtggcggcgcagcagcagcagc 270 |||| |||||||||||||||||||| Sbjct: 4293079 atggcggcggcgcagcagcagcagc 4293103 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 34218345 ggcggcgcagcagcagcagc 34218326
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctg 272 |||||||||||||||||||||| Sbjct: 10071020 ggcggcgcagcagcagcagctg 10070999 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 23493155 ggcggcgcagcagcagcagc 23493174 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 5588733 ggcggcgcagcagcagcagc 5588752 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 3708928 ggcggcgcagcagcagcagc 3708947
>gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinostaticus neocarzinostatin biosynthetic locus, complete sequence Length = 92294 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 255 gcgcagcagcagcagctgcacg 276 |||||||||||||||||||||| Sbjct: 458 gcgcagcagcagcagctgcacg 437
>dbj|AK063071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H02, full insert sequence Length = 987 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctg 272 |||||||||||||||||||||| Sbjct: 136 ggcggcgcagcagcagcagctg 157
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctg 272 |||||||||||||||||||||| Sbjct: 10070905 ggcggcgcagcagcagcagctg 10070884 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 23421346 ggcggcgcagcagcagcagc 23421365 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 5588722 ggcggcgcagcagcagcagc 5588741 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 3708902 ggcggcgcagcagcagcagc 3708921
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctg 272 |||||||||||||||||||||| Sbjct: 91601 ggcggcgcagcagcagcagctg 91622
>ref|XM_470552.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1620 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 atggtggcggcgcagcagcagcagc 270 |||| |||||||||||||||||||| Sbjct: 1 atggcggcggcgcagcagcagcagc 25
>gb|BT016672.1| Zea mays clone Contig505 mRNA sequence Length = 808 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 gcggcgcagcagcagcagctg 272 ||||||||||||||||||||| Sbjct: 151 gcggcgcagcagcagcagctg 171
>gb|BT016380.1| Zea mays clone Contig213 mRNA sequence Length = 1212 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cgccgccaaaccctagccccg 107 ||||||||||||||||||||| Sbjct: 1139 cgccgccaaaccctagccccg 1119
>gb|BT016821.1| Zea mays clone Contig654 mRNA sequence Length = 1819 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 gcggcgcagcagcagcagctg 272 ||||||||||||||||||||| Sbjct: 1585 gcggcgcagcagcagcagctg 1565
>gb|AF528565.1| Zea mays cultivar BSSS53 chromosome 4 clone BAC 072, complete sequence Length = 106246 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 gcggcgcagcagcagcagctg 272 ||||||||||||||||||||| Sbjct: 21794 gcggcgcagcagcagcagctg 21814
>gb|AC009219.7| Drosophila melanogaster clone BACR32N16, complete sequence Length = 159007 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cggcgcagcagcagcagctgc 273 ||||||||||||||||||||| Sbjct: 128085 cggcgcagcagcagcagctgc 128105
>ref|XM_430503.1| PREDICTED: Gallus gallus hypothetical gene supported by CR385130 (LOC427353), mRNA Length = 924 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gcagcagcagcagctgcacgc 277 ||||||||||||||||||||| Sbjct: 296 gcagcagcagcagctgcacgc 316
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccgcgatggtggcggcgcagc 261 ||||||||||||||||||||| Sbjct: 614828 ccgcgatggtggcggcgcagc 614848
>ref|XM_756908.1| Ustilago maydis 521 hypothetical protein (UM05854.1) partial mRNA Length = 4965 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagct 271 ||||||||||||||||||||| Sbjct: 4194 ggcggcgcagcagcagcagct 4214
>ref|XM_806124.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506797.120) partial mRNA Length = 558 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 tggcggcgcagcagcagcagc 270 ||||||||||||||||||||| Sbjct: 224 tggcggcgcagcagcagcagc 244
>ref|XM_814224.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511907.100) partial mRNA Length = 423 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 tggcggcgcagcagcagcagc 270 ||||||||||||||||||||| Sbjct: 98 tggcggcgcagcagcagcagc 118
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence Length = 634917 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ccaccctgatgcgcagccgcc 163 ||||||||||||||||||||| Sbjct: 119940 ccaccctgatgcgcagccgcc 119920
>emb|CR385130.1| Gallus gallus finished cDNA, clone ChEST400n19 Length = 729 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gcagcagcagcagctgcacgc 277 ||||||||||||||||||||| Sbjct: 99 gcagcagcagcagctgcacgc 119
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 tggtggcggcgcagcagcagc 267 ||||||||||||||||||||| Sbjct: 8255986 tggtggcggcgcagcagcagc 8256006
>gb|AC016157.2|AC016157 Drosophila melanogaster, chromosome 3R, region 86C-86D, BAC clone BACR48M22, complete sequence Length = 161549 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cggcgcagcagcagcagctgc 273 ||||||||||||||||||||| Sbjct: 24092 cggcgcagcagcagcagctgc 24112
>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624H09 Length = 158719 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 tggtggcggcgcagcagcagc 267 ||||||||||||||||||||| Sbjct: 148349 tggtggcggcgcagcagcagc 148369
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 tggtggcggcgcagcagcagc 267 ||||||||||||||||||||| Sbjct: 49491 tggtggcggcgcagcagcagc 49511
>gb|AY107012.1| Zea mays PCO099293 mRNA sequence Length = 976 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 gcggcgcagcagcagcagctg 272 ||||||||||||||||||||| Sbjct: 210 gcggcgcagcagcagcagctg 230
>gb|AY104066.1| Zea mays PCO123558 mRNA sequence Length = 1927 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 gcggcgcagcagcagcagctg 272 ||||||||||||||||||||| Sbjct: 241 gcggcgcagcagcagcagctg 261
>gb|AE003689.2| Drosophila melanogaster chromosome 3R, section 27 of 118 of the complete sequence Length = 215899 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cggcgcagcagcagcagctgc 273 ||||||||||||||||||||| Sbjct: 35179 cggcgcagcagcagcagctgc 35199
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 atggtggcggcgcagcagcagcagc 270 |||| |||||||||||||||||||| Sbjct: 121579 atggcggcggcgcagcagcagcagc 121603
>gb|BC107697.1| Homo sapiens dynactin 3 (p22), transcript variant 1, mRNA (cDNA clone MGC:111190 IMAGE:6454606), complete cds Length = 848 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtgagccgcgcgccccgcc 90 |||||||||||||||||||| Sbjct: 120 cgtgagccgcgcgccccgcc 101
>ref|NM_185269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 441 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 45 ggcggcgcagcagcagcagc 64
>gb|AC109498.10| Mus musculus chromosome 5, clone RP23-22K24, complete sequence Length = 218246 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 70681 ggcggcgcagcagcagcagc 70662
>ref|XM_470138.1| Oryza sativa (japonica cultivar-group), mRNA Length = 778 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 78 ggcggcgcagcagcagcagc 59
>ref|XM_531208.1| PREDICTED: Pan troglodytes LOC464829 (LOC464829), mRNA Length = 4253 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcccgcgggcgccatggagc 180 |||||||||||||||||||| Sbjct: 3235 gcccgcgggcgccatggagc 3216
>ref|XM_467383.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1284 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgcacgcgcagg 282 ||||||| |||||||||||||||| |||||| Sbjct: 108 ggcggcggcgcagcagcagctgcacccgcagg 139
>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940135D9, complete sequence Length = 93659 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 gcgcagcagcagcagctgcacgcgcagg 282 |||||||||| ||||| ||||||||||| Sbjct: 88013 gcgcagcagcggcagcagcacgcgcagg 87986
>ref|XM_465114.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2692 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 ggcgtcaaccctctcgcgcaggag 350 |||||||||| ||||||||||||| Sbjct: 1416 ggcgtcaaccgtctcgcgcaggag 1439
>ref|XM_464062.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3705 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 tcgcccagtgccgcctcaccggcg 330 ||||||||| |||||||||||||| Sbjct: 239 tcgcccagttccgcctcaccggcg 262
>ref|NM_197231.1| Oryza sativa (japonica cultivar-group) putative RNA helicase (OSJNBb0073N24.12), mRNA Length = 2063 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 cagcagcagcagctgcacgcgcag 281 ||||||||||||| |||||||||| Sbjct: 217 cagcagcagcagcagcacgcgcag 240
>ref|XM_518378.1| PREDICTED: Pan troglodytes similar to Pre-B-cell leukemia transcription factor-2 (Homeobox protein PBX2) (G17 protein) (LOC462585), mRNA Length = 3345 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 349 ggcggctcagcagcagcagctgca 372
>ref|NM_190460.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 960 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 39 ggcggcgcagcagcagcagc 58
>ref|XM_478799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1757 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 178 ggcggcgcagcagcagcagc 197
>ref|XM_507376.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18 mRNA Length = 2418 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 187 ggcggcgcagcagcagcagc 206
>ref|XM_506420.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18 mRNA Length = 1772 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 320 ggcggcgcagcagcagcagc 339
>ref|XM_476420.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1473 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 767 ggcggcgcagcagcagcagc 786
>ref|XM_476545.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2319 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 tggtggcggcgcagcagcagcagc 270 |||||| ||||||||||||||||| Sbjct: 62 tggtggtggcgcagcagcagcagc 85
>ref|NM_002586.3| Homo sapiens pre-B-cell leukemia transcription factor 2 (PBX2), mRNA Length = 3210 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 671 ggcggctcagcagcagcagctgca 694
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 333639 ggcggcgcagcagcagcagc 333620 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ggtggcggcgcagcagcagc 267 |||||||||||||||||||| Sbjct: 52621 ggtggcggcgcagcagcagc 52602
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 33549 ggcggcgcagcagcagcagc 33530
>gb|U53271.1|AH006785S1 Mus musculus protein phosphatase 1cgamma (PP1cgamma) gene, exon 1 Length = 444 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cgcagcagcagcagctgcacgcgc 279 ||||||||||||||| |||||||| Sbjct: 180 cgcagcagcagcagcagcacgcgc 157
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gcagcagcagctgcacgcgc 279 |||||||||||||||||||| Sbjct: 1810653 gcagcagcagctgcacgcgc 1810634
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 gcgcagcagcagcagctgcacgcg 278 |||||||||||||||| ||||||| Sbjct: 155373 gcgcagcagcagcagcagcacgcg 155396 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 150687 ggcggcgcagcagcagcagc 150706
>gb|U89336.1|HSMHC3W5A Homo sapiens HLA class III region containing NOTCH4 gene, partial sequence, homeobox PBX2 (HPBX) gene, receptor for advanced glycosylation end products (RAGE) gene, complete cds, and 6 unidentified cds, complete sequence Length = 62944 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 14848 ggcggctcagcagcagcagctgca 14871
>gb|U77947.1|DMU77947 Drosophila melanogaster adenomatous polyposis coli (D-APC) mRNA, complete cds Length = 8401 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cggcgcagcagcagcagctg 272 |||||||||||||||||||| Sbjct: 647 cggcgcagcagcagcagctg 666
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 257 gcagcagcagcagctgcacgcgcaggcg 284 |||||||||||||| || |||||||||| Sbjct: 162707 gcagcagcagcagcggctcgcgcaggcg 162680
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 cagcagcagcagctgcacgcgcag 281 ||||||||||||| |||||||||| Sbjct: 20191 cagcagcagcagcagcacgcgcag 20168
>gb|BC082261.1| Homo sapiens pre-B-cell leukemia transcription factor 2, mRNA (cDNA clone MGC:99466 IMAGE:6425904), complete cds Length = 2174 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 423 ggcggctcagcagcagcagctgca 446
>gb|AF521665.1| Azoarcus sp. CIB anaerobic benzoate catabolism gene cluster, partial sequence Length = 19015 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 gatgcgcagccgcccgcgggcgccatgg 177 |||||||||||| ||||||||| ||||| Sbjct: 10982 gatgcgcagccggccgcgggcggcatgg 11009
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tcgtcgagtggggcggcgcg 230 |||||||||||||||||||| Sbjct: 4219516 tcgtcgagtggggcggcgcg 4219497
>ref|XM_607216.2| PREDICTED: Bos taurus similar to protease, serine, 33 (LOC528784), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 424 ggcggcgcagcagcagcagc 405
>ref|XM_324147.1| Neurospora crassa OR74A predicted protein (NCU04791.1) partial mRNA Length = 1011 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tggcggcgcagcagcagcag 269 |||||||||||||||||||| Sbjct: 557 tggcggcgcagcagcagcag 576
>gb|BC000319.2| Homo sapiens dynactin 3 (p22), transcript variant 2, mRNA (cDNA clone MGC:8470 IMAGE:2821720), complete cds Length = 922 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtgagccgcgcgccccgcc 90 |||||||||||||||||||| Sbjct: 102 cgtgagccgcgcgccccgcc 83
>gb|BC003004.1| Homo sapiens dynactin 3 (p22), transcript variant 2, mRNA (cDNA clone MGC:4002 IMAGE:2821720), complete cds Length = 922 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtgagccgcgcgccccgcc 90 |||||||||||||||||||| Sbjct: 102 cgtgagccgcgcgccccgcc 83
>ref|XM_955324.1| Neurospora crassa OR74A hypothetical protein (NCU04791.1) partial mRNA Length = 1011 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tggcggcgcagcagcagcag 269 |||||||||||||||||||| Sbjct: 557 tggcggcgcagcagcagcag 576
>gb|AC158301.4| Mus musculus chromosome 5, clone RP24-71D19, complete sequence Length = 234479 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 201569 ggcggcgcagcagcagcagc 201550
>gb|AY190955.1| Drosophila virilis clone DVIF01_37_D05 (D1427) genomic sequence Length = 43945 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcagcagcagcagctgcacg 276 |||||||||||||||||||| Sbjct: 22791 gcagcagcagcagctgcacg 22810
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcagcagcagcagctgcacg 276 |||||||||||||||||||| Sbjct: 160523 gcagcagcagcagctgcacg 160542
>ref|XM_838466.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1384) partial mRNA Length = 2151 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gcagcagcagctgcacgcgc 279 |||||||||||||||||||| Sbjct: 2089 gcagcagcagctgcacgcgc 2070
>ref|XM_817140.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0119) partial mRNA Length = 2922 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 257 gcagcagcagcagctgcacgcgcaggcg 284 |||||||||||||| || |||||||||| Sbjct: 1229 gcagcagcagcagcggctcgcgcaggcg 1256
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cagcagcagctgcacgcgcaggcg 284 ||||||||||||||||| |||||| Sbjct: 864661 cagcagcagctgcacgcccaggcg 864638
>emb|CR703598.2|CNS0G5UI Tetraodon nigroviridis full-length cDNA Length = 892 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cggcgcagcagcagcagctg 272 |||||||||||||||||||| Sbjct: 204 cggcgcagcagcagcagctg 223
>emb|CR684426.2|CNS0FR1Y Tetraodon nigroviridis full-length cDNA Length = 860 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cggcgcagcagcagcagctg 272 |||||||||||||||||||| Sbjct: 192 cggcgcagcagcagcagctg 211
>gb|AY358482.1| Homo sapiens clone DNA77631 HILV1821 (UNQ1821) mRNA, complete cds Length = 3437 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 2491 aggagatggctgctggggcattgt 2468
>emb|CR661664.2|CNS0F9IE Tetraodon nigroviridis full-length cDNA Length = 889 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cggcgcagcagcagcagctg 272 |||||||||||||||||||| Sbjct: 206 cggcgcagcagcagcagctg 225
>emb|BX284686.9| Human DNA sequence from clone DASS-39F23 on chromosome 6, complete sequence Length = 80063 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 57916 ggcggctcagcagcagcagctgca 57893
>emb|AL845464.5| Human DNA sequence from clone DAQB-143M3 on chromosome 6 Contains the C6orf31 gene for chromosome 6 open reading frame 31, the PPT2 gene for palmitoyl-protein thioesterase 2, the EGFL8 gene for EGF-like-domain, multiple 8, the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha), the RNF5 gene for ring finger protein 5, the AGER gene for advanced glycosylation end product-specific receptor, the PBX2 gene for pre-B-cell leukemia transcription factor 2, the GPSM3 gene (previously C6orf9) for G-protein signalling modulator 3 (AGS3-like, C. elegans), the 3' end of the Notch4 gene for the Notch homolog 4 (Drosophila) and five CpG islands, complete sequence Length = 56747 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 48155 ggcggctcagcagcagcagctgca 48132
>emb|AL662830.14| Human DNA sequence from clone XXbac-173E2 on chromosome 6 contains the RNF 5 gene for ring finger protein 5, the AGER gene for advanced glycosylation end product-specific receptor, the PBX2 gene for pre-B-cell leukemia transcription factor 2, the gene for chromosome 6 open reading frame 9, the NOTCH4 gene for Notch homolog 4 (Drosophila) and one CpG island, complete sequence Length = 103327 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 12038 ggcggctcagcagcagcagctgca 12015
>emb|AL662884.11| Human DNA sequence from clone XXbac-300A18 on chromosome 6 contains the 5' end of the TNXB gene for tenascin XB (TNXB, XB, TNX, XBS, HXBL, TENX, TNXB1, TNXB2, TNXBS), the CREBL1 gene for cAMP responsive element binding protein-like 1 (CREBL1, G13, CREB-RP), the FKBPL gene for FK506 binding protein like (FKBPL, NG7, DIR1), the gene for chromosome 6 open reading frame 31 (C6orf31, NG5), a putative novel transcript, the PPT2 gene for palmitoyl-protein thioesterase 2 (PPT2, G14), the gene for chromosome 6 open reading frame 8 (C6orf8, NG3), the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) (AGPAT1,G15, LPAATA, MGC5423, LPAAT-alpha), the RNF5 gene for ring finger protein 5 (RNF5, G16, NG2, RING5), the AGER gene for advanced glycosylation end product-specific receptor (AGER, RAGE), the PBX2 gene for pre-B-cell leukemia transcription factor 2 (PBX2, G17, HOX12, PBX2MHC), the C6orf9 gene for chromosome 6 open reading frame 9 (C6orf9, G18, NG1), the NOTCH4 gene for Notch homolog 4 (Drosophila) (NOTCH4, INT3, NOTCH3) and seven CpG islands, complete sequence Length = 137935 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 101227 ggcggctcagcagcagcagctgca 101204
>emb|AL445931.29| Human DNA sequence from clone RP11-374P20 on chromosome 9 Contains the 5' end of the VAV2 gene for vav 2 oncogene, a novel gene (FLJ35348), the 3' end of the BRD3 gene for bromodomain containing 3, a novel gene and five CpG islands, complete sequence Length = 175033 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcccgcgggcgccatggagc 180 |||||||||||||||||||| Sbjct: 105497 gcccgcgggcgccatggagc 105478
>emb|AL450283.16| Human DNA sequence from clone RP11-443P11 on chromosome 9 Contains the DCTN3 gene for dynactin 3 (p22), a dead ringer like-1 (Drosophila) protein (DRIL1) pseudogene, the SR-BP1 gene for sigma receptor (SR31747 binding protein 1), the 5' end of a variant of the GALT gene for galactose-1-phosphate uridylytransferase and three CpG islands, complete sequence Length = 34008 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cgtgagccgcgcgccccgcc 90 |||||||||||||||||||| Sbjct: 7911 cgtgagccgcgcgccccgcc 7930
>emb|AL449344.5| Human DNA sequence from clone RP11-280L17 on chromosome 9 Contains the 5' end of a novel gene, complete sequence Length = 178473 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 tggtggcggcgcagcagcagcagc 270 ||||||| |||||||||||||||| Sbjct: 26320 tggtggctgcgcagcagcagcagc 26297
>gb|BT009823.1| Homo sapiens pre-B-cell leukemia transcription factor 2 mRNA, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 400 ggcggctcagcagcagcagctgca 423
>gb|AY332475.1| Oryza sativa (japonica cultivar-group) MADS protein (MAF1) mRNA, complete cds Length = 1010 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 632 ggcggcgcagcagcagcagc 651
>emb|X80700.1|HSG17G H.sapiens G17 gene Length = 5443 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 1801 ggcggctcagcagcagcagctgca 1824
>emb|X59842.1|HSPBX2 Human PBX2 mRNA Length = 3236 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 696 ggcggctcagcagcagcagctgca 719
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 cagcagcagcagctgcacgcgcag 281 ||||||||||||| |||||||||| Sbjct: 86049 cagcagcagcagcagcacgcgcag 86026
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tcgtcgagtggggcggcgcg 230 |||||||||||||||||||| Sbjct: 60471 tcgtcgagtggggcggcgcg 60452
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tcgtcgagtggggcggcgcg 230 |||||||||||||||||||| Sbjct: 96498 tcgtcgagtggggcggcgcg 96479
>emb|CR933878.7| Human DNA sequence from clone DAMC-108L3 on chromosome 6, complete sequence Length = 102907 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 58296 ggcggctcagcagcagcagctgca 58273
>emb|CR812478.6| Human DNA sequence from clone DAAP-218M18 on chromosome 6, complete sequence Length = 75620 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 55469 ggcggctcagcagcagcagctgca 55446
>gb|BC067737.1| Homo sapiens cDNA clone IMAGE:5298595, partial cds Length = 2196 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 443 ggcggctcagcagcagcagctgca 466
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gctccagcgcctcgtcgtcgccca 313 ||||||||||||| |||||||||| Sbjct: 3447575 gctccagcgcctcctcgtcgccca 3447598
>emb|CR857576.1| Pongo pygmaeus mRNA; cDNA DKFZp469K0811 (from clone DKFZp469K0811) Length = 4731 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gcccgcgggcgccatggagc 180 |||||||||||||||||||| Sbjct: 35 gcccgcgggcgccatggagc 54
>emb|AL137358.1|HSM802043 Homo sapiens mRNA; cDNA DKFZp434C0126 (from clone DKFZp434C0126) Length = 1141 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 182 aggagatggctgctggggcattgt 159
>emb|AL050110.1|HSM800197 Homo sapiens mRNA; cDNA DKFZp586J0619 (from clone DKFZp586J0619) Length = 2241 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 1280 aggagatggctgctggggcattgt 1257
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 ggcgcagcagcagcagctgc 273 |||||||||||||||||||| Sbjct: 708391 ggcgcagcagcagcagctgc 708372
>gb|AY119252.1| Drosophila melanogaster SD21818 full insert cDNA Length = 1482 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tggcggcgcagcagcagcag 269 |||||||||||||||||||| Sbjct: 206 tggcggcgcagcagcagcag 187
>dbj|AK128479.1| Homo sapiens cDNA FLJ46624 fis, clone TLUNG2002055 Length = 1264 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 208 aggagatggctgctggggcattgt 231
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcagcagcagcagctgcacg 276 |||||||||||||||||||| Sbjct: 23780 gcagcagcagcagctgcacg 23799
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcagcagcagcagctgcacg 276 |||||||||||||||||||| Sbjct: 121827 gcagcagcagcagctgcacg 121846
>gb|AC102953.5| Homo sapiens BAC clone RP11-1246C19 from 7, complete sequence Length = 148996 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 127010 aggagatggctgctggggcattgt 127033
>dbj|AK091661.1| Homo sapiens cDNA FLJ34342 fis, clone FEBRA2009986, moderately similar to Dynactin 3 (p22); dynactin light chain Length = 3877 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtgagccgcgcgccccgcc 90 |||||||||||||||||||| Sbjct: 146 cgtgagccgcgcgccccgcc 127
>emb|CR601493.1| full-length cDNA clone CS0DL009YP19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2234 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 661 ggcggctcagcagcagcagctgca 684
>emb|CR600617.1| full-length cDNA clone CS0DA011YM19 of Neuroblastoma of Homo sapiens (human) Length = 1537 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 617 aggagatggctgctggggcattgt 594
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 gcagcagcagcagctgcacgcgca 280 ||||||||||||||||||| |||| Sbjct: 37263 gcagcagcagcagctgcacacgca 37286
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 gcagcagcagcagctgcacgcgca 280 ||||||||||||||||||| |||| Sbjct: 15976 gcagcagcagcagctgcacacgca 15999
>gb|AE011699.1| Xanthomonas axonopodis pv. citri str. 306, section 77 of 469 of the complete genome Length = 11301 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cagcagcagctgcacgcgcaggcg 284 ||||||||||||||||| |||||| Sbjct: 2064 cagcagcagctgcacgcccaggcg 2041
>emb|CR590499.1| full-length cDNA clone CS0CAP001YN05 of Thymus of Homo sapiens (human) Length = 1481 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 564 aggagatggctgctggggcattgt 541
>ref|NM_132412.1| Drosophila melanogaster CG9817-RA (CG9817), mRNA Length = 6497 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcagcagcagcagctgcacg 276 |||||||||||||||||||| Sbjct: 3111 gcagcagcagcagctgcacg 3130
>ref|NM_079641.2| Drosophila melanogaster Seryl-tRNA synthetase CG4938-RA (Aats-ser), mRNA Length = 1533 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tggcggcgcagcagcagcag 269 |||||||||||||||||||| Sbjct: 207 tggcggcgcagcagcagcag 188
>ref|NM_057804.2| Drosophila melanogaster APC-like CG1451-RA (Apc), mRNA Length = 8344 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cggcgcagcagcagcagctg 272 |||||||||||||||||||| Sbjct: 595 cggcgcagcagcagcagctg 614
>ref|XM_935548.1| PREDICTED: Homo sapiens integrator complex subunit 1, transcript variant 7 (INT1), mRNA Length = 6916 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 5975 aggagatggctgctggggcattgt 5952
>ref|XM_935842.1| PREDICTED: Homo sapiens integrator complex subunit 1, transcript variant 10 (INT1), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 841 aggagatggctgctggggcattgt 818
>ref|XM_379767.3| PREDICTED: Homo sapiens integrator complex subunit 1, transcript variant 2 (INT1), mRNA Length = 3086 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 2145 aggagatggctgctggggcattgt 2122
>ref|XM_942544.1| PREDICTED: Homo sapiens integrator complex subunit 1, transcript variant 11 (INT1), mRNA Length = 6914 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 5973 aggagatggctgctggggcattgt 5950
>ref|XM_946099.1| PREDICTED: Homo sapiens integrator complex subunit 1, transcript variant 15 (INT1), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 841 aggagatggctgctggggcattgt 818
>ref|XM_946098.1| PREDICTED: Homo sapiens integrator complex subunit 1, transcript variant 14 (INT1), mRNA Length = 3085 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 2144 aggagatggctgctggggcattgt 2121
>ref|XM_291222.6| PREDICTED: Homo sapiens integrator complex subunit 1, transcript variant 1 (INT1), mRNA Length = 6913 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 5972 aggagatggctgctggggcattgt 5949
>ref|XM_931345.1| PREDICTED: Homo sapiens integrator complex subunit 1, transcript variant 6 (INT1), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 841 aggagatggctgctggggcattgt 818
>ref|XM_931339.1| PREDICTED: Homo sapiens integrator complex subunit 1, transcript variant 5 (INT1), mRNA Length = 3084 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 2143 aggagatggctgctggggcattgt 2120
>emb|CR541889.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0733D for gene DCTN3, dynactin 3 (p22); complete cds, without stopcodon Length = 558 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtgagccgcgcgccccgcc 90 |||||||||||||||||||| Sbjct: 92 cgtgagccgcgcgccccgcc 73
>emb|BX927239.5| Human DNA sequence from clone DAMA-358M23 on chromosome 6, complete sequence Length = 102588 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 48131 ggcggctcagcagcagcagctgca 48108
>gb|AY279938.1| Oxycheilinus bimaculatus recombination-activating protein 2 (RAG2) gene, partial cds Length = 827 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 gcagcagctgcacgcgcaggcgga 286 ||||||||| |||||||||||||| Sbjct: 535 gcagcagctccacgcgcaggcgga 512
>ref|NG_002434.1| Homo sapiens pre-B-cell leukemia transcription factor pseudogene 1 (PBXP1) on chromosome 3 Length = 3402 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 765 ggcggctcagcagcagcagctgca 788
>tpg|BK005720.1| TPA: TPA_exp: Homo sapiens integrator complex subunit 1 mRNA, partial cds Length = 4434 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 3490 aggagatggctgctggggcattgt 3467
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgcacgcgcagg 282 ||||||| |||||||||||||||| |||||| Sbjct: 136113 ggcggcggcgcagcagcagctgcacccgcagg 136144
>gb|AC148714.1| Macaca mulatta Major Histocompatibility Complex BAC MMU457P02, complete sequence Length = 159822 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 17640 ggcggctcagcagcagcagctgca 17617
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 cagcagcagcagctgcacgcgcag 281 ||||||||||||| |||||||||| Sbjct: 18724771 cagcagcagcagcagcacgcgcag 18724748
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 23124964 ggcggcgcagcagcagcagc 23124983 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcagcagcagcagctgcacg 276 |||||||||||||||||||| Sbjct: 17566827 gcagcagcagcagctgcacg 17566808 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 tggtggcggcgcagcagcagcagc 270 |||||| ||||||||||||||||| Sbjct: 1883770 tggtggtggcgcagcagcagcagc 1883793 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 1045989 ggcggcgcagcagcagcagc 1046008
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 3155832 ggcggcgcagcagcagcagc 3155813
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgcacgcgcagg 282 ||||||| |||||||||||||||| |||||| Sbjct: 29226518 ggcggcggcgcagcagcagctgcacccgcagg 29226487 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 ggcgtcaaccctctcgcgcaggag 350 |||||||||| ||||||||||||| Sbjct: 11665190 ggcgtcaaccgtctcgcgcaggag 11665167 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 tcgcccagtgccgcctcaccggcg 330 ||||||||| |||||||||||||| Sbjct: 1978803 tcgcccagttccgcctcaccggcg 1978826
>gb|AC007574.6|AC007574 Drosophila melanogaster, chromosome 2R, region 60D-60D, BAC clone BACR11C07, complete sequence Length = 171151 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 84766 ggcggcgcagcagcagcagc 84785
>gb|AC006170.11|AC006170 Drosophila melanogaster, chromosome 3R, region 98E2-98F2, BAC clone BACR48K07, complete sequence Length = 168471 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cggcgcagcagcagcagctg 272 |||||||||||||||||||| Sbjct: 56013 cggcgcagcagcagcagctg 55994
>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone BACR13A02, complete sequence Length = 166141 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tggcggcgcagcagcagcag 269 |||||||||||||||||||| Sbjct: 99948 tggcggcgcagcagcagcag 99929
>gb|AC007769.3|AC007769 Drosophila melanogaster, chromosome 3R, region 88F-88F, BAC clone BACR17K19, complete sequence Length = 167918 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tggcggcgcagcagcagcag 269 |||||||||||||||||||| Sbjct: 42 tggcggcgcagcagcagcag 23
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 91685 ggcggcgcagcagcagcagc 91666
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 gctgcacgcgcaggcggacc 288 |||||||||||||||||||| Sbjct: 5702363 gctgcacgcgcaggcggacc 5702344
>gb|AY087610.1| Arabidopsis thaliana clone 37036 mRNA, complete sequence Length = 1318 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 400 ggcggcgcagcagcagcagc 419
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 60271 ggcggcgcagcagcagcagc 60252
>dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0045A07 Length = 174165 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcagcagcagcagctgcacg 276 |||||||||||||||||||| Sbjct: 94776 gcagcagcagcagctgcacg 94757
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 tggtggcggcgcagcagcagcagc 270 |||||| ||||||||||||||||| Sbjct: 88349 tggtggtggcgcagcagcagcagc 88372
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 9402 ggcggcgcagcagcagcagc 9383
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 ggcgtcaaccctctcgcgcaggag 350 |||||||||| ||||||||||||| Sbjct: 111479 ggcgtcaaccgtctcgcgcaggag 111456
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 tcgcccagtgccgcctcaccggcg 330 ||||||||| |||||||||||||| Sbjct: 29011 tcgcccagttccgcctcaccggcg 29034
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 tcgcccagtgccgcctcaccggcg 330 ||||||||| |||||||||||||| Sbjct: 118364 tcgcccagttccgcctcaccggcg 118387
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgcacgcgcagg 282 ||||||| |||||||||||||||| |||||| Sbjct: 23863 ggcggcggcgcagcagcagctgcacccgcagg 23832
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgcacgcgcagg 282 ||||||| |||||||||||||||| |||||| Sbjct: 116486 ggcggcggcgcagcagcagctgcacccgcagg 116455
>dbj|AK121705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075B20, full insert sequence Length = 1786 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 186 ggcggcgcagcagcagcagc 205
>dbj|AK121646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058J23, full insert sequence Length = 2693 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 ggcgtcaaccctctcgcgcaggag 350 |||||||||| ||||||||||||| Sbjct: 1416 ggcgtcaaccgtctcgcgcaggag 1439
>dbj|AK119637.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F04, full insert sequence Length = 1765 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 185 ggcggcgcagcagcagcagc 204
>ref|XM_555727.1| Anopheles gambiae str. PEST ENSANGP00000026225 (ENSANGG00000025140), partial mRNA Length = 207 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cgcagcagcagcagctgcac 275 |||||||||||||||||||| Sbjct: 130 cgcagcagcagcagctgcac 111
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 69148 ggcggcgcagcagcagcagc 69167
>ref|XM_313040.2| Anopheles gambiae str. PEST ENSANGP00000011231 (ENSANGG00000008782), partial mRNA Length = 1473 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccagctccagcgcctcgtcg 306 |||||||||||||||||||| Sbjct: 31 ccagctccagcgcctcgtcg 12
>ref|XM_313039.2| Anopheles gambiae str. PEST ENSANGP00000022468 (ENSANGG00000008782), partial mRNA Length = 959 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccagctccagcgcctcgtcg 306 |||||||||||||||||||| Sbjct: 330 ccagctccagcgcctcgtcg 311
>ref|XM_312361.2| Anopheles gambiae str. PEST ENSANGP00000012170 (ENSANGG00000009681), partial mRNA Length = 2775 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 cggcgcagcagcagcagctgcacg 276 |||||||||||||||||| ||||| Sbjct: 1859 cggcgcagcagcagcagcagcacg 1882
>gb|AY894037.1| Synthetic construct Homo sapiens clone FLH130862.01L dynactin 3 (DCTN3) mRNA, partial cds Length = 561 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtgagccgcgcgccccgcc 90 |||||||||||||||||||| Sbjct: 92 cgtgagccgcgcgccccgcc 73
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 1687 ggcggcgcagcagcagcagc 1668
>dbj|AK102732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106A21, full insert sequence Length = 2417 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 186 ggcggcgcagcagcagcagc 205
>dbj|AK073085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C03, full insert sequence Length = 2181 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 cagcagcagcagctgcacgcgcag 281 ||||||||||||| |||||||||| Sbjct: 371 cagcagcagcagcagcacgcgcag 394
>dbj|AK070869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070E07, full insert sequence Length = 876 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 118 ggcggcgcagcagcagcagc 137
>gb|AF151693.1|AF151693 Oryza sativa transcription factor (MADS13) mRNA, complete cds Length = 1193 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 653 ggcggcgcagcagcagcagc 672
>dbj|AK070425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A03, full insert sequence Length = 1214 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 659 ggcggcgcagcagcagcagc 678
>dbj|AK070421.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M12, full insert sequence Length = 1473 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 767 ggcggcgcagcagcagcagc 786
>dbj|AK068946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J01, full insert sequence Length = 1331 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 164 ggcggcgcagcagcagcagc 183
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 29215 ggcggcgcagcagcagcagc 29234
>dbj|AK065116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O09, full insert sequence Length = 1757 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 178 ggcggcgcagcagcagcagc 197
>dbj|AK061739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E10, full insert sequence Length = 1772 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 320 ggcggcgcagcagcagcagc 339
>dbj|AK058941.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-H02, full insert sequence Length = 758 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 60 ggcggcgcagcagcagcagc 41
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 43577 ggcggcgcagcagcagcagc 43596
>gb|AY105684.1| Zea mays PCO121840 mRNA sequence Length = 1060 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gcgcagcagcagcagctgca 274 |||||||||||||||||||| Sbjct: 245 gcgcagcagcagcagctgca 264
>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete sequence Length = 236375 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tggcggcgcagcagcagcag 269 |||||||||||||||||||| Sbjct: 144380 tggcggcgcagcagcagcag 144361
>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the complete sequence Length = 231562 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cggcgcagcagcagcagctg 272 |||||||||||||||||||| Sbjct: 39114 cggcgcagcagcagcagctg 39095
>gb|AE003464.2| Drosophila melanogaster chromosome 2R, section 71 of 73 of the complete sequence Length = 310958 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 172819 ggcggcgcagcagcagcagc 172838
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcagcagcagcagctgcacg 276 |||||||||||||||||||| Sbjct: 120919 gcagcagcagcagctgcacg 120900
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cgcgcgccccgccgccaaac 97 |||||||||||||||||||| Sbjct: 182713 cgcgcgccccgccgccaaac 182694
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 ggcgcagcagcagcagctgc 273 |||||||||||||||||||| Sbjct: 738864 ggcgcagcagcagcagctgc 738845
>gb|AF082513.1|AF082513 Homo sapiens dynactin subunit (p22) mRNA, complete cds Length = 827 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtgagccgcgcgccccgcc 90 |||||||||||||||||||| Sbjct: 108 cgtgagccgcgcgccccgcc 89
>gb|U53456.1|MMU53456 Mus musculus protein phosphatase 1cgamma (PP1cgamma) mRNA, complete cds Length = 2294 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cgcagcagcagcagctgcacgcgc 279 ||||||||||||||| |||||||| Sbjct: 176 cgcagcagcagcagcagcacgcgc 153
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 cagcagcagcagctgcacgcgcag 281 ||||||||||||| |||||||||| Sbjct: 18735624 cagcagcagcagcagcacgcgcag 18735601
>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104421 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 40745 ggcggcgcagcagcagcagc 40726
>emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC OSJNBa0018E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69273 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 13703 ggcggcgcagcagcagcagc 13722
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 9004 ggcggcgcagcagcagcagc 8985
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 141538 ggcggcgcagcagcagcagc 141557
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 64152 ggcggcgcagcagcagcagc 64133
>gb|BC069262.1| Homo sapiens integrator complex subunit 1, mRNA (cDNA clone IMAGE:6378033), partial cds Length = 3030 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 2060 aggagatggctgctggggcattgt 2037
>gb|BC018777.1| Homo sapiens integrator complex subunit 1, mRNA (cDNA clone IMAGE:4869992), partial cds Length = 2418 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 1453 aggagatggctgctggggcattgt 1430
>gb|BC013367.2| Homo sapiens integrator complex subunit 1, mRNA (cDNA clone IMAGE:3677373), partial cds Length = 2760 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 1786 aggagatggctgctggggcattgt 1763
>gb|BC004286.1| Homo sapiens integrator complex subunit 1, mRNA (cDNA clone IMAGE:3618123), partial cds Length = 4179 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 3203 aggagatggctgctggggcattgt 3180
>emb|AL513424.3|HS109M15 Homo sapiens chromosome 9 BAC RP11-109M15, complete sequence Length = 184365 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 tggtggcggcgcagcagcagcagc 270 ||||||| |||||||||||||||| Sbjct: 94561 tggtggctgcgcagcagcagcagc 94584
>gb|AC002110.1|AC002110 Genomic sequence from Human 9q34, complete sequence Length = 30900 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcccgcgggcgccatggagc 180 |||||||||||||||||||| Sbjct: 3176 gcccgcgggcgccatggagc 3157
>gb|AC002104.1|AC002104 Genomic sequence from Human 9q34, complete sequence Length = 47036 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcccgcgggcgccatggagc 180 |||||||||||||||||||| Sbjct: 29037 gcccgcgggcgccatggagc 29018
>gb|AC000405.1|AC000405 Genomic sequence from Human 9q34, complete sequence Length = 38250 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gcccgcgggcgccatggagc 180 |||||||||||||||||||| Sbjct: 12638 gcccgcgggcgccatggagc 12657
>gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box protein (SbMADS2) mRNA, partial cds Length = 1186 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 702 ggcggcgcagcagcagcagc 721
>gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from clone y126 Length = 37164 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tcgtcgagtggggcggcgcg 230 |||||||||||||||||||| Sbjct: 13852 tcgtcgagtggggcggcgcg 13833
>gb|L46400.1|MZEMADSD Zea mays MADS-box protein (ZAP1) mRNA, complete cds Length = 1345 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagc 270 |||||||||||||||||||| Sbjct: 874 ggcggcgcagcagcagcagc 893
>ref|NM_024348.2| Homo sapiens dynactin 3 (p22) (DCTN3), transcript variant 2, mRNA Length = 947 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtgagccgcgcgccccgcc 90 |||||||||||||||||||| Sbjct: 127 cgtgagccgcgcgccccgcc 108
>ref|NM_007234.3| Homo sapiens dynactin 3 (p22) (DCTN3), transcript variant 1, mRNA Length = 846 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtgagccgcgcgccccgcc 90 |||||||||||||||||||| Sbjct: 127 cgtgagccgcgcgccccgcc 108
>gb|BC003111.1| Homo sapiens pre-B-cell leukemia transcription factor 2, mRNA (cDNA clone IMAGE:3501925), with apparent retained intron Length = 1370 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 427 ggcggctcagcagcagcagctgca 450
>emb|Y14823.1|DMSURF4 Drosophila melanogaster SURF-4 gene and gene encoding seryl-tRNA synthetase Length = 5991 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tggcggcgcagcagcagcag 269 |||||||||||||||||||| Sbjct: 5947 tggcggcgcagcagcagcag 5966
>gb|M27071.1|MUSDIS2M1A Mus musculus protein phosphatase type 1 (dis2m1) mRNA, complete cds Length = 1438 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cgcagcagcagcagctgcacgcgc 279 ||||||||||||||| |||||||| Sbjct: 180 cgcagcagcagcagcagcacgcgc 157
>gb|AC018450.26| Homo sapiens 3 BAC RP11-80H8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191474 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 16136 ggcggctcagcagcagcagctgca 16113
>dbj|D85137.1|MUSPIM1K Mouse mRNA for PP1gamma, complete cds Length = 2200 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cgcagcagcagcagctgcacgcgc 279 ||||||||||||||| |||||||| Sbjct: 84 cgcagcagcagcagcagcacgcgc 61
>dbj|D28769.1|HUMHOXRAGE Human HOX12 and RAGE genes, complete cds Length = 10108 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcggcgcagcagcagcagctgca 274 |||||| ||||||||||||||||| Sbjct: 2496 ggcggctcagcagcagcagctgca 2519
>dbj|AB037861.1| Homo sapiens mRNA for KIAA1440 protein, partial cds Length = 4434 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 aggagatggctgctggtgcattgt 369 |||||||||||||||| ||||||| Sbjct: 3490 aggagatggctgctggggcattgt 3467 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,853,396 Number of Sequences: 3902068 Number of extensions: 2853396 Number of successful extensions: 232040 Number of sequences better than 10.0: 213 Number of HSP's better than 10.0 without gapping: 226 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 226344 Number of HSP's gapped (non-prelim): 5645 length of query: 381 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 359 effective length of database: 17,147,199,772 effective search space: 6155844718148 effective search space used: 6155844718148 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)