>YIBL_AZOVI (P96194) Putative HTH-type transcriptional regulator in ibpB-leuC|
           intergenic region
          Length = 144

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +3

Query: 180 LRRLPPWRRTSPISARNWEWTRASLAR 260
           L RLPP    SP   R W WT AS  R
Sbjct: 103 LHRLPPCCAPSPAPIRRWRWTSASSIR 129

>CB024_PONPY (Q5R4U5) Protein C2orf24 homolog|
          Length = 410

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = +3

Query: 117 HAMHLKRRD*PHNSYNPWSRNLRRLPPWRRTSPISARNWEWTRASLARPRRC 272
           HA H   R  P    +PW       PPW          W    AS+ +P++C
Sbjct: 350 HACHHPNRTAPTALSSPWYHTYGLAPPW---------PWSPVPASIPQPQQC 392

>SUCC_CAUCR (Q9AB94) Succinyl-CoA synthetase beta chain (EC 6.2.1.5) (SCS-beta)|
          Length = 399

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 203 THFADLCKELGVDEGVASEAAALLEE 280
           TH   L K LG+  G+A EAA+LL +
Sbjct: 168 THHRALAKALGLTGGLAKEAASLLNQ 193


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,859,481
Number of Sequences: 219361
Number of extensions: 413285
Number of successful extensions: 1186
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)